View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0764_low_14 (Length: 315)

Name: NF0764_low_14
Description: NF0764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0764_low_14
NF0764_low_14
[»] chr6 (24 HSPs)
chr6 (48-281)||(27851111-27851344)
chr6 (50-281)||(25956569-25956799)
chr6 (48-196)||(20734157-20734304)
chr6 (48-171)||(2201139-2201261)
chr6 (48-171)||(22420987-22421109)
chr6 (168-281)||(19399814-19399928)
chr6 (198-281)||(31630622-31630705)
chr6 (48-142)||(34296979-34297072)
chr6 (59-118)||(19399830-19399889)
chr6 (197-281)||(20734158-20734243)
chr6 (197-281)||(22421023-22421108)
chr6 (197-281)||(34296980-34297065)
chr6 (197-281)||(2201175-2201260)
chr6 (207-281)||(18927880-18927954)
chr6 (59-118)||(18927896-18927954)
chr6 (50-110)||(31630622-31630681)
chr6 (32-67)||(27851338-27851373)
chr6 (227-281)||(28708678-28708732)
chr6 (180-214)||(16624503-16624537)
chr6 (180-214)||(31477709-31477743)
chr6 (236-281)||(18708704-18708749)
chr6 (236-281)||(23151069-23151114)
chr6 (236-281)||(27322221-27322266)
chr6 (165-213)||(27325487-27325535)
[»] scaffold0116 (2 HSPs)
scaffold0116 (50-281)||(43732-43962)
scaffold0116 (50-236)||(47652-47837)
[»] chr1 (24 HSPs)
chr1 (50-281)||(28194397-28194627)
chr1 (50-281)||(43697316-43697546)
chr1 (48-196)||(51274298-51274445)
chr1 (35-130)||(51326904-51326998)
chr1 (195-281)||(43543053-43543139)
chr1 (48-161)||(12328565-12328677)
chr1 (48-119)||(8885468-8885539)
chr1 (100-213)||(20636849-20636961)
chr1 (100-213)||(49261340-49261452)
chr1 (198-281)||(46382652-46382733)
chr1 (128-277)||(35981723-35981862)
chr1 (197-263)||(51274299-51274366)
chr1 (197-263)||(8885471-8885538)
chr1 (197-281)||(12328566-12328651)
chr1 (49-118)||(43543069-43543137)
chr1 (227-269)||(48301079-48301121)
chr1 (180-214)||(1925028-1925062)
chr1 (180-214)||(20924042-20924076)
chr1 (180-214)||(39244040-39244074)
chr1 (180-214)||(39247595-39247629)
chr1 (180-214)||(41388145-41388179)
chr1 (80-118)||(48301083-48301121)
chr1 (50-118)||(46382652-46382717)
chr1 (207-263)||(51326917-51326974)
[»] chr4 (30 HSPs)
chr4 (50-278)||(13844485-13844712)
chr4 (59-281)||(46642777-46642997)
chr4 (49-196)||(33186097-33186243)
chr4 (48-154)||(15880734-15880839)
chr4 (195-281)||(52873249-52873335)
chr4 (168-281)||(15868765-15868877)
chr4 (198-281)||(362189-362272)
chr4 (168-281)||(630830-630942)
chr4 (100-277)||(15099295-15099461)
chr4 (197-281)||(33186158-33186243)
chr4 (168-240)||(13812865-13812936)
chr4 (168-256)||(22634269-22634355)
chr4 (197-281)||(15880753-15880838)
chr4 (49-118)||(52873251-52873319)
chr4 (50-110)||(362213-362272)
chr4 (207-281)||(9923353-9923427)
chr4 (59-118)||(9923369-9923427)
chr4 (207-281)||(11479432-11479506)
chr4 (59-118)||(11479432-11479490)
chr4 (207-281)||(35812211-35812285)
chr4 (207-281)||(32851329-32851402)
chr4 (168-229)||(20157349-20157409)
chr4 (59-98)||(14185252-14185291)
chr4 (59-118)||(35812211-35812269)
chr4 (100-169)||(15190360-15190428)
chr4 (180-214)||(10713026-10713060)
chr4 (180-214)||(10926796-10926830)
chr4 (180-214)||(12487884-12487918)
chr4 (216-249)||(14185248-14185281)
chr4 (236-281)||(19609528-19609573)
[»] chr5 (27 HSPs)
chr5 (50-281)||(5889124-5889353)
chr5 (49-196)||(12122232-12122378)
chr5 (59-196)||(21555100-21555236)
chr5 (59-196)||(21557766-21557902)
chr5 (184-281)||(29915154-29915251)
chr5 (48-174)||(24212385-24212510)
chr5 (168-281)||(21871627-21871739)
chr5 (168-281)||(21875907-21876019)
chr5 (48-148)||(35852666-35852765)
chr5 (48-142)||(36460219-36460312)
chr5 (59-195)||(31455073-31455211)
chr5 (59-195)||(31455686-31455824)
chr5 (62-188)||(30615759-30615883)
chr5 (197-281)||(12122232-12122317)
chr5 (119-277)||(21741559-21741707)
chr5 (197-281)||(24212424-24212509)
chr5 (197-281)||(36460226-36460311)
chr5 (78-190)||(17875215-17875326)
chr5 (197-263)||(35852697-35852764)
chr5 (201-281)||(21557760-21557841)
chr5 (59-118)||(29915177-29915235)
chr5 (201-263)||(31455767-31455830)
chr5 (201-263)||(31455154-31455217)
chr5 (200-281)||(30615812-30615893)
chr5 (201-281)||(21555094-21555175)
chr5 (183-240)||(24767408-24767463)
chr5 (180-214)||(10753537-10753571)
[»] scaffold0009 (2 HSPs)
scaffold0009 (120-281)||(85191-85352)
scaffold0009 (49-118)||(85207-85275)
[»] chr3 (44 HSPs)
chr3 (120-281)||(18439864-18440025)
chr3 (160-281)||(20630154-20630275)
chr3 (59-196)||(31415399-31415535)
chr3 (75-281)||(12269513-12269718)
chr3 (59-196)||(31224675-31224811)
chr3 (48-196)||(15447710-15447854)
chr3 (48-157)||(11912955-11913063)
chr3 (168-281)||(49969934-49970048)
chr3 (48-153)||(6808175-6808279)
chr3 (168-281)||(23413306-23413417)
chr3 (180-281)||(12852436-12852537)
chr3 (49-118)||(49969963-49970032)
chr3 (100-277)||(1465419-1465585)
chr3 (199-281)||(31415460-31415543)
chr3 (197-263)||(6808211-6808278)
chr3 (197-263)||(11912995-11913062)
chr3 (201-281)||(31224669-31224750)
chr3 (168-281)||(45797121-45797231)
chr3 (198-281)||(1988944-1989028)
chr3 (168-240)||(14665600-14665670)
chr3 (197-263)||(15447711-15447778)
chr3 (227-281)||(5841985-5842039)
chr3 (69-118)||(20630210-20630259)
chr3 (168-256)||(14668740-14668825)
chr3 (59-118)||(1988953-1989012)
chr3 (119-202)||(49389657-49389740)
chr3 (227-269)||(40812054-40812096)
chr3 (59-146)||(49389772-49389859)
chr3 (49-118)||(18439941-18440009)
chr3 (224-263)||(30175305-30175344)
chr3 (180-214)||(4107296-4107330)
chr3 (180-214)||(4111148-4111182)
chr3 (207-281)||(14501077-14501150)
chr3 (180-214)||(15965145-15965179)
chr3 (180-214)||(15969069-15969103)
chr3 (180-214)||(15972993-15973027)
chr3 (180-214)||(16750487-16750521)
chr3 (180-214)||(19775941-19775975)
chr3 (76-118)||(30175304-30175346)
chr3 (180-214)||(37439535-37439569)
chr3 (80-118)||(40812058-40812096)
chr3 (49-118)||(12269529-12269597)
chr3 (236-281)||(17538311-17538356)
chr3 (236-281)||(40807200-40807245)
[»] chr7 (34 HSPs)
chr7 (120-281)||(17232564-17232725)
chr7 (120-281)||(8468370-8468524)
chr7 (59-196)||(30820977-30821113)
chr7 (59-196)||(38480232-38480368)
chr7 (48-171)||(9320439-9320561)
chr7 (59-196)||(36685971-36686107)
chr7 (48-171)||(11092757-11092879)
chr7 (48-154)||(11085036-11085141)
chr7 (195-281)||(14270136-14270222)
chr7 (198-281)||(45847735-45847818)
chr7 (48-146)||(15213744-15213841)
chr7 (180-281)||(18302111-18302211)
chr7 (100-277)||(9389705-9389871)
chr7 (50-154)||(15439322-15439425)
chr7 (197-281)||(11092793-11092878)
chr7 (199-281)||(38480293-38480376)
chr7 (201-281)||(36685965-36686046)
chr7 (168-240)||(39267746-39267817)
chr7 (49-118)||(8468386-8468454)
chr7 (197-281)||(9320440-9320525)
chr7 (197-281)||(11085055-11085140)
chr7 (49-118)||(14270138-14270206)
chr7 (197-281)||(15213755-15213840)
chr7 (201-281)||(30820971-30821052)
chr7 (50-118)||(45847735-45847802)
chr7 (183-256)||(9751618-9751689)
chr7 (49-110)||(17232588-17232648)
chr7 (201-281)||(37727642-37727723)
chr7 (227-281)||(11391920-11391974)
chr7 (168-229)||(2832331-2832391)
chr7 (59-118)||(37727648-37727707)
chr7 (180-214)||(45169905-45169939)
chr7 (236-281)||(12371482-12371527)
chr7 (236-281)||(13148275-13148320)
[»] chr8 (29 HSPs)
chr8 (35-196)||(41680819-41680979)
chr8 (49-196)||(21579917-21580063)
chr8 (45-171)||(32807285-32807410)
chr8 (49-196)||(29763579-29763724)
chr8 (198-281)||(27472391-27472474)
chr8 (198-281)||(38550086-38550169)
chr8 (195-281)||(1327117-1327203)
chr8 (48-146)||(42560237-42560334)
chr8 (50-176)||(39833887-39834013)
chr8 (197-281)||(29763579-29763664)
chr8 (197-263)||(21579917-21579984)
chr8 (216-281)||(18760591-18760656)
chr8 (61-110)||(18760615-18760664)
chr8 (197-281)||(42560238-42560323)
chr8 (50-118)||(27472391-27472458)
chr8 (50-118)||(38550086-38550153)
chr8 (49-118)||(1327119-1327187)
chr8 (225-281)||(20982747-20982803)
chr8 (207-281)||(32807321-32807396)
chr8 (198-236)||(20982706-20982744)
chr8 (197-281)||(41680833-41680918)
chr8 (59-118)||(3273212-3273270)
chr8 (180-214)||(18862544-18862578)
chr8 (180-214)||(21383830-21383864)
chr8 (180-214)||(21411123-21411157)
chr8 (180-214)||(21805615-21805649)
chr8 (180-214)||(21827913-21827947)
chr8 (236-281)||(19139969-19140014)
chr8 (236-281)||(39936813-39936858)
[»] scaffold1351 (2 HSPs)
scaffold1351 (48-196)||(1561-1708)
scaffold1351 (197-263)||(1640-1707)
[»] scaffold0737 (2 HSPs)
scaffold0737 (49-196)||(6389-6535)
scaffold0737 (197-281)||(6389-6474)
[»] scaffold0071 (2 HSPs)
scaffold0071 (48-196)||(14335-14482)
scaffold0071 (197-263)||(14414-14481)
[»] chr2 (21 HSPs)
chr2 (48-196)||(24865480-24865627)
chr2 (48-196)||(22500984-22501131)
chr2 (48-196)||(22508918-22509065)
chr2 (48-196)||(7672268-7672409)
chr2 (48-119)||(2524439-2524510)
chr2 (197-263)||(24865481-24865548)
chr2 (197-262)||(7672269-7672335)
chr2 (207-281)||(6576430-6576505)
chr2 (59-118)||(6576446-6576505)
chr2 (197-263)||(22501063-22501130)
chr2 (197-263)||(22508997-22509064)
chr2 (59-118)||(24436263-24436321)
chr2 (225-281)||(24883657-24883713)
chr2 (197-263)||(2524440-2524507)
chr2 (78-146)||(22501128-22501195)
chr2 (78-146)||(22509062-22509129)
chr2 (170-214)||(1283562-1283606)
chr2 (78-118)||(24883673-24883713)
chr2 (207-269)||(24436259-24436321)
chr2 (180-214)||(1283600-1283634)
chr2 (180-214)||(30344890-30344924)
[»] scaffold0815 (1 HSPs)
scaffold0815 (63-196)||(479-611)
[»] scaffold0599 (4 HSPs)
scaffold0599 (48-157)||(4649-4757)
scaffold0599 (48-157)||(231-339)
scaffold0599 (197-263)||(271-338)
scaffold0599 (197-263)||(4689-4756)
[»] scaffold0395 (2 HSPs)
scaffold0395 (60-196)||(10890-11025)
scaffold0395 (197-257)||(10975-11036)
[»] scaffold0075 (1 HSPs)
scaffold0075 (168-281)||(8350-8462)
[»] scaffold0100 (2 HSPs)
scaffold0100 (195-281)||(36140-36226)
scaffold0100 (49-118)||(36142-36210)
[»] scaffold0810 (2 HSPs)
scaffold0810 (206-281)||(2988-3063)
scaffold0810 (59-118)||(3004-3062)
[»] scaffold0513 (2 HSPs)
scaffold0513 (195-281)||(10961-11047)
scaffold0513 (49-118)||(10963-11031)
[»] scaffold0004 (2 HSPs)
scaffold0004 (196-281)||(362948-363033)
scaffold0004 (49-118)||(362964-363032)
[»] scaffold0124 (1 HSPs)
scaffold0124 (180-281)||(24722-24822)
[»] scaffold0434 (2 HSPs)
scaffold0434 (46-118)||(6767-6839)
scaffold0434 (197-281)||(6770-6855)
[»] scaffold0142 (1 HSPs)
scaffold0142 (180-281)||(7716-7817)
[»] scaffold1137 (1 HSPs)
scaffold1137 (100-213)||(2300-2412)
[»] scaffold0061 (4 HSPs)
scaffold0061 (50-110)||(15439-15499)
scaffold0061 (50-110)||(24497-24557)
scaffold0061 (198-261)||(15439-15503)
scaffold0061 (198-261)||(24497-24561)
[»] scaffold0192 (1 HSPs)
scaffold0192 (183-242)||(9851-9909)
[»] scaffold0261 (1 HSPs)
scaffold0261 (168-281)||(18393-18504)
[»] scaffold0080 (3 HSPs)
scaffold0080 (59-119)||(59327-59386)
scaffold0080 (207-281)||(59327-59401)
scaffold0080 (180-214)||(49053-49087)
[»] scaffold0221 (1 HSPs)
scaffold0221 (168-229)||(12864-12924)
[»] scaffold0001 (2 HSPs)
scaffold0001 (59-118)||(76962-77019)
scaffold0001 (227-281)||(76946-77000)
[»] scaffold0802 (2 HSPs)
scaffold0802 (59-118)||(5478-5536)
scaffold0802 (207-281)||(5478-5552)
[»] scaffold0335 (2 HSPs)
scaffold0335 (207-281)||(861-935)
scaffold0335 (59-118)||(877-935)
[»] scaffold0679 (1 HSPs)
scaffold0679 (227-281)||(2471-2525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (207-281)||(13517-13590)
[»] scaffold0166 (1 HSPs)
scaffold0166 (183-240)||(9905-9960)
[»] scaffold0371 (2 HSPs)
scaffold0371 (207-281)||(3120-3194)
scaffold0371 (59-118)||(3136-3194)
[»] scaffold0415 (1 HSPs)
scaffold0415 (180-214)||(570-604)
[»] scaffold0229 (1 HSPs)
scaffold0229 (180-214)||(11400-11434)
[»] scaffold0157 (1 HSPs)
scaffold0157 (180-214)||(32559-32593)
[»] scaffold0141 (1 HSPs)
scaffold0141 (180-214)||(13986-14020)
[»] scaffold0031 (1 HSPs)
scaffold0031 (180-214)||(35985-36019)
[»] scaffold0012 (1 HSPs)
scaffold0012 (180-214)||(189276-189310)
[»] scaffold0384 (1 HSPs)
scaffold0384 (236-281)||(8189-8234)
[»] scaffold0134 (1 HSPs)
scaffold0134 (236-281)||(10029-10074)
[»] scaffold1052 (1 HSPs)
scaffold1052 (192-240)||(3104-3150)
[»] scaffold0375 (1 HSPs)
scaffold0375 (237-281)||(9106-9150)


Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 48 - 281
Target Start/End: Complemental strand, 27851344 - 27851111
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27851344 gatgatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaagattattattgatgg 27851245  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatg 247  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27851244 ttacttgttgtgtatgtttaaatgatgttgtcttgttgttgtgctgaatatgatttactttgatgcttaatgtgagaatatttatatattgtgaaagatg 27851145  T
Q  248 ctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||||||||||||||    
T  27851144 ctgatatgaagttgtattggttgtatttgatgat 27851111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 50 - 281
Target Start/End: Original strand, 25956569 - 25956799
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| | ||| || | |||||||||||| ||||||||||||||||    
T  25956569 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaat-gttatatatgaagattattattgatggtt 25956667  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||| ||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25956668 acttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 25956767  T
Q  250 gatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||| |||||||||||||||||    
T  25956768 gatatgaagttgtaatggttgtatttgatgat 25956799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 20734157 - 20734304
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  20734157 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatgg 20734255  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||| ||  |||||||||||| || ||||||| ||||||| |||||    
T  20734256 tgacttgctgcatatgtttaaatggtgttgtcttgctgttgtgatgaat 20734304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 2201261 - 2201139
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  2201261 gatgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatgg 2201163  T
Q  148 ttacttgatgtgtatgtttaaatg 171  Q
    | ||||| ||  ||||| ||||||    
T  2201162 tgacttgctgcatatgtctaaatg 2201139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 22421109 - 22420987
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||| |    
T  22421109 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatag 22421011  T
Q  148 ttacttgatgtgtatgtttaaatg 171  Q
    | ||||| ||  ||||| ||||||    
T  22421010 tgacttgttgcatatgtctaaatg 22420987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 19399928 - 19399814
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattg 266  Q
    ||||||| ||||||  ||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||    
T  19399928 aatgatgttgtcttactgttgtgatgaatatggtttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 19399829  T
Q  267 gttgtatttgatgat 281  Q
    ||| |||||||||||    
T  19399828 gttatatttgatgat 19399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 31630622 - 31630705
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| ||||||    
T  31630622 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgat 31630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 34296979 - 34297072
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattatt 142  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  34296979 gatgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattatt 34297072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 19399889 - 19399830
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19399889 ttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaat 19399830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 20734158 - 20734243
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  20734158 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 20734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 22421108 - 22421023
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  22421108 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 22421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 34296980 - 34297065
Alignment:
Q  197 atgatttactttgatgatta-atgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  34296980 atgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 34297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 2201260 - 2201175
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  2201260 atgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 2201175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 18927954 - 18927880
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  18927954 ttgatgattaaatgtga-aagatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 18927954 - 18927896
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaat 18927896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 31630622 - 31630681
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 110  Q
    |||||||  ||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  31630622 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaa 31630681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 27851373 - 27851338
Alignment:
Q  32 cagagaggatgaataagatgatttatattgatgatt 67  Q
    ||||||||||||||||||||||||||||||||||||    
T  27851373 cagagaggatgaataagatgatttatattgatgatt 27851338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 28708732 - 28708678
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||| |||| ||||||    
T  28708732 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 28708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 16624537 - 16624503
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  16624537 ttgttgttgtgatgaatatgatttactttgatgat 16624503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 31477709 - 31477743
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  31477709 ttgttgttgtgatgaatatgatttactttgatgat 31477743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 18708749 - 18708704
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  18708749 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 23151069 - 23151114
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  23151069 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 23151114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 27322221 - 27322266
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  27322221 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 27322266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 27325487 - 27325535
Alignment:
Q  165 ttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatga 213  Q
    |||||||||| | | ||||||||||| | ||||||||||||||||||||    
T  27325487 ttaaatgatgctattttgttgttgtgataaatatgatttactttgatga 27325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 50 - 281
Target Start/End: Original strand, 43732 - 43962
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| | ||| || | |||||||||||| ||||||||||||||||    
T  43732 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaat-gttatatatgaagattattattgatggtt 43830  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||| ||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43831 acttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 43930  T
Q  250 gatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||| |||||||||||||||||    
T  43931 gatatgaagttgtaatggttgtatttgatgat 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 50 - 236
Target Start/End: Original strand, 47652 - 47837
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| | ||| || | |||||||||||| ||||||||||||||||    
T  47652 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaaat-gttatatatgaagattattattgatggtt 47750  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatat 236  Q
    ||||| ||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47751 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaatgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 281
Target Start/End: Original strand, 28194397 - 28194627
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| | ||| || | |||||||||||| ||||||||||||||||    
T  28194397 tgatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaaat-gttatatatgaagattattattgatggtt 28194495  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||| ||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28194496 acttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgtt 28194595  T
Q  250 gatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||| |||||||||||||||||    
T  28194596 gatatgaagttgtaatggttgtatttgatgat 28194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 50 - 281
Target Start/End: Complemental strand, 43697546 - 43697316
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| | ||| || | |||||||||||| |||||||||| |||||    
T  43697546 tgatttaagttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaaat-gttatatatgaagattattattgttggtt 43697448  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||| ||| |||||||| |||||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  43697447 acttgctgtatatgtttatatgatgctgtcttgctgttgtgataaatatgatttactttgatgattaatgtgagattattgatatattgtgaaagatgct 43697348  T
Q  250 gatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||| ||||| |||||||||||    
T  43697347 gatatgaagttgtaatggttttatttgatgat 43697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 51274298 - 51274445
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||  ||||||||||||||    
T  51274298 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaa-ttgttatataagatgattattattgatgg 51274396  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||||||  |||||||||||| |  ||| ||||||||||| |||||    
T  51274397 tgacttgatgcatatgtttaaatgtttttgttttgttgttgtgatgaat 51274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 51326998 - 51326904
Alignment:
Q  35 agaggatgaataagatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatg 130  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  51326998 agaggatgaataagatgattaatattgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaa-ttgttatatatg 51326904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 43543139 - 43543053
Alignment:
Q  195 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  43543139 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatgattgtattagatgat 43543053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 12328565 - 12328677
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||  ||||||||||||||    
T  12328565 gatgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaa-ttgttatatatgatgattattattgatgg 12328663  T
Q  148 ttacttgatgtgta 161  Q
    | ||||| ||||||    
T  12328664 tgacttgctgtgta 12328677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 8885539 - 8885468
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatt 119  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8885539 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatt 8885468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 20636961 - 20636849
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatg 199  Q
    ||||| ||||| |||||||| |||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| ||||||||    
T  20636961 gttgacatgaagttgtaatt-gttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatg 20636863  T
Q  200 atttactttgatga 213  Q
    |||| |||||||||    
T  20636862 attttctttgatga 20636849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 49261452 - 49261340
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatg 199  Q
    ||||||||||| |||||||| |||||| ||||| ||||||||||||||||||||| | | ||||||||||||||  ||||||| ||| ||| ||||||||    
T  49261452 gttgatatgaagttgtaatt-gttatacatgaagattattattgatggttacttgttatatatgtttaaatgatactgtcttgctgtcgtgatgaatatg 49261354  T
Q  200 atttactttgatga 213  Q
    ||||||||||||||    
T  49261353 atttactttgatga 49261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 46382652 - 46382733
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  46382652 tgatttactttgatgattaatgtgagaatatt--tatattgtgaaagatgttgatatgaagttgtaatggttttattagatgat 46382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 35981723 - 35981862
Alignment:
Q  128 atgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaata 227  Q
    ||||| |||| || ||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| ||||||||||| ||||||||           |||||    
T  35981723 atgaagattactaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattgactttgat-----------gaata 35981811  T
Q  228 tttatat-attgtgaaagatgctgatatgaagttgtattggttgtatttga 277  Q
    ||||||| ||||||||||||||| ||||||||| ||| |||||||||||||    
T  35981812 tttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttga 35981862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 51274299 - 51274366
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  51274299 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgta 51274366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 8885538 - 8885471
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| |||||    
T  8885538 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgta 8885471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 12328566 - 12328651
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||| | |||||||||| |||| | ||| ||| |||||||    
T  12328566 atgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgat 12328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 43543137 - 43543069
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  43543137 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 48301121 - 48301079
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggtt 269  Q
    ||||||||||||||||||||| ||||||||||||||| |||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggtt 48301079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 1925028 - 1925062
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  1925028 ttgttgttgtgatgaatatgatttactttgatgat 1925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 20924042 - 20924076
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  20924042 ttgttgttgtgatgaatatgatttactttgatgat 20924076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 39244040 - 39244074
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  39244040 ttgttgttgtgatgaatatgatttactttgatgat 39244074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 39247595 - 39247629
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  39247595 ttgttgttgtgatgaatatgatttactttgatgat 39247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 41388145 - 41388179
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  41388145 ttgttgttgtgatgaatatgatttactttgatgat 41388179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 48301121 - 48301083
Alignment:
Q  80 atttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaat 48301083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 46382652 - 46382717
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||  ||||||||||| ||||| ||||||||||  |||||||||| ||||||||||| |||||||    
T  46382652 tgatttactttgatgattaa-tgtgagaatatttata--ttgtgaaagatgttgatatgaagttgtaat 46382717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 51326974 - 51326917
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||| |||||  ||||||||||||| ||||||| | |||||||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgta 51326917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 50 - 278
Target Start/End: Complemental strand, 13844712 - 13844485
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  ||||||||||||||||||||||| |||||| ||||||||  ||||||||| | ||| || | |||||||||||| ||||||||||||||||    
T  13844712 tgatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaaat-gttatatatgaagattattattgatggtt 13844614  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||| ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13844613 acttgttgtatatgtttaaatgatgttgtcttactgttgtgatgaatatgatttactttgattattaatgtgagaatatttatatattgtgaaagatgct 13844514  T
Q  250 gatatgaagttgtattggttgtatttgat 278  Q
    |||||||||||||| ||||||||||||||    
T  13844513 gatatgaagttgtaatggttgtatttgat 13844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 281
Target Start/End: Complemental strand, 46642997 - 46642777
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    ||||||||||| || ||||| ||||||||||||||||||  ||| ||||||| |||||||| |||| ||||||| | |||||||| |||||||||| |||    
T  46642997 ttgatgattaa-tgcgaaaagatttatatattgtgaaagttgttaatatgaagttgtaatt-gttacatatgaagaatattattggtggttacttgttgt 46642900  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaag 258  Q
     ||||||||||||||| || |||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||| | ||||||||| | ||||||||||    
T  46642899 atatgtttaaatgatgctgccttgctgttgtgatgaatatgatttaatttgatgattaatgtgagaagatttataaactgtgaaagacgttgatatgaag 46642800  T
Q  259 ttgtattggttgtatttgatgat 281  Q
    ||||| ||||| |||||||||||    
T  46642799 ttgtaatggttatatttgatgat 46642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 196
Target Start/End: Complemental strand, 33186243 - 33186097
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggt 148  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  33186243 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatggt 33186145  T
Q  149 tacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||| ||  | ||||||||||||||||||||||||||||| |||||    
T  33186144 gacttgctgcatttgtttaaatgatgatgtcttgttgttgtgatgaat 33186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 15880839 - 15880734
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  15880839 gatgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatgg 15880741  T
Q  148 ttacttg 154  Q
    | |||||    
T  15880740 tgacttg 15880734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 52873249 - 52873335
Alignment:
Q  195 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  52873249 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 52873335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 15868765 - 15868877
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||| ||     
T  15868765 aatgatgttgttttgttgttgtgatgaatatgatttactttgatgattaatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatga 15868863  T
Q  268 ttgtatttgatgat 281  Q
    || ||| |||||||    
T  15868864 ttatatctgatgat 15868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 362272 - 362189
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| ||||||    
T  362272 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgat 362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 630830 - 630942
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| |||  |||||||||| ||||||  |||||||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||| ||     
T  630830 aatgatgttgttctgttgttgtgatgaatacaatttactttgatgattaatgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatga 630928  T
Q  268 ttgtatttgatgat 281  Q
    ||||||||||||||    
T  630929 ttgtatttgatgat 630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 277
Target Start/End: Complemental strand, 15099461 - 15099295
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatg 199  Q
    ||||||||||| ||| |||| |||||| || || ||||||| ||||||||||||| ||| |||||||||| |||| ||||||| ||| ||  ||||||||    
T  15099461 gttgatatgaagttgaaatt-gttatacataaagattattaatgatggttacttgctgtatatgtttaaaagatgttgtcttgctgtcgtaatgaatatg 15099363  T
Q  200 atttactttgatgattaatgtgagaatatttatat-attgtgaaagatgctgatatgaagttgtattggttgtatttga 277  Q
    ||| ||||||||           |||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||    
T  15099362 attgactttgat-----------gaatatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttga 15099295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 33186243 - 33186158
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| | ||||||||||||||| | ||| ||| |||||||    
T  33186243 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgat 33186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 13812865 - 13812936
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtg 240  Q
    ||||||| ||| ||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  13812865 aatgatgttgttttgttgttgtgatgaatatgatttacttagatgattaatgagagaata-ttatatattgtg 13812936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 22634269 - 22634355
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatga 256  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||| | |||| ||||||||    
T  22634269 aatgatgctgttttgttgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtggatgatgatgatatga 22634355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 15880838 - 15880753
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  15880838 atgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 15880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 52873251 - 52873319
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  52873251 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 52873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 362272 - 362213
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 110  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  362272 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaa 362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 9923427 - 9923353
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  9923427 ttgatgattaaatgtga-aagatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9923353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 9923427 - 9923369
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaat 9923369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 11479432 - 11479506
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  11479432 ttgatgattaaatgtga-aagatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 11479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 11479432 - 11479490
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaat 11479490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 35812211 - 35812285
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  35812211 ttgatgattaaatgtg-gaagatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 35812285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 32851402 - 32851329
Alignment:
Q  207 ttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||| ||||||||| | |||||||||| |||| ||||||||||||||| ||  |||||||||||||    
T  32851402 ttgatgattaatgagagaatatt-acatattgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgat 32851329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 20157349 - 20157409
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatt 229  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  20157349 aatgatgctgttttgttgttgtgatgaatatgatttac-ttgatgattaatgagagaatatt 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 14185291 - 14185252
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaaga 98  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  14185291 ttgatggttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 35812211 - 35812269
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||| ||  ||||||||||||||||||| ||||||||||| |||||||    
T  35812211 ttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaat 35812269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 15190428 - 15190360
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaa 169  Q
    ||||||||||| ||| |||| |||||| ||||| ||||||| ||||||||||||| ||| ||||||||||    
T  15190428 gttgatatgaagttgaaatt-gttatacatgaagattattaatgatggttacttgctgtatatgtttaaa 15190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 10713060 - 10713026
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  10713060 ttgttgttgtgatgaatatgatttactttgatgat 10713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 10926830 - 10926796
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  10926830 ttgttgttgtgatgaatatgatttactttgatgat 10926796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 12487918 - 12487884
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  12487918 ttgttgttgtgatgaatatgatttactttgatgat 12487884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 14185281 - 14185248
Alignment:
Q  216 aatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||||| ||||||||||||||||||||||||||    
T  14185281 aatgtgaaaatatttatatattgtgaaagatgct 14185248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 19609573 - 19609528
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  19609573 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 19609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 50 - 281
Target Start/End: Original strand, 5889124 - 5889353
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| | ||| |||| |||||| ||||| ||||||||||||||||    
T  5889124 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaatt-gttatacatgaagattattattgatggtt 5889222  T
Q  150 acttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 249  Q
    ||||| ||| ||||||||||||||| |||||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5889223 acttgctgtatatgtttaaatgatgttgtcttct-gtcgtgatgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgct 5889321  T
Q  250 gatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||| |||||||||||||||||    
T  5889322 gatatgaagttgtaatggttgtatttgatgat 5889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 12122232 - 12122378
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggt 148  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  12122232 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatggt 12122330  T
Q  149 tacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     |||||  |  ||||||||||||||||||||||| ||||||| |||||    
T  12122331 gacttgcggcatatgtttaaatgatgatgtcttgctgttgtgatgaat 12122378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 21555100 - 21555236
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||  ||||||||||||||| ||||| ||     
T  21555100 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaa-ttgttatatatgatgattattattgatggtgacttgctgc 21555198  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||||||||||||| ||||||| ||||||| |||||    
T  21555199 atatgtttaaatgatgttgtcttgctgttgtgatgaat 21555236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 21557766 - 21557902
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||| || ||||| ||     
T  21557766 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatagtgacttgctgc 21557864  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||||||||||||| ||||||| |||| || |||||    
T  21557865 atatgtttaaatgatgttgtcttgctgttatgatgaat 21557902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 29915154 - 29915251
Alignment:
Q  184 tgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  29915154 tgttgtgatgaatatgatctactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 29915251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 24212510 - 24212385
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||| |||||||||    
T  24212510 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattaatattgatgg 24212412  T
Q  148 ttacttgatgtgtatgtttaaatgatg 174  Q
    | ||||| ||  ||||| |||||||||    
T  24212411 tgacttgctgcatatgtctaaatgatg 24212385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 21871627 - 21871739
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||| ||||||||||||||| ||     
T  21871627 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgattaatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatga 21871725  T
Q  268 ttgtatttgatgat 281  Q
    ||||||||||||||    
T  21871726 ttgtatttgatgat 21871739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 21875907 - 21876019
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||| ||||||||||||||| ||     
T  21875907 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgattaatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatga 21876005  T
Q  268 ttgtatttgatgat 281  Q
    ||||||||||||||    
T  21876006 ttgtatttgatgat 21876019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 35852765 - 35852666
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||    
T  35852765 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatacgatgattattattgatgg 35852667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 36460312 - 36460219
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattatt 142  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  36460312 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattatt 36460219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 31455211 - 31455073
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaa---attattattgatggttacttga 155  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||| | |||||| |||| |   ||||||||||||||| ||||||    
T  31455211 ttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaa-tcgttataaatgatattgattattattgatggtgacttga 31455113  T
Q  156 tgtgtatgtttaaatgatgatgtcttgttgttgtgctgaa 195  Q
    ||  ||||||||||||||| ||||||| ||||||| ||||    
T  31455112 tgcatatgtttaaatgatgttgtcttgctgttgtgatgaa 31455073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 31455824 - 31455686
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaa---attattattgatggttacttga 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| | |||||| |||| |   ||||||||||||||| |||||     
T  31455824 ttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaa-tcgttataaatgatattgattattattgatggtgacttgc 31455726  T
Q  156 tgtgtatgtttaaatgatgatgtcttgttgttgtgctgaa 195  Q
    ||  ||||||||||||||| ||||||| ||||||| ||||    
T  31455725 tgcatatgtttaaatgatgttgtcttgctgttgtgatgaa 31455686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 30615883 - 30615759
Alignment:
Q  62 atgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgta 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||  |||  ||||||| ||||||| ||||| ||  ||    
T  30615883 atgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaa-ttgttataattgatgattattaatgatggtgacttgctgcata 30615786  T
Q  162 tgtttaaatgatgatgtcttgttgttg 188  Q
    |||||||| |||||||||||| |||||    
T  30615785 tgtttaaacgatgatgtcttgctgttg 30615759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 12122232 - 12122317
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  12122232 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 12122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 277
Target Start/End: Original strand, 21741559 - 21741707
Alignment:
Q  119 ttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaat 218  Q
    |||||||| ||||| ||||||| ||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| || |||||||| | ||||||           
T  21741559 ttgttatacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgtatatgattgaatttgat------- 21741651  T
Q  219 gtgagaatatttatat-attgtgaaagatgctgatatgaagttgtattggttgtatttga 277  Q
        |||||||||||| ||||||||||||||| ||||||| | ||| |||||||||||||    
T  21741652 ----gaatatttatataattgtgaaagatgcttatatgaaatcgtaatggttgtatttga 21741707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 24212509 - 24212424
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  24212509 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 24212424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 36460311 - 36460226
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  36460311 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 36460226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 190
Target Start/End: Complemental strand, 17875326 - 17875215
Alignment:
Q  78 atatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatg 177  Q
    ||||||||||| ||  ||||||||||||||||| || ||||| |||||||||||  ||||||||||||||| ||||| ||  ||||||||||||||  |     
T  17875326 atatttatataatgataaagacgttgatatgaagttctaatt-gttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatatta 17875228  T
Q  178 tcttgttgttgtg 190  Q
    ||||| |||||||    
T  17875227 tcttgctgttgtg 17875215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 35852764 - 35852697
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| |||||    
T  35852764 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgta 35852697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 21557760 - 21557841
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 21557841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 29915177 - 29915235
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  29915177 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 29915235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 31455830 - 31455767
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| | | |||||||||||||||    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgta 31455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 31455217 - 31455154
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| | | |||||| ||||||||    
T  31455217 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgta 31455154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 30615893 - 30615812
Alignment:
Q  200 atttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||| |||||||| ||||| |||||| ||||||||||||||| | ||||||||||||||| | ||| || ||||||||    
T  30615893 atttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaattgttataattgatgat 30615812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 21555094 - 21555175
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||| | ||| || |||||||| | ||| ||| |||||||    
T  21555094 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgat 21555175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 24767408 - 24767463
Alignment:
Q  183 ttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtg 240  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  24767408 ttgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 24767463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 10753571 - 10753537
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  10753571 ttgttgttgtgatgaatatgatttactttgatgat 10753537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 85352 - 85191
Alignment:
Q  120 tgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatg 219  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||    
T  85352 tgttatatatgaagattattattgatggttacttgatgtatatgtttaaatgaagttgtcttgctgttgtgatgaatatgatttactttgatgattaatg 85253  T
Q  220 tgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  85252 tgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgat 85191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 85275 - 85207
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  85275 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 85207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 6e-65; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 120 - 281
Target Start/End: Original strand, 18439864 - 18440025
Alignment:
Q  120 tgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatg 219  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  18439864 tgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaatg 18439963  T
Q  220 tgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  18439964 tgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgat 18440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 20630154 - 20630275
Alignment:
Q  160 tatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagt 259  Q
    ||||||||||||||| ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  20630154 tatgtttaaatgatgttgtcttgctgttgtaatgaatatgatttactttgacgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagt 20630253  T
Q  260 tgtattggttgtatttgatgat 281  Q
    |||| |||||||||| ||||||    
T  20630254 tgtaatggttgtattagatgat 20630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 31415535 - 31415399
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||||| ||     
T  31415535 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatggtgacttgctgc 31415437  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||||||||||||| ||||||| ||||||| |||||    
T  31415436 atatgtttaaatgatgttgtcttgctgttgtgatgaat 31415399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 281
Target Start/End: Complemental strand, 12269718 - 12269513
Alignment:
Q  75 aaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatg 174  Q
    |||| ||||||||||||||||||  ||||||||||| ||||| ||| ||| ||||||| | |||||| | |||||||||| ||| |||||||||||||||    
T  12269718 aaaagatttatatattgtgaaagttgttgatatgaagttgtatttt-ttacatatgaagaatattatcggtggttacttgttgtatatgtttaaatgatg 12269620  T
Q  175 atgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatt 274  Q
     || |||| ||||||  |||||||||||||  ||||||||||||||||||| ||||||| ||| |||| || | ||||||||||||||| || || ||||    
T  12269619 ctgccttgctgttgtcatgaatatgatttaagttgatgattaatgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatt 12269520  T
Q  275 tgatgat 281  Q
    |||||||    
T  12269519 tgatgat 12269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 31224675 - 31224811
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||||| ||     
T  31224675 ttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatggtgacttgctgc 31224773  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||||||||||||| ||||||| ||||||| |||||    
T  31224774 atatgtttaaatgatgttgtcttgctgttgtgatgaat 31224811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 15447710 - 15447854
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||   ||||||||||||||    
T  15447710 gatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaa-ttgttatatatg---attattattgatgg 15447805  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||||||  ||||||||||||||| ||||||| ||||||| |||||    
T  15447806 tgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 15447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 11913063 - 11912955
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||     
T  11913063 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgattattattattgatgt 11912965  T
Q  148 ttacttgatg 157  Q
    | ||||||||    
T  11912964 tgacttgatg 11912955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 49969934 - 49970048
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattg 266  Q
    ||||||| ||||||  ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||    
T  49969934 aatgatgttgtcttcctgttgtgatgaatatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 49970033  T
Q  267 gttgtatttgatgat 281  Q
    ||| |||||||||||    
T  49970034 gttatatttgatgat 49970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 6808279 - 6808175
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||    
T  6808279 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatataatgattattattgatgg 6808181  T
Q  148 ttactt 153  Q
    | ||||    
T  6808180 tgactt 6808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 23413306 - 23413417
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| |||  |||||||||| |||||||||||||||| ||||||||||| ||||||||| | |||||||||| |||| ||||||||||||||| ||     
T  23413306 aatgatgctgttctgttgttgtgatgaatatgatttactt-gatgattaatgagagaatatt-acatattgtgaatgatgatgatatgaagttgtaatga 23413403  T
Q  268 ttgtatttgatgat 281  Q
    ||||||||||||||    
T  23413404 ttgtatttgatgat 23413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 12852436 - 12852537
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaag-ttgtattggttgtatttgat 278  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||| | |||| |||||||||| ||||| || |||||||||||    
T  12852436 ttgttgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgatgatgatatgaagtttgtaatgattgtatttgat 12852534  T
Q  279 gat 281  Q
    |||    
T  12852535 gat 12852537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 49969963 - 49970032
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  49969963 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaat 49970032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 277
Target Start/End: Original strand, 1465419 - 1465585
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatg 199  Q
    ||||||||||| ||| |||| |||||| ||||| ||||||| ||||||||||||| | | ||||||||||||||| ||||||| ||  ||| ||||||||    
T  1465419 gttgatatgaagttgaaatt-gttatacatgaagattattaatgatggttacttgctctatatgtttaaatgatgttgtcttgctgccgtgatgaatatg 1465517  T
Q  200 atttactttgatgattaatgtgagaatatttatat-attgtgaaagatgctgatatgaagttgtattggttgtatttga 277  Q
    ||| ||||||||           |||||||||||| ||||||||||||||| ||||||||| ||| |||||| ||||||    
T  1465518 attgactttgat-----------gaatatttatataattgtgaaagatgcttatatgaagtcgtaatggttggatttga 1465585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 31415543 - 31415460
Alignment:
Q  199 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31415460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 6808278 - 6808211
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| |||||    
T  6808278 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgta 6808211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 11913062 - 11912995
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| |||||    
T  11913062 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgta 11912995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 31224669 - 31224750
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31224750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 45797231 - 45797121
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    |||||||||||  |||| ||||| |||||||| || |||| ||||||||||| ||||||||| | |||||||||| |||| ||||||||||||||| ||     
T  45797231 aatgatgatgttctgttattgtgatgaatatggtt-actt-gatgattaatgagagaatatt-acatattgtgaatgatgatgatatgaagttgtaatga 45797135  T
Q  268 ttgtatttgatgat 281  Q
     |||||||||||||    
T  45797134 atgtatttgatgat 45797121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 1988944 - 1989028
Alignment:
Q  198 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||| || ||||||||||| ||||| || || |||||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  1988944 tgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaatggttgtatttgatgat 1989028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 14665670 - 14665600
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtg 240  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  14665670 aatgatgttgttttgttgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 14665600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 15447711 - 15447778
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||| ||||||||| | |||||||||||||||    
T  15447711 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgta 15447778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 5842039 - 5841985
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  5842039 atttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgat 5841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 20630210 - 20630259
Alignment:
Q  69 aatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  20630210 aatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 20630259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 14668825 - 14668740
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatga 256  Q
    ||||||| ||| ||||||||||| ||||||||| |||| ||||||||||||| ||||||| |||||||||||| | |||| ||||||||    
T  14668825 aatgatgctgttttgttgttgtgatgaatatga-ttac-ttgatgattaatgagagaata-ttatatattgtggatgatgatgatatga 14668740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 1988953 - 1989012
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||| || |||||| ||||||||  ||||||||||| |||||||    
T  1988953 ttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaat 1989012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 49389657 - 49389740
Alignment:
Q  119 ttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatt 202  Q
    |||||||| ||||| || |||||| |||| |||||  ||| ||||||||||||||| ||||||| ||| ||| |||||||||||    
T  49389657 ttgttatacatgaagatcattattaatgggtacttattgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgatt 49389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 40812096 - 40812054
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggtt 269  Q
    ||||||||||||||||||||| ||||||||||||||| |||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggtt 40812054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 49389772 - 49389859
Alignment:
Q  59 ttgatgattaaatgtgaaaatattt--atatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatg 146  Q
    |||||||||||||||||||||||||  |||||||||| |||  ||||||||||| |||||| ||||||||| |||  |||||| ||||||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtg-aagttgttgatatgaagttgtaa-ttgttatatttgatgattattgttgatg 49389859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 18439941 - 18440009
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| ||||| |||||||||||||||| | ||||||||| |||||||    
T  18439941 atgatttactttgatgattaa-tgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaat 18440009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 30175305 - 30175344
Alignment:
Q  224 aatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  30175305 aatatttatatactgtgaaagatgttgatatgaagttgta 30175344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 4107296 - 4107330
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  4107296 ttgttgttgtgatgaatatgatttactttgatgat 4107330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 4111148 - 4111182
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  4111148 ttgttgttgtgatgaatatgatttactttgatgat 4111182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 14501150 - 14501077
Alignment:
Q  207 ttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||| ||||||||| | || | ||||| |||| ||||||||||||||| ||  |||||||||||||    
T  14501150 ttgatgattaatgagagaatatt-acatttcgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgat 14501077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 15965179 - 15965145
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  15965179 ttgttgttgtgatgaatatgatttactttgatgat 15965145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 15969103 - 15969069
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  15969103 ttgttgttgtgatgaatatgatttactttgatgat 15969069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 15973027 - 15972993
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  15973027 ttgttgttgtgatgaatatgatttactttgatgat 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 16750487 - 16750521
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  16750487 ttgttgttgtgatgaatatgatttactttgatgat 16750521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 19775975 - 19775941
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  19775975 ttgttgttgtgatgaatatgatttactttgatgat 19775941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 30175304 - 30175346
Alignment:
Q  76 aaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||    
T  30175304 aaatatttatatactgtgaaagatgttgatatgaagttgtaat 30175346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 37439535 - 37439569
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  37439535 ttgttgttgtgatgaatatgatttactttgatgat 37439569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 40812096 - 40812058
Alignment:
Q  80 atttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaat 40812058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 12269597 - 12269529
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| || ||||||| ||| |||| |||||||||||||| |||||||    
T  12269597 atgatttaagttgatgattaa-tgtgagaagatttataaattttgaaggacgttgatatgaagttgtaat 12269529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 17538356 - 17538311
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| |||||||||||||||||| || |||| ||||||    
T  17538356 ttgtgaaagatgttgatatgaagttgtattgattatattggatgat 17538311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 40807245 - 40807200
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  40807245 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 40807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 8e-58; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 17232725 - 17232564
Alignment:
Q  120 tgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatg 219  Q
    ||||| ||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  17232725 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgatgatgtcatgctgttgtgatgaatatgatttactttgatgattaatg 17232626  T
Q  220 tgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||||    
T  17232625 tgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgat 17232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 8468524 - 8468370
Alignment:
Q  120 tgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatg 219  Q
    ||||| ||||||| ||||||| ||||||||||||| ||| ||||||||||||||       || ||||||| ||||||||||||||||||||||||||||    
T  8468524 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgat-------tgctgttgtgatgaatatgatttactttgatgattaatg 8468432  T
Q  220 tgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  8468431 tgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 8468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 30820977 - 30821113
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||||| ||     
T  30820977 ttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatggtaacttgctgc 30821075  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||||||||||||| ||||||||||||||| |||||    
T  30821076 atatgtttaaatgatgttgtcttgttgttgtgatgaat 30821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 38480368 - 38480232
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||||| ||     
T  38480368 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattattgatggtgacttgctgc 38480270  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||| ||||||||||| ||||||| ||||||| |||||    
T  38480269 atatatttaaatgatgttgtcttgctgttgtgatgaat 38480232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 9320439 - 9320561
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  9320439 gatgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatgg 9320537  T
Q  148 ttacttgatgtgtatgtttaaatg 171  Q
    | ||||| ||  ||||| ||||||    
T  9320538 tgacttgttgcatatgtctaaatg 9320561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 36685971 - 36686107
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgt 158  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||  ||||||||||||||| ||||| ||     
T  36685971 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaa-ttgttatatatgatgattattattgatggtgacttgctgc 36686069  T
Q  159 gtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||||||||||||| ||||||| ||||||| |||||    
T  36686070 atatgtttaaatgatgttgtcttgctgttgtgatgaat 36686107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 11092879 - 11092757
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||    
T  11092879 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaa-ttgttatatatgatgattattattgatgg 11092781  T
Q  148 ttacttgatgtgtatgtttaaatg 171  Q
    | ||||| ||  || |||||||||    
T  11092780 tgacttgttgcatacgtttaaatg 11092757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 11085141 - 11085036
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  11085141 gatgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatgg 11085043  T
Q  148 ttacttg 154  Q
    | |||||    
T  11085042 tgacttg 11085036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 14270136 - 14270222
Alignment:
Q  195 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  14270136 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 14270222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 45847735 - 45847818
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  45847735 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 45847818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 15213841 - 15213744
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatg 146  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||    
T  15213841 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaa-ttgttatatatgatgattattattgatg 15213744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 18302211 - 18302111
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatg 279  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||| | || | ||||||||||||||| || ||||||||||||    
T  18302211 ttgttgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgaagatgatatgaagttgtaatgattgtatttgatg 18302113  T
Q  280 at 281  Q
    ||    
T  18302112 at 18302111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 100 - 277
Target Start/End: Original strand, 9389705 - 9389871
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatg 199  Q
    ||||||||||| ||| |||| | |||| ||||| ||||||| ||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| ||||||||    
T  9389705 gttgatatgaagttgaaatt-gatatacatgaagattattaatgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatg 9389803  T
Q  200 atttactttgatgattaatgtgagaatatttatat-attgtgaaagatgctgatatgaagttgtattggttgtatttga 277  Q
    ||| ||||||||           |||| ||||||| ||||||||||||||| ||||||||| ||| |||||||||||||    
T  9389804 attgactttgat-----------gaatctttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttga 9389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 15439425 - 15439322
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || ||||   ||||||||  ||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  15439425 tgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaatt-gttatatatgaagattattattgatggtt 15439327  T
Q  150 acttg 154  Q
    |||||    
T  15439326 acttg 15439322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 11092878 - 11092793
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||| | ||| ||| |||||||    
T  11092878 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgat 11092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 38480376 - 38480293
Alignment:
Q  199 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 38480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 36685965 - 36686046
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| || | ||| ||| |||||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgat 36686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 39267746 - 39267817
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtg 240  Q
    ||||||||||| || |||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  39267746 aatgatgatgttttattgttgtgatgaatatgatttacttagatgattaatgagagaata-ttatatattgtg 39267817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 8468454 - 8468386
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  8468454 atgatttactttgatgattaa-tgtgataatatttatatattgtgaaagatgttgatatgaagttgtaat 8468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 9320440 - 9320525
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||| |||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  9320440 atgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 9320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 11085140 - 11085055
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  11085140 atgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 11085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 14270138 - 14270206
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  14270138 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 14270206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 15213840 - 15213755
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||||||| ||||| | ||| ||| |||||||    
T  15213840 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgat 15213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 30820971 - 30821052
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| | | ||||||||||||||| | ||| ||| |||||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgat 30821052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 45847735 - 45847802
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  45847735 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 45847802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 9751618 - 9751689
Alignment:
Q  183 ttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatga 256  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||| | |||| ||||||||    
T  9751618 ttgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtggatgatgatgatatga 9751689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 17232648 - 17232588
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 110  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  17232648 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaa 17232588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 37727642 - 37727723
Alignment:
Q  201 tttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||| ||||||||||| ||||| || || |||||| |||||||| ||  |||||||||||||| |||||||||||||||||    
T  37727642 tttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgat 37727723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 11391920 - 11391974
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||| |||| ||||||    
T  11391920 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 11391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 2832331 - 2832391
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatt 229  Q
    ||||||| ||| |||||||| || |||||||||||||| ||||||||||||| |||||||||    
T  2832331 aatgatgctgttttgttgttatgatgaatatgatttac-ttgatgattaatgagagaatatt 2832391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 37727648 - 37727707
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||| || |||||| ||||||||  || |||||||| |||||||    
T  37727648 ttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaat 37727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 45169905 - 45169939
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  45169905 ttgttgttgtgatgaatatgatttactttgatgat 45169939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 12371527 - 12371482
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  12371527 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 12371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 13148275 - 13148320
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  13148275 ttgtgaaagatgttgatatgaagttgtaatggttatattagatgat 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 41680819 - 41680979
Alignment:
Q  35 agaggatgaataagatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||  |    
T  41680819 agaggatgaataagatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaa-ttgttatatatgatga 41680917  T
Q  135 ttattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    |||||||||||||| ||||| ||  |||||||||||| |||||||||||||||||| |||||    
T  41680918 ttattattgatggtgacttgctgcatatgtttaaatggtgatgtcttgttgttgtgatgaat 41680979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 21579917 - 21580063
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggt 148  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  21579917 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgataattattattgatggt 21580015  T
Q  149 tacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||| ||  ||||||||||||||| ||||||| ||||||| |||||    
T  21580016 gacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 21580063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 32807410 - 32807285
Alignment:
Q  45 taagatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattga 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  32807410 taagatgattaatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattga 32807312  T
Q  145 tggttacttgatgtgtatgtttaaatg 171  Q
    |||| ||||| ||  ||||| ||||||    
T  32807311 tggtgacttgctgcatatgtctaaatg 32807285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 29763579 - 29763724
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggt 148  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||| ||||||    
T  29763579 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatatatgatgattattatcgatggt 29763677  T
Q  149 tacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     | ||| ||  ||||||||||||||||||||||| ||||||| |||||    
T  29763678 ga-ttgctgcatatgtttaaatgatgatgtcttgctgttgtgatgaat 29763724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 27472391 - 27472474
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  27472391 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 27472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 38550086 - 38550169
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  38550086 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 38550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 1327117 - 1327203
Alignment:
Q  195 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||    
T  1327117 atatgatttactttgatgattaatgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgat 1327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 42560237 - 42560334
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatg 146  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  42560237 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatg 42560334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 39834013 - 39833887
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggtt 149  Q
    |||||||  |||||||||||||||||||| || ||||||  ||||| |  ||||||||||| ||| || | |||||||||||| ||||||||||||||||    
T  39834013 tgatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttgcaaatggttatatatgaagattattattgatggtt 39833914  T
Q  150 acttgatgtgtatgtttaaatgatgat 176  Q
    ||| | ||| |||||||||||||||||    
T  39833913 actcgctgtatatgtttaaatgatgat 39833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 29763579 - 29763664
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| |||||||    
T  29763579 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 29763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 21579917 - 21579984
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||    
T  21579917 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgta 21579984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 18760656 - 18760591
Alignment:
Q  216 aatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||| || ||||||||||||||||||||| |||||||||||| || ||||| |||||||||||    
T  18760656 aatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgat 18760591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 18760664 - 18760615
Alignment:
Q  61 gatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 110  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18760664 gatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaa 18760615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 42560238 - 42560323
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| | | ||||||||| ||||| | ||| ||| |||||||    
T  42560238 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgat 42560323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 27472391 - 27472458
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  27472391 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 27472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 38550086 - 38550153
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  38550086 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 38550153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 1327119 - 1327187
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| ||||||||||||||||||| || ||||||||||| |||||||    
T  1327119 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaat 1327187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 20982747 - 20982803
Alignment:
Q  225 atatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||| |||||||||||||||||  ||||||||||||||| |||||||||| ||||||    
T  20982747 atatatatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgat 20982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 32807396 - 32807321
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 32807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 20982706 - 20982744
Alignment:
Q  198 tgatttactttgatgattaatgtgagaatatttatatat 236  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  20982706 tgatttactttgatgattaatgtgagaatatatatatat 20982744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 41680833 - 41680918
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||||  |||||| || ||||| | ||| ||| |||||||    
T  41680833 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgat 41680918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 3273270 - 3273212
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||||||||||||||||| | |||| |||||| |||||||    
T  3273270 ttgatgattaaatgtgaaag-atttatatattgtgaaaaatgttggtatgaagttgtaat 3273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 18862544 - 18862578
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  18862544 ttgttgttgtgatgaatatgatttactttgatgat 18862578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 21383864 - 21383830
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  21383864 ttgttgttgtgatgaatatgatttactttgatgat 21383830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 21411157 - 21411123
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  21411157 ttgttgttgtgatgaatatgatttactttgatgat 21411123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 21805649 - 21805615
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  21805649 ttgttgttgtgatgaatatgatttactttgatgat 21805615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 21827913 - 21827947
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  21827913 ttgttgttgtgatgaatatgatttactttgatgat 21827947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 19140014 - 19139969
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  19140014 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 19139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 39936813 - 39936858
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  39936813 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 39936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 1708 - 1561
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||  ||||||||||||||    
T  1708 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa-ttgttatataagatgattattattgatgg 1610  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||||||  ||||||||||||||| ||||||||||||||| |||||    
T  1609 tgacttgatgcatatgtttaaatgatgttgtcttgttgttgtgatgaat 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 1707 - 1640
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||    
T  1707 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgta 1640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 6389 - 6535
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggt 148  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  6389 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgatgattattattgatggt 6487  T
Q  149 tacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
     ||||| ||  |||||||||||| || ||||||| | ||||| |||||    
T  6488 gacttgctgcatatgtttaaatggtgttgtcttgctattgtgatgaat 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 6389 - 6474
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| | ||| ||| |||||||    
T  6389 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 6474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 14482 - 14335
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||| ||  ||||||||||||||    
T  14482 gatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaa-ttgttatataagatgattattattgatgg 14384  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||||||  ||||||||||||||| ||||||| ||||||| |||||    
T  14383 tgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 14335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 14481 - 14414
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||| ||||||||| | |||||||||||||||    
T  14481 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgta 14414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 24865480 - 24865627
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||  ||||||||||||||    
T  24865480 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaa-ttgttatataagatgattattattgatgg 24865578  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||||||  ||||||||||||||| ||||||| | ||||| |||||    
T  24865579 tgacttgatgcatatgtttaaatgatgttgtcttgctattgtgatgaat 24865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 22501131 - 22500984
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||  |||| |||||||||    
T  22501131 gatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaa-ttgttatataagatgattaatattgatgg 22501033  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||| ||  ||||||||||||||| ||||||| | ||||| |||||    
T  22501032 taacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaat 22500984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 22509065 - 22508918
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||  |||| |||||||||    
T  22509065 gatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaa-ttgttatataagatgattaatattgatgg 22508967  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||| ||  ||||||||||||||| ||||||| | ||||| |||||    
T  22508966 taacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaat 22508918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 7672268 - 7672409
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||| ||  ||||||||||||||    
T  7672268 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatg-------aagttgttatataagatgattattattgatgg 7672360  T
Q  148 ttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    | ||||||||  || |||||||||||| ||||||| ||||||| |||||    
T  7672361 tgacttgatgcatacgtttaaatgatgctgtcttgctgttgtgatgaat 7672409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 2524439 - 2524510
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatt 119  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2524439 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaatt 2524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 24865481 - 24865548
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  24865481 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgta 24865548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 7672269 - 7672335
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgt 262  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||    
T  7672269 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgt 7672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 6576505 - 6576430
Alignment:
Q  207 ttgatgattaat-gtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||  |||| || ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgat 6576430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 6576505 - 6576446
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaat 6576446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 22501130 - 22501063
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||| | |||||||||||||||    
T  22501130 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgta 22501063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 22509064 - 22508997
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||| | |||||||||||||||    
T  22509064 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgta 22508997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 24436321 - 24436263
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaat 24436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 24883713 - 24883657
Alignment:
Q  225 atatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 24883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 2524440 - 2524507
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||| || |||||    
T  2524440 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgta 2524507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 22501195 - 22501128
Alignment:
Q  78 atatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatg 146  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||  |||| ||||||||    
T  22501195 atatttatataatgtgaaagacgttgatatgaagttgtaa-ttgttatataagatgattaatattgatg 22501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 22509129 - 22509062
Alignment:
Q  78 atatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatg 146  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||  |||| ||||||||    
T  22509129 atatttatataatgtgaaagacgttgatatgaagttgtaa-ttgttatataagatgattaatattgatg 22509062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 1283606 - 1283562
Alignment:
Q  170 tgatgatgtcttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||    
T  1283606 tgatgatattttgttgttgtgatgaatatgatttactttgatgat 1283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 24883713 - 24883673
Alignment:
Q  78 atatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaat 24883673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 24436321 - 24436259
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggtt 269  Q
    ||||||||||| ||||| || ||||||||||||||||||||| ||||||||| ||||| |||||    
T  24436321 ttgatgattaaatgtga-aagatttatatattgtgaaagatgttgatatgaaattgtaatggtt 24436259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 1283634 - 1283600
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  1283634 ttgttgttgtgatgaatatgatttactttgatgat 1283600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 30344890 - 30344924
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  30344890 ttgttgttgtgatgaatatgatttactttgatgat 30344924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 611 - 479
Alignment:
Q  63 tgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtat 162  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||| ||||| ||  |||    
T  611 tgattaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataa-ttgttatatatgatgattattattgatggtgacttgctgcatat 513  T
Q  163 gtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    ||| |||||||| ||||||| ||||||| |||||    
T  512 gttaaaatgatgttgtcttgctgttgtgatgaat 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 4757 - 4649
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||     
T  4757 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgattattattattgatgt 4659  T
Q  148 ttacttgatg 157  Q
    | ||||||||    
T  4658 tgacttgatg 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 339 - 231
Alignment:
Q  48 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatgg 147  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||     
T  339 gatgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa-ttgttatatatgattattattattgatgt 241  T
Q  148 ttacttgatg 157  Q
    | ||||||||    
T  240 tgacttgatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 338 - 271
Alignment:
Q  197 atgatttactttgatgatta-atgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||||| |||||    
T  338 atgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgta 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 4756 - 4689
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgta 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| |||||    
T  4756 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgta 4689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 11025 - 10890
Alignment:
Q  60 tgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||  |||||||||||| || ||||| ||      
T  11025 tgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaa-ttgttatatatgatgattattattgattgtgacttgctgca 10927  T
Q  160 tatgtttaaatgatgatgtcttgttgttgtgctgaat 196  Q
    ||||||||||||||| ||||||| |||| || |||||    
T  10926 tatgtttaaatgatgttgtcttgctgttttgatgaat 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 11036 - 10975
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaa 257  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||| | |||||||||    
T  11036 atgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 10975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 8350 - 8462
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||| ||     
T  8350 aatgatgctgtcttgttgtcgtgatgaatatgatttactttgatgattaatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatga 8448  T
Q  268 ttgtatttgatgat 281  Q
    ||||||||||||||    
T  8449 ttgtatttgatgat 8462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 36140 - 36226
Alignment:
Q  195 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  36140 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgat 36226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 36142 - 36210
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  36142 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 36210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 3063 - 2988
Alignment:
Q  206 tttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3063 tttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 2988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 3062 - 3004
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  3062 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 3004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 10961 - 11047
Alignment:
Q  195 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||    
T  10961 atatgatttactttgatgatttatgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgat 11047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 10963 - 11031
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||| | ||||| |||||||||||||||| ||||| ||||||||||| |||||||    
T  10963 atgatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaat 11031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 363033 - 362948
Alignment:
Q  196 tatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||    
T  363033 tatgatttactttgatgattaatgtgagaatatttatatattttgaaagatgttgatatgaagttgtaatgattgtattagatgat 362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 363032 - 362964
Alignment:
Q  49 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    ||||||||  ||||||||||| ||||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  363032 atgatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 24722 - 24822
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatg 279  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||| | |||| ||||||||||||||| || ||||||||||||    
T  24722 ttgttgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgatgatgatatgaagttgtaatgattgtatttgatg 24820  T
Q  280 at 281  Q
    ||    
T  24821 at 24822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 6767 - 6839
Alignment:
Q  46 aagatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  6767 aagatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaat 6839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 6770 - 6855
Alignment:
Q  197 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||| ||||||| || || |||||||||||    
T  6770 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgat 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 7716 - 7817
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaag-ttgtattggttgtatttgat 278  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||| | |||| |||||||||| ||||| || |||||||||||    
T  7716 ttgttgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgatgatgatatgaagtttgtaatgattgtatttgat 7814  T
Q  279 gat 281  Q
    |||    
T  7815 gat 7817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 2300 - 2412
Alignment:
Q  100 gttgatatgaaattgtaatttgttatatatgaaaattattattgatggttacttgatgtgtatgtttaaatgatgatgtcttgttgttgtgctgaatatg 199  Q
    ||||||||||| ||| |||| ||| || ||||| ||||||| ||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| ||||||||    
T  2300 gttgatatgaagttgaaatt-gttgtacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgctgtcttgctgtcgtgatgaatatg 2398  T
Q  200 atttactttgatga 213  Q
    ||| ||||||||||    
T  2399 attgactttgatga 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 15439 - 15499
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 110  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  15439 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaa 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 24497 - 24557
Alignment:
Q  50 tgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 110  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  24497 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaa 24557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 15439 - 15503
Alignment:
Q  198 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttg 261  Q
    |||||||  ||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||    
T  15439 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttg 15503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 24497 - 24561
Alignment:
Q  198 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttg 261  Q
    |||||||  ||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||    
T  24497 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttg 24561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 9909 - 9851
Alignment:
Q  183 ttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaa 242  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  9909 ttgttgtgatgaatatgatttactttgatgattaatgagagaata-ttatatattgtgaa 9851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 18393 - 18504
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattgg 267  Q
    ||||||| ||| |||||||||||  ||||||| ||||||| ||||||||||| ||| ||||| | | |||||||| |||| ||||||||||||||| ||     
T  18393 aatgatgttgttttgttgttgtgaggaatatggtttactt-gatgattaatgagaggatatt-acacattgtgaatgatgatgatatgaagttgtaatga 18490  T
Q  268 ttgtatttgatgat 281  Q
     |||||||||||||    
T  18491 atgtatttgatgat 18504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 59327 - 59386
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatt 119  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||    
T  59327 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatt 59386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 59327 - 59401
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||| | ||| |||| ||||||    
T  59327 ttgatgattaaatgtga-aagatttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgat 59401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 49053 - 49087
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  49053 ttgttgttgtgatgaatatgatttactttgatgat 49087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 12864 - 12924
Alignment:
Q  168 aatgatgatgtcttgttgttgtgctgaatatgatttactttgatgattaatgtgagaatatt 229  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  12864 aatgatgttgttttgttgttgtgatgaatatgatttac-ttgatgattaatgagagaatatt 12924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 77019 - 76962
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||||  ||||||||||||||||| || |||||||| |||||||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaat 76962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 77000 - 76946
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||||||||||||  |||||||||||||| ||||| |||| ||||||    
T  77000 atttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgat 76946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 5478 - 5536
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||| |||||||    
T  5478 ttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaat 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 5478 - 5552
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || |||||||||||||||||| || ||||||||||||||| || || |||| ||||||    
T  5478 ttgatgattaaatgtga-aagatttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgat 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 935 - 861
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || ||| ||||||||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  935 ttgatgattaaatgtga-aagattaatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 935 - 877
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  ||| ||||||||||||||| ||||||||||| |||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaat 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 2471 - 2525
Alignment:
Q  227 atttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||| |||| ||||||    
T  2471 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 2525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 13590 - 13517
Alignment:
Q  207 ttgatgattaatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||||| ||||||||| | ||| |||||| |||| ||||||||||||||| ||  |||||||||||||    
T  13590 ttgatgattaatgagagaatatt-acatagtgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgat 13517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 9905 - 9960
Alignment:
Q  183 ttgttgtgctgaatatgatttactttgatgattaatgtgagaatatttatatattgtg 240  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  9905 ttgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 3194 - 3120
Alignment:
Q  207 ttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||| || |||||||||| |||||| ||| ||||||||||||||| ||||| |||| ||||||    
T  3194 ttgatgattaaatgtga-aagatttatatatcgtgaaaaatgttgatatgaagttgtaatggttatattggatgat 3120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 3194 - 3136
Alignment:
Q  59 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 118  Q
    |||||||||||||||||||  |||||||||| |||||| | ||||||||||| |||||||    
T  3194 ttgatgattaaatgtgaaag-atttatatatcgtgaaaaatgttgatatgaagttgtaat 3136  T

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Target: scaffold0415 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 604 - 570
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  604 ttgttgttgtgatgaatatgatttactttgatgat 570  T

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Target: scaffold0229 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 11400 - 11434
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  11400 ttgttgttgtgatgaatatgatttactttgatgat 11434  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 32559 - 32593
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  32559 ttgttgttgtgatgaatatgatttactttgatgat 32593  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 13986 - 14020
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  13986 ttgttgttgtgatgaatatgatttactttgatgat 14020  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 35985 - 36019
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  35985 ttgttgttgtgatgaatatgatttactttgatgat 36019  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 189276 - 189310
Alignment:
Q  180 ttgttgttgtgctgaatatgatttactttgatgat 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  189276 ttgttgttgtgatgaatatgatttactttgatgat 189310  T

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Target: scaffold0384 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 8189 - 8234
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  8189 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 8234  T

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Target: scaffold0134 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 10029 - 10074
Alignment:
Q  236 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  10029 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 10074  T

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Target: scaffold1052 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 3150 - 3104
Alignment:
Q  192 tgaatatgatttactttgatgattaatgtgagaatatttatatattgtg 240  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  3150 tgaatatgatttactt-gatgattaatgagagaata-ttatatattgtg 3104  T

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Target: scaffold0375 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 9106 - 9150
Alignment:
Q  237 tgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 281  Q
    ||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  9106 tgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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