View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0762-Insertion-10 (Length: 272)
Name: NF0762-Insertion-10
Description: NF0762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0762-Insertion-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 45083876 - 45084148
Alignment:
| Q |
8 |
attaattagtcaactttttccatgtattcgttgtttgtagctctatgttcatgtt-gaattttgaaaccactccttgtagaatcattttatattt--acc |
104 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
45083876 |
attaattagtcaactttttccatgtatttgttgtttgtagctctatgttcatgtttgaattttgaaaccactccttgtagaatcattttatatttttacc |
45083975 |
T |
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| Q |
105 |
tagatttgcagtgaattgtgaaagaactatacacaatacatttt-cattccacacacacaccc----gaatttgttagagaaggcttgctgtatttgaaa |
199 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||| |||||||||| |
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| T |
45083976 |
tagatttacagtgaattgtgaaagaactatacacaatacatttttcattgcacacacacacactccggaatttgttagagaaggcttgcggtatttgaaa |
45084075 |
T |
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| Q |
200 |
gcataatgcagcctgctttaatatctttttgttattgtgaactcaggaggaaaatttcaactgtggttaaggc |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45084076 |
gcataatgcagcctgctttaatatctttttgttattgtgaactcaggaggaaaatttcaactgtggttaaggc |
45084148 |
T |
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