View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0765-INSERTION-2 (Length: 570)

Name: NF0765-INSERTION-2
Description: NF0765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0765-INSERTION-2
NF0765-INSERTION-2
[»] chr2 (80 HSPs)
chr2 (133-366)||(43426772-43427010)
chr2 (366-538)||(43427096-43427273)
chr2 (56-134)||(43426546-43426624)
chr2 (395-475)||(3199885-3199965)
chr2 (386-474)||(2427348-2427436)
chr2 (386-466)||(7931527-7931607)
chr2 (388-466)||(13222064-13222142)
chr2 (386-466)||(928569-928647)
chr2 (386-475)||(6972571-6972659)
chr2 (386-466)||(24356107-24356187)
chr2 (386-469)||(31348504-31348587)
chr2 (468-549)||(17695740-17695821)
chr2 (388-475)||(28844046-28844133)
chr2 (386-463)||(7213474-7213551)
chr2 (487-568)||(32022834-32022913)
chr2 (386-466)||(1908525-1908605)
chr2 (386-466)||(2048288-2048368)
chr2 (387-474)||(18460476-18460563)
chr2 (487-550)||(22620268-22620331)
chr2 (386-463)||(9724879-9724954)
chr2 (397-463)||(28572207-28572273)
chr2 (386-475)||(4283050-4283139)
chr2 (397-477)||(18181255-18181335)
chr2 (387-467)||(19515876-19515956)
chr2 (386-477)||(314421-314503)
chr2 (387-466)||(9472418-9472497)
chr2 (387-454)||(39166728-39166795)
chr2 (396-454)||(26273767-26273825)
chr2 (392-466)||(37529108-37529182)
chr2 (406-475)||(6075485-6075554)
chr2 (396-468)||(4794567-4794639)
chr2 (486-550)||(14286086-14286150)
chr2 (386-466)||(14384309-14384389)
chr2 (486-550)||(45301919-45301983)
chr2 (397-460)||(3100402-3100465)
chr2 (386-465)||(8550673-8550752)
chr2 (491-546)||(27986198-27986253)
chr2 (491-546)||(28072730-28072785)
chr2 (397-463)||(23684958-23685024)
chr2 (397-463)||(28301433-28301499)
chr2 (396-466)||(44424304-44424374)
chr2 (397-463)||(44534525-44534591)
chr2 (397-454)||(5212000-5212057)
chr2 (386-466)||(43182270-43182348)
chr2 (403-475)||(3487381-3487453)
chr2 (486-550)||(37038692-37038756)
chr2 (473-568)||(5717652-5717745)
chr2 (398-465)||(6685706-6685773)
chr2 (387-477)||(24451769-24451857)
chr2 (386-469)||(31592543-31592626)
chr2 (416-463)||(33880157-33880204)
chr2 (474-541)||(35799391-35799458)
chr2 (388-463)||(41436078-41436153)
chr2 (491-546)||(45423778-45423833)
chr2 (386-432)||(9912469-9912515)
chr2 (396-466)||(10069626-10069696)
chr2 (397-463)||(30757610-30757676)
chr2 (486-543)||(4051687-4051744)
chr2 (415-455)||(5711000-5711040)
chr2 (386-434)||(25604389-25604437)
chr2 (392-477)||(36748128-36748218)
chr2 (386-469)||(38872953-38873034)
chr2 (471-538)||(681674-681741)
chr2 (396-475)||(6213891-6213970)
chr2 (387-466)||(39095627-39095706)
chr2 (396-466)||(2756670-2756740)
chr2 (513-551)||(8540204-8540242)
chr2 (397-479)||(11726764-11726846)
chr2 (396-434)||(11842563-11842601)
chr2 (396-454)||(13026575-13026633)
chr2 (401-463)||(15859388-15859450)
chr2 (397-463)||(37247926-37247992)
chr2 (476-550)||(43971942-43972016)
chr2 (386-475)||(6723891-6723979)
chr2 (418-463)||(28526963-28527008)
chr2 (416-469)||(44736712-44736765)
chr2 (422-466)||(5007609-5007653)
chr2 (399-455)||(36396502-36396558)
chr2 (386-466)||(40710573-40710653)
chr2 (396-432)||(43056405-43056441)
[»] chr1 (99 HSPs)
chr1 (386-469)||(24131432-24131515)
chr1 (386-475)||(29756174-29756263)
chr1 (386-469)||(2886164-2886247)
chr1 (386-475)||(46363443-46363532)
chr1 (386-469)||(26583721-26583804)
chr1 (387-469)||(12267664-12267746)
chr1 (386-475)||(27932865-27932954)
chr1 (386-469)||(31798411-31798494)
chr1 (387-465)||(10587614-10587692)
chr1 (396-469)||(19349036-19349109)
chr1 (386-466)||(37925278-37925358)
chr1 (387-474)||(4466187-4466274)
chr1 (386-453)||(51049517-51049584)
chr1 (388-466)||(33149269-33149347)
chr1 (386-463)||(2219480-2219557)
chr1 (396-469)||(29225746-29225819)
chr1 (482-550)||(50249466-50249534)
chr1 (386-466)||(52382418-52382498)
chr1 (386-469)||(36232821-36232904)
chr1 (386-452)||(40754445-40754511)
chr1 (398-475)||(52146699-52146776)
chr1 (386-474)||(705381-705469)
chr1 (387-466)||(11425902-11425981)
chr1 (386-469)||(27209999-27210082)
chr1 (386-444)||(26924152-26924210)
chr1 (486-568)||(34047164-34047244)
chr1 (386-469)||(37541145-37541230)
chr1 (486-568)||(52023905-52023984)
chr1 (388-465)||(50333932-50334009)
chr1 (386-466)||(14352562-14352642)
chr1 (386-466)||(18186238-18186318)
chr1 (386-465)||(5115857-5115936)
chr1 (387-466)||(16040073-16040152)
chr1 (386-469)||(29225440-29225522)
chr1 (386-465)||(44580513-44580592)
chr1 (397-463)||(8327716-8327782)
chr1 (486-548)||(25487242-25487304)
chr1 (401-475)||(35622826-35622900)
chr1 (396-469)||(3718891-3718964)
chr1 (486-551)||(14373344-14373409)
chr1 (416-469)||(16451624-16451677)
chr1 (416-469)||(16460777-16460830)
chr1 (386-447)||(37495844-37495905)
chr1 (387-460)||(50086011-50086084)
chr1 (486-550)||(26352012-26352076)
chr1 (486-550)||(30293492-30293556)
chr1 (386-465)||(13500761-13500840)
chr1 (396-463)||(51749225-51749292)
chr1 (397-463)||(5442339-5442405)
chr1 (476-570)||(27721211-27721303)
chr1 (396-469)||(27831838-27831912)
chr1 (397-463)||(28839338-28839404)
chr1 (386-444)||(37281029-37281087)
chr1 (397-463)||(38664400-38664466)
chr1 (387-465)||(40061806-40061884)
chr1 (396-469)||(2571356-2571429)
chr1 (422-475)||(7075471-7075524)
chr1 (386-474)||(26040629-26040720)
chr1 (513-550)||(39125759-39125796)
chr1 (486-550)||(34032011-34032075)
chr1 (486-550)||(44257613-44257676)
chr1 (491-550)||(12591018-12591077)
chr1 (400-463)||(17724760-17724823)
chr1 (396-463)||(46496017-46496084)
chr1 (397-463)||(3555598-3555664)
chr1 (386-444)||(5503438-5503496)
chr1 (386-464)||(17342826-17342904)
chr1 (416-466)||(20988544-20988594)
chr1 (396-474)||(30903269-30903347)
chr1 (473-543)||(44938490-44938560)
chr1 (413-475)||(50926168-50926229)
chr1 (513-550)||(27721114-27721151)
chr1 (386-455)||(47293631-47293699)
chr1 (416-469)||(50773396-50773449)
chr1 (398-451)||(52146396-52146449)
chr1 (386-465)||(28706655-28706735)
chr1 (486-550)||(29568062-29568126)
chr1 (396-464)||(34877132-34877200)
chr1 (386-477)||(25983660-25983751)
chr1 (396-463)||(32587764-32587831)
chr1 (396-455)||(34813924-34813983)
chr1 (395-466)||(39420580-39420651)
chr1 (419-454)||(45049040-45049075)
chr1 (386-429)||(45305886-45305929)
chr1 (396-463)||(45889290-45889357)
chr1 (476-550)||(12484549-12484623)
chr1 (476-550)||(26594980-26595054)
chr1 (386-428)||(26606169-26606211)
chr1 (476-538)||(28410729-28410791)
chr1 (397-463)||(36784313-36784379)
chr1 (513-550)||(14625-14662)
chr1 (513-550)||(8989587-8989624)
chr1 (410-475)||(15290480-15290545)
chr1 (386-455)||(50267470-50267539)
chr1 (486-550)||(8894936-8895000)
chr1 (518-546)||(14593308-14593336)
chr1 (486-550)||(18794463-18794527)
chr1 (386-454)||(21304838-21304906)
chr1 (387-447)||(27142956-27143015)
[»] chr6 (35 HSPs)
chr6 (386-469)||(15371894-15371977)
chr6 (386-475)||(33017975-33018064)
chr6 (387-469)||(33921501-33921583)
chr6 (386-475)||(4552896-4552985)
chr6 (386-466)||(2310319-2310399)
chr6 (397-466)||(34803749-34803818)
chr6 (389-465)||(15321259-15321335)
chr6 (389-466)||(15351417-15351494)
chr6 (486-550)||(4850428-4850492)
chr6 (389-469)||(15325140-15325220)
chr6 (476-568)||(32429427-32429517)
chr6 (386-469)||(8232342-8232424)
chr6 (476-550)||(29400101-29400175)
chr6 (392-469)||(3166145-3166222)
chr6 (387-466)||(9354472-9354554)
chr6 (396-450)||(31075965-31076019)
chr6 (476-550)||(13011260-13011334)
chr6 (397-463)||(31265778-31265844)
chr6 (402-463)||(3604647-3604708)
chr6 (491-550)||(19689486-19689543)
chr6 (485-568)||(13503765-13503846)
chr6 (401-463)||(30063995-30064057)
chr6 (386-447)||(15355590-15355651)
chr6 (386-450)||(3874081-3874145)
chr6 (474-550)||(3988655-3988730)
chr6 (476-536)||(21271315-21271375)
chr6 (416-463)||(15081422-15081469)
chr6 (403-469)||(8569787-8569853)
chr6 (396-430)||(16126243-16126277)
chr6 (398-464)||(26356267-26356333)
chr6 (476-550)||(31233534-31233608)
chr6 (416-474)||(33109361-33109419)
chr6 (390-475)||(28538983-28539068)
chr6 (398-454)||(117087-117143)
chr6 (486-550)||(17552169-17552233)
[»] chr3 (55 HSPs)
chr3 (386-469)||(1923083-1923166)
chr3 (386-468)||(53051020-53051102)
chr3 (393-469)||(46194244-46194320)
chr3 (386-463)||(1334812-1334889)
chr3 (388-469)||(48409577-48409658)
chr3 (386-477)||(32977821-32977911)
chr3 (387-467)||(21585442-21585522)
chr3 (387-474)||(29858897-29858984)
chr3 (386-469)||(38600837-38600920)
chr3 (386-469)||(41287255-41287338)
chr3 (397-463)||(21296545-21296611)
chr3 (486-568)||(44064385-44064465)
chr3 (386-474)||(42547137-42547225)
chr3 (476-548)||(42571449-42571521)
chr3 (386-469)||(39329781-39329864)
chr3 (386-477)||(53754095-53754186)
chr3 (397-463)||(43639558-43639624)
chr3 (386-463)||(51164950-51165028)
chr3 (386-455)||(54021489-54021558)
chr3 (386-469)||(9218138-9218221)
chr3 (483-568)||(50038099-50038181)
chr3 (397-463)||(54122266-54122332)
chr3 (396-469)||(44219074-44219147)
chr3 (389-465)||(47496166-47496242)
chr3 (475-550)||(42886905-42886980)
chr3 (396-466)||(3862213-3862283)
chr3 (397-463)||(15280604-15280670)
chr3 (397-463)||(26134745-26134811)
chr3 (416-469)||(50736094-50736147)
chr3 (416-469)||(50776708-50776761)
chr3 (474-550)||(4759446-4759522)
chr3 (399-475)||(50150411-50150487)
chr3 (396-465)||(30261542-30261612)
chr3 (397-463)||(54845558-54845624)
chr3 (518-551)||(19115541-19115574)
chr3 (477-550)||(22857222-22857295)
chr3 (396-465)||(27668368-27668437)
chr3 (397-466)||(52325173-52325242)
chr3 (419-463)||(47684766-47684810)
chr3 (487-550)||(11337543-11337606)
chr3 (416-475)||(37041934-37041993)
chr3 (400-475)||(45746353-45746428)
chr3 (473-550)||(3986017-3986092)
chr3 (397-463)||(5245411-5245477)
chr3 (400-462)||(26832071-26832133)
chr3 (401-463)||(32023147-32023209)
chr3 (397-463)||(39866595-39866661)
chr3 (396-454)||(46627966-46628024)
chr3 (397-451)||(46786023-46786077)
chr3 (402-455)||(7885750-7885803)
chr3 (386-463)||(15082002-15082078)
chr3 (513-550)||(25363525-25363562)
chr3 (486-550)||(48901873-48901937)
chr3 (486-550)||(50646061-50646125)
chr3 (486-538)||(51057679-51057731)
[»] chr8 (80 HSPs)
chr8 (386-469)||(14689953-14690036)
chr8 (386-468)||(28791302-28791384)
chr8 (386-474)||(14748737-14748825)
chr8 (386-466)||(41726517-41726597)
chr8 (386-469)||(45420970-45421054)
chr8 (386-469)||(2195461-2195544)
chr8 (486-568)||(396147-396227)
chr8 (386-464)||(41759661-41759739)
chr8 (396-469)||(7258408-7258481)
chr8 (486-550)||(15160379-15160443)
chr8 (386-466)||(40077781-40077861)
chr8 (386-477)||(2797025-2797116)
chr8 (387-466)||(29638297-29638376)
chr8 (386-468)||(8618122-8618204)
chr8 (403-469)||(32231768-32231834)
chr8 (388-465)||(37459347-37459424)
chr8 (386-466)||(32679031-32679111)
chr8 (386-454)||(39998171-39998239)
chr8 (388-475)||(14117449-14117536)
chr8 (386-469)||(25174616-25174699)
chr8 (475-550)||(39765782-39765857)
chr8 (386-469)||(42412414-42412497)
chr8 (386-466)||(886479-886559)
chr8 (386-465)||(1494279-1494356)
chr8 (387-467)||(2875118-2875198)
chr8 (386-466)||(8418333-8418413)
chr8 (386-469)||(10728953-10729036)
chr8 (387-454)||(11637148-11637215)
chr8 (386-477)||(33743761-33743852)
chr8 (397-463)||(5392048-5392114)
chr8 (486-568)||(43724522-43724602)
chr8 (393-472)||(17005938-17006014)
chr8 (393-472)||(17571234-17571310)
chr8 (396-465)||(27987655-27987724)
chr8 (396-465)||(28044957-28045026)
chr8 (386-463)||(32241455-32241532)
chr8 (386-463)||(38201422-38201499)
chr8 (390-475)||(43844918-43845002)
chr8 (396-464)||(15559171-15559239)
chr8 (471-550)||(40399785-40399864)
chr8 (397-463)||(31132729-31132795)
chr8 (397-463)||(33190951-33191017)
chr8 (401-463)||(33925130-33925192)
chr8 (397-463)||(44790464-44790530)
chr8 (386-447)||(8394286-8394347)
chr8 (487-548)||(12339880-12339941)
chr8 (396-473)||(27973727-27973804)
chr8 (396-473)||(28030996-28031073)
chr8 (396-477)||(29451334-29451415)
chr8 (491-568)||(37559471-37559546)
chr8 (476-543)||(24245130-24245197)
chr8 (397-463)||(4274341-4274407)
chr8 (396-454)||(27868366-27868424)
chr8 (397-463)||(39171542-39171608)
chr8 (390-475)||(23764953-23765038)
chr8 (396-465)||(27875183-27875252)
chr8 (396-475)||(1230403-1230483)
chr8 (486-550)||(6115927-6115991)
chr8 (418-474)||(36012035-36012091)
chr8 (396-447)||(5878267-5878318)
chr8 (476-551)||(31233857-31233932)
chr8 (401-463)||(5962519-5962581)
chr8 (400-454)||(7755104-7755158)
chr8 (476-538)||(9419986-9420048)
chr8 (386-428)||(9734198-9734240)
chr8 (397-463)||(28802766-28802832)
chr8 (396-454)||(29567213-29567271)
chr8 (396-466)||(33826227-33826297)
chr8 (397-455)||(42558623-42558681)
chr8 (401-463)||(44615411-44615473)
chr8 (513-550)||(5295356-5295393)
chr8 (475-540)||(11335950-11336015)
chr8 (397-454)||(31410650-31410707)
chr8 (487-556)||(40362586-40362654)
chr8 (387-463)||(2119715-2119791)
chr8 (447-475)||(8394608-8394636)
chr8 (511-551)||(17656062-17656102)
chr8 (395-459)||(17790110-17790174)
chr8 (403-463)||(21587276-21587336)
chr8 (399-463)||(29615797-29615861)
[»] chr7 (78 HSPs)
chr7 (386-469)||(38589727-38589810)
chr7 (386-466)||(29997060-29997140)
chr7 (386-469)||(32775976-32776059)
chr7 (393-465)||(37264310-37264382)
chr7 (475-550)||(6747382-6747457)
chr7 (386-465)||(9602858-9602937)
chr7 (386-465)||(9830429-9830508)
chr7 (397-463)||(38181916-38181982)
chr7 (386-466)||(2849251-2849331)
chr7 (386-466)||(32972049-32972129)
chr7 (386-450)||(45218189-45218253)
chr7 (386-469)||(27337904-27337987)
chr7 (386-469)||(47238210-47238293)
chr7 (388-466)||(39343704-39343782)
chr7 (475-568)||(2297183-2297274)
chr7 (475-568)||(37502459-37502550)
chr7 (486-550)||(715794-715858)
chr7 (486-550)||(12977617-12977681)
chr7 (486-550)||(12983075-12983139)
chr7 (486-550)||(18270734-18270798)
chr7 (486-550)||(18292491-18292555)
chr7 (386-466)||(30462656-30462736)
chr7 (389-469)||(30659514-30659594)
chr7 (396-475)||(25778731-25778810)
chr7 (386-468)||(24288417-24288499)
chr7 (392-469)||(5068335-5068412)
chr7 (396-465)||(39498671-39498740)
chr7 (474-550)||(31929778-31929854)
chr7 (388-469)||(18731435-18731513)
chr7 (386-469)||(37496428-37496511)
chr7 (425-475)||(27621828-27621878)
chr7 (397-463)||(33584562-33584628)
chr7 (397-462)||(7425920-7425985)
chr7 (393-466)||(10355773-10355846)
chr7 (396-469)||(14648960-14649033)
chr7 (396-469)||(28333164-28333237)
chr7 (504-568)||(25441012-25441074)
chr7 (386-466)||(34064211-34064291)
chr7 (418-469)||(23111593-23111644)
chr7 (386-469)||(43007887-43007970)
chr7 (397-463)||(29257546-29257612)
chr7 (386-475)||(36070093-36070181)
chr7 (388-475)||(39143880-39143967)
chr7 (396-462)||(25940790-25940856)
chr7 (397-463)||(46288473-46288539)
chr7 (386-455)||(1643369-1643438)
chr7 (396-469)||(3667918-3667991)
chr7 (418-463)||(12308377-12308422)
chr7 (386-454)||(21412066-21412134)
chr7 (396-455)||(19687965-19688025)
chr7 (399-463)||(29434624-29434688)
chr7 (397-469)||(31581485-31581557)
chr7 (520-568)||(31883924-31883970)
chr7 (386-441)||(6838083-6838138)
chr7 (397-463)||(11616560-11616627)
chr7 (386-469)||(17266020-17266103)
chr7 (472-551)||(47461282-47461361)
chr7 (491-550)||(48843721-48843780)
chr7 (397-463)||(2846718-2846784)
chr7 (396-466)||(6591582-6591652)
chr7 (397-463)||(23186185-23186251)
chr7 (397-455)||(33774085-33774143)
chr7 (396-454)||(34001900-34001958)
chr7 (476-550)||(34274950-34275024)
chr7 (476-546)||(42286068-42286138)
chr7 (397-454)||(2842094-2842151)
chr7 (417-466)||(3781240-3781289)
chr7 (513-550)||(4268819-4268856)
chr7 (513-550)||(4268898-4268935)
chr7 (476-509)||(16562800-16562833)
chr7 (476-509)||(16602829-16602862)
chr7 (397-474)||(27234491-27234568)
chr7 (400-465)||(27242775-27242840)
chr7 (396-475)||(32346508-32346584)
chr7 (515-570)||(44567002-44567054)
chr7 (397-469)||(23703909-23703981)
chr7 (386-466)||(30459058-30459138)
chr7 (397-453)||(46095462-46095518)
[»] scaffold0221 (1 HSPs)
scaffold0221 (387-474)||(10823-10910)
[»] chr4 (86 HSPs)
chr4 (386-469)||(37315953-37316036)
chr4 (386-469)||(38319904-38319987)
chr4 (386-469)||(42132806-42132889)
chr4 (388-469)||(54217335-54217416)
chr4 (386-469)||(8759772-8759855)
chr4 (392-466)||(29550764-29550838)
chr4 (386-475)||(28330781-28330870)
chr4 (386-466)||(10099756-10099836)
chr4 (386-474)||(36047131-36047219)
chr4 (386-463)||(39052932-39053009)
chr4 (386-466)||(20964319-20964399)
chr4 (387-463)||(35998149-35998225)
chr4 (486-549)||(22220296-22220359)
chr4 (395-469)||(25149444-25149518)
chr4 (396-477)||(22020551-22020632)
chr4 (386-475)||(32949880-32949969)
chr4 (486-551)||(38510182-38510247)
chr4 (393-466)||(49218820-49218893)
chr4 (386-475)||(55360379-55360468)
chr4 (474-550)||(7905921-7905997)
chr4 (486-570)||(25231313-25231395)
chr4 (486-568)||(52915479-52915559)
chr4 (392-477)||(4354434-4354518)
chr4 (396-465)||(49448838-49448907)
chr4 (474-570)||(43337672-43337766)
chr4 (386-474)||(44633145-44633232)
chr4 (386-469)||(22872419-22872502)
chr4 (388-455)||(48400664-48400731)
chr4 (397-463)||(1796284-1796350)
chr4 (476-550)||(4505492-4505566)
chr4 (397-463)||(18849801-18849867)
chr4 (486-568)||(37624696-37624776)
chr4 (397-465)||(47846896-47846964)
chr4 (474-550)||(51733420-51733495)
chr4 (396-466)||(5499470-5499540)
chr4 (397-463)||(26799258-26799324)
chr4 (396-466)||(40020989-40021059)
chr4 (397-463)||(41710186-41710252)
chr4 (387-465)||(47277714-47277792)
chr4 (397-463)||(49306586-49306652)
chr4 (388-469)||(4357561-4357641)
chr4 (397-474)||(41436469-41436546)
chr4 (395-475)||(3505709-3505789)
chr4 (386-466)||(28279833-28279913)
chr4 (386-466)||(42051687-42051767)
chr4 (397-465)||(51572270-51572338)
chr4 (397-463)||(8295030-8295094)
chr4 (416-475)||(9052111-9052170)
chr4 (397-444)||(43421318-43421365)
chr4 (387-466)||(49401652-49401731)
chr4 (386-463)||(34790982-34791060)
chr4 (397-463)||(37309697-37309763)
chr4 (396-434)||(38615004-38615042)
chr4 (400-469)||(4360453-4360522)
chr4 (397-466)||(17237039-17237108)
chr4 (420-465)||(22129136-22129181)
chr4 (513-550)||(28308882-28308919)
chr4 (386-475)||(38160183-38160272)
chr4 (416-469)||(42185857-42185910)
chr4 (396-469)||(46958715-46958788)
chr4 (386-447)||(53848661-53848722)
chr4 (396-476)||(12619674-12619754)
chr4 (486-550)||(19451131-19451195)
chr4 (386-454)||(37786969-37787037)
chr4 (403-463)||(39976438-39976498)
chr4 (403-454)||(18509454-18509505)
chr4 (396-467)||(25250634-25250705)
chr4 (416-463)||(29815158-29815205)
chr4 (401-463)||(3686010-3686072)
chr4 (416-462)||(16493357-16493403)
chr4 (401-475)||(27977134-27977208)
chr4 (397-463)||(29644354-29644420)
chr4 (401-463)||(32559162-32559224)
chr4 (401-463)||(42024247-42024309)
chr4 (397-463)||(42544208-42544274)
chr4 (397-463)||(47787889-47787955)
chr4 (476-550)||(47817905-47817979)
chr4 (397-463)||(54729526-54729591)
chr4 (398-451)||(3512036-3512089)
chr4 (397-454)||(10309297-10309354)
chr4 (409-477)||(11469843-11469910)
chr4 (409-477)||(11521551-11521618)
chr4 (476-528)||(24157310-24157362)
chr4 (482-550)||(30261425-30261493)
chr4 (388-440)||(30680471-30680523)
chr4 (518-550)||(36558258-36558290)
[»] chr5 (75 HSPs)
chr5 (386-466)||(15898187-15898267)
chr5 (473-550)||(10344852-10344929)
chr5 (386-469)||(25108566-25108649)
chr5 (386-469)||(25167658-25167741)
chr5 (386-465)||(39060986-39061065)
chr5 (393-464)||(13016402-13016473)
chr5 (386-469)||(25111180-25111263)
chr5 (386-469)||(25170271-25170354)
chr5 (386-466)||(31090300-31090380)
chr5 (393-464)||(13087780-13087851)
chr5 (386-469)||(36006924-36007007)
chr5 (387-466)||(38978900-38978979)
chr5 (396-475)||(39212593-39212671)
chr5 (386-465)||(43525475-43525553)
chr5 (476-550)||(4631086-4631160)
chr5 (387-465)||(5357850-5357928)
chr5 (396-466)||(6173022-6173092)
chr5 (386-455)||(791983-792052)
chr5 (418-466)||(4194636-4194684)
chr5 (474-550)||(32158698-32158774)
chr5 (386-466)||(42818900-42818979)
chr5 (386-465)||(10044665-10044744)
chr5 (386-469)||(16926123-16926204)
chr5 (392-466)||(7871310-7871383)
chr5 (397-463)||(8369739-8369805)
chr5 (397-463)||(8692861-8692927)
chr5 (397-463)||(35334569-35334635)
chr5 (397-463)||(35646132-35646198)
chr5 (397-475)||(36469137-36469215)
chr5 (397-463)||(42575681-42575747)
chr5 (396-465)||(16883973-16884042)
chr5 (387-463)||(858334-858410)
chr5 (386-454)||(4044509-4044577)
chr5 (486-550)||(25362734-25362797)
chr5 (396-476)||(41268324-41268404)
chr5 (396-467)||(72147-72218)
chr5 (482-550)||(7317184-7317248)
chr5 (397-476)||(17699319-17699398)
chr5 (395-466)||(19889574-19889645)
chr5 (396-466)||(5072946-5073016)
chr5 (397-463)||(11099520-11099586)
chr5 (397-463)||(17242997-17243063)
chr5 (397-463)||(22582915-22582980)
chr5 (397-475)||(32539649-32539727)
chr5 (397-455)||(36446730-36446788)
chr5 (396-465)||(35988631-35988700)
chr5 (397-466)||(39183670-39183739)
chr5 (486-550)||(1309281-1309345)
chr5 (486-550)||(11977754-11977818)
chr5 (483-550)||(4911029-4911096)
chr5 (513-568)||(43584336-43584389)
chr5 (386-428)||(5147528-5147570)
chr5 (395-457)||(15564929-15564991)
chr5 (397-463)||(39008128-39008193)
chr5 (387-445)||(39060455-39060513)
chr5 (397-463)||(42211332-42211398)
chr5 (386-447)||(16954880-16954940)
chr5 (386-463)||(39035887-39035964)
chr5 (486-550)||(13974440-13974504)
chr5 (397-465)||(15254762-15254830)
chr5 (397-465)||(16283630-16283698)
chr5 (396-464)||(32659814-32659882)
chr5 (483-546)||(21634281-21634344)
chr5 (483-546)||(21642528-21642591)
chr5 (486-550)||(35765831-35765897)
chr5 (397-463)||(13135752-13135818)
chr5 (396-454)||(25344780-25344838)
chr5 (397-463)||(33988199-33988265)
chr5 (402-459)||(146748-146805)
chr5 (522-551)||(4631048-4631077)
chr5 (386-463)||(20189891-20189968)
chr5 (386-447)||(31196334-31196395)
chr5 (386-465)||(6629424-6629504)
chr5 (486-534)||(11970376-11970424)
chr5 (395-466)||(17741211-17741285)
[»] scaffold0003 (1 HSPs)
scaffold0003 (386-469)||(352492-352575)
[»] scaffold0685 (1 HSPs)
scaffold0685 (386-466)||(6431-6511)
[»] scaffold0007 (1 HSPs)
scaffold0007 (396-463)||(230255-230322)
[»] scaffold0332 (1 HSPs)
scaffold0332 (486-568)||(3743-3823)
[»] scaffold0155 (1 HSPs)
scaffold0155 (393-467)||(7992-8066)
[»] scaffold0006 (1 HSPs)
scaffold0006 (386-463)||(229822-229899)
[»] scaffold0086 (1 HSPs)
scaffold0086 (393-469)||(5811-5887)
[»] scaffold0262 (1 HSPs)
scaffold0262 (386-464)||(12467-12545)
[»] scaffold0009 (1 HSPs)
scaffold0009 (390-444)||(220011-220065)
[»] scaffold0565 (1 HSPs)
scaffold0565 (475-551)||(9866-9942)
[»] scaffold0028 (1 HSPs)
scaffold0028 (397-469)||(26606-26678)
[»] scaffold0001 (1 HSPs)
scaffold0001 (388-463)||(394777-394852)
[»] scaffold0654 (1 HSPs)
scaffold0654 (406-475)||(2709-2778)
[»] scaffold0576 (1 HSPs)
scaffold0576 (386-447)||(580-641)
[»] scaffold0300 (1 HSPs)
scaffold0300 (473-536)||(4743-4806)
[»] scaffold0020 (1 HSPs)
scaffold0020 (396-466)||(171222-171292)
[»] scaffold0578 (1 HSPs)
scaffold0578 (422-466)||(4025-4069)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 133 - 366
Target Start/End: Original strand, 43426772 - 43427010
Alignment:
Q  133 tatctagtaatatgatttgtacggacacgttgtagcatggattacggcaaattatacattttccaaatgccttaggccatagggatcaagatagggttaa 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43426772 tatctaataatatgatttgtacggacacgttgtagcatggattacggcaaattatacattttccaaatgccttagaccatagggatcaagatagggttaa 43426871  T
Q  233 tgaggcaaagtcaagcttttgcatactttatcctt-----cnnnnnnnnnnnnnnngtttttgcatactttagttgcagagacttattaatgtctagact 327  Q
    |||||||||||||||||||||||||||||||||||                     ||||||||||||||||||||  ||||||||||||||||||||||    
T  43426872 tgaggcaaagtcaagcttttgcatactttatccttaaaaaaaaaaaaaaaaaaaaagtttttgcatactttagttgtggagacttattaatgtctagact 43426971  T
Q  328 ataataattcaagatatgttatagtaacacatccttcct 366  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43426972 ataataattcaagatatgttatagtaacacatccttcct 43427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 366 - 538
Target Start/End: Original strand, 43427096 - 43427273
Alignment:
Q  366 tgcccttgtgaa-ctatcacggcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    |||||||||||| |||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  43427096 tgcccttgtgaaactattagtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaagtagtattaattagtgttataat 43427195  T
Q  465 tggaagaaaaa----tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaat 538  Q
    |||||||||||    |||| |||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  43427196 tggaagaaaaaatagtactttctccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaat 43427273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 43426546 - 43426624
Alignment:
Q  56 tagccatttcattgcccgtcctaaatattaaaattttcagtctcaagtaaacaaaattatctccgatgataaagatcta 134  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43426546 tagccatttcattggccgtcctaaatattaaaattttcagtctcaagtaaacaaaattatctccgatgataaagatcta 43426624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 3199965 - 3199885
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  3199965 tttatcataaatgcaaagtataatatattgaattgggagtggtgaaagtagtattaattagagttataattagaagaaaaa 3199885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 474
Target Start/End: Complemental strand, 2427436 - 2427348
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||||||  |||||||||||||| ||||    
T  2427436 gcattcttctttgtcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattgatgttataattggaaaaaaa 2427348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 7931527 - 7931607
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  7931527 gcattcttctttatcataaatgtaaagtaaaatatattgaattgagagttgtgaaagtagtattaattagagttataattg 7931607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 13222142 - 13222064
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  13222142 attcttctttatcataaatgcaaagtaaaatatattgaattggaagtggtgaaagtaatattaattagtgttataattg 13222064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 928569 - 928647
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||||||||||||| ||||||||  |||| |||| |||||||||||||||||||||||||||||||    
T  928569 gcattcttctttatcataaatgcaaaatagaatatatt--attgagagtggtgaaagtagtattaattagtgttataattg 928647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 6972571 - 6972659
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||| || |||||| |||||||||||||||||||| |||||||||    
T  6972571 gcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtaaaagtaatattaattagtgttataatt-gaagaaaaa 6972659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 24356187 - 24356107
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  24356187 gcattcttctttatcataaatgtaaagtagaatatgttgaattgggagtcgtgaaagtagtattaattagagttataattg 24356107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 31348587 - 31348504
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||| ||||||||||||||| | || ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  31348587 gcattcttttttatcataaatgcatagtagaatatattgaattaggaatggtgaaagtagtattaattagtgttataattggaa 31348504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 549
Target Start/End: Original strand, 17695740 - 17695821
Alignment:
Q  468 aagaaaaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaa 549  Q
    ||||||| ||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||| ||||    
T  17695740 aagaaaagtactctctccgtttcaaaatgagtgtcgttttagatgtttacacacatattaagaaatgcagtgattaagagaa 17695821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 28844133 - 28844046
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||| ||||||||| |||| ||||| ||||||||| ||| |||||    
T  28844133 attcttctttatcataaatgtaaagtataatatattgaattgagagtggtgaaagtattatttattagagttataattagaaaaaaaa 28844046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 7213551 - 7213474
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||| ||||||| ||| |  |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  7213551 gcattcttctttattataaatgtaaagtggaatatattgaattgagagttgtgaaagtagtattaattagagttataa 7213474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 32022834 - 32022913
Alignment:
Q  487 tttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  32022834 tttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgtaatgattaaaag-aaagag-aatgattatttta 32022913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 1908525 - 1908605
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| ||| |||||| || |||||||||| ||||||||||    
T  1908525 gcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaaataatattaattagagttataattg 1908605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 2048368 - 2048288
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||| ||||||||||||||||| || |||||||||||||| |||| |||||| || |||||||||| ||||||||||    
T  2048368 gcattcttgtttatcataaatgcaaagtagaatatattgaattgagagtagtgaaaataatattaattagagttataattg 2048288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 474
Target Start/End: Complemental strand, 18460563 - 18460476
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||||| ||||||||| ||| || |||||||||||||| |||||||  ||||| |||||||||| ||||||||||||| ||||    
T  18460563 cattcttctttgtcataaatgtaaagtagaatatattgaattgagagttgtagaagtaatattaattagagttataattggaaaaaaa 18460476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 22620268 - 22620331
Alignment:
Q  487 tttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||    
T  22620268 tttcaaaatgagtgtcgttttagatgtttacacacatattaaaaaatgcaatgattaaaagaaa 22620331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 9724954 - 9724879
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||||||| ||| || |||||||||||||||| |  |||||||||||||||||||| |||||||    
T  9724954 gcattcttctttatcataaatgtaaagtagaatatattgaattggggg--gtgaaagtagtattaattagagttataa 9724879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 28572273 - 28572207
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||  |||||||    
T  28572273 tatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagtagtattaattacagttataa 28572207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 4283050 - 4283139
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||| ||||||||||||||| |||||| |||||||||||||| |||| || |||||||||| |||||| ||| |||||| || |||||    
T  4283050 gcattcctctttatcataaatgtaaaatagaatatattgaattgagagtggtaaaagtagtataaattagagttgtaattgaaaaaaaaa 4283139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 477
Target Start/End: Original strand, 18181255 - 18181335
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    ||||||||||||||| || ||||| ||||||||||| |  ||||||||||||||||||| ||||||||| ||| |||||||    
T  18181255 tatcataaatgcaaagtagaatattttgaattgggaataatgaaagtagtattaattagagttataattagaaaaaaaata 18181335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 467
Target Start/End: Complemental strand, 19515956 - 19515876
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgg 467  Q
    |||| ||| |||||||||||||||| || ||||||||||||||  |||  ||||||||||||||||||| |||||||||||    
T  19515956 catttttcattatcataaatgcaaagtaaaatatattgaattgtaagtaatgaaagtagtattaattagagttataattgg 19515876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 477
Target Start/End: Complemental strand, 314503 - 314421
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||||||||||||||||||||||| || ||||||||||||         |||||||||||||||||| |||||||||||||| |||||||    
T  314503 gcattcttctttatcataaatgcaaagtagaatatattgaat---------tgaaagtagtattaattaatgttataattggaaaaaaaata 314421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 9472497 - 9472418
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||||| | | || ||||||||||||||  ||| |||||||||||||||||||  ||||||||||    
T  9472497 cattcttctttatcataaatgtatagtagaatatattgaattgatagtggtgaaagtagtattaattatagttataattg 9472418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 387 - 454
Target Start/End: Original strand, 39166728 - 39166795
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||| ||| |||||    
T  39166728 cattcttttttatcataaatgtaaagtataatatattgaattgggagtagtgaaagtaatataaatta 39166795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 26273825 - 26273767
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||    
T  26273825 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaatta 26273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 37529108 - 37529182
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| ||| || |||| |||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  37529108 ttctttatcataaatgtaaagtagaataaattgaattggaagtggtgaaagtaatattaattagagttataattg 37529182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 475
Target Start/End: Complemental strand, 6075554 - 6075485
Alignment:
Q  406 tgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||| || |||||||| ||||||||||  ||||||||||||||||||| ||||||||||||| |||||    
T  6075554 tgcaaagtagaatatattaaattgggagtgatgaaagtagtattaattagagttataattggaaaaaaaa 6075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 4794639 - 4794567
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgga 468  Q
    |||||||||||||||| |  ||||||||||||||  |||  ||||||||||||||||||| ||||||||||||    
T  4794639 ttatcataaatgcaaagtggaatatattgaattgaaagtgatgaaagtagtattaattagagttataattgga 4794567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 14286150 - 14286086
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| |||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||    
T  14286150 gttttaaaatgagtgtcgttttaggagtttacacacatattaagaaatgcaatgattaaaagaaa 14286086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 14384309 - 14384389
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||| || |||||||||||| ||| ||||||||||||||||| ||||   ||||||||||||||||||  |||||||||    
T  14384309 gcattcatcattatcataaatgtaaagtataatatattgaattgagagtgaagaaagtagtattaattagaattataattg 14384389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 45301983 - 45301919
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||| | ||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  45301983 gtttcaaaatgagtattattttaggtctttacacacatattaataaatgcaataattaaaagaaa 45301919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 460
Target Start/End: Complemental strand, 3100465 - 3100402
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgtta 460  Q
    ||||||||||||||| |  |||||||| |||||| |||||||||||||||||||||||| ||||    
T  3100465 tatcataaatgcaaagtggaatatattaaattggaagttgtgaaagtagtattaattagagtta 3100402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 8550673 - 8550752
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||| | |||||||||||||||| | ||||||||||||||  ||||  ||||||||||||||||||  |||||||||    
T  8550673 gcattctccattatcataaatgcaaagtctaatatattgaattaagagtgatgaaagtagtattaattatagttataatt 8550752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 27986253 - 27986198
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaa 546  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||| |||||||    
T  27986253 aaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaattattaaaa 27986198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 28072785 - 28072730
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaa 546  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||| |||||||    
T  28072785 aaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaattattaaaa 28072730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 23685024 - 23684958
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||||||||||||||||| |||||||    
T  23685024 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataa 23684958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 28301499 - 28301433
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||||||||||||||||| |||||||    
T  28301499 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataa 28301433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 44424304 - 44424374
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| |  |||||||||||||| || |  ||||||||||||||||||| ||||||||||    
T  44424304 ttatcataaatgcaaagttgaatatattgaattgagaatgatgaaagtagtattaattagagttataattg 44424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 44534525 - 44534591
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| || ||||||| ||||||||||||| |||||||    
T  44534525 tatcataaatgcaaagtggaatatattgaattggaagctgtgaaattagtattaattagagttataa 44534591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 5212000 - 5212057
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||||||||||| |  ||||||||||||||  |||||||||||||||||||||||    
T  5212000 tatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaatta 5212057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 43182348 - 43182270
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||| ||||||| |   |||||||||||||||||| ||| |||||| ||||||||||||  ||||||||||    
T  43182348 gcattcttctttattataaatgtag--tataatatattgaattggaagtggtgaaaatagtattaattaaagttataattg 43182270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 3487453 - 3487381
Alignment:
Q  403 aaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||| || |||||||||||||| ||||  |||||||| |||||||||| || ||||||| ||||||||    
T  3487453 aaatgcaaagtagaatatattgaattgagagtgatgaaagtaatattaattagagtaataattgaaagaaaaa 3487381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 37038692 - 37038756
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| ||| | || ||||||||||||||||||||| || | |||||||||||    
T  37038692 gtttcaaaatgagtgtcgtttaagatttttacacacatattaagaaatacattaattaaaagaaa 37038756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 473 - 568
Target Start/End: Complemental strand, 5717745 - 5717652
Alignment:
Q  473 aaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||  || |||| |||||||||||  ||||| || |||||  ||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  5717745 aaatactccgtcggttttaaaatgagtgttgttttagatgtttacgtacatattaaaaaatgcaatgattaaaag-aaagag-aatgattatttta 5717652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 6685706 - 6685773
Alignment:
Q  398 atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||| ||| || ||||||||||||||| ||| |||||||| |||||||||||  ||||||||    
T  6685706 atcataaatgtaaagtagaatatattgaattggaagtggtgaaagttgtattaattagaattataatt 6685773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 477
Target Start/End: Complemental strand, 24451857 - 24451769
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||||||||||||||||||   | || ||||||||| ||||| ||  ||||||||| |||||||||| |||||||||| || |||||||    
T  24451857 cattcttctttatcataaatg--tagtagaatatattgtattggaaggggtgaaagtaatattaattagagttataattgaaaaaaaaata 24451769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 31592626 - 31592543
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||  ||||||||||| |||| || |||||||||||||| ||||  ||||| || |||||||||  |||||||||||||    
T  31592626 gcattctttcttatcataaatacaaagtagaatatattgaattgagagtgatgaaaataatattaattaaagttataattggaa 31592543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 33880204 - 33880157
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  33880204 aatatattgaattgggagtggtgaaagtaatattaattagagttataa 33880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 35799458 - 35799391
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgat 541  Q
    ||||||| ||| |||| ||||||| |||| |||||  | |||||||||||||||||||||||||||||    
T  35799458 aatactccctccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgcaatgat 35799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 463
Target Start/End: Complemental strand, 41436153 - 41436078
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||  ||||||||||||||| |  |||||||||||||| || |  ||||||||||||||||||| |||||||    
T  41436153 attcttcactatcataaatgcaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataa 41436078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 45423833 - 45423778
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaa 546  Q
    ||||||| |||| ||| |||| |||||||||||||||||||||| |||||||||||    
T  45423833 aaaatgaatgtcgtttaaaatttttacacacatattaagaaatgaaatgattaaaa 45423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 432
Target Start/End: Complemental strand, 9912515 - 9912469
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattggga 432  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||    
T  9912515 gcattcatcattatcataaatgtaaaatataatatattgaattggga 9912469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 10069626 - 10069696
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| |  |||||||||||||| ||||  |||||||| |||||||||| ||||| ||||    
T  10069626 ttatcataaatgcaaagtcgaatatattgaattgagagtgatgaaagtattattaattagagttatcattg 10069696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 30757610 - 30757676
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| |  ||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  30757610 tatcataaatgtaaattggaatatattgaattgggaatgatgaaagtagtattaattagagttataa 30757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 543
Target Start/End: Original strand, 4051687 - 4051744
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgatta 543  Q
    |||| |||||||||||| |||||  | |||||||||||| ||||||||||||||||||    
T  4051687 gttttaaaatgagtgtcgttttaggtgtttacacacatagtaagaaatgcaatgatta 4051744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 455
Target Start/End: Complemental strand, 5711040 - 5711000
Alignment:
Q  415 taatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  5711040 taatatattgaattgagagtggtgaaagtagtattaattag 5711000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 25604437 - 25604389
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagt 434  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||    
T  25604437 gcattctttcttatcataaatgcaaattagaatatattgaattgggagt 25604389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 477
Target Start/End: Complemental strand, 36748218 - 36748128
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagt------agtattaattagtgttataattggaagaaaaata 477  Q
    |||||||||||||||  ||| || |||||||||||||| || ||||||||||      |||||||||||| ||||||||||| |||||||||    
T  36748218 ttctttatcataaatttaaagtaaaatatattgaattgagaattgtgaaagtagtagtagtattaattagagttataattgg-agaaaaata 36748128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 38872953 - 38873034
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||| ||||||||||||||  ||| ||  |||||||||||||||||| |||||||||||||   |||| |||||||| ||||    
T  38872953 gcattcctctttatcataaatataaagta--atatattgaattgggagtggtgaaagtagtatcggttagagttataatcggaa 38873034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 538
Target Start/End: Original strand, 681674 - 681741
Alignment:
Q  471 aaaaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaat 538  Q
    |||| ||||| ||| ||||||||||||||||| ||| |  | ||| ||||||||||||||||||||||    
T  681674 aaaagtactccctccgtttcaaaatgagtgtcgtttaaggtttttgcacacatattaagaaatgcaat 681741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 6213891 - 6213970
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||| || |||||||| ||||  ||||  ||||||||||||||||||  |||| ||||| || |||||    
T  6213891 ttatcataaatgcaaagtagaatatattcaattaagagtgatgaaagtagtattaattaaagttaaaattgaaaaaaaaa 6213970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 39095706 - 39095627
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||| | |||||||||||||||| |  ||||||||||||||  |||  |||||||| |||||||||  ||||||||||    
T  39095706 cattctccattatcataaatgcaaagtggaatatattgaattgtcagtgatgaaagtaatattaattaaagttataattg 39095627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 2756740 - 2756670
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||| ||| || |||||||| |||||| |||  || || ||||||||||||| ||||||||||    
T  2756740 ttatcataaatgtaaagtagaatatattaaattggaagtgatgtaaatagtattaattagagttataattg 2756670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 551
Target Start/End: Complemental strand, 8540242 - 8540204
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  8540242 tttacacacatattaagaaatgcattaattaaaagaaaa 8540204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 479
Target Start/End: Original strand, 11726764 - 11726846
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaatact 479  Q
    |||||||| |||||| || |||||||||||||  ||||  ||||||||||||||||||   |||||||| ||| |||| ||||    
T  11726764 tatcataattgcaaagtagaatatattgaattaagagtgatgaaagtagtattaattaaaattataattagaaaaaaagtact 11726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 434
Target Start/End: Complemental strand, 11842601 - 11842563
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagt 434  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  11842601 ttatcataaatgcaaaataaaatatattgaattgagagt 11842563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 13026633 - 13026575
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||| |||| |||||||||||| | ||||  |||||||| |||||||||    
T  13026633 ttatcataaatgcataataaaatatattgaatcgagagtgatgaaagtaatattaatta 13026575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 15859388 - 15859450
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  ||||||||||||| | ||||||||||||| | |||||||| |||||||    
T  15859388 ataaatgcaaagtgaaatatattgaattagaagttgtgaaagtaatgttaattagagttataa 15859450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 37247926 - 37247992
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| | ||  |||||||| |||||||||| |||||||    
T  37247926 tatcataaatgcaaagtgaaatatattgaattgagtgtgatgaaagtaatattaattagagttataa 37247992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 43972016 - 43971942
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| |||||||||||||||| |||| | | |  | |||||||||||||||||||||||| | || ||||||||    
T  43972016 tactccctctgtttcaaaatgaatgtcgtctaaggtttttacacacatattaagaaatgcattaatcaaaagaaa 43971942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 6723891 - 6723979
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||| || |||||||||||  ||| || ||| ||||||||| |||||  |||||||  |||||||||| ||||||||| |||||||||    
T  6723891 gcattcctcattatcataaatataaagtagaatttattgaatt-ggagtgatgaaagttatattaattagagttataatttgaagaaaaa 6723979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 28527008 - 28526963
Alignment:
Q  418 tatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||| ||||||||||||| |||||||||  |||||||    
T  28527008 tatattgaattggaagttgtgaaagtaatattaattatagttataa 28526963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 44736765 - 44736712
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| | ||||  | ||||||||||||||||| |||||||||||||    
T  44736765 aatatattgaatcgagagtgataaaagtagtattaattagagttataattggaa 44736712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 5007609 - 5007653
Alignment:
Q  422 ttgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||| ||||||  ||||||||||||||||||| ||||||||||    
T  5007609 ttgaatcgggagtgatgaaagtagtattaattagagttataattg 5007653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 36396502 - 36396558
Alignment:
Q  399 tcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||||||||| ||||||||||| ||||   ||||||||||  ||||||||||||    
T  36396502 tcataaatgcaaagtataatatattaaattaaaagttgtgaaataagtattaattag 36396558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 40710653 - 40710573
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||| |||||||| ||||||| ||  ||||||||||||| ||||  ||||| ||| ||| || || ||||||||||    
T  40710653 gcattcttccttatcatacatgcaaagtagcatatattgaattgagagtgatgaaattagaattgatcagagttataattg 40710573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 43056441 - 43056405
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattggga 432  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  43056441 ttatcataaatgtaaagtataatatattgaattggga 43056405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 7e-35; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 24131432 - 24131515
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24131432 gcattcttctttatcataaatgcaaagtataatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaa 24131515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 29756174 - 29756263
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  29756174 gcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaaaa 29756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 2886247 - 2886164
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2886247 gcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaa 2886164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 46363443 - 46363532
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||    
T  46363443 gcattcttctttatcataaatgcaaagtaaaatatattgaattgagagtggtggaagtagtattaattattgttataattggaagaaaaa 46363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 26583804 - 26583721
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| || ||||||||||||||||||||||||    
T  26583804 gcattcttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaaatattattaattagtgttataattggaa 26583721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 387 - 469
Target Start/End: Original strand, 12267664 - 12267746
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  12267664 cattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaactagagttataattggaa 12267746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 27932865 - 27932954
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||    
T  27932865 gcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaggttgtattaattagtattataattggaagaaaaa 27932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 31798494 - 31798411
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||||||||||||| || |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  31798494 gcattattctttatcataaatgcaaagtagaatatattgaattgagagtagtgaaagtaatattaattagtgttataattggaa 31798411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 465
Target Start/End: Original strand, 10587614 - 10587692
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  10587614 cattcttcattatcataaatgcaaaatagaatatattgaattgagagtgatgaaagtagtattaattagtgttataatt 10587692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 19349036 - 19349109
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  19349036 ttatcataaatgcaaaatagaatatattgaattgagagttttgaaagtagtattaattagggttataattggaa 19349109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 37925278 - 37925358
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| |||||||||||||||||||| || |||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  37925278 gcatttttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataattg 37925358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 4466187 - 4466274
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||| ||||    
T  4466187 cattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtagtattaattagagttataattggaaaaaaa 4466274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 453
Target Start/End: Complemental strand, 51049584 - 51049517
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatt 453  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  51049584 gcattcttttttatcataaatgtaaagtataatatattgaattgggagttgtgaaagtagtattaatt 51049517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 33149347 - 33149269
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||  ||||||||||||||||||||||||| ||||    
T  33149347 attcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgttattattg 33149269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 2219480 - 2219557
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  2219480 gcattcttctttatcataaatgtaaagtaaaatatattgaattggaagttgtgaacgtagtattaattagagttataa 2219557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 29225819 - 29225746
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  29225819 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataattggaa 29225746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 482 - 550
Target Start/End: Complemental strand, 50249534 - 50249466
Alignment:
Q  482 ctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  50249534 ctctgtttcaaaatgagtgttgttttaggtctttacacacatattaagaaatgcaatgattaaaagaaa 50249466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 52382418 - 52382498
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || |||||||||||||| |||| ||||||||| |||||||||| ||||||||||    
T  52382418 gcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaattagagttataattg 52382498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 36232821 - 36232904
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||  ||| || ||||||||||||||| | | |||||||||||||||||||| |||||||||||||    
T  36232821 gcattcttctttatcataaatataaagtagaatatattgaattggaaatggtgaaagtagtattaattagagttataattggaa 36232904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 452
Target Start/End: Original strand, 40754445 - 40754511
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaat 452  Q
    |||||||||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||||    
T  40754445 gcattcttctttatcataaatgcaaagtagaatatattaaattgagagttgtgaaagtagtattaat 40754511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 398 - 475
Target Start/End: Original strand, 52146699 - 52146776
Alignment:
Q  398 atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||| || ||||| | |||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  52146699 atcataaatgcaaagtagaatatgtcgaattgagagttgtgaaagtagtattaattagagttataattgaaagaaaaa 52146776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 705381 - 705469
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| |||| || |||||| |||||||||| |||||| |||||| ||||    
T  705381 gcattcttctttatcatagatgtaaagtataatatattgaattgagagtggtaaaagtaatattaattagagttatatttggaaaaaaa 705469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 11425902 - 11425981
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||| ||| |||||||||||||||||||  ||||||||||    
T  11425902 cattcttctttatcataaatgtaaagtagaatatattgtattggaagtagtgaaagtagtattaattaaagttataattg 11425981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 27209999 - 27210082
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| |||  | |||||||||||||| |||| ||||||  |||||||||||| |||||||||||||    
T  27209999 gcattcttctttatcataaatgtaaaggagaatatattgaattgagagtggtgaaaagagtattaattagagttataattggaa 27210082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 26924152 - 26924210
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagta 444  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  26924152 gcattcttctttatcataaatgcaaagtataatatattgaattgagagtggtgaaagta 26924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 34047164 - 34047244
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||| |||||||||||| |||||  | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  34047164 gttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 34047244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 37541145 - 37541230
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtag--tattaattagtgttataattggaa 469  Q
    |||||||||||||| ||||||| ||| || ||||||||||||||| ||| ||||||||||  ||||||||| ||||||||||||||    
T  37541145 gcattcttctttattataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtatattaattaatgttataattggaa 37541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 52023905 - 52023984
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||| |||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  52023905 gttttaaaatgagtgtg-ttttagatctttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 52023984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 465
Target Start/End: Complemental strand, 50334009 - 50333932
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||||||| ||| || | |||||||||||| |||| ||||||||| |||||||||| |||||||||    
T  50334009 attcttctttatcataaatgtaaagtagagtatattgaattgagagtggtgaaagtattattaattagagttataatt 50333932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 14352642 - 14352562
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||| |||||  ||| || ||||||||||||||||||| ||||||||| |||||||||  ||||||||||    
T  14352642 gcattcttctttatcgtaaatataaagtagaatatattgaattgggagtggtgaaagtaatattaattacagttataattg 14352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 18186238 - 18186318
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||| ||||||||||||  ||  || |||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  18186238 gcattcttttttatcataaatataatgtaaaatatactgaattgggagtggtgaaagtagtattaattagagttataattg 18186318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 5115857 - 5115936
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||||||||| || ||| |||||||||||||| |||  ||||||||| |||||||||| | |||||||    
T  5115857 gcattcttctttatcataaatgtaatatagaatatattgaattgagagaggtgaaagtaatattaattagagctataatt 5115936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 16040152 - 16040073
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||| ||| ||||||||| ||||| |||| ||||||||||    
T  16040152 cattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtaatattatttagagttataattg 16040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 29225440 - 29225522
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||| ||||||||||||| ||| || ||||||||||||||| ||| |||||||||||||| ||| | |||||||||||||    
T  29225440 gcattcttttttatcataaatggaaagtagaatatattgaattggaagtggtgaaagtagtatt-atttgagttataattggaa 29225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 44580592 - 44580513
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||| || ||||||||||||||||| || |||||||| |||| ||||| ||||| ||| ||||||||||||||||||||    
T  44580592 gcatttttttttatcataaatgcaaagtagaatatattaaattaggagtggtgaatgtaatattaattagtgttataatt 44580513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 8327782 - 8327716
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||||| |||||||    
T  8327782 tatcataaatgcaaaatggaatatattgaattgagagtgatgaaagtagtattaattagagttataa 8327716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 548
Target Start/End: Complemental strand, 25487304 - 25487242
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaaga 548  Q
    ||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||| |||||    
T  25487304 gtttcaaaatgagtgtcgttttaggtctttacacgcatattaagaaatgcaatgattcaaaga 25487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 35622826 - 35622900
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||| || ||||||||||||||| | || ||||||||||||||||||| |||||||||| || |||||    
T  35622826 ataaatgcaaagtagaatatattgaattggcaattatgaaagtagtattaattagagttataattgaaaaaaaaa 35622900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 3718891 - 3718964
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| ||| ||||||||||||||||| ||||  |||| |||||||||||||| |||||| ||||||    
T  3718891 ttatcataaatgtaaagtataatatattgaattgagagtgatgaaggtagtattaattagagttatagttggaa 3718964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 14373344 - 14373409
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    |||| ||||||| |||| |||||  | |||||||||||||||||||||||||||||||||||||||    
T  14373344 gttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaaa 14373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 16451677 - 16451624
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  16451677 aatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaa 16451624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 16460830 - 16460777
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  16460830 aatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaa 16460777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 37495905 - 37495844
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    |||||||||||||| ||||||| ||| || ||||||||||||||||||| ||||||||||||    
T  37495905 gcattcttctttattataaatgtaaagtagaatatattgaattgggagtagtgaaagtagta 37495844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 460
Target Start/End: Complemental strand, 50086084 - 50086011
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgtta 460  Q
    ||||||||||||||||||||| ||| || ||||||||||||| || || |||||| ||||||||||||| ||||    
T  50086084 cattcttctttatcataaatgtaaagtagaatatattgaatttggtgtggtgaaaatagtattaattagagtta 50086011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 26352012 - 26352076
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| |||||||||||| |||||  | |||||||||||||||||||||||||| |||||||||||    
T  26352012 gttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaattattaaaagaaa 26352076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 30293556 - 30293492
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||| ||||||| |||||  | |||||||| |||||||||||||||||||||||||||||    
T  30293556 gtttcaaaacgagtgtcgttttaggtgtttacacatatattaagaaatgcaatgattaaaagaaa 30293492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 13500761 - 13500840
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||  ||||||||||||||| |  || ||||||||||||||||  |||||||||||||||||||  ||||||||    
T  13500761 gcattcttcactatcataaatgcaaagtggaaaatattgaattgggagtgctgaaagtagtattaattagaattataatt 13500840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 463
Target Start/End: Original strand, 51749225 - 51749292
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||| |||||||    
T  51749225 ttatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 51749292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 5442405 - 5442339
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| ||||||||||||| |||||||||  |||||||    
T  5442405 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattatagttataa 5442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 570
Target Start/End: Complemental strand, 27721303 - 27721211
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattattttatc 570  Q
    ||||| ||| |||| |||||||||||| || || || ||||| |||||||||| ||||||||| |||||||| |||||| |||||||||||||||    
T  27721303 tactccctccgttttaaaatgagtgtcgttgtagatgtttacgcacatattaaaaaatgcaataattaaaag-aaagag-aatgattattttatc 27721211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 27831912 - 27831838
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgt-tataattggaa 469  Q
    |||||||||||||||| |  || ||||||||||||||||  ||||||||||||||||||| || |||||||||||    
T  27831912 ttatcataaatgcaaagtggaagatattgaattgggagtgatgaaagtagtattaattagagtgtataattggaa 27831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 28839404 - 28839338
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||||  ||||||||||||||||||  |||||||    
T  28839404 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattatagttataa 28839338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 37281029 - 37281087
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagta 444  Q
    |||||||| ||||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  37281029 gcattcttttttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagta 37281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 38664466 - 38664400
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||  ||||||||||||| ||| |  ||||||||||||||||||| |||||||    
T  38664466 tatcataaatgcaaaattgaatatattgaattaggaatgatgaaagtagtattaattagagttataa 38664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 40061884 - 40061806
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||| ||| |||||||||||||||| || |||||||||||||| ||||  |||||||| ||||||||||  ||||||||    
T  40061884 catttttcattatcataaatgcaaattagaatatattgaattgagagtgatgaaagtaatattaattagaattataatt 40061806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 2571429 - 2571356
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||| || |||||||||||||| ||||  ||||||||||||||| ||| |||||| ||||||    
T  2571429 ttatcctaaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaactagagttatatttggaa 2571356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 475
Target Start/End: Original strand, 7075471 - 7075524
Alignment:
Q  422 ttgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| || |||||    
T  7075471 ttgaattcggagttgtgaaagtagtattaattagagttataattgaaaaaaaaa 7075524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 474
Target Start/End: Complemental strand, 26040720 - 26040629
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatat---aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||||||||||| ||| ||    |||||||||| |||| ||| ||| ||| |||||||||||| ||||||||||||| ||||    
T  26040720 gcattcttctttatcataaatgtaaagtactagaatatattgacttggaagtggtggaagcagtattaattagagttataattggaaaaaaa 26040629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 39125796 - 39125759
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39125796 tttacacacatattaagaaatgcaatgattaaaagaaa 39125759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 34032011 - 34032075
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| |||||||||||| |||||  | |||||| ||||||||| |||||||||||||||||||||    
T  34032011 gttttaaaatgagtgtcgttttaggtgtttacatacatattaaaaaatgcaatgattaaaagaaa 34032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 44257613 - 44257676
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||| ||||||| |||||  | |||||||||||||||| |||||||||||||||||||||    
T  44257613 gtttcaaaa-gagtgtcgttttaggtgtttacacacatattaataaatgcaatgattaaaagaaa 44257676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 12591018 - 12591077
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| ||||||| |||||| | ||||||||||| |||||| |||||||||||||||||||    
T  12591018 aaaacgagtgtcgttttaagtgtttacacacatgttaagatatgcaatgattaaaagaaa 12591077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 463
Target Start/End: Original strand, 17724760 - 17724823
Alignment:
Q  400 cataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||| || ||| |||||||||||||||  ||||| ||||||||||||| |||||||    
T  17724760 cataaatgcaaagtagaatttattgaattgggagtgatgaaaatagtattaattagagttataa 17724823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 46496084 - 46496017
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||| |  ||||||||||||| || ||  ||||||||||||||||||| |||||||    
T  46496084 ttatcataaatgcaaagtggaatatattgaattaggcgtgatgaaagtagtattaattagagttataa 46496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 3555598 - 3555664
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||    ||||||||||||||||||| |||||||    
T  3555598 tatcataaatgcaaagtggaatatattgaattgggatagatgaaagtagtattaattagagttataa 3555664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 5503496 - 5503438
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagta 444  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||| ||||  ||||||||    
T  5503496 gcattcttctttatcattaattcaaagtataatatattgaattgagagtgatgaaagta 5503438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 464
Target Start/End: Complemental strand, 17342904 - 17342826
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    ||||||| | ||||||||||| |||| |  |||||||||||||| ||||  | ||||||||||||||||| ||||||||    
T  17342904 gcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagtagtattaattagagttataat 17342826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 20988544 - 20988594
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||| |||||| || |||||||||| ||||||||||    
T  20988544 aatatattgaattgggagtggtgaaaataatattaattagagttataattg 20988594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 30903269 - 30903347
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||||| || |||||||||||   |||||  ||||| || |||||||||| ||||||||||||| ||||    
T  30903269 ttatcataaatgcaaagtagaatatattgaaacaggagtgatgaaaataatattaattagagttataattggaaaaaaa 30903347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 543
Target Start/End: Original strand, 44938490 - 44938560
Alignment:
Q  473 aaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgatta 543  Q
    |||||||  ||| ||||||||||||  ||| ||| | || |||||||||||||||||||||||||||||||    
T  44938490 aaatacttcctcagtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgcaatgatta 44938560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 475
Target Start/End: Complemental strand, 50926229 - 50926168
Alignment:
Q  413 tataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||| |||||||||||||| |||||| || |||||||||| ||||||||| |||||||||    
T  50926229 tataatacattgaattgggagtggtgaaaataatattaattagagttataatt-gaagaaaaa 50926168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 27721151 - 27721114
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||| |||||||||||||||||||||    
T  27721151 tttacacacatattaaaaaatgcaatgattaaaagaaa 27721114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 47293631 - 47293699
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    |||||||||||||||||||||  ||| || ||||||||||||| || || ||||| ||||||||||||||    
T  47293631 gcattcttctttatcataaatataaattagaatatattgaatt-ggcgtggtgaatgtagtattaattag 47293699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 50773396 - 50773449
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||| ||||||| | ||| ||||||||||||||| ||||||||||||    
T  50773396 aatatattgaactgggagtggagaatgtagtattaattagtcttataattggaa 50773449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 52146396 - 52146449
Alignment:
Q  398 atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaa 451  Q
    |||||||||||||| || ||||| | |||||| |||||||||||||||||||||    
T  52146396 atcataaatgcaaagtaaaatatgtcgaattgagagttgtgaaagtagtattaa 52146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 28706655 - 28706735
Alignment:
Q  386 gcattcttctttatcataaatgcaaaa-tataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||| |||||||||||||||| |||| || ||||||||||||| | |||  |||||||  |||||||||| |||||||||    
T  28706655 gcatttttctttatcataaatgtaaaaatagaatatattgaattagcagtgatgaaagttatattaattagagttataatt 28706735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 29568126 - 29568062
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||| |||| ||| |  | |||||||||||||||||||||||| | |||||||||||    
T  29568126 gtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaa 29568062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 34877132 - 34877200
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    |||||||||||||||| |  |||||||||||||| ||||  ||||| || |||||||||| ||||||||    
T  34877132 ttatcataaatgcaaagttgaatatattgaattgtgagtgatgaaaataatattaattagagttataat 34877200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 477
Target Start/End: Original strand, 25983660 - 25983751
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||| | |||||||||||||||||||| ||||| |||||||  ||||  ||||| || |||||||||  ||||||| || || |||||||    
T  25983660 gcattcatttttatcataaatgcaaaatagaatatgttgaatttagagtgatgaaattaatattaattaaagttataagtgaaaaaaaaata 25983751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 32587831 - 32587764
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||| |  |||||||||||||| ||||  ||||| || |||||||||| |||||||    
T  32587831 ttatcataaatgcaaagtgaaatatattgaattgagagtgatgaaattattattaattagagttataa 32587764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 455
Target Start/End: Complemental strand, 34813983 - 34813924
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    |||||||||||||||| || |||||||||||||| || |  ||||||||||||| |||||    
T  34813983 ttatcataaatgcaaagtagaatatattgaattgagaatgatgaaagtagtattcattag 34813924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 39420651 - 39420580
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| ||||||||||| || || || |||||||| || || |||||||||||||||||||  |||||||||    
T  39420651 tttattataaatgcaaagtaaaacatgttgaattgagaattatgaaagtagtattaattagatttataattg 39420580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 454
Target Start/End: Complemental strand, 45049075 - 45049040
Alignment:
Q  419 atattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||| |||||||||||||||||||||||||    
T  45049075 atattgaattaggagttgtgaaagtagtattaatta 45049040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 429
Target Start/End: Complemental strand, 45305929 - 45305886
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattg 429  Q
    ||||||||| |||||||||||||||| || ||||||||||||||    
T  45305929 gcattcttcattatcataaatgcaaagtagaatatattgaattg 45305886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 463
Target Start/End: Original strand, 45889290 - 45889357
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||| |  |||||||||||||  || |  ||||||||||||||||||| |||||||    
T  45889290 ttatcataaatgcaaagtggaatatattgaattatgaatgatgaaagtagtattaattagagttataa 45889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 550
Target Start/End: Original strand, 12484549 - 12484623
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||||||| |||||||| || | ||| |  | ||||||||||||||||||||| ||| ||||||||||||    
T  12484549 tactccctctgttacaaaatgaatgccgtttaaggtttttacacacatattaagaaatacaaagattaaaagaaa 12484623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 550
Target Start/End: Original strand, 26594980 - 26595054
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||| |||||||||||| |||| ||| |  | ||||||||||||||||||||| || | |||||||||||    
T  26594980 tactccctccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatacattaattaaaagaaa 26595054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 26606169 - 26606211
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaatt 428  Q
    ||||||||| |||||||||||||||| || |||||||||||||    
T  26606169 gcattcttcattatcataaatgcaaattaaaatatattgaatt 26606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 538
Target Start/End: Original strand, 28410729 - 28410791
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaat 538  Q
    ||||| ||| |||||||||||| |||| ||| || |  |||||||||||||||||||||||||    
T  28410729 tactccctccgtttcaaaatgaatgtcgtttaaagttgttacacacatattaagaaatgcaat 28410791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 36784379 - 36784313
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||| | |||||||||| || |||||||||  |||||||    
T  36784379 tatcataaatgcaaagtgaaatatattgaatttgaagttgtgaaaataatattaattatagttataa 36784313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 14625 - 14662
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  14625 tttacacacatattaaaaaatgcaatgattagaagaaa 14662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 8989587 - 8989624
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||||||||||| | |||||||||||    
T  8989587 tttacacacatattaagaaatgcattaattaaaagaaa 8989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 15290545 - 15290480
Alignment:
Q  410 aaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||| || |||  |||||||| |||||||||  |||||||||| || |||||    
T  15290545 aaatataatatattgaatgggaagtgatgaaagtattattaattatagttataattgaaaaaaaaa 15290480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 50267470 - 50267539
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||| | |||||||||||| ||| |  ||||||||||||||||| |  |||||||| ||||||||||    
T  50267470 gcattctccattatcataaatgtaaagtgaaatatattgaattgggaatgatgaaagtaatattaattag 50267539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 8894936 - 8895000
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| |||||||||||| ||| | || |||| | ||||||||||||||||| | |||||||||||    
T  8894936 gttttaaaatgagtgtcgtttaagatttttatatacatattaagaaatgcattaattaaaagaaa 8895000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 546
Target Start/End: Original strand, 14593308 - 14593336
Alignment:
Q  518 acacatattaagaaatgcaatgattaaaa 546  Q
    |||||||||||||||||||||||||||||    
T  14593308 acacatattaagaaatgcaatgattaaaa 14593336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 18794463 - 18794527
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| ||||||| |||| ||| | || |||||||||||||||| ||||||| | |||||||||||    
T  18794463 gttttaaaatgaatgtcgtttaatatttttacacacatattaataaatgcattaattaaaagaaa 18794527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 454
Target Start/End: Original strand, 21304838 - 21304906
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||  |||| |||||| || || ||||||    
T  21304838 gcatttttctttatcataaatataaagtataatatattgaattaagagtggtgaaaatattaataatta 21304906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 447
Target Start/End: Original strand, 27142956 - 27143015
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    ||||||||||||| ||||||| ||| || ||||||||||| || |||| ||||||||||||    
T  27142956 cattcttctttatgataaatgtaaagtaaaatatattgaa-tgagagtggtgaaagtagta 27143015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 15371894 - 15371977
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15371894 gcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaa 15371977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 33017975 - 33018064
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  33017975 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataattggaaaaaaaa 33018064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 387 - 469
Target Start/End: Original strand, 33921501 - 33921583
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  33921501 cattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtaaaagtagtattaattagagttataattggaa 33921583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 4552985 - 4552896
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  4552985 gcattcttctttatcataaatgcaaattagaatatattaaattgggagtggtgaaagtaatattaattagtgttataattgaaaggaaaa 4552896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 2310319 - 2310399
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  2310319 gcattcttctttatcataaatgcaaggtataatatattgaattgggagtgatgaaagtagtattaattaatgttataattg 2310399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 34803749 - 34803818
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  34803749 tatcataaatgcaaaataaaatatattgaattgagagttgtgaaagtagtattaattatagttataattg 34803818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 15321259 - 15321335
Alignment:
Q  389 ttcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||||||||||| || |||||||||||||| || |  |||||||||||||||||||||||||||||    
T  15321259 ttcttctttatcataaatgcaaagtagaatatattgaattgagaatgttgaaagtagtattaattagtgttataatt 15321335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 15351417 - 15351494
Alignment:
Q  389 ttcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||||||  || |||||||||||||| |||  |||||||||||||||||||||||| ||||||    
T  15351417 ttcttctttatcataaatgcaaggtagaatatattgaattgagagcggtgaaagtagtattaattagtgttgtaattg 15351494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 4850428 - 4850492
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  4850428 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 4850492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 15325220 - 15325140
Alignment:
Q  389 ttcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| |||||||||| || ||||||||| |||| |||| |||||| |||||||||||||| ||||||||||||    
T  15325220 ttcttctttatcgtaaatgcaaagtagaatatattggattgagagtggtgaaactagtattaattagtattataattggaa 15325140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 476 - 568
Target Start/End: Complemental strand, 32429517 - 32429427
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||| ||| ||||||||||||||||  |||||  | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  32429517 tactccctccgtttcaaaatgagtgttgttttaggtgtttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 32429427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 8232342 - 8232424
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || |||||||||||||| || ||||||||||| ||||||||||  ||||||||||||    
T  8232342 gcattcttctttatcataaatgtaaagta-aatatattgaattgagacttgtgaaagtactattaattagaattataattggaa 8232424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 29400175 - 29400101
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||| |||| |||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  29400175 tactccctccgttttaaaatgtgtgttgttttagatctttacacacatattaagaaatgcaatgattaaaagaaa 29400101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 469
Target Start/End: Original strand, 3166145 - 3166222
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||| ||| || ||||||||||||  ||| | |||||||||||||||||||| |||||||||||||    
T  3166145 ttctttatcataaatgtaaagtagaatatattgaatgaggattggtgaaagtagtattaattagagttataattggaa 3166222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 9354472 - 9354554
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatata---ttgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||||| | | || ||||||   ||||||| |||||||||||||||||||||||||| ||||||||||    
T  9354472 cattcttctttatcataaatgtagagtagaatatactattgaattaggagttgtgaaagtagtattaattagagttataattg 9354554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 450
Target Start/End: Original strand, 31075965 - 31076019
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtatta 450  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  31075965 ttatcataaatacaaaatataatatattgaattgggagtgatgaaagtagtatta 31076019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 550
Target Start/End: Original strand, 13011260 - 13011334
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||||||||||||||||  ||| ||| | || |||||||||||||||||||||||| | |||||||||||    
T  13011260 tactccctctgtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaa 13011334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 31265844 - 31265778
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| |  ||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  31265844 tatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 31265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 3604647 - 3604708
Alignment:
Q  402 taaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||| |  ||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  3604647 taaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 3604708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 19689543 - 19689486
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||| |||||||| ||||||||  |||||| |||||||||||||||||||||    
T  19689543 aaaatgagtgtcgttttaaatttttacaca--tattaaaaaatgcaatgattaaaagaaa 19689486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 568
Target Start/End: Original strand, 13503765 - 13503846
Alignment:
Q  485 tgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||||| | |||| ||| | || |||||||||||||||||||||||| | |||||||| ||||||||||| ||||||||    
T  13503765 tgtttcaaaataaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaag-aaagagaaatg-ttatttta 13503846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 30063995 - 30064057
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  |||||||||||||||||||  |||||||| |||||||||| |||||||    
T  30063995 ataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 30064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 15355651 - 15355590
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    ||||||||||||||||||||| |||| || |||||| ||||||| ||||  |||||||||||    
T  15355651 gcattcttctttatcataaatccaaagtagaatataatgaattgagagtgttgaaagtagta 15355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 450
Target Start/End: Original strand, 3874081 - 3874145
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtatta 450  Q
    ||||| |||||||||||||||| ||| |  ||||||||||||| ||||| ||||||||| |||||    
T  3874081 gcattattctttatcataaatgtaaagttgaatatattgaattaggagtagtgaaagtaatatta 3874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 550
Target Start/End: Original strand, 3988655 - 3988730
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||| |||||||| ||||||| |||| ||| | || |||||||||||||| |||||||| || |||||||||||    
T  3988655 aatactccctctgttttaaaatgaatgtcgtttaagatttttacacacatattgagaaatgc-ataattaaaagaaa 3988730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 21271315 - 21271375
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgca 536  Q
    ||||| |||||||||||||||| |||| ||| |  | ||||||||||||||||||||||||    
T  21271315 tactccctctgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgca 21271375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 15081469 - 15081422
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| | || ||||||||||||||||||| |||||||    
T  15081469 aatatattgaattggaaattatgaaagtagtattaattagagttataa 15081422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 8569787 - 8569853
Alignment:
Q  403 aaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||| |||||||||| | |||||||||||    
T  8569787 aaatgcaaagtgaaatatattaaattgagagtggtgaaagtaatattaattagagctataattggaa 8569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 430
Target Start/End: Complemental strand, 16126277 - 16126243
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgg 430  Q
    |||||||||||||||| ||||||||||||||||||    
T  16126277 ttatcataaatgcaaagtataatatattgaattgg 16126243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 26356333 - 26356267
Alignment:
Q  398 atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    |||||||||||||| |  ||||||||||||| | |||  ||||||||||||||||||  ||||||||    
T  26356333 atcataaatgcaaagtgaaatatattgaattagaagtgatgaaagtagtattaattaaagttataat 26356267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 550
Target Start/End: Original strand, 31233534 - 31233608
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| |||||||||||||||| | || ||| |  | ||||||||||||||||||||| || | |||||||||||    
T  31233534 tactcactctgtttcaaaatgaatatcttttaaggtttttacacacatattaagaaatacattaattaaaagaaa 31233608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 33109419 - 33109361
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||| || |  ||||||||||||||||||| ||||||| ||||| ||||    
T  33109419 aatatattgaattgagaatgatgaaagtagtattaattagagttataaatggaaaaaaa 33109361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 28539068 - 28538983
Alignment:
Q  390 tcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||| |||| ||||||||||| || |||||||| ||||   |||  ||||||| ||||||||||| |||||||||| || |||||    
T  28539068 tcttccttattataaatgcaaagtagaatatattaaattaaaagtgatgaaagtggtattaattagagttataattgaaaaaaaaa 28538983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 454
Target Start/End: Complemental strand, 117143 - 117087
Alignment:
Q  398 atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||||| |||| |  |||||||||||||| ||||  ||||||||||||||||||    
T  117143 atcataaatacaaagtggaatatattgaattgagagtgatgaaagtagtattaatta 117087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 17552169 - 17552233
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||| |||| |||||| | |||||||||| ||||| |||| || | |||||||||||    
T  17552169 gtttcaaaatgaatgtcgttttaagtttttacacacagattaaaaaatacattaattaaaagaaa 17552233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 1923166 - 1923083
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1923166 gcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaa 1923083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 53051102 - 53051020
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgga 468  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53051102 gcattcttgtttatcataaatgtaaagtataatatattgaattgggagttgtgaaagtagtattaattagagttataattgga 53051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 46194244 - 46194320
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  46194244 tctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaa 46194320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 1334812 - 1334889
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1334812 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataa 1334889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 48409658 - 48409577
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||| ||| || ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  48409658 attcttctttatcataaatgtaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagagttataattggaa 48409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 477
Target Start/End: Original strand, 32977821 - 32977911
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    ||||| |||||||||||||||| ||  || |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  32977821 gcatttttctttatcataaatgtaatttagaatatattgaattgagagttgtgaaagtagtattaattagagttataattgg-agaaaaata 32977911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 387 - 467
Target Start/End: Original strand, 21585442 - 21585522
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgg 467  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||| ||| ||||||||| |||||||||| |||||||||||    
T  21585442 cattcttctttatcataaatgtaaaatagaatatattgtattggaagtggtgaaagtaatattaattagagttataattgg 21585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 29858897 - 29858984
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||||||||||||||| ||| || |||||||||||||  |||| ||||||||||||||||||||  |||||||||||| ||||    
T  29858897 cattcttctttatcataaatgtaaagtagaatatattgaattatgagtggtgaaagtagtattaattagaattataattggaaaaaaa 29858984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 38600837 - 38600920
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||  ||||||||||||||||||| ||||||| |||||    
T  38600837 gcattcttctttaccataaatgtaaagtataatatattgaactgggagtgatgaaagtagtattaattagagttataaatggaa 38600920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 41287338 - 41287255
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| ||||||||||| || |||||||||| |||||||||||||    
T  41287338 gcattattctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaattaatattaattagagttataattggaa 41287255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 21296545 - 21296611
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  21296545 tatcataaatgcaaagtagaatatattgaattggaagttgtgaaagtagtattaattagagttataa 21296611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 44064385 - 44064465
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  44064385 gtttcaaaatgagtgtctttttaggtttttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 44064465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 42547137 - 42547225
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||  ||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||| | ||||||| ||| ||||    
T  42547137 gcattctttcttatcataaatgcaaaagagaatatattgaattgggagtgatgaaagtagtattaattagagctataatttgaataaaa 42547225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 476 - 548
Target Start/End: Original strand, 42571449 - 42571521
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaaga 548  Q
    ||||| ||| ||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||    
T  42571449 tactccctccgtttcaaaatgagtgccgttttaggtctttacacacatattaagaaatgcaatgattaaaaga 42571521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 39329781 - 39329864
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||  |||||||||||||||| || |||||||||||||| ||||  |||||||||||||||||||  ||||||||||||    
T  39329781 gcattctttcttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaattagaattataattggaa 39329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 477
Target Start/End: Original strand, 53754095 - 53754186
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||||||||||||||||||| ||| || |||||||||||||  || | || ||||||||||||||||| |||||||||| || |||||||    
T  53754095 gcattcttctttatcataaatgtaaagtagaatatattgaattaagaatagtaaaagtagtattaattagagttataattgaaaaaaaaata 53754186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 43639558 - 43639624
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  43639558 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattaattagagttataa 43639624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 51165028 - 51164950
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta-ttaattagtgttataa 463  Q
    |||||||||||||||||||||| ||| || ||||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  51165028 gcattcttctttatcataaatgtaaagtagaatatattgaatttggagtagtgaaagtagtacttaattagagttataa 51164950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 54021489 - 54021558
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    |||||||||||||| ||||||| ||| || ||||||||||||| ||||| ||||||||||||||||||||    
T  54021489 gcattcttctttattataaatgtaaagtagaatatattgaattcggagtggtgaaagtagtattaattag 54021558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 9218221 - 9218138
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||  |||||||||||||||| || |||||| ||||||| ||||  ||||||||||||||||||| ||||||| |||||    
T  9218221 gcattctttcttatcataaatgcaaagtagaatataatgaattgagagtgatgaaagtagtattaattagagttataaatggaa 9218138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 50038099 - 50038181
Alignment:
Q  483 tctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||| ||||| |||||| |||||  | ||||||||||||||||||||||||||||||||||||| ||   |||||||||||||    
T  50038099 tctgttttaaaataagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaagag---aatgattatttta 50038181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 54122266 - 54122332
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  54122266 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattgattagagttataa 54122332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 44219074 - 44219147
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||| |||| || ||||||||||||||| |||  ||||| ||||||||||||| |||||||||||||    
T  44219074 ttatcataaatacaaagtagaatatattgaattggaagtaatgaaaatagtattaattagagttataattggaa 44219147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 47496242 - 47496166
Alignment:
Q  389 ttcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||| ||||||||||||| ||| | ||||||||||||||  ||||  ||||||||||||||||||| |||||||||    
T  47496242 ttcttttttatcataaatgtaaagtctaatatattgaattaagagtgatgaaagtagtattaattagagttataatt 47496166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 550
Target Start/End: Complemental strand, 42886980 - 42886905
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||| ||| |||| |||||||||||| |||||  | |||||| |||||||||||| ||||||||||||||||||    
T  42886980 atactccctccgttttaaaatgagtgtcgttttaggtgtttacaaacatattaagaactgcaatgattaaaagaaa 42886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 3862213 - 3862283
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| || |||||| ||||||| ||||  |||||||| |||||||||| ||||||||||    
T  3862213 ttatcataaatgcaaattaaaatatactgaattgagagtgatgaaagtaatattaattagagttataattg 3862283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 15280670 - 15280604
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| |  |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  15280670 tatcataaatggaaagtggaatatattgaattgggagtgatgaaagtagtattaattagggttataa 15280604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 26134745 - 26134811
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||||  ||||||||||| ||||||| |||||||    
T  26134745 tatcataaatgcaaagtgaaatatattgaattgggagtgatgaaagtagtactaattagagttataa 26134811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 50736147 - 50736094
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||    
T  50736147 aatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaa 50736094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 50776708 - 50776761
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||    
T  50776708 aatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaa 50776761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 550
Target Start/End: Complemental strand, 4759522 - 4759446
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||| |||  ||| |||||||||||| |||||  | |||| ||||||||||||||| |||||||||||||||||    
T  4759522 aatactccctccattttaaaatgagtgtcgttttaggtgtttatacacatattaagaaaagcaatgattaaaagaaa 4759446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 50150411 - 50150487
Alignment:
Q  399 tcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||| ||| || |||||||| |||||||||| |||||| || ||||||||||  |||||||||||| |||||    
T  50150411 tcataaatgtaaattaaaatatattaaattgggagtggtgaaaataatattaattagaattataattggaaaaaaaa 50150487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 30261542 - 30261612
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaatt-gggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||| ||| |  ||||||||||||| ||||||  ||||||||||||||||||| |||||||||    
T  30261542 ttatcataaatgtaaagtggaatatattgaatttgggagtgatgaaagtagtattaattagagttataatt 30261612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 54845558 - 54845624
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||| | |||  ||||||||||||||||||| |||||||    
T  54845558 tatcataaatgcaaagtggaatatattgaattagaagtaatgaaagtagtattaattagagttataa 54845624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 19115574 - 19115541
Alignment:
Q  518 acacatattaagaaatgcaatgattaaaagaaaa 551  Q
    ||||||||||||||||||||||||||||||||||    
T  19115574 acacatattaagaaatgcaatgattaaaagaaaa 19115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 550
Target Start/End: Complemental strand, 22857295 - 22857222
Alignment:
Q  477 actctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| || |||||||||| | |||||||| || | |||||||||||||||| ||||||| | |||||||||||    
T  22857295 actctatccgtttcaaaataaatgtcatttaaagtttttacacacatattaaaaaatgcattaattaaaagaaa 22857222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 27668368 - 27668437
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||| |  |||||||||||||  ||||  | ||||||||||||||||| |||||||||    
T  27668368 ttatcataaatgcaaagtgaaatatattgaattaagagtgataaaagtagtattaattagagttataatt 27668437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 52325242 - 52325173
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||| |  |||||||||||||| || |   |||||||||||||||||| ||||||||||    
T  52325242 tatcataaatgcaaagtggaatatattgaattgagaatgacgaaagtagtattaattagagttataattg 52325173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 47684810 - 47684766
Alignment:
Q  419 atattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||    
T  47684810 atattgaattgggagtgatgaaagtagtattaattagagttataa 47684766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 11337543 - 11337606
Alignment:
Q  487 tttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||| |||| ||| |  | ||||||||||||||| ||||||||||||||| ||||||    
T  11337543 tttcaaaatgaatgtcgtttaaggtttttacacacatattatgaaatgcaatgattagaagaaa 11337606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 37041934 - 37041993
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||||||| | |  ||||||||||||||||||| |||||||||| || |||||    
T  37041934 aatatattgaattggaaatgatgaaagtagtattaattagagttataattgaaaaaaaaa 37041993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 45746428 - 45746353
Alignment:
Q  400 cataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||| || ||||||| || ||  ||||  ||||||||||||||||||| |||||||||| || |||||    
T  45746428 cataaatgcaaagtagaatatatggagttaagagtgatgaaagtagtattaattagagttataattgaaaaaaaaa 45746353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 550
Target Start/End: Complemental strand, 3986092 - 3986017
Alignment:
Q  473 aaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||  || |||||||||||| |||| ||| |  | |||||||||||  |||||||||||||||||||||||||    
T  3986092 aaatactccttcagtttcaaaatgaatgtcgtttaaggtttttacacacat--taagaaatgcaatgattaaaagaaa 3986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 5245477 - 5245411
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||| |||| |  |||||||||||||| ||||  ||||||| ||||||||||| |||||||    
T  5245477 tatcataaatacaaagtggaatatattgaattgagagtgatgaaagtggtattaattagagttataa 5245411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 26832133 - 26832071
Alignment:
Q  400 cataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttata 462  Q
    |||||||||||| |  |||||||| |||||| |||  ||||||||||||||||||| ||||||    
T  26832133 cataaatgcaaagtgaaatatattaaattggtagtgatgaaagtagtattaattagagttata 26832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 32023147 - 32023209
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  |||||||||||||| ||||  |||||||| |||||||||| |||||||    
T  32023147 ataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataa 32023209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 39866595 - 39866661
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||| ||||||||| ||||  ||||||| ||||||||||| |||||||    
T  39866595 tatcataaatgcaaagtgaaatacattgaattgtgagtgatgaaagtggtattaattagagttataa 39866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 46627966 - 46628024
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||| ||||||||||||||| | || |  | ||||||||||||||||    
T  46627966 ttatcataaatgcaaagtataatatattgaatagagaatgataaaagtagtattaatta 46628024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 46786023 - 46786077
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaa 451  Q
    ||||||||||||||| |  ||||||||||||||||||   |||||||||||||||    
T  46786023 tatcataaatgcaaagtgaaatatattgaattgggagcgatgaaagtagtattaa 46786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 7885803 - 7885750
Alignment:
Q  402 taaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    |||||||||| ||||||| ||||||||| ||||  ||||||| |||||||||||    
T  7885803 taaatgcaaagtataatacattgaattgagagtgatgaaagttgtattaattag 7885750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 15082078 - 15082002
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||| | |||||||||| |||||||  |||||||| ||||| ||||  ||||| ||||||||||||| |||||||    
T  15082078 gcattctccattatcataaaagcaaaatgaaatatattaaattgagagtgatgaaa-tagtattaattagagttataa 15082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 25363525 - 25363562
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  25363525 tttactcacatattaagaaatacaatgattaaaagaaa 25363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 48901937 - 48901873
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| |||||||||||| ||| |  | |||||| ||||||||||||||||| | |||||||||||    
T  48901937 gttttaaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaattaaaagaaa 48901873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 50646061 - 50646125
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| |||||||||||| ||| | || |||||||||||||||| ||||| | | |||||||||||    
T  50646061 gttttaaaatgagtgtcgtttaagatttttacacacatattaaaaaatgtattaattaaaagaaa 50646125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 538
Target Start/End: Original strand, 51057679 - 51057731
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaat 538  Q
    |||| |||||||||||| ||||| ||  |||||| ||||||||||||||||||    
T  51057679 gttttaaaatgagtgtcgttttagattgttacacgcatattaagaaatgcaat 51057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 14690036 - 14689953
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14690036 gcattcttttttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaa 14689953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 28791384 - 28791302
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgga 468  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28791384 gcattcttctttatcataaatgtaaactagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgga 28791302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 14748737 - 14748825
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||||||||||||||| || |||||||||||||| || | |||||||||||||||||||||||||||||||||| ||||    
T  14748737 gcattcttctttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtattaattagtgttataattggaaaaaaa 14748825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 41726597 - 41726517
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  41726597 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaattagtattaattacagttataattg 41726517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 45420970 - 45421054
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtg-aaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || ||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||    
T  45420970 gcattcttctttatcataaatgcaaagtaaaatatattgaatcaggagtggtgaaaagtagtattaattagtgttataattggaa 45421054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 2195544 - 2195461
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  2195544 gcattctttcttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataattggaa 2195461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 396147 - 396227
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  396147 gtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 396227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 464
Target Start/End: Original strand, 41759661 - 41759739
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  41759661 gcattcttctttatcataaatacaaagtaaaatatattgaattgggagtagtgaaagtaatattaattaatgttataat 41759739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 7258408 - 7258481
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  7258408 ttatcataaatgcaaactagaatatattgaattgggagtgatgaaagtagtattaattagagttataattggaa 7258481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 15160379 - 15160443
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  15160379 gtttcaaaatgagtgtcattttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 15160443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 40077781 - 40077861
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  40077781 gcattcttctttatcataaatgtaaagtagaatatattgaatttggagttgtgaaagtaatattaatttgagttataattg 40077861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 477
Target Start/End: Complemental strand, 2797116 - 2797025
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||  |||||||| |||||||||| ||||||||||| | |||||||    
T  2797116 gcattcttacttatcataaatgcaaagtagaatatattgaattgggagtaatgaaagtaatattaattagagttataattggtaaaaaaata 2797025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 29638376 - 29638297
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||| |||||||||||||||| ||| |||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  29638376 cattattctttatcataaatgtaaagtataatatattgaattaggagtggtgaaagtaatattaattagagttataattg 29638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 8618204 - 8618122
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgga 468  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||| || ||| ||||||||||||  ||||||||||||    
T  8618204 gcattattctttatcataaatgtaaaatataatatattgaattggaagtggtaaaaatagtattaattaaagttataattgga 8618122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 32231768 - 32231834
Alignment:
Q  403 aaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32231768 aaatgcaaagtaaaatatattgaattgggagtggtgaaagtattattaattagtgttataattggaa 32231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 465
Target Start/End: Complemental strand, 37459424 - 37459347
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||||||||||| |  |||||||| |||||||||| ||||||||||||| ||||||| ||||||||    
T  37459424 attcttctttatcataaatgcaaagttgaatatattaaattgggagtggtgaaagtagtatcaattagtattataatt 37459347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 32679111 - 32679031
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| |||||||||||||||| ||| || |||||||| ||||| ||||||| ||||||||||||||||| ||||||||||    
T  32679111 gcattattctttatcataaatgtaaagtaaaatatattaaattgagagttgtaaaagtagtattaattagagttataattg 32679031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 454
Target Start/End: Complemental strand, 39998239 - 39998171
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||||||||    
T  39998239 gcattcttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaatta 39998171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 14117536 - 14117449
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||| ||| |  ||||||||||||||  ||||||||||||| |||||||||| |||||||||| || |||||    
T  14117536 attcttctttatcataaatgtaaagttgaatatattgaattgaaagttgtgaaagtaatattaattagagttataattgaaaaaaaaa 14117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 25174616 - 25174699
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||| ||||||||||| || |||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||    
T  25174616 gcattattctttattataaatgcaaagtagaatatattgaattgagagtagggaaagtaatattaattagtgttatagttggaa 25174699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 475 - 550
Target Start/End: Original strand, 39765782 - 39765857
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||| ||| ||||||||||||||||| |||||  | ||||||||||||||||||||| ||||||||||||||||    
T  39765782 atactccctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatacaatgattaaaagaaa 39765857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 42412414 - 42412497
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||| | |||||||||||||||| |  |||||||||||||||||||  ||||||||||||||||||| | |||||||||||    
T  42412414 gcattctccattatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagctataattggaa 42412497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 886479 - 886559
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||||||| || ||||||| |||||| || |  | |||||| |||||||||||||||||||||    
T  886479 gcattcttctttatcataaatgcaaagtagaatatatcgaattgagaatgataaaagtaatattaattagtgttataattg 886559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 1494279 - 1494356
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||||||||||||| || ||||||||  ||| | ||| ||||||||| ||||||||||||||||||||    
T  1494279 gcattcttctttatcataaatgcaaagtagaatatatt--attagaagtagtgaaagtaatattaattagtgttataatt 1494356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 467
Target Start/End: Original strand, 2875118 - 2875198
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgg 467  Q
    |||||||| |||||||||||||||| || |||||||||||||  |||   ||||||||||||||||||| |||||||||||    
T  2875118 cattcttccttatcataaatgcaaagtagaatatattgaatttagaggaatgaaagtagtattaattagagttataattgg 2875198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 8418333 - 8418413
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| |||||||||||||||| ||| || |||||| ||||||| ||||  ||||||||||||||||||| ||||||||||    
T  8418333 gcattattctttatcataaatgtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagttataattg 8418413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 10728953 - 10729036
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||  |||||||||||||||| |  |||||||||||||||||||  | ||||||||||||||||| |||| ||||||||    
T  10728953 gcattctttcttatcataaatgcaaagtggaatatattgaattgggagtgattaaagtagtattaattagagttacaattggaa 10729036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 387 - 454
Target Start/End: Complemental strand, 11637215 - 11637148
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||| |||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||||||||    
T  11637215 cattattctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaatta 11637148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 477
Target Start/End: Complemental strand, 33743852 - 33743761
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    ||||||||||||||||||||| |||| || |||||||| ||||| ||||  |||||||| |||||||||||| || ||| |||| |||||||    
T  33743852 gcattcttctttatcataaatacaaagtagaatatattaaattgtgagtgatgaaagtaatattaattagtggtaaaataggaaaaaaaata 33743761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 5392114 - 5392048
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  5392114 tatcataaatgcaaagtggaatatattgaattgggagtgttgaaagtagtattaattagagttataa 5392048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 43724602 - 43724522
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||||||||||| ||||| || ||||||||| || ||| |||||||||||||||||| |||||| |||||||||||||    
T  43724602 gtttcaaaatgagtgtcgttttagatgtttacacacgtactaaaaaatgcaatgattaaaag-aaagag-aatgattatttta 43724522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 472
Target Start/End: Complemental strand, 17006014 - 17005938
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaa 472  Q
    ||||||||||||||||||| || |||||||||||||||||||  ||||   |||||||||||| ||||||||| ||||||    
T  17006014 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaa---agtattaattagagttataatttgaagaa 17005938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 472
Target Start/End: Original strand, 17571234 - 17571310
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaa 472  Q
    ||||||||||||||||||| || |||||||||||||||||||  ||||   |||||||||||| ||||||||| ||||||    
T  17571234 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaa---agtattaattagagttataatttgaagaa 17571310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 27987724 - 27987655
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||||  |||||||||    
T  27987724 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 27987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 28045026 - 28044957
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||||  |||||||||    
T  28045026 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 28044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 32241455 - 32241532
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||  ||||||||||||||| |  |||||| |||||||| ||||||||||||| |||||||||| |||||||    
T  32241455 gcattcttcactatcataaatgcaaagtggaatataatgaattggaagttgtgaaagtaatattaattagagttataa 32241532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 38201422 - 38201499
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||| | ||||||||||||||||| || | |||||||||||||||||  |||||||| |||||||||| |||||||    
T  38201422 gcattcatttttatcataaatgcaaattagagtatattgaattgggagtaatgaaagtaatattaattagagttataa 38201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 475
Target Start/End: Original strand, 43844918 - 43845002
Alignment:
Q  390 tcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||| ||| || |||||| | |||||| |||||| ||||||| ||||||||| ||||||||||||| |||||    
T  43844918 tcttctttatcataaatgtaaagtaaaatataattaattgg-agttgttaaagtagaattaattagagttataattggaaaaaaaa 43845002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 15559171 - 15559239
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    |||||||||||||||| || ||||||||||||| |||||  ||||||| ||||||||||| ||||||||    
T  15559171 ttatcataaatgcaaagtagaatatattgaattaggagtgatgaaagtggtattaattagagttataat 15559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 550
Target Start/End: Original strand, 40399785 - 40399864
Alignment:
Q  471 aaaaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||| |||||||||||||||| | |||| ||| || | |||||||| ||||||||||||||| | |||||||||||    
T  40399785 aaaaataccctctctgtttcaaaataaatgtcgtttaaagtttttacacatatattaagaaatgcattaattaaaagaaa 40399864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 31132795 - 31132729
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||  |||||| | |||||  |||||||||||||||||||||||| |||||||    
T  31132795 tatcataaatgcaaaatggaatataatcaattgaaagttgtgaaagtagtattaattagagttataa 31132729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 33190951 - 33191017
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||| | |  ||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  33190951 tatcataaatgcatagtggaatatattgaattggaagttgtgaaagtagtactaattagagttataa 33191017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 33925130 - 33925192
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  ||||||||||||||  |||||||||||||||||||||||| |||||||    
T  33925130 ataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 33925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 44790464 - 44790530
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| |  ||||||||||||||||| | |||||||||||||||||||| |||||||    
T  44790464 tatcataaatgtaaagtggaatatattgaattgggaatggtgaaagtagtattaattagagttataa 44790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 8394286 - 8394347
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    ||||| ||||||||||||||| |||| || |||||||||||||| |||| ||||||||||||    
T  8394286 gcattattctttatcataaatacaaagtaaaatatattgaattgagagtggtgaaagtagta 8394347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 487 - 548
Target Start/End: Complemental strand, 12339941 - 12339880
Alignment:
Q  487 tttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaaga 548  Q
    ||||||||||| |||| ||| |  | ||||||||||||||||||||||||||||||||||||    
T  12339941 tttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcaatgattaaaaga 12339880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 473
Target Start/End: Original strand, 27973727 - 27973804
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaa 473  Q
    |||||||||||||||| || |||| |||||||||||| |   |||| ||||||||||||| |||||||||| ||||||    
T  27973727 ttatcataaatgcaaagtagaatacattgaattgggaataacgaaaatagtattaattagggttataattgaaagaaa 27973804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 473
Target Start/End: Original strand, 28030996 - 28031073
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaa 473  Q
    |||||||||||||||| || |||| |||||||||||| |   |||| ||||||||||||| |||||||||| ||||||    
T  28030996 ttatcataaatgcaaagtagaatacattgaattgggaataacgaaaatagtattaattagggttataattgaaagaaa 28031073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 29451415 - 29451334
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    ||||||||||| |||| ||||||||||||||||| | ||  ||||||||||| |||||||  |||||||| ||| |||||||    
T  29451415 ttatcataaatccaaagtataatatattgaattgagggtgatgaaagtagtactaattagatttataattagaaaaaaaata 29451334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 491 - 568
Target Start/End: Original strand, 37559471 - 37559546
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||| ||| || ||||| || ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  37559471 aaaataagtatcgttttagatgtttacacacatattaagaaatgcaatgattaaaa-taaagag-aatgattatttta 37559546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 24245130 - 24245197
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgatta 543  Q
    ||||| ||| |||||||||||| |||| ||| | || ||||||||||||||||||||| |||||||||    
T  24245130 tactccctccgtttcaaaatgaatgtcgtttaagatttttacacacatattaagaaatccaatgatta 24245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 4274341 - 4274407
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| |||| |||||| || |||||||||| |||||||    
T  4274341 tatcataaatgcaaagtgaaatatattgaattgagagtggtgaaaataatattaattagagttataa 4274407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 27868366 - 27868424
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||| || |||||||||||||| || |  ||||||||||||||||||    
T  27868366 ttatcataaatgcaaagtagaatatattgaattgagaatgatgaaagtagtattaatta 27868424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 39171608 - 39171542
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  39171608 tatcataaatgcaaagtggaatatattgaattgtgagtgatgaaaatagtattaattagagttataa 39171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 23765038 - 23764953
Alignment:
Q  390 tcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||| ||| || |||||||||||||| ||||  |||||  |||| ||| ||  |||||||||| ||||||||    
T  23765038 tcttctttatcataaatgtaaagtaaaatatattgaattgagagtgatgaaataagtactaactaaagttataattgaaagaaaaa 23764953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 27875183 - 27875252
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||| ||||||| |||||||||||| |   |||| ||||||||||||  |||||||||    
T  27875183 ttatcataaatgcaaagtataatacattgaattgggaatgtcgaaaatagtattaattaaagttataatt 27875252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 1230403 - 1230483
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt-ggaagaaaaa 475  Q
    |||||||||||||||| || |||||||||||||| ||||  || || || |||||||||  ||||||||| ||||||||||    
T  1230403 ttatcataaatgcaaagtagaatatattgaattgagagtgatggaaataatattaattaaagttataattgggaagaaaaa 1230483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 6115927 - 6115991
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| ||| |  | |||||||||||||||| ||||||| | |||||||||||    
T  6115927 gtttcaaaatgagtgtcgtttaaggtttttacacacatattaaaaaatgcattaattaaaagaaa 6115991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 474
Target Start/End: Original strand, 36012035 - 36012091
Alignment:
Q  418 tatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||| |||  |||||||||||||||||||| ||||||| ||||| ||||    
T  36012035 tatattgaattgtgagcggtgaaagtagtattaattagagttataagtggaaaaaaa 36012091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 5878267 - 5878318
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    |||||||||||| ||| || |||||||||||||| ||||||||||| |||||    
T  5878267 ttatcataaatgtaaagtagaatatattgaattgagagttgtgaaattagta 5878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 551
Target Start/End: Original strand, 31233857 - 31233932
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    ||||| |||||||||||||||| ||||  || | || ||||||||||||||||||||| || | ||||||| ||||    
T  31233857 tactccctctgtttcaaaatgaatgtcgcttaagatttttacacacatattaagaaatacattaattaaaaaaaaa 31233932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 5962519 - 5962581
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  |||||||||||||||||||  ||||| || |||||||||| |||||||    
T  5962519 ataaatgcaaagtggaatatattgaattgggagtgatgaaattaatattaattagagttataa 5962581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 7755104 - 7755158
Alignment:
Q  400 cataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||| |||||||| |||| ||| ||||  ||||||||||||||||||    
T  7755104 cataaatgcaaagtataatattttgagttgagagtgatgaaagtagtattaatta 7755158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 538
Target Start/End: Original strand, 9419986 - 9420048
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaat 538  Q
    ||||| ||| ||||||||||||||||| ||| || |  || ||||||||||||||||||||||    
T  9419986 tactccctccgtttcaaaatgagtgtcgtttaaagttgttccacacatattaagaaatgcaat 9420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 9734198 - 9734240
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaatt 428  Q
    |||||||||||||||||||||||||| || |||||||| ||||    
T  9734198 gcattcttctttatcataaatgcaaagtaaaatatattaaatt 9734240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 28802832 - 28802766
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||| || |||||||||| |||||||    
T  28802832 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaaatattattaattagagttataa 28802766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 29567271 - 29567213
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||||||| |||| || ||||||||| |||  ||||| ||||||||||||||||||    
T  29567271 ttatcataaatacaaagtaaaatatattgcattaagagttatgaaagtagtattaatta 29567213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 33826297 - 33826227
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||| |||  | |||||||||||||| || |  ||||||||||||| ||||| ||||||||||    
T  33826297 ttatcataaatgtaaagcagaatatattgaattgagaatgatgaaagtagtattgattagagttataattg 33826227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 42558623 - 42558681
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||||||||||| |  |||||||||||||  ||||  |||||||||||||||||||    
T  42558623 tatcataaatgcaaagtggaatatattgaattaagagtgatgaaagtagtattaattag 42558681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 44615411 - 44615473
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| || |||||||||||||| ||||  ||||| || |||||||||| |||||||    
T  44615411 ataaatgcaaagtagaatatattgaattgagagtgatgaaaataatattaattagagttataa 44615473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 5295356 - 5295393
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||||||||| | |||||||||||||    
T  5295356 tttacacacatattaagaaatgtattgattaaaagaaa 5295393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 540
Target Start/End: Original strand, 11335950 - 11336015
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatga 540  Q
    |||||| |||||||||||||||||||| ||||||    || ||||||| ||||||||||| |||||    
T  11335950 atactccctctgtttcaaaatgagtgttattttaggctttgacacacagattaagaaatgtaatga 11336015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 31410650 - 31410707
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||||||||||| |  |||||||||||||  ||||  ||||||||||||||||||    
T  31410650 tatcataaatgcaaagtggaatatattgaattaagagtaatgaaagtagtattaatta 31410707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 40362654 - 40362586
Alignment:
Q  487 tttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaa 556  Q
    ||||||||||| |||| |||||  | |||||||| |||||||||||||||||| ||| || |||||||||    
T  40362654 tttcaaaatgaatgtcgttttaggtatttacacatatattaagaaatgcaatgcttagaa-aaaagagaa 40362586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 2119791 - 2119715
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||| |||||||||||| ||| |  |||||| |||||| | |||||||||| ||  ||||||||| |||||||    
T  2119791 cattcttcattatcataaatgtaaagtggaatatactgaattagaagttgtgaaaataagattaattagagttataa 2119715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 475
Target Start/End: Original strand, 8394608 - 8394636
Alignment:
Q  447 attaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||||||||||    
T  8394608 attaattagtgttataattggaagaaaaa 8394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 551
Target Start/End: Complemental strand, 17656102 - 17656062
Alignment:
Q  511 tctttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    |||||| ||||||||||||||||| ||||||||| ||||||    
T  17656102 tctttatacacatattaagaaatgtaatgattaagagaaaa 17656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 17790110 - 17790174
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgtt 459  Q
    ||||||||||||  ||| || |||||||||| |||| ||| |||||| || ||||||||||||||    
T  17790110 tttatcataaatataaagtagaatatattgatttggaagtggtgaaaataatattaattagtgtt 17790174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 21587336 - 21587276
Alignment:
Q  403 aaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||| |  |||||||||||||||||||  ||||||||||||| || || |||||||    
T  21587336 aaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattgatcagcgttataa 21587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 29615861 - 29615797
Alignment:
Q  399 tcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||| ||| |  ||||||||||||||||| |  ||||||||||||||||||  |||||||    
T  29615861 tcataaatgtaaagtggaatatattgaattgggaatgatgaaagtagtattaattaaagttataa 29615797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 38589810 - 38589727
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38589810 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaa 38589727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 29997060 - 29997140
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  29997060 gcattcttctttatcataaatgcaaagtataatatattgagttgggaattgtgaaagtagtattaattagtattataattg 29997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 32776059 - 32775976
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  32776059 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattatttagagttataattggaa 32775976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 37264382 - 37264310
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  37264382 tctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataatt 37264310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 475 - 550
Target Start/End: Complemental strand, 6747457 - 6747382
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||| ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  6747457 atactctctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 6747382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 9602937 - 9602858
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  9602937 gcattcttttttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataatt 9602858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 9830508 - 9830429
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||| ||||||||||||||||| || || ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  9830508 gcattcttttttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataatt 9830429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 38181916 - 38181982
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  38181916 tatcataaatgcaaaatagaatatattgaattggaagttgtgaaagtagtattaattagagttataa 38181982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 2849331 - 2849251
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || |||||||||||||| |||| ||||||||||||||||||||  |||||||||    
T  2849331 gcattcttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagaattataattg 2849251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 32972049 - 32972129
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||| ||| ||||||||||||| || |||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  32972049 gcattcttttttgtcataaatgcaaagtagaatatattgaattgtgagtggtgaaagtattattaattagtgttataattg 32972129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 450
Target Start/End: Original strand, 45218189 - 45218253
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtatta 450  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||    
T  45218189 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtatta 45218253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 27337904 - 27337987
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||| || |||||| |||||||||  |||||||||||||    
T  27337904 gcattattctttatcataaatgtaaagtataatatattgaattgggagtggtaaaagtaatattaattaaagttataattggaa 27337987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 47238293 - 47238210
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || || || ||||  || |||| ||||||||||||||||||||||||||||||||||    
T  47238293 gcattcttctttatcataaatgcaaagtacaaaatgttgagatgagagtggtgaaagtagtattaattagtgttataattggaa 47238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 39343704 - 39343782
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||| ||| || ||||||||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  39343704 attcttctttatcataaatgtaaagtagaatatattgaatttggagtggtgaaaatagtattaattagagttataattg 39343782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 568
Target Start/End: Complemental strand, 2297274 - 2297183
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||||| |||||||||||||| | |||| |||||  | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2297274 atactccctctgtttcaaaattattgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 2297183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 568
Target Start/End: Complemental strand, 37502550 - 37502459
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||||| ||| |||| ||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  37502550 atactcactccgttttaaaatgagtgtcattttatgtgtttacacacatattaagaaatacaatgattaaaag-aaagag-aatgattatttta 37502459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 715794 - 715858
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||    
T  715794 gtttcaaaatgagtgtcgttttagctctttacacatatattaagaaatgcaatgattaaaagaaa 715858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 12977617 - 12977681
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  12977617 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 12977681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 12983075 - 12983139
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  12983075 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 12983139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 18270798 - 18270734
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  18270798 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 18270734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 18292555 - 18292491
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  18292555 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 18292491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 30462736 - 30462656
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| || ||||||||||||| ||||||||||||||||||||| ||||  ||||| ||||||||||||| ||||||||||    
T  30462736 gcattattttttatcataaatgtaaaatataatatattgaattgagagtgatgaaattagtattaattagagttataattg 30462656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 30659514 - 30659594
Alignment:
Q  389 ttcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||||  ||| || ||||||||||||| | ||| |||||||||||||||||||| |||||||||||||    
T  30659514 ttcttctttatcataaatataaagtagaatatattgaatttgaagtggtgaaagtagtattaattagagttataattggaa 30659594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 475
Target Start/End: Complemental strand, 25778810 - 25778731
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||| || ||||||||||||||| |||  ||||||||||||||||||| ||||||||| ||| |||||    
T  25778810 ttatcataaatgcaaagtaaaatatattgaattggaagtgatgaaagtagtattaattagagttataattagaaaaaaaa 25778731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 24288499 - 24288417
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgga 468  Q
    |||||||||||||||||||||| ||| || ||||||||||||||  || |||||| ||| |||||||||| ||||||||||||    
T  24288499 gcattcttctttatcataaatgtaaagtagaatatattgaattgaaagctgtgaatgtaatattaattagagttataattgga 24288417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 469
Target Start/End: Original strand, 5068335 - 5068412
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||| ||| || |||||||||||||  |||| ||||||||| |||||||||| |||||||||||||    
T  5068335 ttctttatcataaatgtaaagtagaatatattgaattaagagtggtgaaagtaatattaattagagttataattggaa 5068412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 39498740 - 39498671
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||  ||||||||    
T  39498740 ttatcataaattcaaaatataatatattgaattgggagtgatgaaagtaatattaattagaattataatt 39498671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 550
Target Start/End: Original strand, 31929778 - 31929854
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||| |||  |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| |||||    
T  31929778 aatactccctccatttcaaaatgagtgtcgttttagatgtttacacatatattaagaaatgcaatgattaacagaaa 31929854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 18731513 - 18731435
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||| ||| || ||||||||||||||| ||| |||||   |||||||||||| |||||||||||||    
T  18731513 attcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaa---agtattaattagagttataattggaa 18731435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 37496428 - 37496511
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||  |||||||||||| ||| || |||||||||||||| ||||  ||||||||||||||||||  |||||||||||||    
T  37496428 gcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtagtattaattaaagttataattggaa 37496511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 27621878 - 27621828
Alignment:
Q  425 aattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27621878 aattgggagttgtgaaagtagtattaattagagttataattgaaagaaaaa 27621828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 33584628 - 33584562
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||  |||||||    
T  33584628 tatcataaatgcaaaatggaatatattgaattgggagtgatgaaagtagtattaattatagttataa 33584562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 7425920 - 7425985
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttata 462  Q
    ||||||||||||||| |  ||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  7425920 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtattaactagagttata 7425985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 10355773 - 10355846
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||| || |||||||||||||| || | || |||||| |||||||||| ||||||||||    
T  10355773 tctttatcataaatgcaaagtagaatatattgaattgagaatggtaaaagtaatattaattagagttataattg 10355846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 14648960 - 14649033
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||  || |||||||||||||| ||||  |||||||| |||||||||| |||||||||||||    
T  14648960 ttatcataaatgcaaggtagaatatattgaattgagagtgatgaaagtaatattaattagagttataattggaa 14649033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 28333237 - 28333164
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| ||| || |||||||||||||||||||  |||||||| |||||||||| |||||| ||||||    
T  28333237 ttatcataaatgtaaagtagaatatattgaattgggagtgatgaaagtaatattaattagagttatatttggaa 28333164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 25441074 - 25441012
Alignment:
Q  504 ttttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  25441074 ttttagatctttacacacatattaagaaatgtaatgattaaaag-aaagag-aatgattatttta 25441012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 34064291 - 34064211
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||  |||||||||||| ||| || |||||||||||||| ||||  |||||||| |||||||||| ||||||||||    
T  34064291 gcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaatattaattagagttataattg 34064211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 469
Target Start/End: Original strand, 23111593 - 23111644
Alignment:
Q  418 tatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  23111593 tatattgaattgagactggtgaaagtagtattaattagtgttataattggaa 23111644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 43007970 - 43007887
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||||||||  ||| || |||||||||||||| |||| |||||| || |||||||||| ||||| |||||||    
T  43007970 gcatttttctttatcataaatttaaattagaatatattgaattgagagtggtgaaaataatattaattagagttattattggaa 43007887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 29257612 - 29257546
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||| |||||||    
T  29257612 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 29257546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 36070181 - 36070093
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||| |||||||||||||| | ||| || |||||| ||||||| ||||  ||||||||||||||||||| | ||||||| |||||||||    
T  36070181 gcattattctttatcataaacgtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagctataatt-gaagaaaaa 36070093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 39143880 - 39143967
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||| ||| ||||||||||||||| |||||| ||||| || ||| |||||| || |||||||||   |||||||||||| |||||    
T  39143880 attcttccttaccataaatgcaaaatagaatataatgaatcggaagtggtgaaaataatattaattataattataattggaaaaaaaa 39143967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 25940790 - 25940856
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttata 462  Q
    |||||||||||||||| || |||||||| ||||  ||||  ||||||||||||||||||| ||||||    
T  25940790 ttatcataaatgcaaactagaatatattaaatttagagtgatgaaagtagtattaattagagttata 25940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 46288473 - 46288539
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||| |||||||| |  ||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  46288473 tatcattaatgcaaagtggaatatattgaattgaaagttatgaaagtagtattaattagagttataa 46288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 1643369 - 1643438
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||||| | |||||||||||||| |  |||||||| |||||  ||||| ||||||||||||||||||    
T  1643369 gcattcttcataatcataaatgcaaagtggaatatattaaattgaaagttgggaaagtagtattaattag 1643438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 3667918 - 3667991
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| ||| || |||||||||||||| ||||  |||||||| ||||||||||  ||||| ||||||    
T  3667918 ttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaatattaattagaattatatttggaa 3667991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 12308422 - 12308377
Alignment:
Q  418 tatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||    
T  12308422 tatattgaattggaagttgtgaaagtaatattaattagagttataa 12308377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 454
Target Start/End: Original strand, 21412066 - 21412134
Alignment:
Q  386 gcattcttcttt-atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||| |||||||||| ||| || |||||||||||||| || | |||||||||||||||||||    
T  21412066 gcattcttcttttatcataaatgtaaagtaaaatatattgaattgaga-tggtgaaagtagtattaatta 21412134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 455
Target Start/End: Complemental strand, 19688025 - 19687965
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtag-tattaattag 455  Q
    |||||||||||||||| ||||||||||||||||| || |  ||||||||| ||||||||||    
T  19688025 ttatcataaatgcaaagtataatatattgaattgtgaatcatgaaagtagttattaattag 19687965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 29434624 - 29434688
Alignment:
Q  399 tcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||| |  |||||||||||||| || |  ||||||||||||||||||| |||||||    
T  29434624 tcataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttataa 29434688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 31581485 - 31581557
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||| |||||  ||||||||||||||  | |  ||||||||||||||||||| ||||||| |||||    
T  31581485 tatcataaatgtaaaatggaatatattgaattgaaaatgatgaaagtagtattaattagagttataaatggaa 31581557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 31883970 - 31883924
Alignment:
Q  520 acatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  31883970 acatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 31883924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 6838138 - 6838083
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaa 441  Q
    |||||||||||||||||||||  ||| || |||||||||||||| |||| ||||||    
T  6838138 gcattcttctttatcataaatataaagtaaaatatattgaattgagagtggtgaaa 6838083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 11616627 - 11616560
Alignment:
Q  397 tatcataaatgcaaaatataatata-ttgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||| ||||||| |  |||||| ||||||||||||| |||||||| ||||||||||| |||||||    
T  11616627 tatcatatatgcaaagtggaatataattgaattgggagtggtgaaagttgtattaattagagttataa 11616560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 17266103 - 17266020
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||  ||||||||||||||| |  ||||||| |||||||||||  ||||| || |||||||||| | |||| ||||||    
T  17266103 gcattcttcactatcataaatgcaaagtgaaatatatcgaattgggagtgatgaaaataatattaattagagatatatttggaa 17266020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 551
Target Start/End: Original strand, 47461282 - 47461361
Alignment:
Q  472 aaaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    |||||||||  || ||||||||||||  ||| ||| |||| ||||||||||||||||||||| || | ||||||| ||||    
T  47461282 aaaatactccatccgtttcaaaatgaacgtcgtttaaaatttttacacacatattaagaaatacattaattaaaaaaaaa 47461361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 48843780 - 48843721
Alignment:
Q  491 aaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||| ||| |  | |||||| ||||||||||||||||| |||||||||||||    
T  48843780 aaaatgagtgtcgtttaaggtttttacatacatattaagaaatgcactgattaaaagaaa 48843721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 2846718 - 2846784
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||| |||| |  ||||||||||||||| | |  ||||||||||||||||||| |||||||    
T  2846718 tatcataaattcaaagtggaatatattgaattggaattgatgaaagtagtattaattagagttataa 2846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 6591582 - 6591652
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| || |||||||||||||  ||||  |||| ||| |||||||||  ||||||||||    
T  6591582 ttatcataaatgcaaagtagaatatattgaattaagagtaatgaacgtaatattaattatagttataattg 6591652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 23186185 - 23186251
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||| |||| || ||||||||||||| |||||  | |||||||| |||||||| |||||||    
T  23186185 tatcataaatacaaagtagaatatattgaatttggagtgataaaagtagtgttaattagagttataa 23186251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 33774085 - 33774143
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||| ||||||| |  |||||| |||||||  ||||||||||||||||||||||||    
T  33774085 tatcatagatgcaaagtggaatatactgaattgtaagttgtgaaagtagtattaattag 33774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 34001900 - 34001958
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||| |  |||||||||||||| | ||  ||||||||||||||||||    
T  34001900 ttatcataaatgcaaagtggaatatattgaattgagggtgatgaaagtagtattaatta 34001958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 34275024 - 34274950
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||| |||| ||||| | |||| |||||  | ||||||| ||||||||||||| ||||||||||||||||    
T  34275024 tactccctccgttttaaaataaatgtcgttttaggtgtttacacgcatattaagaaatacaatgattaaaagaaa 34274950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 546
Target Start/End: Complemental strand, 42286138 - 42286068
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaa 546  Q
    ||||| ||| |||| ||||||| |||| ||| |  | |||||| |||||||||||||||||||||||||||    
T  42286138 tactccctccgttttaaaatgaatgtcgtttaaggtttttacaaacatattaagaaatgcaatgattaaaa 42286068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 2842094 - 2842151
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||||||||||| |  |||||||||||||  ||||  ||||||||||||||||||    
T  2842094 tatcataaatgcaaagtgaaatatattgaatttagagtgatgaaagtagtattaatta 2842151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 3781240 - 3781289
Alignment:
Q  417 atatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||||  ||||| || |||||||||| ||||||||||    
T  3781240 atatattgaattgggagtaatgaaaatattattaattagagttataattg 3781289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 4268856 - 4268819
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||||||||||| | |||||||||||    
T  4268856 tttacacacatattaagaaatgcattaattaaaagaaa 4268819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 4268935 - 4268898
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||||||||||| | |||||||||||    
T  4268935 tttacacacatattaagaaatgcattaattaaaagaaa 4268898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 509
Target Start/End: Complemental strand, 16562833 - 16562800
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaa 509  Q
    |||||||||||||| |||||||||||||||||||    
T  16562833 tactctctctgttttaaaatgagtgtcattttaa 16562800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 16602829 - 16602862
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaa 509  Q
    |||||||||||||| |||||||||||||||||||    
T  16602829 tactctctctgttttaaaatgagtgtcattttaa 16602862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 27234568 - 27234491
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||||||||||   |||||||| ||||| ||||  ||||| ||||||||||||  |||||| |||||| ||||    
T  27234568 tatcataaatgcaaaacgaaatatattaaattgtgagtgatgaaaatagtattaattaaagttatatttggaaaaaaa 27234491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 27242775 - 27242840
Alignment:
Q  400 cataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||| |||||||||||||| || |  ||||| ||  ||||||||| |||||||||    
T  27242775 cataaatgcaaaataaaatatattgaattgagaatgatgaaaataaaattaattagagttataatt 27242840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 475
Target Start/End: Complemental strand, 32346584 - 32346508
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||| || |||||||| |||| ||| |   |||||||||||||||||  || |||||| |||||||||    
T  32346584 ttatcataaatgcaaagtaaaatatattaaatttggaat---gaaagtagtattaattaaagtcataattagaagaaaaa 32346508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 570
Target Start/End: Original strand, 44567002 - 44567054
Alignment:
Q  515 tacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattattttatc 570  Q
    |||| ||||||||||||||||||| ||||||| |||||   |||||||||||||||    
T  44567002 tacatacatattaagaaatgcaataattaaaaaaaaag---aatgattattttatc 44567054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 23703981 - 23703909
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||| |||||  ||||||||||||||  | |  | ||||||||||||||||| ||||||| |||||    
T  23703981 tatcataaatgtaaaatgaaatatattgaattgaaaatgataaaagtagtattaattagagttataaatggaa 23703909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 30459138 - 30459058
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| |||||||| ||||||| |||||| |||||||||||||| || |  ||||| |  ||||||||||  |||||||||    
T  30459138 gcattattctttataataaatgtaaaatagaatatattgaattgagaatgctgaaaatgttattaattagaattataattg 30459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 46095462 - 46095518
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatt 453  Q
    ||||||||||||||| |  |||||||||||||| ||||  | |||||||||||||||    
T  46095462 tatcataaatgcaaagtgaaatatattgaattgagagtgataaaagtagtattaatt 46095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 10823 - 10910
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||    
T  10823 cattcttctttatcataaatgcaaagtaaaatatattgaattaggagtggtgaaagtagtattaattagttttataattggaaaaaaa 10910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 37315953 - 37316036
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37315953 gcatttttctttatcataaatgcaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagtgttataattggaa 37316036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 38319987 - 38319904
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  38319987 gcattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgttataattggaa 38319904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 42132889 - 42132806
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  42132889 gcattcttctttatcataaatgcaaagtagaatatattgaattggaagtggtgaaagtaatattaattagtgttataattggaa 42132806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 54217416 - 54217335
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  54217416 attcttctttatcataactgcaaagtataatatattgaattgggagtggtgaaagtggtattaattaatgttataattggaa 54217335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 8759855 - 8759772
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  8759855 gcatttttctttatcataaatgcaaagtagaatatattgaattgggagttgtgaaattattattaattagtgttataagtggaa 8759772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 29550764 - 29550838
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29550764 ttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattg 29550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 28330870 - 28330781
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||||||||||||||||||  | | ||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||    
T  28330870 gcattcttctttatcataaatgcaaagcagattatattgaattgggagtggtgaaagtaatattaattagtgttataattgaaaaaaaaa 28330781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 10099756 - 10099836
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| |||||||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10099756 gcatttttctttatcataaatttaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattg 10099836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 36047131 - 36047219
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||| ||||||||| ||||||| |||||| ||||    
T  36047131 gcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttatagttggaaaaaaa 36047219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 39052932 - 39053009
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||||||||| |||||||    
T  39052932 gcattcttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagagttataa 39053009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 20964319 - 20964399
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||| |||||||||| || ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||    
T  20964319 gcattcttctttatcgtaaatgcaaagtagaatatatcgaattggaagtggtgaaagtagtattaattagtcttataattg 20964399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 35998149 - 35998225
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||||||||| |||||||    
T  35998149 cattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtagtattaattagagttataa 35998225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 22220296 - 22220359
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaa 549  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  22220296 gtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaatgattaaaagaa 22220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 25149518 - 25149444
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||| ||| |  ||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  25149518 tttatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtagtattaattagagttataattggaa 25149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 22020551 - 22020632
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||||||||||||| || |||||||||||||| || | |||||||||||| ||||||| ||||||||||||| |||||||    
T  22020551 ttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtaataattagagttataattggaaaaaaaata 22020632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 32949880 - 32949969
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| |||| |||||| || ||||||||||||| |||||||||| |||||    
T  32949880 gcatttttctttatcataaatgtaaagtagaatatattgaattgagagtagtgaaaataatattaattagtgtaataattggaaaaaaaa 32949969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 38510182 - 38510247
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    |||| |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38510182 gttttaaaatgagtgtcgttttagatctttacacacatattaaaaaatgcaatgattaaaagaaaa 38510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 49218820 - 49218893
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||| |||| ||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  49218820 tctttatcataaattcaaagtataatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 49218893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 55360379 - 55360468
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||||||||| ||| || |||||||||||||| ||||  |||||||| |||||||||| |||||||||| || |||||    
T  55360379 gcattcttctttatcataaatgtaaagtacaatatattgaattgagagtgatgaaagtaatattaattagagttataattgaaaaaaaaa 55360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 474 - 550
Target Start/End: Original strand, 7905921 - 7905997
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||| ||| |||| |||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||    
T  7905921 aatactccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 7905997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 570
Target Start/End: Complemental strand, 25231395 - 25231313
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattattttatc 570  Q
    ||||||| ||||||||| |||||  | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  25231395 gtttcaatatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaag-aaagag-aatgattattttatc 25231313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 52915479 - 52915559
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||||||||||| |||||  |||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  52915479 gtttcaaaatgagtgtcgttttaggtctttatacacatattaagaaatacaatgattaaaag-aaagag-aatgattatttta 52915559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 477
Target Start/End: Complemental strand, 4354518 - 4354434
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||||||||||||| ||  || |||||||| ||||| ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  4354518 ttctttatcataaatgtaatttagaatatattaaattgagagttgtgaaagtagtattaattatagttataattgg-agaaaaata 4354434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 49448907 - 49448838
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||| ||||||||||||||||| || |  ||||||||||||||||||| |||||||||    
T  49448907 ttatcataaatgcaaagtataatatattgaattgagaatgatgaaagtagtattaattagagttataatt 49448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 43337672 - 43337766
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattattttatc 570  Q
    ||||||||||| |||| ||||||||||| ||||||  | ||||||||| |||| |||||| ||||||||||||| |||||| |||||||||||||||    
T  43337672 aatactctctccgttttaaaatgagtgttattttaggtgtttacacacgtattgagaaatacaatgattaaaag-aaagag-aatgattattttatc 43337766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 474
Target Start/End: Complemental strand, 44633232 - 44633145
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    |||||||||||||| ||||||| ||| || || |||||||||||  ||| |||||||||||||||||||| ||||||||||||| ||||    
T  44633232 gcattcttctttatgataaatgtaaagtagaa-atattgaattgaaagtggtgaaagtagtattaattagagttataattggaaaaaaa 44633145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 22872419 - 22872502
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||| | |||||||||||||||| |  |||||||||||||| ||||  |||||||| |||||||||| |||||||||||||    
T  22872419 gcattctccattatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataattggaa 22872502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 455
Target Start/End: Original strand, 48400664 - 48400731
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    |||||||||||||||||||| ||| || |||||||||||||| |||||||||||||  ||||||||||    
T  48400664 attcttctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaagtgatattaattag 48400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 1796284 - 1796350
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  1796284 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtataaattagagttataa 1796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 4505566 - 4505492
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||| ||||||||||||||| | |||||  | |||||| |||||||||||||||||||||||||||||||    
T  4505566 tactccctccgtttcaaaatgagtgccgttttaggtgtttacaaacatattaagaaatgcaatgattaaaagaaa 4505492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 18849801 - 18849867
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  18849801 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtaatattaattagagttataa 18849867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 37624776 - 37624696
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||| |||||||||||| |||||  | ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  37624776 gttttaaaatgagtgtcgttttaggtgtttacactcatattaagaaatgcaatgattaaaag-aaagag-aatgattatttta 37624696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 47846964 - 47846896
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||| |  ||||||||||||| |||||  ||||||||||||||||||| |||||||||    
T  47846964 tatcataaatgcaaagtgaaatatattgaattaggagtgatgaaagtagtattaattagagttataatt 47846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 550
Target Start/End: Original strand, 51733420 - 51733495
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||  |||||||||||| |||| |||||  | |||| |||||||||||||||||||||||||||||||||    
T  51733420 aatactctcttcgtttcaaaatgaatgtcgttttaggtgttta-acacatattaagaaatgcaatgattaaaagaaa 51733495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 5499470 - 5499540
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||| |||||||||| ||||||||||||| |||||  |||||||| |||||||||| || |||||||    
T  5499470 ttatcatagatgcaaaatagaatatattgaattaggagtgatgaaagtaatattaattagagtcataattg 5499540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 26799258 - 26799324
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||| |||||||||||||| || |  |||||||| |||||||||| |||||||    
T  26799258 tatcataaatgcaaaatagaatatattgaattgagaatgatgaaagtactattaattagagttataa 26799324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 40020989 - 40021059
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||| |||||||| | |||||||| ||||||||||  ||| ||||||||||||||| ||||||||||    
T  40020989 ttatcatagatgcaaaaaagaatatattaaattgggagtgatgacagtagtattaattagagttataattg 40021059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 41710186 - 41710252
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||| |||||||    
T  41710186 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 41710252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 465
Target Start/End: Original strand, 47277714 - 47277792
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||| |||||||||||||||| ||| || |||||||||||||| ||||  | ||||||||||||||||  |||||||||    
T  47277714 catttttctttatcataaatgtaaagtaaaatatattgaattgagagtgattaaagtagtattaattatagttataatt 47277792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 49306652 - 49306586
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||| |||||  ||||||||||||||||||| |||||||    
T  49306652 tatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtattaattagagttataa 49306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 4357641 - 4357561
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||  |||||||||| ||||| | |||||||||||||||||||  ||||| ||||||||||||| ||||||| |||||    
T  4357641 attcttcactatcataaatacaaaaaa-aatatattgaattgggagtgatgaaaatagtattaattagagttataaatggaa 4357561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 41436546 - 41436469
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaa 474  Q
    ||||||||||||||| || ||||| |||||||| || |  ||||||||||||||||||| ||||||||| ||| ||||    
T  41436546 tatcataaatgcaaagtagaatattttgaattgcgaatgatgaaagtagtattaattagagttataattagaaaaaaa 41436469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 3505789 - 3505709
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||||| ||| || |||||||||||||| || | |||||||||  ||||||||| |||||||||| || |||||    
T  3505789 tttatcataaatgtaaagtagaatatattgaattgagattagtgaaagtatgattaattagagttataattgaaaaaaaaa 3505709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 28279913 - 28279833
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| |||||||||||||||  ||| || |||||||| |||||| ||  |||||| ||||||||||||| ||||||||||    
T  28279913 gcatttttctttatcataaatataaagtagaatatatttaattggaagcagtgaaaatagtattaattagagttataattg 28279833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 42051687 - 42051767
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || |||||| |||||||| ||| |||||| || || |||||||  |||||||||    
T  42051687 gcattcttctttatcataaatgtaaagtagaatataatgaattggaagtggtgaaaataataataattagaattataattg 42051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 51572270 - 51572338
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||| ||| | |||||||||||||||| |||  | ||||||||||||||||| |||||||||    
T  51572270 tatcataaatgtaaagtgtaatatattgaattggaagtgataaaagtagtattaattagagttataatt 51572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 8295094 - 8295030
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||  |||||||||||||||||||||   |||||||||||| |||||| |||||||    
T  8295094 tatcataaatgcaatgtataatatattgaattgggag--atgaaagtagtataaattagagttataa 8295030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 9052111 - 9052170
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||  || |  ||||||||||||||||||||||||||||||||| |||||    
T  9052111 aatatattgaattcagaatgatgaaagtagtattaattagtgttataattggaaaaaaaa 9052170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 43421365 - 43421318
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagta 444  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  43421365 tatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagta 43421318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 49401731 - 49401652
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||| |||||||| ||||||| ||| || ||||||||||||||| | || ||||||| ||||||||||| || |||||||    
T  49401731 cattgttctttattataaatgtaaagtagaatatattgaattggaaattatgaaagtggtattaattagagtcataattg 49401652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 34790982 - 34791060
Alignment:
Q  386 gcattcttctttatcataaatgcaaaa-tataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||||| | |||| || |||||||||||||| ||||  | || |||||||||||||| |||||||    
T  34790982 gcattcttctttatcataaaagtaaaagtagaatatattgaattgagagtgataaatgtagtattaattagagttataa 34791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 37309763 - 37309697
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  |||||||| |||||||||| |||||||    
T  37309763 tatcataaatgcaaagttaaatatattgaattgagagtgatgaaagtaatattaattagagttataa 37309697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 38615004 - 38615042
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagt 434  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38615004 ttatcataaatgcaaaataaaatatattgaattgggagt 38615042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 4360453 - 4360522
Alignment:
Q  400 cataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||| |  |||||||||||||| || |  ||||||||||||||||||| |||||| ||||||    
T  4360453 cataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttatatttggaa 4360522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 17237108 - 17237039
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||| |  ||||||||||||||  ||   ||||||||||||||||||| ||||||||||    
T  17237108 tatcataaatgcaaagtggaatatattgaattgaaagcgatgaaagtagtattaattagagttataattg 17237039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 22129136 - 22129181
Alignment:
Q  420 tattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||    
T  22129136 tattgaattgtgagtggtgaaagtagtattaattagagttataatt 22129181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 28308919 - 28308882
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28308919 tttacacatatattaagaaatgcaatgattaaaagaaa 28308882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 38160183 - 38160272
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||| | ||||||||||| |||| |  |||||||||||||| ||||  | |||||| |||||||||| |||||||||| || |||||    
T  38160183 gcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagtaatattaattagagttataattgaaaaaaaaa 38160272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 42185857 - 42185910
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||| ||||  ||||||||||||||||||| ||||||| |||||    
T  42185857 aatatattgaattgagagtgatgaaagtagtattaattagagttataaatggaa 42185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 46958788 - 46958715
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||| ||||| || |||||||||||||| ||||  | ||||||||||||||| |  ||||||||||||    
T  46958788 ttatcataaacgcaaagtagaatatattgaattgagagtgattaaagtagtattaatttgaattataattggaa 46958715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 53848722 - 53848661
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    ||||| || ||||||||||||||||| || |||||||||||||| ||||  |||||||||||    
T  53848722 gcattattatttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagta 53848661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 476
Target Start/End: Complemental strand, 12619754 - 12619674
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaat 476  Q
    ||||||||||| ||||||  |||||||||||||   |||  |||||||||||||||||||  |||||| ||||| ||||||    
T  12619754 ttatcataaatacaaaatgaaatatattgaatttaaagtgatgaaagtagtattaattagaattataagtggaaaaaaaat 12619674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 19451131 - 19451195
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||| |||  ||| || | |||||||||||||||||||||||| | |||||||||||    
T  19451131 gtttcaaaatgaatgttgtttaaagtttttacacacatattaagaaatgcattaattaaaagaaa 19451195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 454
Target Start/End: Complemental strand, 37787037 - 37786969
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    ||||||||||||| |||||||| |||||| |||||||| |||||  ||| |||||| || |||||||||    
T  37787037 gcattcttctttaccataaatgtaaaatagaatatattaaattgaaagtggtgaaaataatattaatta 37786969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 463
Target Start/End: Original strand, 39976438 - 39976498
Alignment:
Q  403 aaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||| |  |||||||||||||| ||||  |||||||||||||||| ||||||||||    
T  39976438 aaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaatcagtgttataa 39976498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 18509505 - 18509454
Alignment:
Q  403 aaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||| |||| ||||||||||||||||||||||  |||||||| |||||||||    
T  18509505 aaatacaaagtataatatattgaattgggagtgatgaaagtattattaatta 18509454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 25250634 - 25250705
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgg 467  Q
    |||||||||||||| | || |||||||| ||||  ||||  ||||| ||||||||||||| |||||||||||    
T  25250634 ttatcataaatgcatagtagaatatattaaattaagagtgatgaaactagtattaattagagttataattgg 25250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 29815158 - 29815205
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| ||| ||||||||| |||||||||| |||||||    
T  29815158 aatatattgaattggaagtggtgaaagtaatattaattagagttataa 29815205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 3686072 - 3686010
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  |||||||||||||| ||||  |||||||| |||||||||| |||||||    
T  3686072 ataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataa 3686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 16493357 - 16493403
Alignment:
Q  416 aatatattgaattgggagttgtgaaagtagtattaattagtgttata 462  Q
    ||||||||||||||| |||| |||||||| |||||||||| ||||||    
T  16493357 aatatattgaattggaagttatgaaagtaatattaattagagttata 16493403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 27977208 - 27977134
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||| |  |||||||||||||| ||||  |||||||  |||||||||| |||||||| |||| |||||    
T  27977208 ataaatgcaaagtggaatatattgaattgagagtgatgaaagtgatattaattagagttataataggaaaaaaaa 27977134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 29644420 - 29644354
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| || |||||||||||||| || |  ||||||||||||||||||  |||||||    
T  29644420 tatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaattatagttataa 29644354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 32559224 - 32559162
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||| ||||||||  |||||||| |||| |||||  ||||||||||||||||||| |||||||    
T  32559224 ataagtgcaaaatggaatatattaaattaggagtgatgaaagtagtattaattagagttataa 32559162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 42024247 - 42024309
Alignment:
Q  401 ataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |  ||||||||||||||| |||  ||||||||||||||||||  |||||||    
T  42024247 ataaatgcaaagtggaatatattgaattggaagtgatgaaagtagtattaattatagttataa 42024309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 42544274 - 42544208
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  | |||||| |||||||||| |||||||    
T  42544274 tatcataaatgcaaagtggaatatattgaattgtgagtgataaaagtaatattaattagagttataa 42544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 47787889 - 47787955
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| |||||| ||||||| ||||||  | |  ||||||||||||||||||| |||||||    
T  47787889 tatcataaatgtaaaataaaatatatggaattgaaaatgatgaaagtagtattaattagagttataa 47787955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 47817979 - 47817905
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||| |||||||||||| |||| ||| |  | |||| ||||||||||||||||||| | |||||||||||    
T  47817979 tactccctccgtttcaaaatgaatgtcgtttaagttttttatacacatattaagaaatgcattaattaaaagaaa 47817905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 54729526 - 54729591
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| | ||  ||||||||||||||||||| |||||||    
T  54729526 tatcataaatgcaaagtggaatatattgaattgag-gtgatgaaagtagtattaattagagttataa 54729591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 3512036 - 3512089
Alignment:
Q  398 atcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaa 451  Q
    |||||||| |||||||| |||||||||||||  || || |||||||||||||||    
T  3512036 atcataaaagcaaaatagaatatattgaattatgaattatgaaagtagtattaa 3512089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 10309297 - 10309354
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||||| |||||||||||||| ||    |||||||| |||||||||    
T  10309297 tatcataaatgcaaaataaaatatattgaattgagataaatgaaagtaatattaatta 10309354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 11469910 - 11469843
Alignment:
Q  409 aaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||| ||||||||||||||  |||| | ||| | ||||||||||| ||||||||| |||||||||||    
T  11469910 aaaataaaatatattgaattgcaagttattaaattcgtattaattagagttataatt-gaagaaaaata 11469843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 11521551 - 11521618
Alignment:
Q  409 aaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaata 477  Q
    |||||| ||||||||||||||  |||| | ||| | ||||||||||| ||||||||| |||||||||||    
T  11521551 aaaataaaatatattgaattgcaagttattaaattcgtattaattagagttataatt-gaagaaaaata 11521618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 528
Target Start/End: Complemental strand, 24157362 - 24157310
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaa 528  Q
    |||||||||||||| ||||||| |||| ||| || | ||||||||||||||||    
T  24157362 tactctctctgttttaaaatgaatgtcgtttaaagtttttacacacatattaa 24157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 550
Target Start/End: Complemental strand, 30261493 - 30261425
Alignment:
Q  482 ctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||||| | || ||| || | ||||||||||||||||||||| || | ||| |||||||    
T  30261493 ctctgtttcaaaatgaatatcgtttaaagtttttacacacatattaagaaatacattaatttaaagaaa 30261425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 30680471 - 30680523
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaa 440  Q
    |||||||||||| ||||||| ||| ||||||||||| |||| ||||| |||||    
T  30680471 attcttctttatgataaatgtaaagtataatatattaaattaggagtggtgaa 30680523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 550
Target Start/End: Original strand, 36558258 - 36558290
Alignment:
Q  518 acacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| |||||||||||||||||||||||||||    
T  36558258 acacacattaagaaatgcaatgattaaaagaaa 36558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 15898267 - 15898187
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  15898267 gcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataattg 15898187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 550
Target Start/End: Original strand, 10344852 - 10344929
Alignment:
Q  473 aaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||| ||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||    
T  10344852 aaatactccctccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaatgattaaaagaaa 10344929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 25108649 - 25108566
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||   ||||||||||||    
T  25108649 gcattcttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagtagtattaattaaaattataattggaa 25108566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 25167741 - 25167658
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||   ||||||||||||    
T  25167741 gcattcttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagtagtattaattaaaattataattggaa 25167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 39060986 - 39061065
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||| ||||||||| ||||||||| ||||||||||    
T  39060986 gcattcttctttatcataaatgcaaagtagaatatattgaattaggagtggtgaaagtaatattaattaatgttataatt 39061065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 13016402 - 13016473
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  13016402 tctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtaatattaattagttttataat 13016473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 25111180 - 25111263
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| ||| |||||||||||||||||||   ||||||||||||    
T  25111180 gcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtattaattaaaattataattggaa 25111263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 25170271 - 25170354
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| ||| |||||||||||||||||||   ||||||||||||    
T  25170271 gcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtattaattaaaattataattggaa 25170354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 31090380 - 31090300
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||| ||||| || ||||||| |||||| ||||  ||||||||||||||||||||||||| ||||    
T  31090380 gcattcttctttatcataaacgcaaagtagaatatatggaattgagagtgttgaaagtagtattaattagtgttatgattg 31090300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 13087780 - 13087851
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    ||||||||||||||||||| || |||||||||||||| |||| ||||||||| ||||||||||| |||||||    
T  13087780 tctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagttttataat 13087851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 36006924 - 36007007
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || |||||| |||||||| ||| |||||| || |||||||||| |||||||||||||    
T  36006924 gcattcttctttatcataaatgtaaagtagaatatactgaattggaagtggtgaaaataatattaattagagttataattggaa 36007007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 38978979 - 38978900
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||| ||||||||||||||||||| || |||||||| ||||| ||||||||| ||||||||||||||| ||||| ||||    
T  38978979 cattcctctttatcataaatgcaaagtagaatatattaaattgagagttgtgatagtagtattaattagagttatgattg 38978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 39212593 - 39212671
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    |||||||||||||||| || ||||||||||||||||||   ||||||||||||||||||| ||||||||| |||||||||    
T  39212593 ttatcataaatgcaaagtagaatatattgaattgggagcgatgaaagtagtattaattagagttataatt-gaagaaaaa 39212671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 43525553 - 43525475
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||| ||||||||||||| ||| |||||||| ||||||||| ||| |||||||||||||||||||| |||||||||    
T  43525553 gcattctt-tttatcataaatgtaaagtataatatgttgaattggaagtggtgaaagtagtattaattagagttataatt 43525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 4631160 - 4631086
Alignment:
Q  476 tactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||| ||| ||||||||||||||||| |||||  | ||||||||||||||||||||| ||||||||||||||||    
T  4631160 tactccctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatacaatgattaaaagaaa 4631086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 465
Target Start/End: Original strand, 5357850 - 5357928
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||| ||| ||||||||| |||||||||| |||||||||    
T  5357850 cattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtaatattaattagagttataatt 5357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 6173022 - 6173092
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||  ||||||||||    
T  6173022 ttatcataaatgcaaagtataatatattgaattgtgagtgatgaaagtagtattaattatagttataattg 6173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 455
Target Start/End: Complemental strand, 792052 - 791983
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    |||||| ||||||| |||||||||||||| |||||||||||||  |||| ||||||||||||||||||||    
T  792052 gcattcctctttattataaatgcaaaatagaatatattgaattatgagtggtgaaagtagtattaattag 791983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 466
Target Start/End: Complemental strand, 4194684 - 4194636
Alignment:
Q  418 tatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4194684 tatattgaattgggagtggtgaaagtagtattaattagtgttataattg 4194636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 550
Target Start/End: Complemental strand, 32158774 - 32158698
Alignment:
Q  474 aatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||| || ||||| |||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||    
T  32158774 aatactccctttgttttaaaatgagtgtcgttttaggggtttacacacatattaagaaatgcaatgattaaaagaaa 32158698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 42818979 - 42818900
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || ||||||||||| || |||| |||||| ||||||||||||| ||||||||||    
T  42818979 gcattcttctttatcataaatgtaaagtagaatatattgaa-tgagagtggtgaaaatagtattaattagagttataattg 42818900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 10044744 - 10044665
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||| ||||||||||||| ||| || | |||||||| ||| |||||||||||||| |||||||||| |||||||||    
T  10044744 gcattcttttttatcataaatgtaaagtaaagtatattgatttgagagttgtgaaagtaatattaattagagttataatt 10044665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 16926123 - 16926204
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||| ||||| ||| | |||||||||||||    
T  16926123 gcattcttctttatcataaatggaaagtagaatatattgaattggaagttgtgaaagt-gtatt-atttgagttataattggaa 16926204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 7871383 - 7871310
Alignment:
Q  392 ttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||| ||| || |||||||| |||||| ||| ||||||||||||||||||||| |||||||||    
T  7871383 ttctttatcataaatgtaaagtagaatatattaaattgg-agtggtgaaagtagtattaattagtattataattg 7871310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 8369739 - 8369805
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||  |||||||||||||||||||||||| |||||||    
T  8369739 tatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 8369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 8692861 - 8692927
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||||||||||  |||||||| |||||| ||||||||||||| |||||||||| |||||||    
T  8692861 tatcataaatgcaaaatgaaatatattaaattggaagttgtgaaagtaatattaattagagttataa 8692927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 35334569 - 35334635
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  35334569 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataa 35334635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 35646132 - 35646198
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||| | |||||||||||||||||||||||| |||||||    
T  35646132 tatcataaatgcaaagtggaatatattgaattagaagttgtgaaagtagtattaattagagttataa 35646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 36469137 - 36469215
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||||||| ||||||||||||||||   |||  |||||||||||||||||||  |||||||| |||||||||    
T  36469137 tatcataaatgcaaagtataatatattgaattaaaagtgatgaaagtagtattaattagaattataattagaagaaaaa 36469215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 42575681 - 42575747
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||||  |||||||    
T  42575681 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtattaattaaagttataa 42575747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 16883973 - 16884042
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||| ||| || ||||||||||||| || || |||||||||||||||||||| |||||||||    
T  16883973 ttatcataaatgtaaagtaaaatatattgaattaggggtggtgaaagtagtattaattagagttataatt 16884042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 858410 - 858334
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||| | ||||||||||||||||||  |||||||| ||||| ||||  ||||||||||||||||||| |||||||    
T  858410 cattctccattatcataaatgcaaaatgaaatatatttaattgagagtgatgaaagtagtattaattagagttataa 858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 454
Target Start/End: Original strand, 4044509 - 4044577
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||||||||||||| ||| || |||||||||||||||| || |||||| || |||||||||    
T  4044509 gcattcttctttatcataaatgtaaagtagaatatattgaattgggtgtggtgaaaatattattaatta 4044577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 25362734 - 25362797
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||||| || |||||  | ||||||||||||||||||||||||||||||||||||||    
T  25362734 gtttcaaaatgagt-tcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaa 25362797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 476
Target Start/End: Complemental strand, 41268404 - 41268324
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaat 476  Q
    |||||||| ||||||| ||| |||||||||||| |||||  |||||||| |||||||||  ||||||||||||| ||||||    
T  41268404 ttatcatatatgcaaattatgatatattgaatttggagtgatgaaagtaatattaattatagttataattggaaaaaaaat 41268324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 72147 - 72218
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgg 467  Q
    |||||||||||||||| || |||||||| |||| |||||  |||||||||||||||||||  ||||||||||    
T  72147 ttatcataaatgcaaagtagaatatattaaattaggagtgatgaaagtagtattaattagatttataattgg 72218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 550
Target Start/End: Complemental strand, 7317248 - 7317184
Alignment:
Q  482 ctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||||||| ||||| || ||||||||    ||||||||||||||||||||||||||    
T  7317248 ctctgtttcaaaatgagtgtcgttttagatgtttacaca----ttaagaaatgcaatgattaaaagaaa 7317184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 476
Target Start/End: Complemental strand, 17699398 - 17699319
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaat 476  Q
    ||||||||||| ||  ||||||||||||||||| ||||  ||||||||||||||||||  |||||||||| || ||||||    
T  17699398 tatcataaatgtaaggtataatatattgaattgagagtaatgaaagtagtattaattaaagttataattgaaaaaaaaat 17699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 19889574 - 19889645
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||| ||| || ||||||||||||||  ||| ||||||||| |||||||||| ||||||||||    
T  19889574 tttatcataaatgtaaagtagaatatattgaattgaaagtggtgaaagtaatattaattagagttataattg 19889645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 5073016 - 5072946
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||| ||| || ||||||||||||||||||   || |||||||||||||||| ||||||||||    
T  5073016 ttatcataaatgtaaagtaaaatatattgaattgggagcaatggaagtagtattaattagagttataattg 5072946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 11099520 - 11099586
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||||| |||| |  |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  11099520 tatcataaatacaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataa 11099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 17242997 - 17243063
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||||||||||||||||| |||||||    
T  17242997 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaattagagttataa 17243063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 22582915 - 22582980
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  || |||||||||||| |||||||||||||||||||||||| |||||||    
T  22582915 tatcataaatgcaaagtggaa-atattgaattggaagttgtgaaagtagtattaattagagttataa 22582980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 32539727 - 32539649
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||||| |||||| |||||||| ||| || |||  ||||| ||||||||||||| ||||||||| |||||||||    
T  32539727 tatcataaatgtaaaataaaatatattaaatcggaagtgatgaaaatagtattaattagagttataattagaagaaaaa 32539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 36446730 - 36446788
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattag 455  Q
    ||||||||||||||| |||||||||||||||||  |||  |||||||||||||||||||    
T  36446730 tatcataaatgcaaagtataatatattgaattgaaagtgatgaaagtagtattaattag 36446788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 35988700 - 35988631
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||||||||||| |  ||||||||||||||||||| ||||||||  |||||||||  |||||||||    
T  35988700 ttatcataaatgcaaagttgaatatattgaattgggagtggtgaaagtgatattaattaaagttataatt 35988631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 39183670 - 39183739
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||||| |  |||||||||||||| ||||  |||||||| |||||||||| ||||||||||    
T  39183670 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataattg 39183739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 1309281 - 1309345
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||||||||||| |||||||| |  | |||||||||||||||||||||||| | |||||||||||    
T  1309281 gtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatgcattaattaaaagaaa 1309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 11977818 - 11977754
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||||| ||| |  | |||||||||||||||||||||||| | |||||||||||    
T  11977818 gtttcaaaatgagtgtcgtttaagctttttacacacatattaagaaatgcattaattaaaagaaa 11977754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 550
Target Start/End: Original strand, 4911029 - 4911096
Alignment:
Q  483 tctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||||||| |||||||| |  | ||||||||||||||||||||| || | |||||||||||    
T  4911029 tctgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatacattaattaaaagaaa 4911096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 513 - 568
Target Start/End: Original strand, 43584336 - 43584389
Alignment:
Q  513 tttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  43584336 tttacacacatattaagaaatacaatgattaaaag-aaagag-aatgattatttta 43584389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 5147528 - 5147570
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaatt 428  Q
    |||||||||||||||||||||||||| || |||||||||||||    
T  5147528 gcattcttctttatcataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 15564929 - 15564991
Alignment:
Q  395 tttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtg 457  Q
    ||||||||||||||||| || |||||||| ||||| ||||  |||||||| ||||||||||||    
T  15564929 tttatcataaatgcaaagtagaatatattaaattgagagtgatgaaagtaatattaattagtg 15564991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 39008193 - 39008128
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| |  ||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  39008193 tatcataaatgtaaagtgaaatatattgaattggaagtt-tgaaagtagtattaattagagttataa 39008128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 39060455 - 39060513
Alignment:
Q  387 cattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtag 445  Q
    ||||||||||||||||||||||||| || | ||||||| ||||| ||| ||||||||||    
T  39060455 cattcttctttatcataaatgcaaagtagactatattgtattggaagtggtgaaagtag 39060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 42211398 - 42211332
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||||||||||||||| | |||||||    
T  42211398 tatcataaatgcaaagtgaaatatattgaattgtgagtgatgaaagtagtattaatttgagttataa 42211332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 16954940 - 16954880
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||| | ||||||| ||||||    
T  16954940 gcattctt-tttatcataaatgtaaaatagaatatattgaattggaaattgtgaatgtagta 16954880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 39035887 - 39035964
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||| |||||||||||| | |||| |  |||||||| ||||| |||| || |||||||| ||||||||||||||||    
T  39035887 gcattcctctttatcataactacaaagtgaaatatattaaattgagagtggtaaaagtagttttaattagtgttataa 39035964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 13974504 - 13974440
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaa 550  Q
    |||| ||||||| |||| ||| | || |||||||||||||||||||||||| | |||||||||||    
T  13974504 gttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaa 13974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 15254830 - 15254762
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||| |||||||| || ||||||||||||||  |||  |||||||| |||||||||| |||||||||    
T  15254830 tatcattaatgcaaattagaatatattgaattgaaagtgatgaaagtaatattaattagagttataatt 15254762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 16283630 - 16283698
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||||||| || |||||| |||||||||    
T  16283630 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagcatcaattagagttataatt 16283698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 32659882 - 32659814
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    |||| ||||||||||| ||||||||||||||||| || | || |||||| |||| ||||| ||||||||    
T  32659882 ttattataaatgcaaagtataatatattgaattgagactggtaaaagtaatatttattagagttataat 32659814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 21634344 - 21634281
Alignment:
Q  483 tctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaa 546  Q
    ||||||| ||||||| |||| ||| || | |||||||||||||||||||||||| | |||||||    
T  21634344 tctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaa 21634281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 21642591 - 21642528
Alignment:
Q  483 tctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaa 546  Q
    ||||||| ||||||| |||| ||| || | |||||||||||||||||||||||| | |||||||    
T  21642591 tctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaa 21642528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 35765831 - 35765897
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatatt--aagaaatgcaatgattaaaagaaa 550  Q
    ||||||||||| ||||| |||||  | ||||||||||||||  || |||||||||||||||||||||    
T  35765831 gtttcaaaatgggtgtcgttttaggtgtttacacacatattaaaaaaaatgcaatgattaaaagaaa 35765897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 13135818 - 13135752
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||| |  ||||||||||||| |||||  ||||||||||| ||||||  |||||||    
T  13135818 tatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtagtaattaaagttataa 13135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 25344780 - 25344838
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaatta 454  Q
    |||||||||||| ||| || |||||||||||||| || |  ||||||||||||||||||    
T  25344780 ttatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaatta 25344838  T

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Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 33988265 - 33988199
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||| ||| |  |||||||||||||||||||  |||||||| ||| |||||| |||||||    
T  33988265 tatcataaatgtaaagtggaatatattgaattgggagtaatgaaagtaatatgaattagagttataa 33988199  T

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Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 146748 - 146805
Alignment:
Q  402 taaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgtt 459  Q
    |||||||||| || |||||||||||||| ||||  | ||||||||||||| |||||||    
T  146748 taaatgcaaagtagaatatattgaattgagagtgataaaagtagtattaagtagtgtt 146805  T

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Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 551
Target Start/End: Complemental strand, 4631077 - 4631048
Alignment:
Q  522 atattaagaaatgcaatgattaaaagaaaa 551  Q
    ||||||||||||||||||||||||||||||    
T  4631077 atattaagaaatgcaatgattaaaagaaaa 4631048  T

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Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 20189968 - 20189891
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||| | |||||||||||| ||| |  |||||||||||||| || |  |||||||| |||||||||| |||||||    
T  20189968 gcattctccattatcataaatgtaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataa 20189891  T

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Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 31196395 - 31196334
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    ||||| |||||||| ||| ||||||| || ||||||||| |||| |||| ||||||||||||    
T  31196395 gcatttttctttattatacatgcaaagtagaatatattggattgagagtggtgaaagtagta 31196334  T

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Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 6629424 - 6629504
Alignment:
Q  386 gcattcttctttatcataaatgcaaaat-ataatatattgaattgggagttgtgaaagtagtattaattagtgttataatt 465  Q
    |||||||| ||||| ||||||||||| |   |||||||| ||||||||||  ||||||||  ||||||||| |||||||||    
T  6629424 gcattcttttttattataaatgcaaagtggaaatatattaaattgggagtgatgaaagtaaaattaattagagttataatt 6629504  T

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Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 11970424 - 11970376
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatg 534  Q
    |||| |||||||||||||||| | || |||||||||| |||||||||||    
T  11970424 gttttaaaatgagtgtcatttaagatttttacacacaaattaagaaatg 11970376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 17741211 - 17741285
Alignment:
Q  395 tttatcataaatgcaaaatataata---tattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    ||||||||||||| ||| |||||||   |||||||||| ||||  |||||||| |||||||||  ||||||||||    
T  17741211 tttatcataaatgtaaagtataatatagtattgaattgagagtgatgaaagtaatattaattatagttataattg 17741285  T

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Target: scaffold0003 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 352492 - 352575
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||    
T  352492 gcattcttctttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagtaatattaaatagagttataattggaa 352575  T

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Target: scaffold0685 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 6431 - 6511
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||||||||||||| ||| || |||||||||||||| |||| ||||||||| |||||||||| ||||||||||    
T  6431 gcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaattagagttataattg 6511  T

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Target: scaffold0007 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 230322 - 230255
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  230322 ttatcataaatgcaaaatggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 230255  T

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Target: scaffold0332 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 3743 - 3823
Alignment:
Q  486 gtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaagagaaatgattatttta 568  Q
    |||| |||||||||||| |||||  |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  3743 gttttaaaatgagtgtcgttttaggtctttacacacataataagaaatgcaatgattaaaag-aaaga-aaatgattatttta 3823  T

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Target: scaffold0155 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 7992 - 8066
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattgg 467  Q
    ||||||||||||||| ||| || |||||||||||||| || |||||||||||||||||||||  |||||||||||    
T  7992 tctttatcataaatgtaaagtaaaatatattgaattgagaattgtgaaagtagtattaattaaagttataattgg 8066  T

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Target: scaffold0006 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 229899 - 229822
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    ||||||| | |||||||||||||||| |   |||||||||||||| |||||||||||||||||||||||| |||||||    
T  229899 gcattctccattatcataaatgcaaagtggtatatattgaattggaagttgtgaaagtagtattaattagagttataa 229822  T

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Target: scaffold0086 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 469
Target Start/End: Complemental strand, 5887 - 5811
Alignment:
Q  393 tctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||||||||  ||||||| |||||    
T  5887 tctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattaaagttataaatggaa 5811  T

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Target: scaffold0262 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 464
Target Start/End: Original strand, 12467 - 12545
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataat 464  Q
    |||||||||||||| ||||||| ||| || |||||||||||||  || | |||||||||||||||||||| ||||||||    
T  12467 gcattcttctttattataaatgtaaagtagaatatattgaattaagaatggtgaaagtagtattaattagagttataat 12545  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 220065 - 220011
Alignment:
Q  390 tcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagta 444  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  220065 tcttctttatcataaatgcaaaatagaatatattgaattgagagtggtgaaagta 220011  T

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Target: scaffold0565 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 551
Target Start/End: Original strand, 9866 - 9942
Alignment:
Q  475 atactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgcaatgattaaaagaaaa 551  Q
    |||||| |||||||||||||||| |||| ||| || | |||||||| ||||||| ||||||| | ||||||||||||    
T  9866 atactcgctctgtttcaaaatgaatgtcgtttaaagtttttacacatatattaaaaaatgcattaattaaaagaaaa 9942  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 26678 - 26606
Alignment:
Q  397 tatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaa 469  Q
    ||||||||||||||| |  |||||||||||||| ||||  |||||||||||||||||||  |||||| |||||    
T  26678 tatcataaatgcaaagtggaatatattgaattgcgagtgatgaaagtagtattaattagaattataaatggaa 26606  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 463
Target Start/End: Complemental strand, 394852 - 394777
Alignment:
Q  388 attcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataa 463  Q
    |||||||| |||||||||| |||| |  |||||| ||||||| ||||  ||||||||||||||||||| |||||||    
T  394852 attcttctctatcataaatacaaagtggaatatagtgaattgagagtgatgaaagtagtattaattagagttataa 394777  T

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Target: scaffold0654 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 475
Target Start/End: Original strand, 2709 - 2778
Alignment:
Q  406 tgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattggaagaaaaa 475  Q
    ||||||||| ||||| |||||||| ||||  ||||| ||||||||||||| |||||||||| || |||||    
T  2709 tgcaaaatagaatatgttgaattgagagtgatgaaattagtattaattagagttataattgaaaaaaaaa 2778  T

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Target: scaffold0576 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 641 - 580
Alignment:
Q  386 gcattcttctttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagta 447  Q
    ||||||||||||||||||||| |||| || |||||| ||||||| ||||  |||||||||||    
T  641 gcattcttctttatcataaatccaaagtagaatataatgaattgagagtgttgaaagtagta 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 4806 - 4743
Alignment:
Q  473 aaatactctctctgtttcaaaatgagtgtcattttaaatctttacacacatattaagaaatgca 536  Q
    |||| ||||||| |||| ||||| | |||| ||| |||| ||||||||||||||||||||||||    
T  4806 aaatgctctctccgttttaaaataaatgtcgtttaaaatttttacacacatattaagaaatgca 4743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 171292 - 171222
Alignment:
Q  396 ttatcataaatgcaaaatataatatattgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||||||||| ||| || ||||||||||||| |||||  |||||||| |||||||  | ||||||||||    
T  171292 ttatcataaatgtaaagtagaatatattgaattaggagtgatgaaagtaatattaatatgagttataattg 171222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 466
Target Start/End: Complemental strand, 4069 - 4025
Alignment:
Q  422 ttgaattgggagttgtgaaagtagtattaattagtgttataattg 466  Q
    |||||| ||||||  ||||||||||||||||||| ||||||||||    
T  4069 ttgaatcgggagtgatgaaagtagtattaattagagttataattg 4025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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