View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0765_low_23 (Length: 280)
Name: NF0765_low_23
Description: NF0765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0765_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 31587150 - 31587331
Alignment:
| Q |
1 |
tccctcaaaacaacccaccagtcttctcccaacccaactccaccatggctcacaaaaaatccatcttctcccaaaagggtcactgaatctcctatcaatg |
100 |
Q |
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| T |
31587150 |
tccctcaaaacaacccaccagtcttctcccaacccaactccaccatggctcacaaaaaatccatcttctcccaaaagggtcactgaatctcctatcaaag |
31587249 |
T |
|
| Q |
101 |
atgacccttttcaaccacagcctcaaaaacccaaaaatcctgttgaaagaatcgtttttaggttaagaaacctaggtttagt |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31587250 |
atgacccttttcaaccacagcctcaaaaacccaaaaatcctgttgaaagaatcgtttttaggttaagaaacctaggtttagt |
31587331 |
T |
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