View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0765_low_16 (Length: 310)
Name: NF0765_low_16
Description: NF0765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0765_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 48 - 303
Target Start/End: Complemental strand, 23905546 - 23905291
Alignment:
| Q |
48 |
aatgaggtaagctcaattgcagtatattcattcgattgaaaatttattaacaatcttgcatttttataaagaactacaatctatttgcacaatgaggtgt |
147 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23905546 |
aatgaggtaagctcaattgtagtatattcattcgattgaaaatttattaacaatcttgcatttttataaagaactacaatctatttgcacaatgaggtgt |
23905447 |
T |
|
| Q |
148 |
tgtccctaacagaaagctgtgcactactcatttatgagtctttcaatatcttcattatcttacataattggtttgtgagggtctcgtattcatagttgtc |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23905446 |
tgtccctaacagaaagctgtgcactactcatttatgagtctttcaatatcttcattatcttacataattggtttgtgagggtctcgtattcatagttgtc |
23905347 |
T |
|
| Q |
248 |
acaaaatggttttacatagttcccttattctttgttttgtgggttttcctttgctt |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23905346 |
acaaaatggttttacatagttcccttattctttgttttgtgggttttcctttgctt |
23905291 |
T |
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