View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0764_high_6 (Length: 229)
Name: NF0764_high_6
Description: NF0764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0764_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 54592547 - 54592667
Alignment:
| Q |
12 |
aaataacctccaagtaagttgatctttataaatataagtttcaccttaatattaaaaagatctatggttatgttgtatattaattcagataactagagaa |
111 |
Q |
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| T |
54592547 |
aaataacctccaagtaagttgatctttataaatataagtttcaccttaatattaaaaagatctatggttatgttgtatattaattcagataactagagaa |
54592646 |
T |
|
| Q |
112 |
agtcacatcccatgaatttcc |
132 |
Q |
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||||||||||||||||||||| |
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| T |
54592647 |
agtcacatcccatgaatttcc |
54592667 |
T |
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