View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0762_high_4 (Length: 250)
Name: NF0762_high_4
Description: NF0762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0762_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 8253420 - 8253196
Alignment:
| Q |
1 |
tcaacttcttgatgaaatgcatctgactgagaacttttagcatcaactactccacgaatggagtcaacactactgaatccccttcctgccaaggagacat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8253420 |
tcaacttcttgatgaaatgcatctgactgagaacttttagcatcaactactccacaaatggagtcaacactactgaatccccttcctgccaaggagacat |
8253321 |
T |
|
| Q |
101 |
cagtcgtcaaattttcatcgataggtatttccatatccgctgaaattgaactgcttagtccagtttcattgttggaattagctaagctgtctgcatatat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8253320 |
cagtcgtcaaattttcatcgataggtatttccatatcctctgaaattgaactgcttagtccagtttcattgttggaattagctaagctgtctgcatatat |
8253221 |
T |
|
| Q |
201 |
aaggcggtgatcccacatatatgat |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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|
| T |
8253220 |
aaggcggtgatcccacatatatgat |
8253196 |
T |
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