View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0763_high_11 (Length: 297)
Name: NF0763_high_11
Description: NF0763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0763_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 291
Target Start/End: Complemental strand, 36828329 - 36828051
Alignment:
| Q |
13 |
aatattgttaattgatcaactaactaaacttgataaaaataacttgtttaaactgtgtttaaccttttttaataaacatcttctacttctattaatctat |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
36828329 |
aatattgttaattgatcaactaactaaacttgataaaaataatttgtttaaactgtatttaaccttttttaataaacatcctctacttctattaatctat |
36828230 |
T |
|
| Q |
113 |
cttaagtttttcacattttccttcaaaggaatatnnnnnnnnnnnncaagcaatttggcagagaaccaaaaattctgacattgtcctacaaaagagttcc |
212 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36828229 |
cttaagtttttcacattttccttcaaaggaatataaaaaataaaaacaagcaatttggcagagaaccaaaaattctgacattgtcctacaaaagagttcc |
36828130 |
T |
|
| Q |
213 |
aatttttacataataaaccagtaactaaattgaagaatattccctatgacaaaatttgaagagcctatgtaaaacatta |
291 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36828129 |
aatttttacataataaaccagtaactaaattgaagaatattccctatgacaaaatttgaagagcctatgtaaaacatta |
36828051 |
T |
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