View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0763_low_14 (Length: 317)
Name: NF0763_low_14
Description: NF0763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0763_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 31955443 - 31955688
Alignment:
| Q |
1 |
ctaaatctttcgatacatctccaattgatctaatatgtgcagaagctattattgcttgatataggtgtctattacctcattcttgcatctacaaaccata |
100 |
Q |
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| T |
31955443 |
ctaaatctttcgatacatctccaaatgatctaatatgtgcagaagctattattgcttgatataggtgtctattacctcattcttgcatctacaaaccata |
31955542 |
T |
|
| Q |
101 |
tactttgagttatcagaacctggtttcgtaataataatggagtattcc---------------aacaggagctaatcttttatagtatcaaatcttcgtg |
185 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31955543 |
tactttgagttataagaacctggtttcgtaataataatggagtattcctcgatatatgtccataacaggagctaatcttttatagtatcaaatcttcgtg |
31955642 |
T |
|
| Q |
186 |
cccaactacttttggctaaagaaggagctaaccacatgatgatgtc |
231 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31955643 |
cccaactacttttggctgaagaaggagctaaccacatgatgatgtc |
31955688 |
T |
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