View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0763_low_13 (Length: 319)

Name: NF0763_low_13
Description: NF0763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0763_low_13
NF0763_low_13
[»] scaffold0367 (1 HSPs)
scaffold0367 (95-319)||(540-763)
[»] chr8 (35 HSPs)
chr8 (88-319)||(16410495-16410726)
chr8 (95-319)||(17926953-17927177)
chr8 (95-305)||(22010928-22011132)
chr8 (95-319)||(30643540-30643772)
chr8 (120-319)||(20856675-20856871)
chr8 (137-319)||(16861572-16861747)
chr8 (96-304)||(16184355-16184575)
chr8 (194-314)||(39095179-39095299)
chr8 (88-304)||(21168996-21169215)
chr8 (194-319)||(377014-377138)
chr8 (95-235)||(15611758-15611901)
chr8 (194-304)||(20466304-20466417)
chr8 (88-304)||(21162323-21162550)
chr8 (175-304)||(23777098-23777229)
chr8 (95-235)||(15603306-15603449)
chr8 (95-264)||(24755392-24755570)
chr8 (194-304)||(19982834-19982947)
chr8 (221-287)||(23913827-23913893)
chr8 (221-304)||(19898863-19898949)
chr8 (194-271)||(19259847-19259924)
chr8 (221-300)||(44385114-44385196)
chr8 (194-262)||(22873574-22873642)
chr8 (269-319)||(15603255-15603304)
chr8 (269-319)||(15611707-15611756)
chr8 (221-305)||(6520127-6520214)
chr8 (102-180)||(21829002-21829081)
chr8 (102-180)||(21973567-21973646)
chr8 (102-180)||(21977658-21977737)
chr8 (102-180)||(22111052-22111131)
chr8 (201-305)||(26355932-26356039)
chr8 (102-180)||(30941136-30941215)
chr8 (102-180)||(43250812-43250891)
chr8 (221-304)||(18818671-18818759)
chr8 (94-170)||(19898720-19898797)
chr8 (194-304)||(22626481-22626594)
[»] chr3 (56 HSPs)
chr3 (88-319)||(11298778-11299017)
chr3 (95-319)||(19726149-19726375)
chr3 (93-319)||(322234-322461)
chr3 (95-319)||(11848959-11849184)
chr3 (95-319)||(11862437-11862662)
chr3 (95-319)||(18384163-18384387)
chr3 (88-319)||(12172438-12172664)
chr3 (95-302)||(12495902-12496111)
chr3 (95-287)||(26196700-26196893)
chr3 (127-287)||(3403226-3403380)
chr3 (173-304)||(14878779-14878912)
chr3 (194-304)||(855881-855994)
chr3 (194-304)||(15067424-15067537)
chr3 (201-295)||(12852797-12852891)
chr3 (120-285)||(11557657-11557816)
chr3 (120-287)||(1983081-1983241)
chr3 (194-304)||(15878313-15878426)
chr3 (221-304)||(16796067-16796152)
chr3 (196-304)||(23408173-23408284)
chr3 (194-304)||(16369142-16369254)
chr3 (232-294)||(12038212-12038274)
chr3 (194-271)||(16909615-16909692)
chr3 (201-285)||(11595409-11595493)
chr3 (201-285)||(42325704-42325788)
chr3 (96-180)||(17318163-17318248)
chr3 (205-305)||(52523999-52524102)
chr3 (201-304)||(17499089-17499197)
chr3 (190-295)||(16097098-16097206)
chr3 (102-180)||(4108265-4108344)
chr3 (102-180)||(4112117-4112196)
chr3 (102-180)||(7108700-7108779)
chr3 (102-180)||(7112635-7112714)
chr3 (102-180)||(11166554-11166633)
chr3 (102-180)||(14159841-14159920)
chr3 (205-305)||(14234226-14234329)
chr3 (102-180)||(15616639-15616718)
chr3 (102-180)||(15963940-15964019)
chr3 (102-180)||(15967864-15967943)
chr3 (102-180)||(15971788-15971867)
chr3 (102-180)||(22320668-22320747)
chr3 (102-180)||(22335723-22335802)
chr3 (102-180)||(28948846-28948925)
chr3 (102-180)||(30064851-30064930)
chr3 (98-183)||(31097886-31097973)
chr3 (210-295)||(42386172-42386259)
chr3 (102-180)||(55021989-55022068)
chr3 (221-304)||(17487627-17487715)
chr3 (221-304)||(23083623-23083711)
chr3 (120-246)||(7793637-7793756)
chr3 (194-255)||(40214036-40214097)
chr3 (102-177)||(11069152-11069228)
chr3 (221-295)||(12174531-12174607)
chr3 (173-253)||(14872290-14872370)
chr3 (120-184)||(20461843-20461906)
chr3 (272-304)||(23077740-23077772)
chr3 (96-180)||(27411104-27411187)
[»] chr7 (29 HSPs)
chr7 (95-319)||(14429528-14429753)
chr7 (98-305)||(2759785-2759994)
chr7 (194-304)||(17138323-17138436)
chr7 (194-319)||(12321990-12322112)
chr7 (105-285)||(42203666-42203840)
chr7 (207-295)||(18301832-18301920)
chr7 (194-304)||(12186760-12186873)
chr7 (94-304)||(24054099-24054320)
chr7 (194-304)||(18155102-18155215)
chr7 (194-304)||(19649751-19649864)
chr7 (95-287)||(15580352-15580545)
chr7 (221-287)||(20487352-20487418)
chr7 (194-304)||(9703005-9703117)
chr7 (90-179)||(3271505-3271594)
chr7 (202-304)||(15211204-15211309)
chr7 (120-285)||(9446431-9446590)
chr7 (194-304)||(32216811-32216923)
chr7 (201-285)||(20569865-20569949)
chr7 (194-305)||(3564564-3564680)
chr7 (194-256)||(11858322-11858384)
chr7 (120-246)||(12317835-12317955)
chr7 (205-295)||(2282531-2282623)
chr7 (121-246)||(15605549-15605668)
chr7 (205-295)||(16056076-16056168)
chr7 (102-180)||(32110-32189)
chr7 (102-180)||(71833-71912)
chr7 (102-180)||(75942-76021)
chr7 (102-180)||(12705693-12705772)
chr7 (205-249)||(3271605-3271649)
[»] chr2 (34 HSPs)
chr2 (95-319)||(37524328-37524553)
chr2 (88-319)||(25963963-25964195)
chr2 (95-287)||(24716796-24716989)
chr2 (88-304)||(24679818-24680038)
chr2 (96-319)||(22812160-22812376)
chr2 (94-304)||(23019969-23020190)
chr2 (88-304)||(24673193-24673421)
chr2 (104-305)||(21318900-21319112)
chr2 (104-305)||(21327831-21328043)
chr2 (194-314)||(40428205-40428325)
chr2 (120-287)||(24174486-24174646)
chr2 (88-304)||(22799389-22799616)
chr2 (94-301)||(40622476-40622694)
chr2 (120-287)||(25961802-25961964)
chr2 (127-287)||(24655609-24655761)
chr2 (125-287)||(24869571-24869726)
chr2 (194-304)||(22741226-22741339)
chr2 (94-304)||(22758981-22759202)
chr2 (194-304)||(45678391-45678504)
chr2 (221-287)||(9784566-9784632)
chr2 (95-164)||(24703579-24703649)
chr2 (102-180)||(10102834-10102913)
chr2 (218-295)||(18787184-18787263)
chr2 (194-253)||(23031117-23031176)
chr2 (102-180)||(24629505-24629584)
chr2 (102-180)||(24648356-24648435)
chr2 (102-180)||(27380378-27380457)
chr2 (102-180)||(27384424-27384503)
chr2 (102-180)||(27600833-27600912)
chr2 (102-180)||(30346041-30346120)
chr2 (102-180)||(41531999-41532078)
chr2 (120-246)||(24735103-24735222)
chr2 (205-295)||(8014-8106)
chr2 (205-268)||(7679366-7679430)
[»] chr5 (41 HSPs)
chr5 (95-319)||(21366912-21367138)
chr5 (96-287)||(1859244-1859436)
chr5 (190-319)||(20805289-20805418)
chr5 (190-319)||(20766711-20766840)
chr5 (88-295)||(23439633-23439834)
chr5 (88-295)||(23451000-23451201)
chr5 (88-295)||(23458244-23458445)
chr5 (88-295)||(23462505-23462706)
chr5 (120-314)||(17919397-17919586)
chr5 (173-304)||(23511821-23511954)
chr5 (155-314)||(123557-123710)
chr5 (88-163)||(20766636-20766711)
chr5 (88-163)||(20805214-20805289)
chr5 (175-304)||(23201082-23201214)
chr5 (194-304)||(18770266-18770379)
chr5 (125-287)||(24221568-24221723)
chr5 (221-304)||(22032091-22032177)
chr5 (202-304)||(21873004-21873108)
chr5 (221-304)||(22107876-22107962)
chr5 (194-304)||(14078891-14079004)
chr5 (194-286)||(21887031-21887125)
chr5 (201-285)||(22756891-22756974)
chr5 (202-286)||(21877284-21877370)
chr5 (195-304)||(26703819-26703932)
chr5 (195-304)||(26973552-26973665)
chr5 (201-285)||(12028835-12028919)
chr5 (201-285)||(26680344-26680428)
chr5 (201-285)||(26951951-26952035)
chr5 (194-304)||(9077698-9077811)
chr5 (201-285)||(31341910-31341994)
chr5 (194-297)||(24528964-24529071)
chr5 (96-180)||(40724562-40724647)
chr5 (94-180)||(10752030-10752115)
chr5 (102-180)||(19473710-19473789)
chr5 (218-295)||(20027222-20027301)
chr5 (221-305)||(22959801-22959888)
chr5 (102-179)||(11219967-11220045)
chr5 (102-179)||(11224553-11224631)
chr5 (102-179)||(11228376-11228454)
chr5 (102-179)||(11230365-11230443)
chr5 (260-304)||(23571884-23571931)
[»] chr6 (42 HSPs)
chr6 (95-319)||(16523631-16523856)
chr6 (95-319)||(18692159-18692384)
chr6 (95-319)||(18180145-18180363)
chr6 (95-305)||(22408554-22408758)
chr6 (95-319)||(21830688-21830904)
chr6 (88-319)||(18906736-18906979)
chr6 (95-319)||(21766345-21766561)
chr6 (176-304)||(15894699-15894830)
chr6 (191-304)||(21740293-21740412)
chr6 (194-304)||(19872862-19872975)
chr6 (194-304)||(19862720-19862833)
chr6 (205-287)||(20908252-20908334)
chr6 (202-304)||(22335159-22335264)
chr6 (194-304)||(25642449-25642562)
chr6 (120-285)||(27567882-27568041)
chr6 (202-304)||(22431999-22432104)
chr6 (202-304)||(22438549-22438654)
chr6 (221-287)||(22074470-22074536)
chr6 (201-285)||(19791049-19791132)
chr6 (152-285)||(27553844-27553970)
chr6 (194-304)||(31165102-31165212)
chr6 (221-304)||(16960285-16960368)
chr6 (96-180)||(16759232-16759317)
chr6 (194-286)||(16965591-16965684)
chr6 (221-268)||(2077028-2077075)
chr6 (201-305)||(22080998-22081105)
chr6 (201-304)||(25629617-25629723)
chr6 (194-304)||(20638547-20638662)
chr6 (201-304)||(22831258-22831360)
chr6 (96-180)||(23394063-23394148)
chr6 (194-262)||(15041804-15041872)
chr6 (194-246)||(27325902-27325954)
chr6 (102-180)||(11565863-11565942)
chr6 (102-180)||(12619868-12619947)
chr6 (102-180)||(19869630-19869709)
chr6 (102-180)||(22948118-22948197)
chr6 (102-180)||(22952074-22952153)
chr6 (102-180)||(23413977-23414056)
chr6 (102-180)||(23870562-23870641)
chr6 (102-180)||(23874518-23874597)
chr6 (102-180)||(23988961-23989040)
chr6 (94-180)||(31479243-31479328)
[»] chr1 (32 HSPs)
chr1 (88-319)||(3473170-3473401)
chr1 (95-319)||(18182367-18182598)
chr1 (125-319)||(8761877-8762072)
chr1 (95-319)||(17678833-17679051)
chr1 (194-319)||(20091724-20091848)
chr1 (194-304)||(22831647-22831757)
chr1 (175-304)||(21788306-21788438)
chr1 (194-319)||(22449514-22449639)
chr1 (194-304)||(6151590-6151703)
chr1 (120-283)||(3705340-3705496)
chr1 (194-304)||(22468964-22469077)
chr1 (194-304)||(21714289-21714402)
chr1 (194-300)||(42865480-42865589)
chr1 (221-304)||(22131345-22131430)
chr1 (221-287)||(41781782-41781848)
chr1 (194-271)||(21022322-21022399)
chr1 (221-300)||(48603037-48603119)
chr1 (201-285)||(33050286-33050370)
chr1 (201-305)||(33680750-33680857)
chr1 (120-285)||(18394235-18394394)
chr1 (201-305)||(21753791-21753898)
chr1 (201-305)||(22922139-22922246)
chr1 (194-295)||(34509524-34509629)
chr1 (94-180)||(52634787-52634874)
chr1 (201-295)||(20248025-20248121)
chr1 (102-180)||(1009724-1009803)
chr1 (102-180)||(1926179-1926258)
chr1 (102-180)||(20925193-20925272)
chr1 (214-285)||(45490013-45490081)
chr1 (120-246)||(21172712-21172831)
chr1 (194-255)||(50210534-50210595)
chr1 (120-184)||(36819640-36819704)
[»] scaffold0037 (2 HSPs)
scaffold0037 (95-319)||(21772-21998)
scaffold0037 (201-305)||(22940-23047)
[»] scaffold1296 (1 HSPs)
scaffold1296 (88-319)||(34-265)
[»] chr4 (36 HSPs)
chr4 (95-319)||(16348911-16349136)
chr4 (95-319)||(16357199-16357424)
chr4 (88-319)||(16488325-16488556)
chr4 (95-319)||(5339224-5339442)
chr4 (88-300)||(15093402-15093625)
chr4 (176-304)||(12569739-12569870)
chr4 (95-304)||(15122063-15122283)
chr4 (105-287)||(15353577-15353753)
chr4 (205-287)||(13813450-13813532)
chr4 (194-295)||(12423446-12423547)
chr4 (201-292)||(631243-631334)
chr4 (194-304)||(23843219-23843332)
chr4 (194-304)||(15125304-15125417)
chr4 (221-304)||(17048574-17048659)
chr4 (96-249)||(13818051-13818198)
chr4 (194-304)||(44675373-44675486)
chr4 (194-304)||(13569244-13569356)
chr4 (190-285)||(11250831-11250927)
chr4 (201-282)||(25555244-25555324)
chr4 (96-179)||(13813543-13813627)
chr4 (201-287)||(16352122-16352206)
chr4 (248-295)||(13813353-13813400)
chr4 (246-287)||(13817961-13818002)
chr4 (205-295)||(14132-14224)
chr4 (201-304)||(14053565-14053673)
chr4 (205-295)||(12288492-12288584)
chr4 (102-180)||(5757836-5757915)
chr4 (102-180)||(9555531-9555610)
chr4 (102-180)||(12486686-12486765)
chr4 (102-180)||(14758452-14758531)
chr4 (102-180)||(14955217-14955296)
chr4 (102-180)||(25688904-25688983)
chr4 (102-180)||(33741301-33741380)
chr4 (221-305)||(39706564-39706651)
chr4 (120-184)||(36134282-36134345)
chr4 (221-295)||(52243477-52243553)
[»] scaffold0476 (2 HSPs)
scaffold0476 (88-314)||(5230-5458)
scaffold0476 (88-314)||(6425-6653)
[»] scaffold0104 (2 HSPs)
scaffold0104 (95-319)||(1473-1699)
scaffold0104 (95-319)||(9156-9382)
[»] scaffold0124 (2 HSPs)
scaffold0124 (88-305)||(42273-42484)
scaffold0124 (201-295)||(25082-25177)
[»] scaffold1326 (1 HSPs)
scaffold1326 (95-319)||(1729-1945)
[»] scaffold0280 (1 HSPs)
scaffold0280 (95-319)||(19536-19754)
[»] scaffold1220 (1 HSPs)
scaffold1220 (95-314)||(1451-1664)
[»] scaffold0216 (1 HSPs)
scaffold0216 (95-319)||(17359-17591)
[»] scaffold0311 (1 HSPs)
scaffold0311 (95-319)||(7378-7610)
[»] scaffold0035 (1 HSPs)
scaffold0035 (94-319)||(46977-47210)
[»] scaffold0093 (1 HSPs)
scaffold0093 (88-304)||(5069-5296)
[»] scaffold0185 (1 HSPs)
scaffold0185 (95-319)||(33194-33420)
[»] scaffold0080 (2 HSPs)
scaffold0080 (95-303)||(16740-16942)
scaffold0080 (221-304)||(18977-19062)
[»] scaffold0412 (2 HSPs)
scaffold0412 (194-319)||(6653-6777)
scaffold0412 (95-246)||(14036-14189)
[»] scaffold0673 (2 HSPs)
scaffold0673 (104-235)||(8217-8349)
scaffold0673 (263-319)||(8351-8407)
[»] scaffold0015 (1 HSPs)
scaffold0015 (120-314)||(195168-195356)
[»] scaffold0003 (1 HSPs)
scaffold0003 (95-287)||(414318-414506)
[»] scaffold0017 (3 HSPs)
scaffold0017 (194-314)||(15465-15585)
scaffold0017 (194-314)||(19987-20107)
scaffold0017 (194-304)||(193239-193352)
[»] scaffold0615 (1 HSPs)
scaffold0615 (95-319)||(2332-2543)
[»] scaffold0022 (1 HSPs)
scaffold0022 (207-319)||(74014-74126)
[»] scaffold0346 (1 HSPs)
scaffold0346 (194-319)||(14832-14957)
[»] scaffold0023 (2 HSPs)
scaffold0023 (120-304)||(38742-38936)
scaffold0023 (120-182)||(29183-29245)
[»] scaffold0008 (1 HSPs)
scaffold0008 (88-264)||(34146-34317)
[»] scaffold1276 (1 HSPs)
scaffold1276 (173-304)||(1998-2131)
[»] scaffold0393 (2 HSPs)
scaffold0393 (95-318)||(1136-1362)
scaffold0393 (284-319)||(1267-1302)
[»] scaffold0036 (1 HSPs)
scaffold0036 (201-314)||(68627-68740)
[»] scaffold0042 (1 HSPs)
scaffold0042 (104-304)||(35180-35392)
[»] scaffold0342 (1 HSPs)
scaffold0342 (120-314)||(7525-7714)
[»] scaffold0001 (3 HSPs)
scaffold0001 (194-287)||(422802-422895)
scaffold0001 (175-300)||(204607-204733)
scaffold0001 (120-183)||(173004-173067)
[»] scaffold0005 (1 HSPs)
scaffold0005 (194-304)||(281158-281271)
[»] scaffold0550 (1 HSPs)
scaffold0550 (95-287)||(7135-7321)
[»] scaffold0158 (2 HSPs)
scaffold0158 (205-304)||(2585-2687)
scaffold0158 (205-304)||(6251-6353)
[»] scaffold0081 (3 HSPs)
scaffold0081 (175-304)||(23402-23533)
scaffold0081 (175-303)||(14386-14516)
scaffold0081 (175-303)||(38826-38956)
[»] scaffold0181 (1 HSPs)
scaffold0181 (120-314)||(27377-27566)
[»] scaffold0096 (1 HSPs)
scaffold0096 (194-304)||(16611-16724)
[»] scaffold0676 (1 HSPs)
scaffold0676 (194-295)||(4173-4275)
[»] scaffold0289 (1 HSPs)
scaffold0289 (90-249)||(2241-2393)
[»] scaffold0142 (1 HSPs)
scaffold0142 (201-295)||(8077-8171)
[»] scaffold0439 (2 HSPs)
scaffold0439 (105-287)||(10566-10741)
scaffold0439 (201-287)||(2706-2791)
[»] scaffold0297 (2 HSPs)
scaffold0297 (194-304)||(10780-10893)
scaffold0297 (194-304)||(15941-16053)
[»] scaffold0210 (2 HSPs)
scaffold0210 (194-304)||(22067-22180)
scaffold0210 (194-304)||(29959-30072)
[»] scaffold0111 (1 HSPs)
scaffold0111 (194-304)||(32188-32301)
[»] scaffold0102 (1 HSPs)
scaffold0102 (194-304)||(48708-48821)
[»] scaffold0165 (3 HSPs)
scaffold0165 (221-304)||(3287-3372)
scaffold0165 (221-304)||(7350-7436)
scaffold0165 (218-295)||(27993-28072)
[»] scaffold0101 (1 HSPs)
scaffold0101 (94-304)||(9225-9446)
[»] scaffold0273 (1 HSPs)
scaffold0273 (218-304)||(10260-10349)
[»] scaffold0149 (2 HSPs)
scaffold0149 (194-304)||(3483-3596)
scaffold0149 (194-304)||(7914-8027)
[»] scaffold0043 (1 HSPs)
scaffold0043 (194-304)||(17978-18091)
[»] scaffold0031 (2 HSPs)
scaffold0031 (94-304)||(66059-66280)
scaffold0031 (120-246)||(53265-53384)
[»] scaffold0004 (1 HSPs)
scaffold0004 (194-304)||(69536-69649)
[»] scaffold1873 (1 HSPs)
scaffold1873 (201-287)||(1014-1100)
[»] scaffold0410 (1 HSPs)
scaffold0410 (105-285)||(1842-2015)
[»] scaffold1124 (1 HSPs)
scaffold1124 (225-304)||(1652-1734)
[»] scaffold0114 (1 HSPs)
scaffold0114 (221-304)||(7064-7150)
[»] scaffold0671 (1 HSPs)
scaffold0671 (194-304)||(5836-5949)
[»] scaffold0174 (1 HSPs)
scaffold0174 (194-304)||(18717-18830)
[»] scaffold0819 (1 HSPs)
scaffold0819 (194-271)||(1865-1942)
[»] scaffold0305 (2 HSPs)
scaffold0305 (201-285)||(4660-4743)
scaffold0305 (199-304)||(20417-20527)
[»] scaffold0574 (1 HSPs)
scaffold0574 (194-304)||(8079-8191)
[»] scaffold0575 (1 HSPs)
scaffold0575 (221-287)||(6375-6441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (221-304)||(19750-19836)
[»] scaffold0484 (1 HSPs)
scaffold0484 (221-300)||(415-497)
[»] scaffold0261 (1 HSPs)
scaffold0261 (194-304)||(1081-1194)
[»] scaffold0131 (1 HSPs)
scaffold0131 (202-304)||(36205-36310)
[»] scaffold0637 (1 HSPs)
scaffold0637 (201-285)||(8323-8407)
[»] scaffold0327 (1 HSPs)
scaffold0327 (221-287)||(48-114)
[»] scaffold0184 (1 HSPs)
scaffold0184 (201-285)||(4473-4557)
[»] scaffold0198 (1 HSPs)
scaffold0198 (194-304)||(23587-23700)
[»] scaffold0056 (2 HSPs)
scaffold0056 (231-304)||(14349-14425)
scaffold0056 (194-304)||(17483-17598)
[»] scaffold0020 (1 HSPs)
scaffold0020 (194-264)||(178642-178712)
[»] scaffold0173 (1 HSPs)
scaffold0173 (194-262)||(995-1063)
[»] scaffold0075 (1 HSPs)
scaffold0075 (205-295)||(53830-53922)
[»] scaffold0029 (2 HSPs)
scaffold0029 (242-304)||(12551-12616)
scaffold0029 (102-179)||(79574-79652)
[»] scaffold0014 (1 HSPs)
scaffold0014 (201-285)||(205333-205417)
[»] scaffold0064 (1 HSPs)
scaffold0064 (194-255)||(65022-65083)
[»] scaffold0621 (2 HSPs)
scaffold0621 (201-305)||(1859-1966)
scaffold0621 (201-305)||(6276-6383)
[»] scaffold0556 (1 HSPs)
scaffold0556 (221-305)||(6582-6669)
[»] scaffold0525 (1 HSPs)
scaffold0525 (102-180)||(4884-4963)
[»] scaffold0349 (1 HSPs)
scaffold0349 (94-180)||(11495-11582)
[»] scaffold0157 (1 HSPs)
scaffold0157 (102-180)||(33712-33791)
[»] scaffold0141 (1 HSPs)
scaffold0141 (102-180)||(15146-15225)
[»] scaffold0061 (1 HSPs)
scaffold0061 (102-180)||(68206-68285)
[»] scaffold0218 (1 HSPs)
scaffold0218 (218-305)||(8343-8433)
[»] scaffold0120 (1 HSPs)
scaffold0120 (98-181)||(20346-20431)
[»] scaffold0130 (1 HSPs)
scaffold0130 (221-295)||(27649-27725)
[»] scaffold0046 (2 HSPs)
scaffold0046 (194-246)||(1739-1791)
scaffold0046 (194-246)||(4294-4346)
[»] scaffold0034 (1 HSPs)
scaffold0034 (221-295)||(32297-32373)


Alignment Details
Target: scaffold0367 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 540 - 763
Alignment:
Q  95 caacataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaa 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||    
T  540 caacataatcatcttaaacatcatacatcttggataatcaaatatcaagtactcgtttcattcaatcataataaataacataacatctttcatcatttaa 639  T
Q  195 ctcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggca 294  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  640 ctcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatttagggcatgagcccccaacattatagtattaatatactttcagggca 739  T
Q  295 taagcccccaagaattattttgagc 319  Q
    ||| ||||||| |||||||||||||    
T  740 taa-cccccaacaattattttgagc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 8e-95; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 88 - 319
Target Start/End: Complemental strand, 16410726 - 16410495
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcat 187  Q
    ||||| |||||||  ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16410726 acatcttcaacatggtcaccttaaacattatacatctttggtaatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcat 16410627  T
Q  188 tgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
      |||||||||||||||||||||||||| |||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16410626 catttaactcgacaatgcgacaatgcaacctaaacctcttatatgaatgtggtaccaattcagggcatgagcccccaacattatagtattaatatacttt 16410527  T
Q  288 cagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||| | |||||||||||    
T  16410526 cagggcataagcccccaacagttattttgagc 16410495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 17927177 - 17926953
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||  ||||||| ||||| |||||||||||| ||| ||||||||||||| |||| ||||||  ||||||||||   ||     
T  17927177 caacataaacatcttaaacatcattgcatctttaataataaaatatcaagtaatcacttcattcaatcatcataactaacattgcatctttcatcaattg 17927078  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  17927077 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcctccagcattatagtattaatatactttcagggc 17926978  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    ||||||||||||  ||||||||||||    
T  17926977 ataagcccccaa-cattattttgagc 17926953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 95 - 305
Target Start/End: Complemental strand, 22011132 - 22010928
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||||||||||||||||| || |||||| ||||||||||       |     
T  22011132 caacataaacatcttaaacatcatatcatcattgataataaaatatcaagtagtcatttcattcaatcatcatcaataacttaacatcttt-------tg 22011040  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22011039 actcaacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccagcattatagtattaatatactttcagggc 22010940  T
Q  294 ataagcccccaa 305  Q
    ||||||||||||    
T  22010939 ataagcccccaa 22010928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 30643772 - 30643540
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--------tc 185  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||        ||    
T  30643772 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcattataaataacataacatcttaacatctttc 30643673  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  30643672 atcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacagtttagtattaatatact 30643573  T
Q  286 ttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||||  ||||||||||||    
T  30643572 ttcagggcataagcccccaa-cattattttgagc 30643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 20856871 - 20856675
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaatgcgacaatgcaatcta 219  Q
    |||||||||||| ||| ||||||||| |||  |||||||||||| || ||||||||||||| |||     ||||||||||||||| |||||||||| |||    
T  20856871 catctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatttttt----tttaactcgacaatgagacaatgcaaccta 20856776  T
Q  220 aacctcttatatgcatctggtgccaattcagggcatgagcccccaaca-ttatagtattaatatactttcagggcataagcccccaagaattattttgag 318  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  20856775 aacctcttatatgcatgtggtaccaatacaaggcatgagcccccaacagtttaagtattaatatactttcagggcataagcccccaacaattattttgag 20856676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 137 - 319
Target Start/End: Complemental strand, 16861747 - 16861572
Alignment:
Q  137 tatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatc 236  Q
    ||||||| | ||| ||||||||||||| || || ||||||||||||||       | ||||||||||| |||||||||| |||||||||||||||||||     
T  16861747 tatcaagcaatcacttcattcaatcatcatcaacaacataacatcttt-------tgactcgacaatgtgacaatgcaacctaaacctcttatatgcatg 16861655  T
Q  237 tggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattttgagc 319  Q
    ||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16861654 tggtatcaattcagggcatgagcccccaacagtttagtattaatatactttcagggcataagcccccaacaattattttgagc 16861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 96 - 304
Target Start/End: Original strand, 16184355 - 16184575
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataac--------atctttca 186  Q
    ||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||| ||  || ||||||||||||||        ||||||||    
T  16184355 aacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcatttaaagatcataaataacataacatcttaacatctttca 16184454  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatata 283  Q
    |  ||||| ||||||||||||||||||||  || || |||||||||||| |||| ||||||||||||||||||||||||| ||||   |||||||||||     
T  16184455 tcatttaagtcgacaatgcgacaatgcaacttagacatcttatatgcatgtggtaccaattcagggcatgagcccccaacgttatttgagtattaatatt 16184554  T
Q  284 ctttcagggcataagccccca 304  Q
    ||| |||||||||||||||||    
T  16184555 cttccagggcataagccccca 16184575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 39095299 - 39095179
Alignment:
Q  194 actcgacaatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  39095299 actcgacaatgcgacaatgcaaatctaaacctcttatatgcatgtggtaccaat-cagggcatgagcccccaacagtttagtattaatatactttcaggg 39095201  T
Q  293 cataagcccccaagaattattt 314  Q
    ||||||||||||| ||||||||    
T  39095200 cataagcccccaacaattattt 39095179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 304
Target Start/End: Complemental strand, 21169215 - 21168996
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| ||||||||| ||||||||||||| || |||| | |||||| | |||||||||| ||| |||||| || |||  ||| | |||||||||||||||    
T  21169215 acatcttcaacataagcatcttaaacatcttagcatcatagataataatatatcaagtaatcacttcattaaagcatcgtaattcacataacatctttca 21169116  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatac 284  Q
    || ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| | ||| || |||||||||||||| | ||||  |||||||||||||    
T  21169115 ttatttgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtactaatacatggcatgagcccccatcgttattgagtattaatatac 21169016  T
Q  285 tttcagggcataagccccca 304  Q
    || |||||||||||||||||    
T  21169015 ttccagggcataagccccca 21168996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 377014 - 377138
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  377014 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattttagtattaatatactttcaaggc 377113  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    || |||||||||  ||||||||||||    
T  377114 atgagcccccaa-cattattttgagc 377138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 15611901 - 15611758
Alignment:
Q  95 caacataatcatcttaaa-catcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt-tcattgtt 191  Q
    |||||||| ||||||||| ||||||| |||| |||||||| |||||||||||| ||| |||||||||| || |||||||||||||||||||  |||   |    
T  15611901 caacataaacatcttaaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaattatcataaataacataacatcttaacatcaat 15611802  T
Q  192 taactcgacaatgcgacaatgcaatctaaacctcttatatgcat 235  Q
    | |||||||||||||||||||||| |||||||||||||||||||    
T  15611801 tgactcgacaatgcgacaatgcaacctaaacctcttatatgcat 15611758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 20466417 - 20466304
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||||||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||| |||||||||   | ||||||||||||||||||    
T  20466417 actcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcctccaacattatttttgtattaatatactttcag 20466318  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  20466317 ggcataagccccca 20466304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 88 - 304
Target Start/End: Complemental strand, 21162550 - 21162323
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataa-----ataacat---aac 178  Q
    ||||| ||||||||| ||||||||||||| || |||| | |||||| | |||||||||| ||| |||||| || |||  |||     |||||||   |||    
T  21162550 acatcttcaacataagcatcttaaacatcttagcatcatagataataatatatcaagtaatcacttcattaaagcatcgtaattcacataacatcttaac 21162451  T
Q  179 atctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtat 276  Q
    |||||||||| ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||   ||||    
T  21162450 atctttcattatttgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattgggtat 21162351  T
Q  277 taatatactttcagggcataagccccca 304  Q
    |||||||||| || ||||||||||||||    
T  21162350 taatatacttccaaggcataagccccca 21162323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 23777229 - 23777098
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--a 272  Q
    |||||||||||||| ||| ||||||  ||| ||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| ||||||  |    
T  23777229 taacatctttcattatttgactcgagtatgggacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcattattga 23777130  T
Q  273 gtattaatatactttcagggcataagccccca 304  Q
    |||||||||||||| || ||||||||||||||    
T  23777129 gtattaatatacttccaaggcataagccccca 23777098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 15603449 - 15603306
Alignment:
Q  95 caacataatcatcttaaa-catcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatc-tttcattgtt 191  Q
    |||||||| ||||||||| ||||||| |||| |||||||| |||||||||||| ||| |||||||||| || ||||||||||||||||| |  |||   |    
T  15603449 caacataaacatcttaaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaattatcataaataacataacatcataacatcaat 15603350  T
Q  192 taactcgacaatgcgacaatgcaatctaaacctcttatatgcat 235  Q
    | |||||||||||||||||||||| |||||||||||||||||||    
T  15603349 tgactcgacaatgcgacaatgcaacctaaacctcttatatgcat 15603306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 264
Target Start/End: Original strand, 24755392 - 24755570
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataac--------atctttc 185  Q
    |||||||| ||||||||| ||| || |||| |||||||| |||||||||||| ||| |||||| || ||| | ||||||| ||||        |||||||    
T  24755392 caacataaacatcttaaatatcgtagcatcattgataataaaatatcaagtaatcacttcatttaaacatcacaaataacctaacattttaacatctttc 24755491  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagccccca 264  Q
    ||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| ||||| |||||| ||||||||||    
T  24755492 atcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcttgagccccca 24755570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 19982834 - 19982947
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || |||||||||| |||| |||| |||||||||||| |||||||||| | ||||   ||||||||||||||| |||    
T  19982834 actcgactatgcgactatgcaacttagacctcttataggcatgtggtaccaattcagggcctgagcccccatcgttatttgagtattaatatacttccag 19982933  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  19982934 ggcataagccccca 19982947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 23913827 - 23913893
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  23913827 acctcttatatgcatgtggtaccaatacagggcatgagcccccaacatcatagtattaatatacttt 23913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 19898863 - 19898949
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||| | ||||   ||||||||||||||| |||||||||||||||||    
T  19898863 acctcttatatgcatgtggtaccaattcagggcatgcgcccccatcgttatttgagtattaatatacttccagggcataagccccca 19898949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 19259924 - 19259847
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat 271  Q
    ||||||| ||||||| ||||||  || ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  19259924 actcgactatgcgactatgcaacttagacctcttatatgcacgtggtaccaattcagggcatgagcccccaacattat 19259847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 44385196 - 44385114
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataagcc 300  Q
    ||||||||||||||| |||| |||||| |||||||||||||||| | ||||   ||||||||||||||| |||||||||||||    
T  44385196 acctcttatatgcatgtggtaccaattaagggcatgagcccccatcgttatttgagtattaatatacttccagggcataagcc 44385114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 22873642 - 22873574
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccc 262  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||    
T  22873642 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccc 22873574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 15603304 - 15603255
Alignment:
Q  269 tatagtattaatatactttcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  15603304 tatagtattaatatactttcagggcataagcccccaa-cattattttgagc 15603255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 15611756 - 15611707
Alignment:
Q  269 tatagtattaatatactttcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  15611756 tatagtattaatatactttcagggcataagcccccaa-cattattttgagc 15611707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 6520127 - 6520214
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatga-gcccccaacattata-gtattaatatactttcagggcat-aagcccccaa 305  Q
    ||||||||||||||| |||| ||||| |||||||| | |||| |||| | ||| ||||||||||||||||||||||| ||||||||||    
T  6520127 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatactttcagggcatcaagcccccaa 6520214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 21829081 - 21829002
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  21829081 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 21829002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 21973646 - 21973567
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  21973646 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcattatcaataacataacat 21973567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 21977737 - 21977658
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  21977737 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 21977658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 22111052 - 22111131
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  22111052 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 22111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 26356039 - 26355932
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatga-gcccccaacattata-gtattaatatactttcagggcat-aa 297  Q
    ||||| || ||||||  |||||||||| ||||||| |||| ||||| |||||||| | |||| |||| | ||| |||||||||||||| |||||||| ||    
T  26356039 aatgcaactatgcaacttaaacctcttgtatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaa 26355940  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  26355939 gcccccaa 26355932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 30941215 - 30941136
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  30941215 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 30941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 43250812 - 43250891
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  43250812 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 43250891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 18818759 - 18818671
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat---agtattaatatactttcagggcat-aagccccca 304  Q
    ||||||||||||||| |||| ||||| ||||||||  |||||||| || |||   ||||||||||||||| |||||||| |||||||||    
T  18818759 acctcttatatgcatgtggtaccaatacagggcatcaagcccccatcactatttgagtattaatatacttccagggcatcaagccccca 18818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 19898720 - 19898797
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaat 170  Q
    ||||||||| |||||||||||||||| |||| | |||||| | |||||||||| ||| |||||| || ||| ||||||    
T  19898720 tcaacataagcatcttaaacatcatagcatcatagataataatatatcaagtaatcacttcatttaaacatcataaat 19898797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 22626481 - 22626594
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagg 291  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| || |||||  |||||||| |  ||| ||||||| ||||||| ||||    
T  22626481 actcgacaatgtgactatgcaacatagacctcttatatgcatgtggtaccaatccaaggcatcaagcccccatcgctataagtattattatacttccagg 22626580  T
Q  292 gcat-aagccccca 304  Q
    |||| |||||||||    
T  22626581 gcatcaagccccca 22626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 88 - 319
Target Start/End: Complemental strand, 11299017 - 11298778
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcat 187  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11299017 acatcttcaatataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttctttcaatcataataaataacataacatctttcat 11298918  T
Q  188 tgtttaactcgacaatgcgacaatgca--------atctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaa 279  Q
      |||||||||||||||||||||||||        | ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||     
T  11298917 catttaactcgacaatgcgacaatgcaacaatgcgacctaaacctcttatatgcatgtggtaccaattcaggacatgagcccccaacattatagtattat 11298818  T
Q  280 tatactttcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  11298817 tatactttcagggcataagcccccaacaattattttgagc 11298778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 19726375 - 19726149
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||  |||  |||    
T  19726375 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacatcttaacatcattt 19726276  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19726275 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 19726176  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    ||||||||||||| |||||||||||||    
T  19726175 cataagcccccaacaattattttgagc 19726149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 93 - 319
Target Start/End: Original strand, 322234 - 322461
Alignment:
Q  93 atcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtt 191  Q
    |||||||||| |||||||||||||||  |||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||   |    
T  322234 atcaacataaacatcttaaacatcattgcatctttgataatcaaatgtcaagtaatcacttcattcaatcatcataaataacataacatctttcatcaat 322333  T
Q  192 taactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagg 291  Q
    | |||||||||||||||||||||| ||||||||||||||||||| |||| |||||  |||||||||||||||| |||||||||||||||||||||||| |    
T  322334 tgactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatatagggcatgagcccccagcattatagtattaatatactttcacg 322433  T
Q  292 gcataagcccccaagaattattttgagc 319  Q
    |||||||||||||| |||||||||||||    
T  322434 gcataagcccccaacaattattttgagc 322461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 11848959 - 11849184
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| |||| ||||||||| || ||||||| |||||||||||||||   ||     
T  11848959 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcatctcattcaatgatcataaatatcataacatctttcatcaattg 11849058  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||||||||||||||||||  || ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11849059 actcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 11849158  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| | |||||||||||    
T  11849159 ataagcccccaacagttattttgagc 11849184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 11862437 - 11862662
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| |||| | |||||||||| ||||||| |||||||||||||||   ||     
T  11862437 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcatctaattcaatcatcataaatatcataacatctttcatcaattg 11862536  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  11862537 actcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagccctcatcattatagtattaatatactttcagggc 11862636  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| | |||||||||||    
T  11862637 ataagcccccaacagttattttgagc 11862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 18384387 - 18384163
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||   ||     
T  18384387 caacataaacatcttaaacatcattgcatctttgacaatcaaatatcaagtaatcacttcattcaatcatcataaataa-attacatctttcatcaattg 18384289  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||  ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18384288 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggaaccaatacagggcatgagcccccagcattatagtattaatatactttcagggc 18384189  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||| ||||||| |||||||||||||    
T  18384188 ataaacccccaacaattattttgagc 18384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 88 - 319
Target Start/End: Original strand, 12172438 - 12172664
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| ||||||||| ||||||||| |||||| |||| |||||||| |||||| ||||| ||| | ||||||||||| ||||||||     |||||||||    
T  12172438 acatcttcaacataagcatcttaaatatcatagcatcattgataataaaatattaagtaatcactccattcaatcatcataaataa-----catctttca 12172532  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
    || ||| |||||||||||||| |||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||    
T  12172533 ttatttgactcgacaatgcgagaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattttaatattaatatactt 12172632  T
Q  287 tcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||  ||||||||||||    
T  12172633 tcagggcataagcccccaa-cattattttgagc 12172664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 302
Target Start/End: Original strand, 12495902 - 12496111
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||  |||| |||||||| |||||||||||| ||| |||||||||| || |||||||||||||||||||  |||  |||    
T  12495902 caacataaacatcttaaacatcattgcatcattgataataaaatatcaagtaatcacttcattcaattatcataaataacataacatcttaacatcattt 12496001  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     ||||||||||||| |||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||    
T  12496002 gactcgacaatgcggcaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccagcattatagtattaatatacttttaggg 12496101  T
Q  293 cataagcccc 302  Q
     |||| ||||    
T  12496102 tataaccccc 12496111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 287
Target Start/End: Complemental strand, 26196893 - 26196700
Alignment:
Q  95 caacataatcatcttaaacatcatac-atctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| ||||||||||||||||  ||| |||||||| |||||||||||| ||| ||||||||||||| ||||| |||||||||||||||||   ||     
T  26196893 caacataaacatcttaaacatcatagtatcattgataataaaatatcaagtaatcacttcattcaatcatcataaacaacataacatctttcataaattg 26196794  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||| ||||||||||  || ||||||||||||||| |||| |||||  |||||||||||||||||||| ||||||||||||||||||    
T  26196793 actcgacaatgagacaatgcaacttagacctcttatatgcatgtggtaccaataaagggcatgagcccccaacatcatagtattaatatacttt 26196700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 3403380 - 3403226
Alignment:
Q  127 gataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaatgcgacaatgcaa-tctaaacctc 225  Q
    ||||| ||| ||||||||| |||  |||||||||||| || ||||||| ||||||||||        |||||||||||||||||||||| ||||||||||    
T  3403380 gataaacaattatcaagtaatcacatcattcaatcatcatcaataacaaaacatctttcg-------actcgacaatgcgacaatgcaaatctaaacctc 3403288  T
Q  226 ttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  3403287 ttatatgcatgtggtaccaatacagggcatgagcccccaacatcataatattgatatacttt 3403226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 173 - 304
Target Start/End: Complemental strand, 14878912 - 14878779
Alignment:
Q  173 cataacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat- 271  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||  || || |||||||||||| |||| |||||  |||||||||||| ||||| ||||     
T  14878912 cataacatctttcattatttgactcgactatgcgacaatgcaacttagacttcttatatgcatgtggtaccaatatagggcatgagcctccaacgttatt 14878813  T
Q  272 -agtattaatatactttcagggcataagccccca 304  Q
     ||||||||||||||| |||||||||||||||||    
T  14878812 gagtattaatatacttccagggcataagccccca 14878779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 855881 - 855994
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   |||||||||||||||||||     
T  855881 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcaa 855980  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  855981 ggcatgagccccca 855994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 15067424 - 15067537
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||| | ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  15067424 actcgactatgcggctatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcag 15067523  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  15067524 ggcatgagccccca 15067537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 12852891 - 12852797
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat 295  Q
    ||||| ||||||||| | ||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  12852891 aatgcaacaatgcaaccaaaacctcttatatgcatgtggtaccaattcagggcatgagccctcaacatcatagtattaatatacttttagggcat 12852797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 120 - 285
Target Start/End: Complemental strand, 11557816 - 11557657
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||| ||| ||  ||||||||| ||| ||||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| ||    
T  11557816 catctttgttaaacagttatcaagtaatcacttcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatc 11557724  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    |||  ||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  11557723 taagactcttatatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatact 11557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 1983241 - 1983081
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    ||||||||||||  || ||||||||| |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| ||    
T  1983241 catctttgataaataattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatc 1983149  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||| ||||||| |||| ||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  1983148 taaacctctt-tatgcatgtggtaccaat-cagggcatgaggccccaacatcatagtattaatatacttt 1983081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 15878426 - 15878313
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  15878426 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 15878327  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  15878326 ggcataagccccca 15878313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 16796067 - 16796152
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||    
T  16796067 acctcttatatgcatgtggtaccaatttagggcatgagcccccaacgttattgagtattaatatacttccagggcataagccccca 16796152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 23408173 - 23408284
Alignment:
Q  196 tcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcaggg 292  Q
    ||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||||    
T  23408173 tcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccaggg 23408272  T
Q  293 cataagccccca 304  Q
    ||| ||||||||    
T  23408273 catgagccccca 23408284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 16369142 - 16369254
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||| |||||||||||||   ||||||||   |||||||||||||||||||    
T  16369142 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaatgcagggcatgagcctt-aacattattttagtattaatatactttcag 16369240  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  16369241 ggcatgagccccca 16369254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 12038274 - 12038212
Alignment:
Q  232 gcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggca 294  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  12038274 gcatgtggtaccaattcagggcatgagcccccaacatcatagtattaatatacttttagggca 12038212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 16909615 - 16909692
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat 271  Q
    ||||||| ||||||| ||||||  || ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  16909615 actcgactatgcgactatgcaacttagacctcttatatgcaagtggtaccaattcagggcatgagcccccaacattat 16909692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 11595493 - 11595409
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  11595493 aatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 11595409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 42325704 - 42325788
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  42325704 aatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 42325788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 17318248 - 17318163
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||   | ||| ||||| || |||||||||||||    
T  17318248 aacataatcatcttaaacatcatagcatctttgataaacaattatcaagtaatcacaactttcgatcatcatcaataacataacat 17318163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 52524102 - 52523999
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aagccc 301  Q
    |||| ||||||  |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| |||||||| ||||||    
T  52524102 cgactatgcaacttaaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaagccc 52524003  T
Q  302 ccaa 305  Q
    ||||    
T  52524002 ccaa 52523999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 17499089 - 17499197
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat---agtattaatatactttcagggcat- 295  Q
    ||||| || ||||||  |||||||||||||||||| |||| ||||| ||||||||  |||||||| || |||   ||||||||||||||| ||||||||     
T  17499089 aatgcaactatgcaacttaaacctcttatatgcatgtggtaccaatacagggcatcaagcccccatcactatttgagtattaatatacttccagggcatc 17499188  T
Q  296 aagccccca 304  Q
    |||||||||    
T  17499189 aagccccca 17499197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 16097098 - 16097206
Alignment:
Q  190 tttaactcgacaa-tgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatg-agcccccaacattat-agtattaatatactt 286  Q
    ||||||||||||| ||| || ||||||  || ||||||||||||||| |||| ||||| ||||||||| ||||| |||| |  | |||||||||||||||    
T  16097098 tttaactcgacaaatgcaactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatgaagccctcaacgtagtaagtattaatatactt 16097197  T
Q  287 tcagggcat 295  Q
     ||||||||    
T  16097198 ccagggcat 16097206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 4108344 - 4108265
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  4108344 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 4108265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 4112196 - 4112117
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  4112196 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 4112117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 7108700 - 7108779
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  7108700 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 7108779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 7112635 - 7112714
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  7112635 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 7112714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 11166633 - 11166554
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  11166633 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 11166554  T

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Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 14159920 - 14159841
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  14159920 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 14159841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 14234226 - 14234329
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aagccc 301  Q
    |||| ||||||  |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||| |||| ||||||    
T  14234226 cgactatgcaacttaaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagagcatcaagccc 14234325  T
Q  302 ccaa 305  Q
    ||||    
T  14234326 ccaa 14234329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 15616639 - 15616718
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  15616639 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 15616718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 15963940 - 15964019
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  15963940 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 15964019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 15967864 - 15967943
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  15967864 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 15967943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 15971788 - 15971867
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  15971788 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 15971867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 22320668 - 22320747
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  22320668 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 22320747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 22335723 - 22335802
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  22335723 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 22335802  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 28948846 - 28948925
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  28948846 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 28948925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 30064851 - 30064930
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  30064851 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 30064930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 31097973 - 31097886
Alignment:
Q  98 cataatca-tcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt 183  Q
    |||||||| |||||||||||||  |||||||||||| ||| || |||||| |||   ||||||||||| || ||||||||||||||||    
T  31097973 cataatcagtcttaaacatcattgcatctttgataaacaattaccaagtaatcacaacattcaatcatcatcaataacataacatctt 31097886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 42386172 - 42386259
Alignment:
Q  210 atgcaatctaaacctcttatatgcatctggtgccaattcagggcatga-gcccccaacattata-gtattaatatactttcagggcat 295  Q
    |||||| |||||||| |||||||||| |||| ||||| |||||||| | |||| |||| | ||| |||||||||||||| ||||||||    
T  42386172 atgcaacctaaaccttttatatgcatatggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 42386259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 55021989 - 55022068
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  55021989 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 55022068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 17487627 - 17487715
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat---agtattaatatactttcagggcat-aagccccca 304  Q
    ||||||||||||||| |||| ||||| ||||||||  |||||||| || |||   ||||||||||||||| |||||||| |||||||||    
T  17487627 acctcttatatgcatgtggtaccaatacagggcatcaagcccccatcactatttgagtattaatatacttccagggcatcaagccccca 17487715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 23083711 - 23083623
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat---agtattaatatactttcagggcat-aagccccca 304  Q
    ||||||||||||||| |||| ||||| ||||||||  |||||||| || |||   ||||||||||||||| |||||||| |||||||||    
T  23083711 acctcttatatgcatgtggtaccaatacagggcatcaagcccccatcactatttgagtattaatatacttccagggcatcaagccccca 23083623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 7793756 - 7793637
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgac-aatgcgacaatgcaatct 218  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||       ||  ||||||| |||||||||||||||  |    
T  7793756 catctttgataa-caattatcaagtaatcacaacattcaatcatcatcaataacataacatct-------ttagactcgacaaatgcgacaatgcaactt 7793665  T
Q  219 aaacctcttatatgcatctggtgccaat 246  Q
    | ||||||||||||||| |||| |||||    
T  7793664 agacctcttatatgcatgtggtaccaat 7793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 40214097 - 40214036
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat 255  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| ||||||||    
T  40214097 actcgacaatgtgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcat 40214036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 11069152 - 11069228
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataa 177  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || ||||||||||    
T  11069152 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataa 11069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 12174607 - 12174531
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  12174607 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 12174531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 14872370 - 14872290
Alignment:
Q  173 cataacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggc 253  Q
    |||||||||||||||| ||| ||||||| |||| |||||||||  |  || ||||||||| || |||| ||||| ||||||    
T  14872370 cataacatctttcattatttgactcgactatgccacaatgcaacttggacttcttatatgaatgtggtaccaatacagggc 14872290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 20461906 - 20461843
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt 184  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||||    
T  20461906 catctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacatcttt 20461843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 23077772 - 23077740
Alignment:
Q  272 agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||||||||||||||||    
T  23077772 agtattaatatacttccagggcataagccccca 23077740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 27411187 - 27411104
Alignment:
Q  96 aacataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||||  | ||||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  27411187 aacataatcatcttaaacaata-acatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 27411104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 5e-84; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 14429528 - 14429753
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||   ||     
T  14429528 caacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacatctttcatcaattg 14429627  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14429628 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccagcattatagtattaatatactttcagggc 14429727  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||||||||||||    
T  14429728 ataagcccccaacaattattttgagc 14429753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 98 - 305
Target Start/End: Original strand, 2759785 - 2759994
Alignment:
Q  98 cataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgtttaac 195  Q
    ||||| |||||||||||||||  |||||||||||| ||| ||||||||| ||| ||||||||||||| || |||| |||||||| ||  |||  ||| ||    
T  2759785 cataaacatcttaaacatcattgcatctttgataaacaattatcaagtaatcacttcattcaatcatcatcaatatcataacattttaacatcatttgac 2759884  T
Q  196 tcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat 295  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2759885 tcgacaatgcaacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat 2759984  T
Q  296 aagcccccaa 305  Q
    ||||||||||    
T  2759985 aagcccccaa 2759994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 17138436 - 17138323
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  17138436 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcag 17138337  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  17138336 ggcatgagccccca 17138323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 12322112 - 12321990
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||||||||||||||| ||  || |||||||||  |||| |||| ||||||||||| |||||||||||||||| |||||| ||||||| ||||||||    
T  12322112 actcgacaatgcgacaatgaaacttagacctcttat--gcatgtggtaccaattcaggggatgagcccccaacattttagtataaatatacgttcagggc 12322015  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    ||||||||||||  ||||||||||||    
T  12322014 ataagcccccaa-cattattttgagc 12321990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 105 - 285
Target Start/End: Original strand, 42203666 - 42203840
Alignment:
Q  105 atcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgaca-a 202  Q
    ||||||||||||||  |||||||||||| ||| || |||||| |||  |||||||||| | || |||||||||||||||||       | |||||||| |    
T  42203666 atcttaaacatcattgcatctttgataaacaattaacaagtattcacatcattcaatcgtcatcaataacataacatcttt-------tgactcgacaga 42203758  T
Q  203 tgcgacaatgc-aatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||||||||||| |||||||||||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  42203759 tgcgacaatgcgaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatact 42203840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 18301832 - 18301920
Alignment:
Q  207 acaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat 295  Q
    ||||||||| | |||||||||||||| || |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  18301832 acaatgcaaccaaaacctcttatatgtatgtggtaccaattcagggcatgagcccccaacatcatagtattaatatacttttagggcat 18301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 12186760 - 12186873
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||| |||||||||||| |||||||||   ||||||||||||||||||||    
T  12186760 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaatttagggcatgagcctccaacattattttagtattaatatactttcag 12186859  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  12186860 ggcatgagccccca 12186873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 304
Target Start/End: Original strand, 24054099 - 24054320
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt----tcat- 187  Q
    ||||||||| |||||||||||||||| ||||   |||||| | |||||||||| ||| |||||| || ||| ||||||  |||||||||||    ||||     
T  24054099 tcaacataagcatcttaaacatcatagcatcaaagataataatatatcaagtaatcacttcattaaagcatcataaatctcataacatcttaacatcata 24054198  T
Q  188 --tgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatat 282  Q
      |  || ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  |||||||||||    
T  24054199 catcattgactcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatat 24054298  T
Q  283 actttcagggcataagccccca 304  Q
    |||| |||||||| ||||||||    
T  24054299 acttccagggcatgagccccca 24054320  T

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Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 18155215 - 18155102
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||    
T  18155215 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccag 18155116  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  18155115 ggcataagccccca 18155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 19649864 - 19649751
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||| ||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  19649864 actcgactatgcgactatgcaacttagacctcttatatccatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 19649765  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  19649764 ggcataagccccca 19649751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 15580352 - 15580545
Alignment:
Q  95 caacataatcatcttaaacatcatac-atctttgataatcaaatatcaagtactcatttcattcaat-cataataaataacataacatctttcattgttt 192  Q
    |||||||| ||||||||||||||||  ||| ||||||| |||||||||  || ||| || ||||||  |||  |||| || ||||||| ||||||   ||    
T  15580352 caacataaacatcttaaacatcatagtatcattgataaacaaatatcagataatcactt-attcaaaacatcttaaacaaaataacatttttcatcaatt 15580450  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
     ||||||||||| ||||||||||  || ||||||||||||||| ||||  || | ||||||||||||||||| ||| ||| ||||||||||||||    
T  15580451 gactcgacaatgagacaatgcaacttagacctcttatatgcatgtggtagcattacagggcatgagcccccatcatcataatattaatatacttt 15580545  T

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Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 20487352 - 20487418
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  20487352 acctcttatatgcatatggtatcaattcagggcatgagcccccaacatcatagtattaatatacttt 20487418  T

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Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 9703005 - 9703117
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||| |||||||||||||||||| |   |||  ||||||||||||||| |||    
T  9703005 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaa-tcagggcatgagcccccatcgctatttgagtattaatatacttccag 9703103  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  9703104 ggcataagccccca 9703117  T

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Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 3271505 - 3271594
Alignment:
Q  90 atcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||| |||| ||||||||||    
T  3271505 atcaacaacataatcatcttaaacatcatagcatcattgataataaaatatcaagtaatca-ctcattcaatcatcataattaacataaca 3271594  T

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Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 15211204 - 15211309
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataag 298  Q
    ||||||| ||||||  || ||||||||||||||| |||  ||||| ||||||||||||||||||| ||||   | ||||||||||||| |||||||| ||    
T  15211204 atgcgactatgcaacttagacctcttatatgcatgtggcaccaatacagggcatgagcccccaacgttatttgaatattaatatacttccagggcatgag 15211303  T
Q  299 ccccca 304  Q
    ||||||    
T  15211304 ccccca 15211309  T

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Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 285
Target Start/End: Complemental strand, 9446590 - 9446431
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||||||| ||| || |||||| |||  |||||||||||| || |||||||||||| ||||       | ||||||||| ||| | ||||||| ||    
T  9446590 catctttgataaacaattaacaagtattcacatcattcaatcatcatcaataacataacaacttt-------tgactcgacaaatgcaagaatgcaaatc 9446498  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    |||||||||| ||||||| |||| ||||| ||||||||||||||||||| | |||  |||||||||||    
T  9446497 taaacctcttttatgcatgtggtaccaat-cagggcatgagcccccaacgtcataacattaatatact 9446431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 32216923 - 32216811
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||| ||||||| |||| ||||||||||||||||||||||| |   |||  |||||||| ||| |||||     
T  32216923 actcgactatgcgactatgcaacttagacctctt-tatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaaaatattttcaa 32216825  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  32216824 ggcataagccccca 32216811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 20569949 - 20569865
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||| ||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  20569949 aatgcgacaatgcaaatctaaacctctt-tatacatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 20569865  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 3564680 - 3564564
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaac---attatagtattaatatactttca 289  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |   |||  ||||||||||||||| ||    
T  3564680 actcgacaatgtgactatgcaacttagacctcttatatgcatgtggtaccaatacagggcatcaagcccccatcgctatttgagtattaatatacttcca 3564581  T
Q  290 gggcat-aagcccccaa 305  Q
    |||||| ||||||||||    
T  3564580 gggcatcaagcccccaa 3564564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 11858322 - 11858384
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatg 256  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||    
T  11858322 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatg 11858384  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 12317835 - 12317955
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgac-aatgcgacaatgcaatct 218  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||       ||  ||||||| |||||||||||||||  |    
T  12317835 catctttgataaacaattatcaagtaatcacagcattcaatcatcatcaataacataacatct-------ttagactcgacaaatgcgacaatgcaactt 12317927  T
Q  219 aaacctcttatatgcatctggtgccaat 246  Q
    | ||||||||||||||| |||| |||||    
T  12317928 agacctcttatatgcatgtggtaccaat 12317955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 2282623 - 2282531
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||| ||||||  |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  2282623 cgactatgcaacttaaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 2282531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 15605668 - 15605549
Alignment:
Q  121 atctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgac-aatgcgacaatgcaatcta 219  Q
    ||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||       ||  ||||||| |||||||||||||||  ||    
T  15605668 atctttgataaacaattatcaagtaatcacagcattcaatcatcatcaataacataacatct-------ttagactcgacaaatgcgacaatgcaactta 15605576  T
Q  220 aacctcttatatgcatctggtgccaat 246  Q
     ||||||||||||||| |||| |||||    
T  15605575 gacctcttatatgcatgtggtaccaat 15605549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 16056076 - 16056168
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||| ||||||  |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  16056076 cgactatgcaacttaaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 16056168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 32110 - 32189
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  32110 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 32189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 71912 - 71833
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  71912 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 71833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 76021 - 75942
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  76021 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 75942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 12705772 - 12705693
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  12705772 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 12705693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 3271605 - 3271649
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattca 249  Q
    ||||||||||| | ||||||||||||||||| |||| ||||||||    
T  3271605 cgacaatgcaaccaaaacctcttatatgcatgtggtaccaattca 3271649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 5e-84; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 37524328 - 37524553
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||   ||     
T  37524328 caacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacatctttcatccattg 37524427  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37524428 actcgacaatgcaacaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccaacattatagtattaatatactttcagggc 37524527  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||||||||||||    
T  37524528 ataagcccccaacaattattttgagc 37524553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 88 - 319
Target Start/End: Complemental strand, 25964195 - 25963963
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-c 185  Q
    ||||| |||||||| ||||||||||||||||| |||| |||||||| |||||||||||| ||| || |||||||||| |||||||||||||||||||  |    
T  25964195 acatcttcaacatattcatcttaaacatcatagcatcattgataataaaatatcaagtaatcactttattcaatcatcataaataacataacatcttaac 25964096  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||   || || ||||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||||||||    
T  25964095 atcaattgacccgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcataagcccccagcattatagtattaatatact 25963996  T
Q  286 ttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||||  ||||||||||||    
T  25963995 ttcagggcataagcccccaa-cattattttgagc 25963963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 95 - 287
Target Start/End: Complemental strand, 24716989 - 24716796
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| ||||||||| |||||  |||| |||||||| |||||||||||| ||| ||||||||||||| |||| ||||||||||||||||||   ||     
T  24716989 caacataaacatcttaaatatcattgcatcattgataataaaatatcaagtaatcacttcattcaatcatcataattaacataacatctttcatcaattg 24716890  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24716889 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacatcatagtattaatatacttt 24716796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 88 - 304
Target Start/End: Original strand, 24679818 - 24680038
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| ||||||||| |||||||||||||||| | || |||||||| ||||| | |||| ||| ||||||||||||| ||||||||| ||||||| ||||    
T  24679818 acatcttcaacataagcatcttaaacatcataacttcattgataataaaatacccagtaatcacttcattcaatcatcataaataacctaacatcattca 24679917  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatata 283  Q
    |  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   |||||||||||||    
T  24679918 tcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatata 24680017  T
Q  284 ctttcagggcataagccccca 304  Q
    |||||||||||| ||||||||    
T  24680018 ctttcagggcatgagccccca 24680038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 96 - 319
Target Start/End: Complemental strand, 22812376 - 22812160
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaa 194  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||| ||| | ||||||| ||||||||| ||       | |    
T  22812376 aacataatcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattctatcttcataaatatcataacatcatt-------tga 22812284  T
Q  195 ctcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggca 294  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  22812283 ctcgacaatgcgaccatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccagcattatagtattaatatactttaagggca 22812184  T
Q  295 taagcccccaagaattattttgagc 319  Q
    ||||||||||| || ||||||||||    
T  22812183 taagcccccaacaa-tattttgagc 22812160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 94 - 304
Target Start/End: Complemental strand, 23020190 - 23019969
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--------t 184  Q
    ||||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||| || ||| |||||||| ||||||||||        |    
T  23020190 tcaacataagcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcatttaaacatcataaataatataacatcttaacatcttt 23020091  T
Q  185 cattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatat 282  Q
    |||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| ||||||||||||||||||||||||| ||||  |||||||||||    
T  23020090 catcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttattgagtattaatat 23019991  T
Q  283 actttcagggcataagccccca 304  Q
    || | |||||||||||||||||    
T  23019990 acatccagggcataagccccca 23019969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 88 - 304
Target Start/End: Original strand, 24673193 - 24673421
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--- 183  Q
    ||||| ||||||||| |||||||||||||||| | || |||||||| ||||| | |||| ||| ||||||||||||| ||||||||| |||||||||       
T  24673193 acatcttcaacataagcatcttaaacatcataacttcattgataataaaatacccagtaatcacttcattcaatcatcataaataacctaacatcttaac 24673292  T
Q  184 -----tcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagta 275  Q
         ||||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   |||||    
T  24673293 atcattcatcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagta 24673392  T
Q  276 ttaatatactttcagggcataagccccca 304  Q
    |||||||||||||||||||| ||| ||||    
T  24673393 ttaatatactttcagggcatgagctccca 24673421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 305
Target Start/End: Complemental strand, 21319112 - 21318900
Alignment:
Q  104 catcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt----------tcattgttt 192  Q
    |||||||||||||||| |||| |||||||| |||||||||| | ||| ||||||||||||| ||| ||||||||||| |||          | ||  |||    
T  21319112 catcttaaacatcatagcatcattgataataaaatatcaagcaatcacttcattcaatcatcatagataacataacaacttaaaacaactttaatcattt 21319013  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||| |||  || ||||||||||||||| |||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  21319012 gactcgacaatgcgacaatccaacttagacctcttatatgcatgtggtaccaattcagggcataagcccccaacagtttagtattaatatactttcaggg 21318913  T
Q  293 cataagcccccaa 305  Q
    | |||||||||||    
T  21318912 cttaagcccccaa 21318900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 305
Target Start/End: Complemental strand, 21328043 - 21327831
Alignment:
Q  104 catcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt----------tcattgttt 192  Q
    |||||||||||||||| |||| |||||||| |||||||||| | ||| ||||||||||||| ||| ||||||||||| |||          | ||  |||    
T  21328043 catcttaaacatcatagcatcattgataataaaatatcaagcaatcacttcattcaatcatcatagataacataacaacttaaaacaactttaatcattt 21327944  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||  | ||||||||| ||||||||||||    
T  21327943 gactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaactgtttagtattaacatactttcaggg 21327844  T
Q  293 cataagcccccaa 305  Q
    | |||||||||||    
T  21327843 cttaagcccccaa 21327831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 40428205 - 40428325
Alignment:
Q  194 actcgacaatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  40428205 actcgacaatgcgacaatgcaaatctaaacctcttatatgcatgtggtaccaat-cagggcatgagcccccaacagtttagtattaatatactttcaggg 40428303  T
Q  293 cataagcccccaagaattattt 314  Q
    ||||||||| ||| ||||||||    
T  40428304 cataagccctcaacaattattt 40428325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 24174486 - 24174646
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| ||    
T  24174486 catctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatc 24174578  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||| ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24174579 taaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacattatagtattaatatacttt 24174646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 304
Target Start/End: Complemental strand, 22799616 - 22799389
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataa-----ataacat---aac 178  Q
    ||||| ||||||||| |||||||||||||||| |||| | |||||| | |||||||||| ||| |||||| || |||  |||     |||||||   |||    
T  22799616 acatcttcaacataagcatcttaaacatcatagcatcatagataataatatatcaagtaatcacttcattaaagcatcgtaattcacataacatcttaac 22799517  T
Q  179 atctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtat 276  Q
    |||||||||| ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| || |||||||||||| | | ||||  |||||    
T  22799516 atctttcattatttgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacaaggcatgagcccctatcgttattgagtat 22799417  T
Q  277 taatatactttcagggcataagccccca 304  Q
    |||||||||| |||||||||||||||||    
T  22799416 taatatacttccagggcataagccccca 22799389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 301
Target Start/End: Complemental strand, 40622694 - 40622476
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt----tcatt 188  Q
    ||||||||| |||||||||||||||| |||| | |||||  |  ||||||||| ||| |||||| || ||| ||||||  |||||||||||    |||||    
T  40622694 tcaacataagcatcttaaacatcataacatcatagataacaatgtatcaagtaatcacttcattaaagcatcataaatctcataacatcttaacatcatt 40622595  T
Q  189 gttta---actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatat 282  Q
      | |   ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||    
T  40622594 catcattgactcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatat 40622495  T
Q  283 actttcagggcataagccc 301  Q
    ||||||||||||| |||||    
T  40622494 actttcagggcatgagccc 40622476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 25961964 - 25961802
Alignment:
Q  120 catctttgataatcaaatatcaagtac-tcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-t 216  Q
    |||||||||||| ||| |||||||||  |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| |    
T  25961964 catctttgataaacaattatcaagtaaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaat 25961872  T
Q  217 ctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25961871 ctaaacctctt-tatgcatgtggtaccaatacagggcatgagcccccaacatcatagtattaatatacttt 25961802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 24655761 - 24655609
Alignment:
Q  127 gataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaatgcgacaatgcaa-tctaaacctc 225  Q
    ||||| ||| ||||||||| |||  |||||||||||| || ||||||| |||||||||       | |||||||||||| ||||||||| ||||||||||    
T  24655761 gataaacaattatcaagtaatcacatcattcaatcatcatcaataacaaaacatcttt-------tgactcgacaatgcaacaatgcaaatctaaacctc 24655669  T
Q  226 ttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    || ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24655668 tt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 24655609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 287
Target Start/End: Original strand, 24869571 - 24869726
Alignment:
Q  125 ttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tctaaac 222  Q
    ||||||| ||| |||||| || |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| |||||||    
T  24869571 ttgataaacaattatcaaataatcacatcattcaatcatcatgaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatctaaac 24869663  T
Q  223 ctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24869664 ctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 24869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 22741339 - 22741226
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| || |||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  22741339 actcgactattcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 22741240  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  22741239 ggcataagccccca 22741226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 304
Target Start/End: Complemental strand, 22759202 - 22758981
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaat--------aacataacatcttt 184  Q
    ||||||||| |||||||||||||||| |||| | |||||| | |||||||||| ||| |||||| || ||| ||||||        | ||||||||||||    
T  22759202 tcaacataagcatcttaaacatcatagcatcatagataataatatatcaagtaatcacttcattaaagcatcataaatcttatagcatcataacatcttt 22759103  T
Q  185 cattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaata 281  Q
    |||  || | |||||| ||||||| ||||||  || ||||||||| ||||| |||| |||||||| |||||||||||||| | ||||   |||||| |||    
T  22759102 catcattga-ctcgactatgcgactatgcaacttagacctcttatgtgcatgtggtaccaattcaaggcatgagcccccatcgttatttgagtatttata 22759004  T
Q  282 tactttcagggcataagccccca 304  Q
    ||||| ||||||||| |||||||    
T  22759003 tacttccagggcataggccccca 22758981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 45678504 - 45678391
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||| |||||||||||||| |   ||| ||||||||||||||||||||    
T  45678504 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcatggcatgagcccccatctttattttagtattaatatactttcag 45678405  T
Q  291 ggcataagccccca 304  Q
     |||| ||||||||    
T  45678404 tgcattagccccca 45678391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 9784566 - 9784632
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  9784566 acctcttatatgcatgtggtaccaatacagggcatgagcccccaacatcatagtattaatatacttt 9784632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 24703649 - 24703579
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcata 164  Q
    |||||||| ||||||||| |||||  |||| |||||||| |||||||||||| ||| ||||||||||||||    
T  24703649 caacataaacatcttaaatatcattgcatcattgataataaaatatcaagtaatcacttcattcaatcata 24703579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 10102913 - 10102834
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  10102913 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 10102834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 18787263 - 18787184
Alignment:
Q  218 taaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  18787263 taaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 18787184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 23031117 - 23031176
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggc 253  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||    
T  23031117 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggc 23031176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 24629584 - 24629505
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  24629584 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 24629505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 24648356 - 24648435
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  24648356 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 24648435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 27380457 - 27380378
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  27380457 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 27380378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 27384503 - 27384424
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  27384503 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 27384424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 27600833 - 27600912
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  27600833 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 27600912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 30346120 - 30346041
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  30346120 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 30346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 41532078 - 41531999
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  41532078 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 41531999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 24735103 - 24735222
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgac-aatgcgacaatgcaatct 218  Q
    |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||| ||       ||  ||||||| |||||||||||||||  |    
T  24735103 catctttgataa-caattatcaagtaatcacatcattcaatcatcatcaataacataacaact-------ttagactcgacaaatgcgacaatgcaactt 24735194  T
Q  219 aaacctcttatatgcatctggtgccaat 246  Q
    | ||||||||||||||| |||| |||||    
T  24735195 agacctcttatatgcatgtggtaccaat 24735222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 8106 - 8014
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggca-tgagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||| ||||||  |||||||||||||||||| |||| ||||| ||||||| | ||||| |||| | || |||||||||||||||  |||||||    
T  8106 cgactatgcaacttaaacctcttatatgcatgtggtaccaatccagggcattaagccctcaacgtaataagtattaatatacttcaagggcat 8014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 7679366 - 7679430
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacat 268  Q
    |||||||||||  || ||||||||||||||| |||| ||||| ||||||||  ||||||||||||    
T  7679366 cgacaatgcaacttagacctcttatatgcatgtggtaccaatccagggcataaagcccccaacat 7679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 21367138 - 21366912
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||  |||  |||    
T  21367138 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacatcttaacatcattt 21367039  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21367038 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 21366939  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    ||||||||||||| |||||||||||||    
T  21366938 cataagcccccaacaattattttgagc 21366912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 96 - 287
Target Start/End: Complemental strand, 1859436 - 1859244
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaa 194  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||| | || ||||||||||||||||||   || |    
T  1859436 aacataatcatcttaaacatcataacatcattgataataaaatatcaagtaatcacatcattcaatcatcacaattaacataacatctttcatcaattga 1859337  T
Q  195 ctcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||||||| |||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  1859336 ctcgacaatgcgactatgcaaccaaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacatcatagtattaatatacttt 1859244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 20805289 - 20805418
Alignment:
Q  190 tttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttca 289  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  20805289 tttaactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagccctcagcattatagtattaatatactttca 20805388  T
Q  290 gggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||| |||||||||||||    
T  20805389 gggcataagcccccaacaattattttgagc 20805418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 20766711 - 20766840
Alignment:
Q  190 tttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttca 289  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  20766711 tttaactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccagcattatagtattaatataatttca 20766810  T
Q  290 gggcataagcccccaagaattattttgagc 319  Q
    |||||||||||| ||| |||||||||||||    
T  20766811 gggcataagccctcaacaattattttgagc 20766840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 88 - 295
Target Start/End: Original strand, 23439633 - 23439834
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||  || ||||||||| ||| ||||||||||||| | |||||||||||||||  |      
T  23439633 acatcttcaacataatcatcttaaacatcatagcatcattgataacaaattatcaagtaatcacttcattcaatcatcacaaataacataacatcagt-- 23439730  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
         | |||||||||||| ||||||||| ||||||||| ||||||||| |||| ||||||| |||||||||||||||||| | ||||||||||||||||    
T  23439731 -----tgactcgacaatgctacaatgcaacctaaacctcatatatgcatgtggtaccaattctgggcatgagcccccaacagtttagtattaatatactt 23439825  T
Q  287 tcagggcat 295  Q
    ||| |||||    
T  23439826 tcaaggcat 23439834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 88 - 295
Target Start/End: Original strand, 23451000 - 23451201
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||  || ||||||||| ||| ||||||||||||| | |||||||||||||||  |      
T  23451000 acatcttcaacataatcatcttaaacatcatagcatcattgataacaaattatcaagtaatcacttcattcaatcatcacaaataacataacatcagt-- 23451097  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
         | |||||||||||| ||||||||| ||||||||| ||||||||| |||| ||||||| |||||||||||||||||| | ||||||||||||||||    
T  23451098 -----tgactcgacaatgctacaatgcaacctaaacctcatatatgcatgtggtaccaattctgggcatgagcccccaacagtttagtattaatatactt 23451192  T
Q  287 tcagggcat 295  Q
    ||| |||||    
T  23451193 tcaaggcat 23451201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 88 - 295
Target Start/End: Original strand, 23458244 - 23458445
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| |||||||||||||||||||||||||| |||| || ||||  || ||||||||| ||| ||||||||||||| |||||||||||||||||  |      
T  23458244 acatcttcaacataatcatcttaaacatcatagcatcattcataacaaattatcaagtaatcacttcattcaatcatcataaataacataacatcagt-- 23458341  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
         | |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||| |||||||||||| | || |||||||||||||    
T  23458342 -----tgactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcatggcaggagcccccaacagtttaatattaatatactt 23458436  T
Q  287 tcagggcat 295  Q
    ||| |||||    
T  23458437 tcaaggcat 23458445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 88 - 295
Target Start/End: Original strand, 23462505 - 23462706
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| |||||||||||||||||||||||||| |||| || ||||  || ||||||||| ||| ||||||||||||| |||||||||||||||||  |      
T  23462505 acatcttcaacataatcatcttaaacatcatagcatcattcataacaaattatcaagtaatcacttcattcaatcatcataaataacataacatcagt-- 23462602  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
         | |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||| |||||||||||| | || |||||||||||||    
T  23462603 -----tgactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcatggcaggagcccccaacagtttaatattaatatactt 23462697  T
Q  287 tcagggcat 295  Q
    ||| |||||    
T  23462698 tcaaggcat 23462706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 120 - 314
Target Start/End: Complemental strand, 17919586 - 17919397
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcatt-caatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-t 216  Q
    |||||||||||| ||| ||||||||| |||  ||||| ||||||| || |||||||||||||||||       | ||||||||| | ||||||||||| |    
T  17919586 catctttgataaacaattatcaagtaatcacatcatttcaatcatcatcaataacataacatcttt-------tgactcgacaaatacgacaatgcaaat 17919494  T
Q  217 ctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattt 314  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||    
T  17919493 ctaaacctcttatatgcatgtggtaccaat-cagggcatgagcccccaacagtttagtattaatatactttcagggcataagcccccaacatttattt 17919397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 173 - 304
Target Start/End: Original strand, 23511821 - 23511954
Alignment:
Q  173 cataacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat- 271  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||||||||||||||||||||||| ||||     
T  23511821 cataacatctttcattatttgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttatt 23511920  T
Q  272 -agtattaatatactttcagggcataagccccca 304  Q
     | ||||||||||||| |||||||||||||||||    
T  23511921 gaatattaatatacttccagggcataagccccca 23511954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 123710 - 123557
Alignment:
Q  155 ttcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcaggg 252  Q
    ||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| |||||||||||||||||||| |||| ||||| |||||    
T  123710 ttcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatctaaacctcttatatgcatgtggtaccaat-caggg 123619  T
Q  253 catgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattt 314  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||||| | ||||||    
T  123618 catgagcccccaatagtttagtattaatatactttcagggcataagcccccaacatttattt 123557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 20766636 - 20766711
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttcattcaatcat 163  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20766636 acatcttcaacataatcatcttaaacatcatacatcttggataatcaaatatcaagtactcatttcattcaatcat 20766711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 20805214 - 20805289
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcatacatctttgataatcaaatatcaagtactcatttcattcaatcat 163  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  20805214 acatcatcaacataatcatcttaaacatcatacatcttggataatcaactatcaagtactcatttcattcaatcat 20805289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 23201082 - 23201214
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--- 271  Q
    |||||||||||||  ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||       
T  23201082 taacatctttcatcatttgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttattta 23201181  T
Q  272 agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| ||| |||||||||||||    
T  23201182 agtattaatatacttccagtgcataagccccca 23201214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 18770379 - 18770266
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| |||| || ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  18770379 actcgactatgcaactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcag 18770280  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  18770279 ggcatgagccccca 18770266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 287
Target Start/End: Original strand, 24221568 - 24221723
Alignment:
Q  125 ttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tctaaac 222  Q
    ||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| |||||||    
T  24221568 ttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatctaaac 24221660  T
Q  223 ctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24221661 ctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 24221723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 22032091 - 22032177
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||    
T  22032091 acctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcagggcatgagccccca 22032177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 21873004 - 21873108
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagggcataagc 299  Q
    ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||  ||||||||||||||| ||||||||||||    
T  21873004 atgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattgagtattaatatacttccagggcataagc 21873103  T
Q  300 cccca 304  Q
    |||||    
T  21873104 cccca 21873108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 22107962 - 22107876
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||||||||||||||||    
T  22107962 acctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccagggcataagccccca 22107876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 14078891 - 14079004
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||| |||||||||||| || | |||    ||||||||||||||| |||    
T  14078891 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcggggcatgagccctcatcgttagttgagtattaatatacttccag 14078990  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  14078991 ggcataagccccca 14079004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 21887031 - 21887125
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactt 286  Q
    ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||  |||||||||||||||    
T  21887031 actcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattgagtattaatatactt 21887125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 22756891 - 22756974
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||||||| |||| || ||||||||||||||||    
T  22756891 aatgcgacaatgcaatctaaacctctt-tatgcatgtggtaccaa-tcagggcatgagccctcaacaatcatagtattaatatact 22756974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 21877284 - 21877370
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactt 286  Q
    ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||  |||||||||||||||    
T  21877284 atgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattgagtattaatatactt 21877370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 26703819 - 26703932
Alignment:
Q  195 ctcgacaatgcgacaatgcaatctaa-acctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    |||||| ||||||| ||||||  ||| ||||||||||||| | |||| |||||| |||||||||||||||| |   |||  ||||||||||||| | |||    
T  26703819 ctcgactatgcgactatgcaacttaagacctcttatatgcttgtggtaccaatttagggcatgagcccccatcgctatttgagtattaatatacctccag 26703918  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  26703919 ggcataagccccca 26703932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 26973552 - 26973665
Alignment:
Q  195 ctcgacaatgcgacaatgcaatctaa-acctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    |||||| ||||||| ||||||  ||| ||||||||||||| | |||| |||||| |||||||||||||||| |   |||  ||||||||||||| | |||    
T  26973552 ctcgactatgcgactatgcaacttaagacctcttatatgcttgtggtaccaatttagggcatgagcccccatcgctatttgagtattaatatacctccag 26973651  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  26973652 ggcataagccccca 26973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 12028919 - 12028835
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    |||| |||||||||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  12028919 aatgtgacaatgcaagtctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 12028835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 26680344 - 26680428
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  26680344 aatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggtatgagcccccaacaatcatagtattaatatact 26680428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 26951951 - 26952035
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  26951951 aatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggtatgagcccccaacaatcatagtattaatatact 26952035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 9077698 - 9077811
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagg 291  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |  ||| ||||||||||||||| ||||    
T  9077698 actcgacaatgtgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctataagtattaatatacttccagg 9077797  T
Q  292 gcat-aagccccca 304  Q
    |||| |||||||||    
T  9077798 gcatcaagccccca 9077811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 31341910 - 31341994
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    |||||||||||| || |||||||||||| ||||||| |||| ||||| |||||||| |||||||||| || ||||||||||||||||    
T  31341910 aatgcgacaatgtaaatctaaacctctt-tatgcatgtggtaccaat-cagggcattagcccccaacaatcatagtattaatatact 31341994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 24528964 - 24529071
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaac---attatagtattaatatactttca 289  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |   |||  ||||||||||||||| ||    
T  24528964 actcgacaatgtgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctatttgagtattaatatacttcca 24529063  T
Q  290 gggcataa 297  Q
    ||||||||    
T  24529064 gggcataa 24529071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 40724647 - 40724562
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||||||||| |||||||| ||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  40724647 aacataatcatcttaaacatcatagcatctttgctaaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 40724562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 10752030 - 10752115
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||||||  ||| |||||||||||| ||| ||||||||| |||   ||||| ||||| || |||||||||||||    
T  10752030 tcaacataatcatcttaaaca--atagcatctttgataaacaattatcaagtaatcacaacattcgatcatcatcaataacataacat 10752115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 19473789 - 19473710
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  19473789 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 19473710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 20027301 - 20027222
Alignment:
Q  218 taaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  20027301 taaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 20027222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 22959888 - 22959801
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aagcccccaa 305  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| |||||||| ||||||||||    
T  22959888 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaagcccccaa 22959801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 11219967 - 11220045
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || ||||||||||||    
T  11219967 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataaca 11220045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 11224553 - 11224631
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || ||||||||||||    
T  11224553 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataaca 11224631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 11228376 - 11228454
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || ||||||||||||    
T  11228376 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataaca 11228454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 11230365 - 11230443
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || ||||||||||||    
T  11230365 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataaca 11230443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 23571884 - 23571931
Alignment:
Q  260 ccccaacattat---agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||   ||||||||||||||| |||||||||||||||||    
T  23571884 ccccaacattatttgagtattaatatacttccagggcataagccccca 23571931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 16523856 - 16523631
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||   ||     
T  16523856 caacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacatctttcatcaattg 16523757  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  16523756 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccagcattatagtattaatatactttcagggc 16523657  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||| ||| |||||||||||||    
T  16523656 ataagccctcaacaattattttgagc 16523631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 18692384 - 18692159
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||| | |||||||||||||||  ||| |||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||   ||     
T  18692384 caacatgaacatcttaaacatcattgcatttttgataatcaaatatcaagcaatcacttcattcaatcatcataaataacataacatctttcatcaattg 18692285  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18692284 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccagcattatagtattaatatactttcagggc 18692185  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||||||||||||    
T  18692184 ataagcccccaacaattattttgagc 18692159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 18180145 - 18180363
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||  |||||||||||||||| |||| ||||||||  ||||||||| | ||| ||||||||||||| || || ||||||||||||||       |     
T  18180145 caacatatacatcttaaacatcatagcatcattgataatataatatcaagcaatcaattcattcaatcatcatcaacaacataacatcttt-------tg 18180237  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  18180238 actcgacaatgtgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacagtttagtattaatatacttttagggc 18180337  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||||||||||||    
T  18180338 ataagcccccaacaattattttgagc 18180363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 305
Target Start/End: Complemental strand, 22408758 - 22408554
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    ||||||||  ||||||||||||||| |||| || ||||| |||||| ||||| ||| ||||||||||||| || |||||||||||||||||       |     
T  22408758 caacataaatatcttaaacatcatagcatcatttataataaaatattaagtagtcacttcattcaatcatcatcaataacataacatcttt-------tg 22408666  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||    
T  22408665 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccctatcattttagtattaatatactttcagggc 22408566  T
Q  294 ataagcccccaa 305  Q
    ||||||||||||    
T  22408565 ataagcccccaa 22408554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 21830904 - 21830688
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||| || ||||||         |||||||||||||||  |||  |||    
T  21830904 caacataaacatcttaaacatcataacatctttgataataaaatatcaagtaatcactttattcaa---------ataacataacatcttaacatcattt 21830814  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     ||||||||||||||||||||||  |||||||||||||||||| |||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  21830813 gactcgacaatgcgacaatgcaacttaaacctcttatatgcatgtggtaccaattcagggcatgaacctccaacattatagtattaatatactttcaggg 21830714  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    |||||||||||||  ||||||||||||    
T  21830713 cataagcccccaa-cattattttgagc 21830688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 88 - 319
Target Start/End: Original strand, 18906736 - 18906979
Alignment:
Q  88 acatcatcaacataatcatcttaaa-catcata-catctttgataatcaaatatcaagtactcatttcattcaatcataat---aaataacataac---- 178  Q
    ||||| ||||||||| ||||||||| ||||||| |||| |||||||| |||||||||||  ||| ||||||||||||| ||   ||||||||||||        
T  18906736 acatcttcaacataagcatcttaaaacatcatagcatcattgataataaaatatcaagtgatcacttcattcaatcatcatcataaataacataacaact 18906835  T
Q  179 ----atctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagt 274  Q
        |||||||||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  18906836 taacatctttcatcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattttagt 18906935  T
Q  275 attaatatactttcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  18906936 attaatatactttcagggcataagcccccaa-cattattttgagc 18906979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 21766345 - 21766561
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||| ||| ||| || ||||||         |||||||||||||||  |||  |||    
T  21766345 caacataaacatcttaaacatcataacatctttgataataaaatatcatgtaatcactttattcaa---------ataacataacatcttaacatcattt 21766435  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     ||||||||||||||||||||||  || |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21766436 gactcgacaatgcgacaatgcaacttatacctattatatgcatgtggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaagg 21766535  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    |||||||||||||  ||||||||||||    
T  21766536 cataagcccccaa-cattattttgagc 21766561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 15894830 - 15894699
Alignment:
Q  176 aacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---a 272  Q
    ||||||||||||  ||| |||| |||||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||   |    
T  15894830 aacatctttcatcatttgactcaacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttatttga 15894731  T
Q  273 gtattaatatactttcagggcataagccccca 304  Q
    |||||||||||||| |||||||||||||||||    
T  15894730 gtattaatatacttccagggcataagccccca 15894699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 21740412 - 21740293
Alignment:
Q  191 ttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta------tagtattaatatac 284  Q
    |||||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||      ||||||||||||||    
T  21740412 ttaactcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattaatattttagtattaatatac 21740313  T
Q  285 tttcagggcataagccccca 304  Q
     |||||||||| ||||||||    
T  21740312 cttcagggcatgagccccca 21740293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 19872862 - 19872975
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  19872862 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 19872961  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  19872962 ggcataagccccca 19872975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 19862720 - 19862833
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| | ||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  19862720 actcgactatgcgactaagcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 19862819  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  19862820 ggcataagccccca 19862833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 20908334 - 20908252
Alignment:
Q  205 cgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  20908334 cgacaatgcaaatctaaacctcttatatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 20908252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 304
Target Start/End: Complemental strand, 22335264 - 22335159
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataag 298  Q
    ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||||| ||||   ||||||||||||||| ||||||| |||    
T  22335264 atgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttatttgagtattaatatacttccagggcaaaag 22335165  T
Q  299 ccccca 304  Q
    ||||||    
T  22335164 ccccca 22335159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 25642562 - 25642449
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||| ||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  25642562 actcgactatgcgactatgcaacttataccacttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 25642463  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  25642462 ggcataagccccca 25642449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 285
Target Start/End: Complemental strand, 27568041 - 27567882
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||||||| ||| || |||||| |||  |||||||||||| || ||||||||||||||||||        ||||||||| ||||||||||||| ||    
T  27568041 catctttgataaacaattaacaagtattcacatcattcaatcatcatcaataacataacatctttcg-------actcgacaaatgcgacaatgcaaatc 27567949  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagc-ccccaacattatagtattaatatact 285  Q
    |||||||||| ||||||| |||| ||||| |||||||||||| ||||||||| ||||||||||||||||    
T  27567948 taaacctctt-tatgcatgtggtaccaat-cagggcatgagctccccaacatcatagtattaatatact 27567882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 22431999 - 22432104
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcagggcataag 298  Q
    ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||||||||||    
T  22431999 atgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccagggcataag 22432098  T
Q  299 ccccca 304  Q
    ||||||    
T  22432099 ccccca 22432104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 22438549 - 22438654
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcagggcataag 298  Q
    ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||||||||||    
T  22438549 atgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccagggcataag 22438648  T
Q  299 ccccca 304  Q
    ||||||    
T  22438649 ccccca 22438654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 22074536 - 22074470
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  22074536 acctcttatatgcatgtggtaccaatacagggcatgagcccccaacatcatagtattaatatacttt 22074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 19791132 - 19791049
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||| || ||||||||||||||||    
T  19791132 aatgcgacaatgcaatctaaacctctt-tatgcatgtggtaccaa-tcagggcatgagcccccaacaatcatagtattaatatact 19791049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 27553970 - 27553844
Alignment:
Q  152 tcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattca 249  Q
    |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| |||||||||||| ||||||| |||| ||||| ||    
T  27553970 tcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-ca 27553880  T
Q  250 gggcatgagcccccaacattatagtattaatatact 285  Q
     |||||||||||||||||| ||||||||||||||||    
T  27553879 aggcatgagcccccaacatcatagtattaatatact 27553844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 31165212 - 31165102
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat-agtattaatatactttcaggg 292  Q
    ||||||||||||||| |||||| ||| || ||| |||||||| |||| ||||| ||||||||||||||||| |  ||| ||||||||||||| |||||||    
T  31165212 actcgacaatgcgactatgcaacctagacatctcatatgcatgtggtaccaatacagggcatgagcccccatcgctataagtattaatatac-ttcaggg 31165114  T
Q  293 cataagccccca 304  Q
    ||| ||||||||    
T  31165113 catgagccccca 31165102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 16960368 - 16960285
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat-agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||| |||||||| |||||||||| | || ||||||||||||| |||||||||| ||||||||    
T  16960368 acctcttatatgcatgtggtaccaatacagggcataagcccccaacgtaataagtattaatatac-ttcagggcatgagccccca 16960285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 16759232 - 16759317
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  16759232 aacataatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 16759317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 16965684 - 16965591
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat-agtattaatatactt 286  Q
    ||||||| ||| ||| ||||||  || ||||||||||||||| |||| ||||| |||||||| |||||||||| | || |||||||||||||||    
T  16965684 actcgactatgagactatgcaacttagacctcttatatgcatgtggtaccaatacagggcataagcccccaacgtaataagtattaatatactt 16965591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 2077028 - 2077075
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacat 268  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  2077028 acctcttatatgcatgtggtaccaatacagggcatgagcccccaacat 2077075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 22081105 - 22080998
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacatta-tagtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||  ||||| |||| | | ||||||||||||||||  ||||||| ||    
T  22081105 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatcaagccctcaacgtaattagtattaatatacttctagggcatcaa 22081006  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  22081005 gcccccaa 22080998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 25629723 - 25629617
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatga-gcccccaacattata-gtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||| || ||||| ||||||||| |||| ||||| |||||||| | ||||||| |  |||| |||||||||||||| |||||||| ||    
T  25629723 aatgcgactatgcaatttagacctcctatatgcatgtggtaccaatccagggcatcaagcccccatcgctataagtattaatatacttccagggcatcaa 25629624  T
Q  298 gccccca 304  Q
    |||||||    
T  25629623 gccccca 25629617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 20638662 - 20638547
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaac---attatagtattaatatactttca 289  Q
    |||||||||||| || ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |   |||  ||||||||||||||| ||    
T  20638662 actcgacaatgcaactatgcaacttagacctcttatatgcatgtggtaccaatacagggcatcaagcccccatcgctatttgagtattaatatacttcca 20638563  T
Q  290 gggcat-aagccccca 304  Q
    |||||| |||||||||    
T  20638562 gggcatcaagccccca 20638547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 22831258 - 22831360
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat-aagc 299  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| |||||||| |  ||||  ||||  ||||||||||||||| |||||||| ||||    
T  22831258 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatacagggcatcaagcccc--catttgagtattaatatacttccagggcatcaagc 22831355  T
Q  300 cccca 304  Q
    |||||    
T  22831356 cccca 22831360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 23394063 - 23394148
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    ||||| |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  23394063 aacattatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 23394148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 15041872 - 15041804
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccc 262  Q
    ||||||||||||||| |||||| ||| || ||| |||||||| |||| ||||| |||||||| ||||||    
T  15041872 actcgacaatgcgactatgcaacctagacatctcatatgcatgtggtaccaatacagggcataagcccc 15041804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 27325954 - 27325902
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaat 246  Q
    ||||||||||||||||||||||  || ||||||||||||||| |||| |||||    
T  27325954 actcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaat 27325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 11565863 - 11565942
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  11565863 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 11565942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 12619947 - 12619868
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  12619947 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 12619868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 19869630 - 19869709
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  19869630 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 19869709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 22948118 - 22948197
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  22948118 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 22948197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 22952074 - 22952153
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  22952074 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 22952153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 23413977 - 23414056
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  23413977 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 23414056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 23870562 - 23870641
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  23870562 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 23870641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 23874518 - 23874597
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  23874518 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 23874597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 23988961 - 23989040
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  23988961 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 23989040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 31479328 - 31479243
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||||||  ||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  31479328 tcaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 31479243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 88 - 319
Target Start/End: Complemental strand, 3473401 - 3473170
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||  |  ||||||||||||||||||||||    
T  3473401 acatcttcaaca-aatcatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaaataacataaataacataacatctttca 3473303  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
    |   || |||||||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  3473302 tcaattgactcgacaatgcgacaatgcaaactaaacctcttatatgcatgtggtaccaatacagggcatgagcccccaacattatagtattaatatactt 3473203  T
Q  287 tcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||| |||||||||||||    
T  3473202 tcagggcataagcccccaacaattattttgagc 3473170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 18182598 - 18182367
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--------tc 185  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||        ||    
T  18182598 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacatcttaacatctttc 18182499  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||  ||| |||||||||||| |||||||||  || ||||||||||||||| |||| ||||| || |||||||| |||||||||| |||||||||||||||    
T  18182498 atcatttgactcgacaatgcaacaatgcaacttagacctcttatatgcatgtggtaccaatacatggcatgag-ccccaacattttagtattaatatact 18182400  T
Q  286 ttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||||  ||||||||||||    
T  18182399 ttcagggcataagcccccaa-cattattttgagc 18182367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 125 - 319
Target Start/End: Complemental strand, 8762072 - 8761877
Alignment:
Q  125 ttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttc-attgtttaactcgacaatgcgacaatgcaatctaaacc 223  Q
    ||||||||  ||||||||||  ||| ||||||||||||| || || ||||||||||||||  | |    ||  ||||||||||||||||||| |||||||    
T  8762072 ttgataatataatatcaagtcatcacttcattcaatcatcatcaacaacataacatcttttgactcaacaatgcgacaatgcgacaatgcaacctaaacc 8761973  T
Q  224 tcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||| |||||||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8761972 tcttatatgcatgtggtaccaattcaggacatgagaccccaacagtttagtattaatatactttcagggcataagcccccaacaattattttgagc 8761877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 17679051 - 17678833
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||  |||||||||||||||| |||| ||||||||||||||||||| | ||| |||||||||         |||||||||||||||  |||  ||     
T  17679051 caacatatacatcttaaacatcatagcatcattgataatcaaatatcaagcaatcacttcattcaa---------ataacataacatcttaacatcattc 17678961  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||| |||||| ||||||||| | ||||||||||||||||| ||||    
T  17678960 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagagcatgatcccccaacagtttagtattaatatacttttaggg 17678861  T
Q  293 cataagcccccaagaa-ttattttgagc 319  Q
    ||||||||||||| || |||||||||||    
T  17678860 cataagcccccaacaatttattttgagc 17678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 20091848 - 20091724
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  20091848 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattttagtattaatatactttcaaggc 20091749  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    || |||||||||  ||||||||||||    
T  20091748 atgagcccccaa-cattattttgagc 20091724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 22831757 - 22831647
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||| |||| || ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22831757 actcgactatgcaactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattttagtattaatatactttcagggc 22831658  T
Q  294 ataagccccca 304  Q
    || ||||||||    
T  22831657 atgagccccca 22831647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 21788438 - 21788306
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--- 271  Q
    |||||||||||||| ||| ||||||| ||| ||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||       
T  21788438 taacatctttcattatttgactcgactatgagacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttatttg 21788339  T
Q  272 agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||||||||||||||||    
T  21788338 agtattaatatacttccagggcataagccccca 21788306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 22449639 - 22449514
Alignment:
Q  194 actcgacaatgcgacaa-tgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    |||||||| |||||||| |||||  || ||||||||||||||| |||| ||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  22449639 actcgacattgcgacaaatgcaacttagacctcttatatgcatgtggtaccaatacagggaatgagcccccaacattttagtattaatatactttcaggg 22449540  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    |||||||||| ||  ||||||||||||    
T  22449539 cataagcccctaa-cattattttgagc 22449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 6151590 - 6151703
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||| ||||||||||||||||||||   ||||||||||||||||||||    
T  6151590 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcaaggcatgagcccccaacattattttagtattaatatactttcag 6151689  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  6151690 ggcatgagccccca 6151703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 283
Target Start/End: Complemental strand, 3705496 - 3705340
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| ||    
T  3705496 catctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatc 3705404  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatata 283  Q
    |||||||||| ||||||| |||| ||||  ||||||||||||||||||||| ||||||||||||||    
T  3705403 taaacctctt-tatgcatgtggtaccaac-cagggcatgagcccccaacatcatagtattaatata 3705340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 22469077 - 22468964
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  22469077 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 22468978  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  22468977 ggcataagccccca 22468964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 21714289 - 21714402
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||    
T  21714289 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccag 21714388  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  21714389 ggcataagccccca 21714402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 42865589 - 42865480
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| || |||   ||||||||||||||| |||    
T  42865589 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcactatttgagtattaatatacttccag 42865490  T
Q  291 ggcataagcc 300  Q
    ||||||||||    
T  42865489 ggcataagcc 42865480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 22131430 - 22131345
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||| ||| ||||  |||||||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||    
T  22131430 acctcttatattcatgtggtatcaattcagggcatgagcccccaacgttattgagtattaatatacttccagggcataagccccca 22131345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 41781848 - 41781782
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||||| || |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  41781848 acctcttatatgtatgtggtaccaatacagggcatgagcccccaacatcatagtattaatatacttt 41781782  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 21022322 - 21022399
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat 271  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  21022322 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgaggccccaacattat 21022399  T

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Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 48603037 - 48603119
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaaca-ttat--agtattaatatactttcagggcataagcc 300  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||   ||||  ||||||||||||||| |||||||||||||    
T  48603037 acctcttatatgcatgtggtaccaattcagggcatgagcccccaaaggttattgagtattaatatacttccagggcataagcc 48603119  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 33050370 - 33050286
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggca-tgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||| |||||||| |||||||||||| || ||||||||||||||||    
T  33050370 aatgcgacaatgcaatctaaacctctt-tatgcatgtggtaccaa-tcagggcagtgagcccccaacaatcatagtattaatatact 33050286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 33680750 - 33680857
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||||| | || ||||||||||||||| |||||||| ||    
T  33680750 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtaataagtattaatatacttccagggcatcaa 33680849  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  33680850 gcccccaa 33680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 285
Target Start/End: Complemental strand, 18394394 - 18394235
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||||||| |||  ||||| || |||  |||||||||||| || |||||||||||||       | ||| ||||||||| ||| ||||||||| |     
T  18394394 catctttgataaacaatcatcaattaatcacatcattcaatcatcatcaataacataacat-------tctttgactcgacaaatgcaacaatgcaaata 18394302  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    |||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  18394301 taaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 18394235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 21753791 - 21753898
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccc-caacattat-agtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| |||||||| | |||| |||| | || ||||||||||||||| |||||||| ||    
T  21753791 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaacccctcaacgtaataagtattaatatacttccagggcatcaa 21753890  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  21753891 gcccccaa 21753898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 22922246 - 22922139
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| |||||||| ||    
T  22922246 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaa 22922147  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  22922146 gcccccaa 22922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 34509524 - 34509629
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaac---attatagtattaatatactttca 289  Q
    ||||||||||| ||||||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |   |||  ||||||||||||||| ||    
T  34509524 actcgacaatgtgacaatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctatttgagtattaatatacttcca 34509623  T
Q  290 gggcat 295  Q
    ||||||    
T  34509624 gggcat 34509629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 52634787 - 52634874
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  52634787 tcaacataaacatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 52634874  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 20248025 - 20248121
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  20248025 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 20248121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 1009724 - 1009803
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  1009724 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 1009803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 1926258 - 1926179
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  1926258 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 1926179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 20925272 - 20925193
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  20925272 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 20925193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 45490081 - 45490013
Alignment:
Q  214 aatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    |||||||||||||   |||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  45490081 aatctaaacctct---atgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 45490013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 21172712 - 21172831
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgac-aatgcgacaatgcaatct 218  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||       ||  ||||||| |||||||||||||||  |    
T  21172712 catctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacatct-------ttagactcgacaaatgcgacaatgcaactt 21172803  T
Q  219 aaacctcttatatgcatctggtgccaat 246  Q
    | ||||||||||||||| |||| |||||    
T  21172804 agacctcttatatgcatgtggtaccaat 21172831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 50210595 - 50210534
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat 255  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| ||||||||    
T  50210595 actcgacaatgtgactatgcaacttatacctcttatatgcatgtggtaccaatccagggcat 50210534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 36819704 - 36819640
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt 184  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| ||  ||||||||||||||||    
T  36819704 catctttgataaacaattatcaagtaatcacagcattcaatcatcatctataacataacatcttt 36819640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 21998 - 21772
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||| ||||||||||  ||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||  |||  |||    
T  21998 caacataaacatcataaacatcattgcatctttgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacatcttaacatcattt 21899  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  21898 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattttagtattaatatactttcaagg 21799  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    ||||||||||||| |||||||||||||    
T  21798 cataagcccccaacaattattttgagc 21772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 23047 - 22940
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || | ||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| |||||||| ||    
T  23047 aatgcgactatgcaacttagatctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaa 22948  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  22947 gcccccaa 22940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 88 - 319
Target Start/End: Original strand, 34 - 265
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||| ||| ||| |||||||||||||  |||||||||||||||||||||    
T  34 acatcttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaggtaatcacttcattcaatcatcgtaaataacataacatctttca 133  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
    |  ||| |||||||||||| ||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  134 tcatttgactcgacaatgc-acaatgcaacctaaacctcttatatgcatgcggtaccaattcagggcatgagcccctagcattatagtattaatatactt 232  T
Q  287 tcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||| |||||||||||||    
T  233 tcagggcataagcccccaacaattattttgagc 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 16349136 - 16348911
Alignment:
Q  95 caacataatcatcttaaacatcatac-atctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| ||||||||||||||||  ||| |||||||| |||||||||||| ||| |||||||||| || |||||||||||||||||||  |||  |||    
T  16349136 caacataaacatcttaaacatcatagtatcattgataataaaatatcaagtaatcacttcattcaattatcataaataacataacatcttaacatcattt 16349037  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16349036 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccagcattatagtattaatatactttcaggg 16348937  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    |||||||||||||  ||||||||||||    
T  16348936 cataagcccccaa-cattattttgagc 16348911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 16357424 - 16357199
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||||||| || |||||||||||||||||||  |||  |||    
T  16357424 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaattatcataaataacataacatcttaacatcattt 16357325  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  16357324 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccagcattacagtattaatatacttttaggg 16357225  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    |||||||| ||||  ||||||||||||    
T  16357224 cataagcctccaa-cattattttgagc 16357199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 88 - 319
Target Start/End: Complemental strand, 16488556 - 16488325
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||| ||| ||| ||||| ||||||| ||||| ||||||||||||||||    
T  16488556 acatcttcaacataagcatcttaaacatcataacatcattgataataaaatatcaggtaatcacttcatccaatcatcataaacaacataacatctttca 16488457  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
    |  ||| |||||||||||| |||||||||  || ||||||||||||||| |||| ||||| ||||| |||||||||||||||| ||||||||||||||||    
T  16488456 tcatttgactcgacaatgcaacaatgcaacttagacctcttatatgcatgtggtaccaatacagggaatgagcccccaacattttagtattaatatactt 16488357  T
Q  287 tcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||  ||||||||||||    
T  16488356 tcagggcataagcccccaa-cattattttgagc 16488325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 5339442 - 5339224
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||  |||||||||||||||| |||| ||||||||  ||||||||| | ||| ||||||||||||| || || ||||||||||||||       |     
T  5339442 caacatatacatcttaaacatcatagcatcattgataatataatatcaagcaatcacttcattcaatcatcatcaacaacataacatcttt-------tg 5339350  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  5339349 actcgacaatgcgacaatgcaacctaaaccttttatatgcatgtggtaccaattcagggcatgagcccccaacagtttagtattaatatactttcagggc 5339250  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||||||| ||||    
T  5339249 ataagcccccaacaattatttagagc 5339224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 88 - 300
Target Start/End: Original strand, 15093402 - 15093625
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataa--------c 178  Q
    ||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| ||| || || ||| |||||||||||||        |    
T  15093402 acatcttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcgtttaaacatcataaataacataatatcttaac 15093501  T
Q  179 atctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtat 276  Q
    |||||||||  ||| |||||||||||||||||| |||  || ||||||||||||||| |||| ||||| |||||||||||||| || | ||||  |||||    
T  15093502 atctttcatcatttgactcgacaatgcgacaatacaacttagacctcttatatgcatgtggtaccaatacagggcatgagccctcatcgttattgagtat 15093601  T
Q  277 taatatactttcagggcataagcc 300  Q
    |||||||||| |||||||||||||    
T  15093602 taatatacttccagggcataagcc 15093625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 12569739 - 12569870
Alignment:
Q  176 aacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---a 272  Q
    ||||||||||||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||   |    
T  12569739 aacatctttcatcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttatttga 12569838  T
Q  273 gtattaatatactttcagggcataagccccca 304  Q
    |||||||||||||| |||||||||||||||||    
T  12569839 gtattaatatacttccagggcataagccccca 12569870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 304
Target Start/End: Complemental strand, 15122283 - 15122063
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt----tcattg 189  Q
    |||||||| |||||| ||||||||| |||  |||||||| |||||||||||| ||| |||||| || ||| ||||||  |||||||||||    |||||     
T  15122283 caacataaacatcttcaacatcatagcattattgataataaaatatcaagtaatcacttcatttaaacatcataaatctcataacatcttaacatcattc 15122184  T
Q  190 ttta---actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatata 283  Q
     | |   ||| ||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||   ||| |||||||||||||    
T  15122183 atcattgacttgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttattttagtattaatata 15122084  T
Q  284 ctttcagggcataagccccca 304  Q
    |||||||||||| ||||||||    
T  15122083 ctttcagggcatgagccccca 15122063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 287
Target Start/End: Complemental strand, 15353753 - 15353577
Alignment:
Q  105 atcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa- 202  Q
    ||||||||||||||  |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||||||||       | |||||||||     
T  15353753 atcttaaacatcattgcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaa 15353661  T
Q  203 tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||| ||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  15353660 tgcgacaatacaaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 15353577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 13813532 - 13813450
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  13813532 cgacaatgcaaccaaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacatcatagtattaatatacttt 13813450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 12423446 - 12423547
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  12423446 actcgactatgcgactatgcaacttagacctcttatatgcatttggtaccaattcaggacatgagcccccaacatcatagtattaatatacttttagggc 12423545  T
Q  294 at 295  Q
    ||    
T  12423546 at 12423547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 631334 - 631243
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    ||||| ||||||||| | |||| |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  631334 aatgcaacaatgcaaccaaaacttcttatatgcatgtggtaccaattcagggcatgagcccccaacatcatagtattaatatacttttaggg 631243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 23843219 - 23843332
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  23843219 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 23843318  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  23843319 ggcataagccccca 23843332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 15125417 - 15125304
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| || |||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  15125417 actcgactattcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 15125318  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  15125317 ggcataagccccca 15125304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 17048659 - 17048574
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||| |||||||    
T  17048659 acctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttattgagtattaatatacttccagggcatatgccccca 17048574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 249
Target Start/End: Complemental strand, 13818198 - 13818051
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaa 194  Q
    ||||| |||||||||||||| ||| |||| |||||||| |||||||||| | ||||||||||| |||||  ||| |||||||||| | ||       | |    
T  13818198 aacatcatcatcttaaacataatagcatcattgataataaaatatcaagcaatcatttcattctatcatcgtaattaacataacaacatt-------tga 13818106  T
Q  195 ctcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattca 249  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||| ||||||||    
T  13818105 ctcgacaatgcgacaatgcaaccaaaacctcttatatgcatgtggtaccaattca 13818051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 44675373 - 44675486
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||| |||||||||||| |   |||  ||||||||||||||| |||    
T  44675373 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcaggacatgagcccccatcgctatttgagtattaatatacttccag 44675472  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  44675473 ggcataagccccca 44675486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 13569244 - 13569356
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||| |||||||||||||||||| |   |||  ||||||||||||||| |||    
T  13569244 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaa-tcagggcatgagcccccatcgctatttgagtattaatatacttccag 13569342  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  13569343 ggcataagccccca 13569356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 11250927 - 11250831
Alignment:
Q  190 tttaactcgacaa-tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  11250927 tttaactcgacaaatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 11250831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 25555244 - 25555324
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatat 282  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |||||||||||||| || |||||||||||||    
T  25555244 aatgcgacaatgcaatctaaacctctt-tatgcatgtggtaccaa-tcaggacatgagcccccaacaatcatagtattaatat 25555324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 13813627 - 13813543
Alignment:
Q  96 aacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||| | ||||||||||| |||||  ||| ||||||||||    
T  13813627 aacataatcatcttaaacatcatagcatcattaataataaaatatcaagcaatcatttcattctatcatcgtaattaacataaca 13813543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 16352206 - 16352122
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| ||||||||||||||  |||| ||||  |||| |||||||||||| |||||||| ||||||||||||||||||    
T  16352206 aatgcgacaatgcaaatctaaacctcttat--gcatgtggtagcaat-cagggcatgagctcccaacatcatagtattaatatacttt 16352122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 13813400 - 13813353
Alignment:
Q  248 cagggcatgagcccccaacattatagtattaatatactttcagggcat 295  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  13813400 cagggcatgagcccccaacatcatagtattaatatacttttagggcat 13813353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 13818002 - 13817961
Alignment:
Q  246 ttcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  13818002 ttcagggcatgagcccccaacatcatagtattaatatacttt 13817961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 14224 - 14132
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||| ||||||  |||||||||||||||||| |||| ||||||||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  14224 cgactatgcaacttaaacctcttatatgcatgtggtaccaattcagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 14132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 14053673 - 14053565
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaac---attatagtattaatatactttcagggcat- 295  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |   ||| |||||||||||||||| ||||||||     
T  14053673 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatacagggcatcaagcccccatcgctattttagtattaatatacttccagggcatc 14053574  T
Q  296 aagccccca 304  Q
    |||||||||    
T  14053573 aagccccca 14053565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 12288584 - 12288492
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||| ||||||  |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  12288584 cgactatgcaacttaaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 12288492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 5757915 - 5757836
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  5757915 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 5757836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 9555531 - 9555610
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  9555531 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 9555610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 12486686 - 12486765
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  12486686 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 12486765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 14758531 - 14758452
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  14758531 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 14758452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 14955296 - 14955217
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  14955296 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 14955217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 25688904 - 25688983
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  25688904 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 25688983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 33741301 - 33741380
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  33741301 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 33741380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 39706651 - 39706564
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aagcccccaa 305  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| |||||||| ||||||||||    
T  39706651 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaagcccccaa 39706564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 36134345 - 36134282
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt 184  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||||    
T  36134345 catctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacatcttt 36134282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 52243553 - 52243477
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  52243553 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 52243477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 88 - 314
Target Start/End: Original strand, 5230 - 5458
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-c 185  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||| || ||| |||||||||||||  ||||||||||||||||||  |    
T  5230 acatcttcaacataatcatcttaaacatcatagcatcattgataataaaatatcaattaatcacttcattcaatcatcgtaaataacataacatcttaac 5329  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||  ||| |||||||||||||||||||||| ||||||||||||||||||| |||| |||||  ||||||||||||||||||| | |||||||||||||||    
T  5330 atcatttgactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatatagggcatgagcccccaacagtttagtattaatatact 5429  T
Q  286 ttcagggcataagcccccaagaattattt 314  Q
    |||||||||||||||||||| ||||||||    
T  5430 ttcagggcataagcccccaacaattattt 5458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 88 - 314
Target Start/End: Original strand, 6425 - 6653
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-c 185  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||| || ||| |||||||||||||  ||||||||||||||||||  |    
T  6425 acatcttcaacataatcatcttaaacatcatagcatcattgataataaaatatcaattaatcacttcattcaatcatcgtaaataacataacatcttaac 6524  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||  ||| |||||||||||||||||||||| ||||||||||||||||||| |||| |||||  ||||||||||||||||||| | |||||||||||||||    
T  6525 atcatttgactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaatatagggcatgagcccccaacagtttagtattaatatact 6624  T
Q  286 ttcagggcataagcccccaagaattattt 314  Q
    |||||||||||||||||||| ||||||||    
T  6625 ttcagggcataagcccccaacaattattt 6653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 1473 - 1699
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||  |||  |||    
T  1473 caacataaacatcttaaacatcattgcatctttggtaatcaaatatcaagtaatcacttcattcaatcatcacaaataacataacatcttaacatctttt 1572  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  1573 gactcgacaatacgacaatgcaacctaaacctcttatatgcatatggtaccaattcagggcatgagcccccagcattatagtattactatacttttaggg 1672  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    ||||||||||||| ||||| |||||||    
T  1673 cataagcccccaacaattagtttgagc 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 9156 - 9382
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| |||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||  |||  |||    
T  9156 caacataaacatcttaaacatcattgcatctttggtaatcaaatatcaagtaatcacttcattcaatcatcacaaataacataacatcttaacatctttt 9255  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
     |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  9256 gactcgacaatacgacaatgcaacctaaacctcttatatgcatatggtaccaattcagggcatgagcccccagcattatagtattactatacttttaggg 9355  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    ||||||||||||| ||||| |||||||    
T  9356 cataagcccccaacaattagtttgagc 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 88 - 305
Target Start/End: Original strand, 42273 - 42484
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttca 186  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||| |||||||||||   || ||||||| ||||| ||||||||||||||||| ||      
T  42273 acatcttcaacataatcatcttaaacatcatagcatcattgataataaaatatcaagttaccacttcattctatcatcataaataacataacatcatt-- 42370  T
Q  187 ttgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactt 286  Q
         | |||||| ||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42371 -----tgactcgataatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattatagtattaatatactt 42465  T
Q  287 tcagggcataagcccccaa 305  Q
    |||||||||||||||||||    
T  42466 tcagggcataagcccccaa 42484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 25177 - 25082
Alignment:
Q  201 aatgcgacaatgcaatctaaacct-cttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat 295  Q
    ||||| ||||||||| | |||||| ||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  25177 aatgcaacaatgcaaccaaaacctacttatatgcatgtggtaccaattcagggcatgagccccaaacatcatagtattaatatacttttagggcat 25082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 1945 - 1729
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| | | ||||||| ||||| |||||||||||||||||    ||||        
T  1945 caacataaacatcttaaacatcataacatcattgataataaaatatcaagtaattacttcattctatcatcataaataacataacatc----attg---- 1854  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1853 actcgacaatgcgacaatgcaacctaaacctcatatatgcatgtggtaccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 1754  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    ||||||||||||  ||||||||||||    
T  1753 ataagcccccaa-cattattttgagc 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 19754 - 19536
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||  |||||||||||||||| |||| ||||||||  ||||||||| | ||| ||||||||||||| || || ||||||||||||||       |     
T  19754 caacatatacatcttaaacatcatagcatcattgataatataatatcaagcaatcacttcattcaatcatcatcaacaacataacatcttt-------tg 19662  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  19661 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccaacagtttagtattaatatactttcagggc 19562  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    |||||||||||| |||||||||||||    
T  19561 ataagcccccaacaattattttgagc 19536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 95 - 314
Target Start/End: Original strand, 1451 - 1664
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||  |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||||||||       |     
T  1451 caacataaacatcttaaacatcattgcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tg 1543  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||| ||||||||||||||| ||||||||||||||||||| ||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  1544 actcgaaaatgcgacaatgcaacctaaacctcttatatgcatgtggtatcaattcatggcatgagcgcccaacattatagtattaatatactttcagggc 1643  T
Q  294 ataagcccccaagaattattt 314  Q
    |||||||||||| ||||||||    
T  1644 ataagcccccaacaattattt 1664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 17591 - 17359
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataac--------atctttc 185  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||        |||||||    
T  17591 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataactacttaacatctttc 17492  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||  ||| |||||||||||||| |||||||  || ||||||||||||||| |||| | ||| |||||||||||||||||||| | |||||||||||||||    
T  17491 atcatttgactcgacaatgcgataatgcaacttagacctcttatatgcatgtggtactaatacagggcatgagcccccaacaatttagtattaatatact 17392  T
Q  286 ttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||||  ||||||||||||    
T  17391 ttcagggcataagcccccaa-cattattttgagc 17359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 7610 - 7378
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--------tc 185  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| | ||||||| ||| |||||||||||||||||||        ||    
T  7610 caacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcactacattcaaacatcataaataacataacatcttaacatctttc 7511  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    ||  ||| ||||||||||||||||||||||  || ||||||||||||||| |||  ||||| |||||||||||||||||||||| ||||||||||| |||    
T  7510 atcatttgactcgacaatgcgacaatgcaacttagacctcttatatgcatgtggaaccaatacagggcatgagcccccaacattttagtattaataaact 7411  T
Q  286 ttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||||  ||||||||||||    
T  7410 ttcagggcataagcccccaa-cattattttgagc 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 94 - 319
Target Start/End: Complemental strand, 47210 - 46977
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--------t 184  Q
    ||||||||| |||||||||||||||| |||| |||||| | |||||||||||| ||| ||||||||||||| |||||||||||||||||||        |    
T  47210 tcaacataagcatcttaaacatcatagcatcattgatattaaaatatcaagtaatcacttcattcaatcatcataaataacataacatcttaacatcttt 47111  T
Q  185 cattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatac 284  Q
    |||  ||| |||||||||||  ||||||| |  || ||||||||||||||| |||| ||||| |||||||| ||||||||||||| ||||||||||||||    
T  47110 catcatttgactcgacaatgaaacaatgcgacttagacctcttatatgcatgtggtaccaatacagggcataagcccccaacattttagtattaatatac 47011  T
Q  285 tttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||| |||  ||||||||||||    
T  47010 tttcagggcataagccctcaa-cattattttgagc 46977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 88 - 304
Target Start/End: Complemental strand, 5296 - 5069
Alignment:
Q  88 acatcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--- 183  Q
    ||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||| |||||| |||||||||||||||||||       
T  5296 acatcttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcatttaatcatcataaataacataacatcttaac 5197  T
Q  184 -----tcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtat 276  Q
         ||||  ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| ||||| ||||||||||| ||||||  |||||    
T  5196 atctttcatcatttgactcgacgatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggtatgagcccccatcattattgagtat 5097  T
Q  277 taatatactttcagggcataagccccca 304  Q
    |||||||||| |||||||||||||||||    
T  5096 taatatacttccagggcataagccccca 5069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 33194 - 33420
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttc-attgttt 192  Q
    |||||||  ||||||||| |||||| |||| ||||||||  ||||||||| | ||| ||||||||||||| || || ||||||||||||||  | |        
T  33194 caacatatacatcttaaaaatcatagcatcattgataatataatatcaagcaatcacttcattcaatcatcatcaacaacataacatcttttgactcaac 33293  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    ||  ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||| ||| | |||||||||||||| |||||||    
T  33294 aatgcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtacgaattcagggcatgagcccccgacagtttagtattaatatacattcaggg 33393  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    ||||||||||||| |||||||||||||    
T  33394 cataagcccccaacaattattttgagc 33420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 95 - 303
Target Start/End: Complemental strand, 16942 - 16740
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||  |||||||| ||||||  |||| ||||||||  ||||||||| | ||| ||||||||||||| || || ||||||||||||||       |     
T  16942 caacatatacatcttaatcatcattgcatcattgataatataatatcaagcaatcacttcattcaatcatcatcaacaacataacatcttt-------tg 16850  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  16849 actcgacaatgcgacaatgcaacctaaaccttttatatgcatgtggtaccaattcagggcatgagcccccaactgtttagtattaatatactttcagggc 16750  T
Q  294 ataagccccc 303  Q
    ||||||||||    
T  16749 ataagccccc 16740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 19062 - 18977
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaac--attatagtattaatatactttcagggcataagccccca 304  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||    
T  19062 acctcctatatgcatgtggtaccaattcagggcatgagcccccaacatattttagtattaatatactttcagggcataagacccca 18977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 6777 - 6653
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  6777 actcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaattcagggcatgagcccccggcattatagtattaatatacttttagggc 6678  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    ||||||||||||  ||||||||||||    
T  6677 ataagcccccaa-cattattttgagc 6653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 14189 - 14036
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatcttt-cattgttt 192  Q
    |||||||| ||||||| || ||||  |||| |||||||| |||||||||||| ||| |||||||||| || |||||||||||||||||||  |||  |||    
T  14189 caacataaacatcttatacttcattgcatcattgataataaaatatcaagtaatcacttcattcaattatcataaataacataacatcttaacatcattt 14090  T
Q  193 aactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaat 246  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  14089 gactcgacaatgcgacaatgcaacctaaacctcttatatgcatgtggtaccaat 14036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 8217 - 8349
Alignment:
Q  104 catcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa 202  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||   || |||||||||    
T  8217 catcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacatctttcatcaattgactcgacaa 8316  T
Q  203 tgcgacaatgcaatctaaacctcttatatgcat 235  Q
    ||||||||||||| |||||||||||||||||||    
T  8317 tgcgacaatgcaacctaaacctcttatatgcat 8349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 8351 - 8407
Alignment:
Q  263 caacattatagtattaatatactttcagggcataagcccccaagaattattttgagc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8351 caacattatagtattaatatactttcagggcataagcccccaacaattattttgagc 8407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 120 - 314
Target Start/End: Complemental strand, 195356 - 195168
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-tc 217  Q
    |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||||||||||       | ||||||||| ||||||||||||| ||    
T  195356 catctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaatc 195264  T
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattt 314  Q
    |||  ||||||||||||| |||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||    
T  195263 taagactcttatatgcatgtggtaccaat-cagggcatgagcccccaacagtttagtattaatatactttcagggcataagcccccaacatttattt 195168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 95 - 287
Target Start/End: Complemental strand, 414506 - 414318
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtac-tcatttcattcaatcataataaataacataacatctttcattgttt 192  Q
    |||||||| |||||||||||||||  |||||||||||| ||| |||||||||  |||  |||||||||||| || |||||||||||||||||       |    
T  414506 caacataaacatcttaaacatcattgcatctttgataaacaattatcaagtaaatcacatcattcaatcatcatcaataacataacatcttt-------t 414414  T
Q  193 aactcgacaa-tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
     ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  414413 gactcgacaaatgcgacaatgcaaatctaaacctcttatatgcatgtggtgccaat-cagggcatgagcccccaacatcatagtattaatatacttt 414318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 15585 - 15465
Alignment:
Q  194 actcgacaatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||| | ||||||||||||||||| ||||    
T  15585 actcgacaatgcgacaatgcaaatctaaacctcttatatgcatgtggtaccaatt-agggcatgagcccccaacaatttagtattaatatacttttaggg 15487  T
Q  293 cataagcccccaagaattattt 314  Q
    ||||||||||||| ||||||||    
T  15486 cataagcccccaacaattattt 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 20107 - 19987
Alignment:
Q  194 actcgacaatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||| | ||||||||||||||||| ||||    
T  20107 actcgacaatgcgacaatgcaaatctaaacctcttatatgcatgtggtaccaatt-agggcatgagcccccaacaatttagtattaatatacttttaggg 20009  T
Q  293 cataagcccccaagaattattt 314  Q
    ||||||||||||| ||||||||    
T  20008 cataagcccccaacaattattt 19987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 193352 - 193239
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||  |||||||||||||||||||||||   ||||||||||||||| |||    
T  193352 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaatatagggcatgagcccccaacattatttgagtattaatatacttccag 193253  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  193252 ggcatgagccccca 193239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 95 - 319
Target Start/End: Complemental strand, 2543 - 2332
Alignment:
Q  95 caacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    ||||||||  |||||||| |||||| ||||||||||||| |||||||||||| ||| |  ||||||         |||||||||||||||||||  |||     
T  2543 caacataaatatcttaaaaatcataacatctttgataataaaatatcaagtaatcactatattcaa---------ataacataacatctttcatcatttg 2453  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggc 293  Q
    |||||||||||||||||  |||  || ||||||||||||||| |||| ||||| ||||||||||||||||    ||||||||||||||||||||||||||    
T  2452 actcgacaatgcgacaacacaacttagacctcttatatgcatgtggtaccaatacagggcatgagccccc----ttatagtattaatatactttcagggc 2357  T
Q  294 ataagcccccaagaattattttgagc 319  Q
    ||||||||||||  ||||||||||||    
T  2356 ataagcccccaa-cattattttgagc 2332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 74126 - 74014
Alignment:
Q  207 acaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaag 306  Q
    ||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||     
T  74126 acaatgcaacctaaacctcttatatgcatgtggtaccaatacagggcatgagcccccagcattattgtattaatatacttttagggcataagcccccaac 74027  T
Q  307 aattattttgagc 319  Q
    |||||||||||||    
T  74026 aattattttgagc 74014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 14832 - 14957
Alignment:
Q  194 actcgacaatgcgacaa-tgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    ||||||||||||||||| |||||  || ||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  14832 actcgacaatgcgacaaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacaatttagtattaatatactttcaggg 14931  T
Q  293 cataagcccccaagaattattttgagc 319  Q
    |||||||||||||  ||||||||||||    
T  14932 cataagcccccaa-cattattttgagc 14957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 304
Target Start/End: Complemental strand, 38936 - 38742
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt--------tcattgtttaactcgacaatgcgacaat 211  Q
    |||| |||||||| |||| ||||||| ||| ||||||  ||||| |||||||||||||||||||        ||||   || ||||||||||| ||||||    
T  38936 catcattgataataaaatgtcaagtaatcacttcatttgatcatcataaataacataacatcttaacatccttcatcacttgactcgacaatgtgacaat 38837  T
Q  212 gcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagggcataagccccca 304  Q
    |||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||    
T  38836 gcaacctagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattgagtattaatatacttctagggcataagccccca 38742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 29245 - 29183
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatct 182  Q
    |||| |||||||| |||| ||||||| ||| |||||| |||||| ||||||||||||||||||    
T  29245 catcattgataataaaatgtcaagtaatcacttcatttaatcatcataaataacataacatct 29183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 34317 - 34146
Alignment:
Q  88 acatcatcaacataatcatcttaaa-catcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttc 185  Q
    ||||| ||||||||||||||||||| ||||||| |||| |||||||| || ||||||||| ||| ||||||||||||| |||||||||||||||||        
T  34317 acatcttcaacataatcatcttaaaacatcatagcatcattgataataaattatcaagtaatcacttcattcaatcatcataaataacataacatc---a 34221  T
Q  186 attgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagccccca 264  Q
    ||||    |||||||||||||||||||||| ||||| |||| |||||||| |||| |||||||||| ||||||||||||    
T  34220 attg----actcgacaatgcgacaatgcaacctaaatctctcatatgcatgtggtaccaattcaggacatgagccccca 34146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 304
Target Start/End: Original strand, 1998 - 2131
Alignment:
Q  173 cataacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat- 271  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||  || ||||||||||||||| |||| | ||| ||||||||||||||||||| ||||     
T  1998 cataacatctttcattatttgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtacaaatacagggcatgagcccccaactttatt 2097  T
Q  272 -agtattaatatactttcagggcataagccccca 304  Q
     ||||||||||||||| |||||||||||||||||    
T  2098 gagtattaatatacttccagggcataagccccca 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 95 - 318
Target Start/End: Original strand, 1136 - 1362
Alignment:
Q  95 caacataatcatcttaaacatcatac-atctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||||   |||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||   ||     
T  1136 caacataaacatcttaaacatcattgtatctttgaaaatcaaatatcaagtaatcacttcattcaatcatcataaataacataacatctttcatcaattg 1235  T
Q  194 actcgacaatgcgacaatgcaatctaaacctcttata-tgcatctggtgccaattcagggcatgagc-ccccaacattatagtattaatatactttcagg 291  Q
    ||||||||||||||||||| || |||||||||||  |  ||||  |   ||||         ||||| ||||| ||||||||||||||||||||||||||    
T  1236 actcgacaatgcgacaatgtaacctaaacctctttcagggcataagcccccaacaattattttgagccccccagcattatagtattaatatactttcagg 1335  T
Q  292 gcataagcccccaagaattattttgag 318  Q
    |||||||||||||| ||||||||||||    
T  1336 gcataagcccccaacaattattttgag 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 1267 - 1302
Alignment:
Q  284 ctttcagggcataagcccccaagaattattttgagc 319  Q
    |||||||||||||||||||||| |||||||||||||    
T  1267 ctttcagggcataagcccccaacaattattttgagc 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 201 - 314
Target Start/End: Original strand, 68627 - 68740
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagc 299  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  68627 aatgcgacaatgcaaatctaaacctcttatatgcatgtggtaccaat-cagggcatgagcccccaacagtttagtattaatatactttcagggcataagc 68725  T
Q  300 ccccaagaattattt 314  Q
    |||||| | ||||||    
T  68726 ccccaacatttattt 68740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 104 - 304
Target Start/End: Complemental strand, 35392 - 35180
Alignment:
Q  104 catcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat--------ctttcattgtttaa 194  Q
    |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||| || ||| ||||||||| ||||||        |||||||  ||| |    
T  35392 catcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcatttaaacatcataaataacctaacattttaacatctttcatcatttga 35293  T
Q  195 ctcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagg 291  Q
    |||||||||||||||||||||  || ||||||||||||||| |||| ||||| || ||||||||||||||   ||||   ||||||||||||||| ||||    
T  35292 ctcgacaatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacaaggcatgagcccccattgttatttgagtattaatatacttccagg 35193  T
Q  292 gcataagccccca 304  Q
    |||||||||||||    
T  35192 gcataagccccca 35180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 120 - 314
Target Start/End: Complemental strand, 7714 - 7525
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcatt-caatcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-t 216  Q
    ||||||| |||| ||| ||||||||| |||  ||||| ||||||| || |||||||||||||||||       | | ||||||| ||||||||| ||| |    
T  7714 catcttttataaacaattatcaagtaatcacatcatttcaatcatcatcaataacataacatcttt-------tgattcgacaaatgcgacaattcaaat 7622  T
Q  217 ctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattt 314  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||    
T  7621 ctaaacctcttatatgcatgtggtaccaatt-agggcatgagcccccaacagtttagtattaatatactttcagggcataagcccccaacatttattt 7525  T

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Target: scaffold0001 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 422895 - 422802
Alignment:
Q  194 actcgacaatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  422895 actcgacaatgcgacaatgcaaatctaaacctcttatatgcatctggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 204607 - 204733
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--a 272  Q
    |||||||||||||| || | |||||| |||||||| |||||  || || |||||||||||| |||| ||||| ||||||||||||||||  | || |  |    
T  204607 taacatctttcattattga-ctcgactatgcgacagtgcaacttagacatcttatatgcatgtggtaccaatacagggcatgagcccccgtcgttgttga 204705  T
Q  273 gtattaatatactttcagggcataagcc 300  Q
    |||||||||||||| |||||||||||||    
T  204706 gtattaatatacttccagggcataagcc 204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 173004 - 173067
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt 183  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || ||||||||||||||||    
T  173004 catctttgataaacaattatcaagtaatcacagcattcaatcatcatcaataacataacatctt 173067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 281271 - 281158
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  281271 actcgaccatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcag 281172  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  281171 ggcatgagccccca 281158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 7135 - 7321
Alignment:
Q  95 caacataatcatcttaaacatca-tacatctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgttta 193  Q
    |||||||| |||||||||||||| | |||||||||||| ||| ||||||||| |||  |||||||||||| || |||||||||        |||  |||     
T  7135 caacataaacatcttaaacatcaatgcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacata--------catgttttg 7226  T
Q  194 actcgacaa-tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||| ||||||||||||| | |||||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  7227 actcgacaaatgcgacaatgcaaatataaacctcttatatgcatgtggtaccaat-cagggcatgagccctcaacatcatagtattaatatacttt 7321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 2585 - 2687
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcagggcataagccc 301  Q
    |||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  2585 cgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcagggcatgagccc 2684  T
Q  302 cca 304  Q
    |||    
T  2685 cca 2687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 6251 - 6353
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcagggcataagccc 301  Q
    |||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||||||   | ||||||||||||||||||||||| |||||    
T  6251 cgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattatttttgtattaatatactttcagggcatgagccc 6350  T
Q  302 cca 304  Q
    |||    
T  6351 cca 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 23402 - 23533
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--a 272  Q
    ||||||||||||||  || ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||  |    
T  23402 taacatctttcattaattgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattga 23501  T
Q  273 gtattaatatactttcagggcataagccccca 304  Q
    |||||||||||||| ||||| |||||||||||    
T  23502 gtattaatatacttccagggaataagccccca 23533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 14386 - 14516
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--a 272  Q
    ||||||||||||||  || ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||  |    
T  14386 taacatctttcattaattgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattga 14485  T
Q  273 gtattaatatactttcagggcataagccccc 303  Q
    |||||||||||||| ||||| ||||||||||    
T  14486 gtattaatatacttccagggaataagccccc 14516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 38826 - 38956
Alignment:
Q  175 taacatctttcattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--a 272  Q
    ||||||||||||||  || ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| | ||||  |    
T  38826 taacatctttcattaattgactcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcgttattga 38925  T
Q  273 gtattaatatactttcagggcataagccccc 303  Q
    |||||||||||||| ||||| ||||||||||    
T  38926 gtattaatatacttccagggtataagccccc 38956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 120 - 314
Target Start/End: Complemental strand, 27566 - 27377
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaa-tcataataaataacataacatctttcattgtttaactcgacaa-tgcgacaatgcaa-t 216  Q
    |||||||||||| ||| |||| |||| |||  ||||| || |||| || |||||||||||||||||       | ||||||||| ||||||||||||| |    
T  27566 catctttgataaacaattatcgagtaatcacatcatttaaatcatcatcaataacataacatcttt-------tgactcgacaaatgcgacaatgcaaat 27474  T
Q  217 ctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcataagcccccaagaattattt 314  Q
    ||||||||||||||||||| |||| ||||| ||||| ||||||||||||   | ||||||||||||||||||||||||||||||||||| | ||||||    
T  27473 ctaaacctcttatatgcatgtggtaccaat-cagggtatgagcccccaagtgtttagtattaatatactttcagggcataagcccccaacatttattt 27377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 16724 - 16611
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||||||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  16724 actcgactatgcgacaatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 16625  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  16624 ggcataagccccca 16611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 4173 - 4275
Alignment:
Q  194 actcgacaatgcgacaa-tgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcaggg 292  Q
    ||||||||||||||||| |||||  || ||||||||||| ||| |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  4173 actcgacaatgcgacaaatgcaacttagacctcttatatacatgtggtaccaattcagggcatgaacccccaacattttagtattaatatactttcaggg 4272  T
Q  293 cat 295  Q
    |||    
T  4273 cat 4275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 2241 - 2393
Alignment:
Q  90 atcatcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcatt 188  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||| |||| |||||||||| |           
T  2241 atcaacaacataatcatcttaaacatcatagcatcattgataataaaatatcaagtaatca-ctcattcaatcatcataattaacataacaac------- 2332  T
Q  189 gtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattca 249  Q
     ||| |||||||||||||||||||||| | ||||||||||||||||| |||| ||||||||    
T  2333 atttgactcgacaatgcgacaatgcaaccaaaacctcttatatgcatgtggtaccaattca 2393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 8171 - 8077
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatactttcagggcat 295  Q
    ||||| ||||||||| | ||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  8171 aatgcaacaatgcaaccaaaacctcttatatgcatgtggtaccaattcagggcattagcccccaacatcatagtattaatatacttttagggcat 8077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 287
Target Start/End: Complemental strand, 10741 - 10566
Alignment:
Q  105 atcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa- 202  Q
    ||||||||||||||  |||||||||||| ||| ||||||||| |||  | |||||||||| || |||||||||||||||||       | |||||||||     
T  10741 atcttaaacatcattgcatctttgataaacaattatcaagtaatcacat-attcaatcatcatcaataacataacatcttt-------tgactcgacaaa 10650  T
Q  203 tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||| |||| ||||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10649 tgcgacaatgcaaatctagacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 10566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 2791 - 2706
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| |||| ||||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  2791 aatgcgacaatgcaaatctagacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacatcatagtattaatatacttt 2706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 10893 - 10780
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  10893 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 10794  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  10793 ggcataagccccca 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 16053 - 15941
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagg 291  Q
    ||||||| ||||||| ||||||  || ||||| ||||||||| |||| |||||||||||||| |||||||| | ||||  ||||||||||||||| ||||    
T  16053 actcgactatgcgactatgcaacttagacctcctatatgcatgtggtaccaattcagggcataagcccccatcgttattgagtattaatatacttccagg 15954  T
Q  292 gcataagccccca 304  Q
    |||||||||||||    
T  15953 gcataagccccca 15941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 22180 - 22067
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||| ||||||||| ||||  ||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  22180 actcgactatgcgactatgcaacttagacctcgtatatgcatgtggtatcaattcagggcatgagcccccaacattattttagtattaatatactttcag 22081  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  22080 ggcatgagccccca 22067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 30072 - 29959
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||| ||||||||| ||||  ||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  30072 actcgactatgcgactatgcaacttagacctcgtatatgcatgtggtatcaattcagggcatgagcccccaacattattttagtattaatatactttcag 29973  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  29972 ggcatgagccccca 29959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 32188 - 32301
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  32188 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccag 32287  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  32288 ggcataagccccca 32301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 48821 - 48708
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||||| ||||   ||||||||||||||| |||    
T  48821 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttatttgagtattaatatacttccag 48722  T
Q  291 ggcataagccccca 304  Q
    ||||| ||||||||    
T  48721 ggcatgagccccca 48708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 3287 - 3372
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattat--agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||    
T  3287 acctcttatatgcatgtggtaccaattcagggcatgagcccccaacgttattgagtattaatatacttccagggcataagccccca 3372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 7350 - 7436
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaaca-ttat--agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||   ||||  ||||||||||||||| |||||||||||||||||    
T  7350 acctcttatatgcatgtggtaccaattcagggcatgagcccccaaaggttattgagtattaatatacttccagggcataagccccca 7436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 28072 - 27993
Alignment:
Q  218 taaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  28072 taaacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 27993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 304
Target Start/End: Complemental strand, 9446 - 9225
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctt----tcat- 187  Q
    ||||||||| |||||||||||||||| ||||   |||||| | |||||||||| ||| |||||| || |||  |||||  |||||||||||    ||||     
T  9446 tcaacataagcatcttaaacatcatagcatcacagataataatatatcaagtaatcacttcattaaagcatcttaaatctcataacatcttaacatcatg 9347  T
Q  188 --tgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatat 282  Q
      |  || ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | |||    |||||||||||    
T  9346 catcattgactcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttaattgagtattaatat 9247  T
Q  283 actttcagggcataagccccca 304  Q
    |||| |||||||||||||||||    
T  9246 acttccagggcataagccccca 9225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 10260 - 10349
Alignment:
Q  218 taaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataagccccca 304  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||||||||||||| |||||||||||||||||    
T  10260 taaacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttccagggcataagccccca 10349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 3483 - 3596
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||| ||||||||| |||    
T  3483 actcgaccatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtataaatatacttccag 3582  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  3583 ggcataagccccca 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 7914 - 8027
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| | ||||   ||||| ||||||||| |||    
T  7914 actcgaccatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtataaatatacttccag 8013  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  8014 ggcataagccccca 8027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 17978 - 18091
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| || ||    ||||||||||||||| |||    
T  17978 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcaataattgagtattaatatacttccag 18077  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  18078 ggcataagccccca 18091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 304
Target Start/End: Complemental strand, 66280 - 66059
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacata--------acatcttt 184  Q
    ||||||||| |||||||||||||||| |||| | |||||| | |||||| ||| ||| |||||| |||||| ||||||  ||||        ||||||||    
T  66280 tcaacataagcatcttaaacatcatagcatcatggataataatatatcatgtaatcacttcattaaatcatcataaatttcatatcatcttaacatcttt 66181  T
Q  185 cattgtttaactcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaata 281  Q
    |||  || | |||||| ||||||| ||||||  || ||||||| ||||||| |||| ||| ||||||||||||||||||| || |||   ||||||||||    
T  66180 catcattga-ctcgactatgcgactatgcaacttagacctcttttatgcatgtggtaccatttcagggcatgagcccccatcactatttgagtattaata 66082  T
Q  282 tactttcagggcataagccccca 304  Q
    ||||| |||||||||||||||||    
T  66081 tacttccagggcataagccccca 66059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 53265 - 53384
Alignment:
Q  120 catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgac-aatgcgacaatgcaatct 218  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| || |||||||||||||||       ||  ||||||| |||||||||||||||  |    
T  53265 catctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacatct-------ttagactcgacaaatgcgacaatgcaactt 53356  T
Q  219 aaacctcttatatgcatctggtgccaat 246  Q
    | ||||||||||||||| |||| |||||    
T  53357 agacctcttatatgcatgtggtaccaat 53384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 69536 - 69649
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||    
T  69536 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccag 69635  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  69636 ggcataagccccca 69649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 1014 - 1100
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    |||||||||||||||  || ||||||||||||||| |||| ||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  1014 aatgcgacaatgcaacttagacctcttatatgcatgtggtaccaatacagggcatgagcccccatcatcatagtattaatatacttt 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 285
Target Start/End: Original strand, 1842 - 2015
Alignment:
Q  105 atcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatctttcattgtttaactcgacaa- 202  Q
    ||||||||||||||  |||||||||||| ||| ||||||||| ||| ||||||||||||| || ||||| ||||||||||        | |||||||||     
T  1842 atcttaaacatcattgcatctttgataa-caattatcaagtaatcacttcattcaatcatcatcaataatataacatcttc-------tgactcgacaaa 1933  T
Q  203 tgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatact 285  Q
    |||||||||| || |||||||||||| ||||||| |||| ||||| || ||||| |||||||||||||||||||||||||||||    
T  1934 tgcgacaatgaaaatctaaacctctt-tatgcatgtggtaccaat-caaggcattagcccccaacattatagtattaatatact 2015  T

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Target: scaffold1124 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 1652 - 1734
Alignment:
Q  225 cttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcagggcataagccccca 304  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||| ||||    
T  1652 cttatatgcatgtggtaccaattcagggcatgagcccccaacattattttagtattaatatactttcagggcatgagctccca 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 7064 - 7150
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacatta---tagtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||||||   ||||||||||||||||||||||||| ||||||||    
T  7064 acctcttatatgcatgtggcaccaattcagggtatgagcccccaacattattttagtattaatatactttcagggcatgagccccca 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 5836 - 5949
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| |||| |||||||||  || ||||||||||||||| |||| |||||||||| ||| |||||||||| ||||   ||||||||||||||| |||    
T  5836 actcgactatgcaacaatgcaacttagacctcttatatgcatgtggtaccaattcaggacataagcccccaacgttatttgagtattaatatacttccag 5935  T
Q  291 ggcataagccccca 304  Q
    ||||||||| ||||    
T  5936 ggcataagctccca 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 18830 - 18717
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| || | ||| ||||||||||||||||||| | ||||   ||||||||||||||| |||    
T  18830 actcgactatgcgactatgcaacttagacctcttatatgcatgtgttaccatttcagggcatgagcccccatcgttatttgagtattaatatacttccag 18731  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  18730 ggcataagccccca 18717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 1865 - 1942
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat 271  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  1865 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccccaacattat 1942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 4660 - 4743
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||| || ||||||||||||||||    
T  4660 aatgcgacaatgcaatctaaacctctt-tatgcatgtggtaccaa-tcagggcatgagcccccaacaatcatagtattaatatact 4743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 20417 - 20527
Alignment:
Q  199 acaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat---agtattaatatactttcagggca 294  Q
    ||||||| || ||||||  || ||||||||||||||| || | ||||| ||||||||  |||||||| | ||||   ||||||||||||||| |||||||    
T  20417 acaatgcaactatgcaacttagacctcttatatgcatgtgataccaatacagggcatcaagcccccatcgttatttgagtattaatatacttccagggca 20516  T
Q  295 t-aagccccca 304  Q
    | |||||||||    
T  20517 tcaagccccca 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 8191 - 8079
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||||||| ||||||  |||||||||||||||||| |||| || ||| |||||||||||||||| |   |||  ||||||||||||||| |||    
T  8191 actcgactatgcgactatgcaacttaaacctcttatatgcatgtggtacc-atttagggcatgagcccccatcgctatttgagtattaatatacttccag 8093  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  8092 ggcataagccccca 8079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 6441 - 6375
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  6441 acctcttatatgcatgtggtaccaatacagggcatgagccctcaacatcatagtattaatatacttt 6375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 19750 - 19836
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| |   |||  ||||||||||||||| |||||||| ||||||||    
T  19750 acctcttatatgcatgtggtaccaattcagggcatgagcccccatcgctatttgagtattaatatacttccagggcatgagccccca 19836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 415 - 497
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaaca-ttat--agtattaatatactttcagggcataagcc 300  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||   ||||  ||||||||||||||| |||||||||||||    
T  415 acctcttatatgcatgtggtaccaattcagggcatgagcccccaaaggttattgagtattaatatacttccagggcataagcc 497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 1081 - 1194
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcag 290  Q
    ||||||| ||| ||| ||||||  || ||||||| ||||||| |||| ||||||||||||||||||||||| | ||||   |||||||||||||||  ||    
T  1081 actcgactatgtgactatgcaacttagacctcttttatgcatgtggtaccaattcagggcatgagcccccatcgttatttgagtattaatatacttctag 1180  T
Q  291 ggcataagccccca 304  Q
    |||||| |||||||    
T  1181 ggcatatgccccca 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 36205 - 36310
Alignment:
Q  202 atgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcagggcataag 298  Q
    ||||||| ||||||  || ||||||||||||||| |||| | ||||||||||||||||||||| |   |||  ||||||||||||||| |||||||| ||    
T  36205 atgcgactatgcaagttagacctcttatatgcatgtggtactaattcagggcatgagcccccatcgctatttgagtattaatatacttccagggcatgag 36304  T
Q  299 ccccca 304  Q
    ||||||    
T  36305 ccccca 36310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 8323 - 8407
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  8323 aatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 8407  T

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Target: scaffold0327 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 48 - 114
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcatgagcccccaacattatagtattaatatacttt 287  Q
    ||||||||||||||| |||| ||||| ||||||||||||||| |||| | |||||||||||||||||    
T  48 acctcttatatgcatgtggtaccaatacagggcatgagcccctaacaatttagtattaatatacttt 114  T

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Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 4557 - 4473
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  4557 aatgcgacaatgcaaatctaaacctctt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 4473  T

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Target: scaffold0198 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 23587 - 23700
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac---attatagtattaatatactttcag 290  Q
    ||||||| ||| ||| ||||||  || ||||||||||||||| |||| ||||||| |||||||||| |||| |   |||  ||||||||||||| | |||    
T  23587 actcgactatgagactatgcaacttagacctcttatatgcatgtggtaccaattcggggcatgagctcccatcgctatttgagtattaatatacctccag 23686  T
Q  291 ggcataagccccca 304  Q
    ||||||||||||||    
T  23687 ggcataagccccca 23700  T

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Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 14425 - 14349
Alignment:
Q  231 tgcatctggtgccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataagccccca 304  Q
    ||||| |||| ||||| ||||||||||||||||| | ||||   ||||||||||||||| |||||||||||||||||    
T  14425 tgcatatggtaccaatacagggcatgagcccccatcgttatttgagtattaatatacttccagggcataagccccca 14349  T

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Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 17598 - 17483
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaac---attatagtattaatatactttca 289  Q
    ||||||||||| ||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  |||||||| |   |||  ||||||||||||||| ||    
T  17598 actcgacaatgtgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctatttgagtattaatatacttcca 17499  T
Q  290 gggcat-aagccccca 304  Q
    |||||| |||||||||    
T  17498 gggcatcaagccccca 17483  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 178642 - 178712
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagccccca 264  Q
    ||||||| ||||||  ||||||  || ||||||||||||||| |||| |||||||||||||||||||||||    
T  178642 actcgactatgcgagtatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagccccca 178712  T

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Target: scaffold0173 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 1063 - 995
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcatgagcccc 262  Q
    ||||||| ||||||  ||||||  || ||||||||||||||| |||| |||||||||||||||||||||    
T  1063 actcgactatgcgattatgcaacttagacctcttatatgcatgtggtaccaattcagggcatgagcccc 995  T

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Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 53922 - 53830
Alignment:
Q  205 cgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    |||| ||||||  |||||||||||||||||| |||| ||||||||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  53922 cgactatgcaacttaaacctcttatatgcatgtggtaccaattcagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 53830  T

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Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 12551 - 12616
Alignment:
Q  242 ccaattcagggcatgagcccccaacattat---agtattaatatactttcagggcataagccccca 304  Q
    ||||||||||||||||||||||||||||||   ||||||| ||||||| ||| || ||||||||||    
T  12551 ccaattcagggcatgagcccccaacattatttgagtattagtatacttccagagcgtaagccccca 12616  T

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Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 79574 - 79652
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataaca 179  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || ||||||||||||    
T  79574 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataaca 79652  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 205417 - 205333
Alignment:
Q  201 aatgcgacaatgcaa-tctaaacctcttatatgcatctggtgccaattcagggcatgagcccccaac-attatagtattaatatact 285  Q
    ||||||||||||||| ||||| ||| || ||||||| |||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  205417 aatgcgacaatgcaaatctaatcctatt-tatgcatgtggtaccaat-cagggcatgagcccccaacaatcatagtattaatatact 205333  T

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Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 65083 - 65022
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat 255  Q
    ||||||| ||||||| ||||||  || ||||||||||||||| |||| ||||||||||||||    
T  65083 actcgactatgcgactatgcaacttagacctcttatatgcatgtggtaccaattcagggcat 65022  T

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Target: scaffold0621 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 1859 - 1966
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| || ||||| ||    
T  1859 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccaaggcatcaa 1958  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  1959 gcccccaa 1966  T

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Target: scaffold0621; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 6276 - 6383
Alignment:
Q  201 aatgcgacaatgcaatctaaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aa 297  Q
    |||||||| ||||||  || ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| || ||||| ||    
T  6276 aatgcgactatgcaacttagacctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccaaggcatcaa 6375  T
Q  298 gcccccaa 305  Q
    ||||||||    
T  6376 gcccccaa 6383  T

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Target: scaffold0556 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 6582 - 6669
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aagcccccaa 305  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| |||||||| ||||||||||    
T  6582 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaagcccccaa 6669  T

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Target: scaffold0525 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 4963 - 4884
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  4963 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 4884  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 11495 - 11582
Alignment:
Q  94 tcaacataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    ||||||||| ||||||||||||||||  ||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  11495 tcaacataaacatcttaaacatcatagtatctttgataaacaactaccaagtaatcacaacattcgatcatcatcaataacataacat 11582  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 33791 - 33712
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  33791 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 33712  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 15225 - 15146
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  15225 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 15146  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 68285 - 68206
Alignment:
Q  102 atcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacat 180  Q
    |||||||||||||||||| |||||||||||| ||| || |||||| |||   ||||| ||||| || |||||||||||||    
T  68285 atcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacat 68206  T

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Target: scaffold0218 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 8433 - 8343
Alignment:
Q  218 taaacctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat-aagcccccaa 305  Q
    |||||||||||||||||| |||| |||||  |||||||  ||||| |||| | || ||||||||||||||| |||||||| ||||||||||    
T  8433 taaacctcttatatgcatgtggtaccaatctagggcatcaagccctcaacgtaataagtattaatatacttccagggcatcaagcccccaa 8343  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 20431 - 20346
Alignment:
Q  98 cataatca-tcttaaacatcata-catctttgataatcaaatatcaagtactcatttcattcaatcataataaataacataacatc 181  Q
    |||||||| |||||||||||||  |||||||||||| ||| ||||||||| |||   ||||||||||| ||  |||||||||||||    
T  20431 cataatcagtcttaaacatcattgcatctttgataaacaattatcaagtaatcacagcattcaatcatcatcgataacataacatc 20346  T

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Target: scaffold0130 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 27649 - 27725
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    ||||||||||||||| |||| ||||| ||||||||  |||||||| |  ||| ||||||||||||||| ||||||||    
T  27649 acctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctataagtattaatatacttccagggcat 27725  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 1739 - 1791
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaat 246  Q
    ||||||||||||||| ||||||  || ||||||||||||||| |||| |||||    
T  1739 actcgacaatgcgactatgcaacttagacctcttatatgcatgtggtaccaat 1791  T

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Target: scaffold0046; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 4294 - 4346
Alignment:
Q  194 actcgacaatgcgacaatgcaatctaaacctcttatatgcatctggtgccaat 246  Q
    ||||||||||||||| ||||||  || ||||||||||||||| |||| |||||    
T  4294 actcgacaatgcgactatgcaacttagacctcttatatgcatgtggtaccaat 4346  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 32297 - 32373
Alignment:
Q  221 acctcttatatgcatctggtgccaattcagggcat-gagcccccaacattat-agtattaatatactttcagggcat 295  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||| | || ||||||||||||||| ||||||||    
T  32297 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtaataagtattaatatacttccagggcat 32373  T

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