View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0766_low_10 (Length: 479)

Name: NF0766_low_10
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0766_low_10
NF0766_low_10
[»] chr5 (44 HSPs)
chr5 (283-479)||(41092992-41093189)
chr5 (30-160)||(41100569-41100696)
chr5 (283-473)||(43394881-43395072)
chr5 (283-479)||(16528945-16529138)
chr5 (293-446)||(7127555-7127708)
chr5 (286-435)||(41092859-41093006)
chr5 (293-473)||(26523089-26523269)
chr5 (283-469)||(35159690-35159875)
chr5 (286-479)||(16528589-16528780)
chr5 (297-440)||(12442115-12442258)
chr5 (283-479)||(16528763-16528962)
chr5 (302-479)||(11313807-11313982)
chr5 (293-446)||(19121903-19122056)
chr5 (283-460)||(11313965-11314144)
chr5 (291-446)||(24351428-24351583)
chr5 (283-389)||(26523269-26523375)
chr5 (283-389)||(16529121-16529227)
chr5 (293-389)||(19122239-19122335)
chr5 (292-479)||(7673142-7673330)
chr5 (296-473)||(13035130-13035310)
chr5 (296-473)||(13105104-13105285)
chr5 (291-435)||(31487052-31487195)
chr5 (292-479)||(35159414-35159602)
chr5 (292-389)||(11313635-11313732)
chr5 (293-397)||(9488075-9488179)
chr5 (290-389)||(16526190-16526290)
chr5 (293-473)||(10409521-10409700)
chr5 (326-446)||(24350875-24350995)
chr5 (292-479)||(26523358-26523547)
chr5 (292-388)||(23138027-23138122)
chr5 (297-446)||(31486792-31486941)
chr5 (293-385)||(16305344-16305434)
chr5 (320-381)||(24326548-24326609)
chr5 (320-381)||(24350732-24350793)
chr5 (320-381)||(24351286-24351347)
chr5 (292-473)||(38004597-38004774)
chr5 (326-479)||(43395055-43395207)
chr5 (297-389)||(14166196-14166289)
chr5 (286-340)||(7673102-7673156)
chr5 (408-460)||(16528532-16528584)
chr5 (297-340)||(38268880-38268923)
chr5 (408-446)||(9487798-9487836)
chr5 (289-338)||(14854324-14854373)
chr5 (292-345)||(22431580-22431633)
[»] chr4 (53 HSPs)
chr4 (296-479)||(47631359-47631542)
chr4 (283-479)||(48076354-48076548)
chr4 (284-473)||(36639332-36639522)
chr4 (293-473)||(24049561-24049740)
chr4 (290-477)||(48076183-48076369)
chr4 (291-473)||(52689549-52689730)
chr4 (292-440)||(28379725-28379872)
chr4 (294-446)||(36639169-36639321)
chr4 (292-473)||(47768947-47769129)
chr4 (283-397)||(43161746-43161860)
chr4 (296-479)||(21585481-21585663)
chr4 (286-389)||(47631528-47631630)
chr4 (294-446)||(54653606-54653758)
chr4 (292-435)||(7821514-7821657)
chr4 (292-473)||(8397675-8397853)
chr4 (295-473)||(7821301-7821478)
chr4 (293-397)||(53144851-53144955)
chr4 (296-473)||(12796048-12796227)
chr4 (294-473)||(23952434-23952613)
chr4 (292-473)||(22292893-22293070)
chr4 (296-479)||(23952706-23952887)
chr4 (292-389)||(28379986-28380082)
chr4 (292-389)||(44500667-44500764)
chr4 (291-395)||(7796779-7796883)
chr4 (283-389)||(48076531-48076637)
chr4 (297-435)||(2177264-2177402)
chr4 (297-435)||(4941678-4941816)
chr4 (328-473)||(21581206-21581351)
chr4 (292-446)||(28813220-28813374)
chr4 (297-423)||(7809348-7809474)
chr4 (308-434)||(8118608-8118734)
chr4 (291-397)||(8118377-8118481)
chr4 (295-389)||(29967177-29967271)
chr4 (297-441)||(2481613-2481754)
chr4 (307-389)||(22292701-22292783)
chr4 (297-389)||(28389785-28389877)
chr4 (326-473)||(7809561-7809708)
chr4 (294-389)||(8079295-8079387)
chr4 (290-355)||(24046058-24046123)
chr4 (290-368)||(15456285-15456363)
chr4 (290-368)||(15463669-15463747)
chr4 (347-473)||(8479075-8479198)
chr4 (351-473)||(24049337-24049459)
chr4 (297-385)||(32010701-32010789)
chr4 (325-389)||(43161939-43162003)
chr4 (360-397)||(41852151-41852188)
chr4 (283-314)||(21585467-21585498)
chr4 (408-446)||(28380144-28380182)
chr4 (296-345)||(2526940-2526989)
chr4 (297-389)||(8079018-8079111)
chr4 (411-479)||(43161843-43161914)
chr4 (320-446)||(47428372-47428498)
chr4 (286-338)||(47428306-47428358)
[»] chr3 (39 HSPs)
chr3 (283-472)||(46451456-46451643)
chr3 (294-473)||(18094953-18095132)
chr3 (301-473)||(37760501-37760673)
chr3 (294-446)||(47503010-47503162)
chr3 (293-479)||(11454201-11454384)
chr3 (293-473)||(36643057-36643237)
chr3 (292-395)||(38887373-38887476)
chr3 (292-435)||(837171-837314)
chr3 (283-479)||(11454367-11454565)
chr3 (292-446)||(40050845-40050998)
chr3 (283-389)||(11454548-11454655)
chr3 (297-473)||(35560101-35560280)
chr3 (292-397)||(43017266-43017371)
chr3 (293-389)||(18094737-18094833)
chr3 (297-446)||(53047545-53047693)
chr3 (291-446)||(47503183-47503339)
chr3 (292-473)||(11522527-11522709)
chr3 (296-446)||(20877173-20877323)
chr3 (292-389)||(38887592-38887691)
chr3 (293-389)||(38887809-38887905)
chr3 (291-397)||(45514425-45514530)
chr3 (301-386)||(47519871-47519956)
chr3 (293-389)||(16015264-16015360)
chr3 (291-397)||(24365735-24365834)
chr3 (293-389)||(11453933-11454030)
chr3 (334-438)||(46451320-46451425)
chr3 (326-386)||(47519955-47520015)
chr3 (327-389)||(51654074-51654136)
chr3 (299-441)||(43819330-43819472)
chr3 (300-446)||(11220780-11220925)
chr3 (352-390)||(54274787-54274825)
chr3 (293-440)||(3847821-3847960)
chr3 (283-340)||(46451238-46451295)
chr3 (325-397)||(850960-851032)
chr3 (293-479)||(46451074-46451255)
chr3 (291-446)||(21968965-21969118)
chr3 (291-446)||(21991401-21991554)
chr3 (333-436)||(52300747-52300850)
chr3 (408-441)||(20876974-20877007)
[»] chr7 (52 HSPs)
chr7 (293-479)||(9142063-9142242)
chr7 (292-446)||(23591370-23591524)
chr7 (293-473)||(18486630-18486808)
chr7 (293-473)||(4680828-4681005)
chr7 (290-397)||(9141966-9142073)
chr7 (291-473)||(27716461-27716642)
chr7 (295-473)||(45419565-45419743)
chr7 (292-441)||(48640761-48640911)
chr7 (293-446)||(12140817-12140970)
chr7 (293-473)||(40450031-40450210)
chr7 (292-440)||(11649971-11650118)
chr7 (283-446)||(48640972-48641135)
chr7 (297-446)||(16671605-16671754)
chr7 (297-446)||(17645973-17646122)
chr7 (293-473)||(23591560-23591740)
chr7 (291-446)||(22324278-22324433)
chr7 (297-446)||(2526909-2527059)
chr7 (291-395)||(11645938-11646042)
chr7 (290-446)||(11646353-11646509)
chr7 (290-389)||(27716322-27716421)
chr7 (298-473)||(45419771-45419947)
chr7 (293-432)||(16492515-16492653)
chr7 (326-441)||(18487180-18487295)
chr7 (292-397)||(21224133-21224238)
chr7 (292-473)||(16671241-16671422)
chr7 (292-473)||(17645609-17645790)
chr7 (291-397)||(22773916-22774021)
chr7 (293-435)||(35124721-35124863)
chr7 (289-389)||(2354678-2354778)
chr7 (291-473)||(2853143-2853329)
chr7 (296-447)||(34837441-34837591)
chr7 (290-375)||(11646620-11646705)
chr7 (293-389)||(34837183-34837280)
chr7 (297-397)||(48641447-48641546)
chr7 (293-380)||(32278158-32278245)
chr7 (292-389)||(19222100-19222198)
chr7 (299-446)||(11646166-11646312)
chr7 (293-389)||(46264296-46264393)
chr7 (320-385)||(4681162-4681227)
chr7 (293-389)||(21128036-21128132)
chr7 (290-389)||(30991452-30991552)
chr7 (320-397)||(1566513-1566591)
chr7 (304-473)||(16362620-16362788)
chr7 (329-389)||(43059223-43059283)
chr7 (296-397)||(4681603-4681700)
chr7 (292-363)||(23591238-23591309)
chr7 (291-389)||(4454918-4455016)
chr7 (351-389)||(40686905-40686943)
chr7 (292-340)||(34837383-34837431)
chr7 (292-340)||(34837650-34837698)
chr7 (408-473)||(27712564-27712630)
chr7 (293-338)||(4455363-4455408)
[»] chr2 (41 HSPs)
chr2 (292-441)||(28612195-28612344)
chr2 (324-479)||(5001624-5001778)
chr2 (292-471)||(44256468-44256647)
chr2 (296-446)||(28611978-28612128)
chr2 (290-435)||(11735903-11736047)
chr2 (291-446)||(41995710-41995865)
chr2 (286-479)||(5001447-5001638)
chr2 (292-446)||(28611765-28611919)
chr2 (292-446)||(28612614-28612766)
chr2 (294-446)||(10129454-10129606)
chr2 (292-446)||(28612403-28612556)
chr2 (291-473)||(6348066-6348246)
chr2 (283-470)||(29550119-29550311)
chr2 (293-473)||(37131418-37131597)
chr2 (283-385)||(44543733-44543835)
chr2 (291-388)||(627531-627628)
chr2 (283-389)||(29549944-29550050)
chr2 (342-479)||(6347938-6348075)
chr2 (293-446)||(28612825-28612979)
chr2 (293-446)||(3249756-3249909)
chr2 (347-479)||(5001296-5001430)
chr2 (325-446)||(11736329-11736450)
chr2 (298-389)||(5013210-5013301)
chr2 (291-435)||(29549785-29549929)
chr2 (292-435)||(3249550-3249693)
chr2 (300-435)||(41326372-41326507)
chr2 (347-479)||(5012966-5013100)
chr2 (293-389)||(12898019-12898115)
chr2 (350-446)||(627629-627725)
chr2 (371-479)||(44543606-44543714)
chr2 (292-385)||(44543944-44544037)
chr2 (296-385)||(12896444-12896533)
chr2 (296-368)||(2132238-2132310)
chr2 (360-441)||(20708899-20708980)
chr2 (328-473)||(11657483-11657623)
chr2 (283-332)||(44543574-44543623)
chr2 (283-328)||(5001268-5001313)
chr2 (283-328)||(5012938-5012983)
chr2 (283-311)||(5001436-5001464)
chr2 (283-311)||(5013106-5013134)
chr2 (408-479)||(5013117-5013186)
[»] chr1 (51 HSPs)
chr1 (293-473)||(318551-318730)
chr1 (283-479)||(51113892-51114093)
chr1 (283-479)||(42497214-42497411)
chr1 (291-473)||(5428522-5428704)
chr1 (294-473)||(1155991-1156174)
chr1 (291-473)||(1647537-1647719)
chr1 (290-473)||(42492089-42492278)
chr1 (297-473)||(21617756-21617931)
chr1 (293-473)||(38684011-38684194)
chr1 (293-479)||(51113719-51113909)
chr1 (296-446)||(44263088-44263238)
chr1 (286-473)||(27296326-27296510)
chr1 (292-435)||(16165653-16165797)
chr1 (283-389)||(51114076-51114182)
chr1 (292-473)||(3227153-3227333)
chr1 (293-479)||(27296158-27296340)
chr1 (290-389)||(44263303-44263402)
chr1 (283-389)||(42496947-42497053)
chr1 (283-389)||(5428919-5429025)
chr1 (295-385)||(51272510-51272600)
chr1 (293-446)||(52740696-52740850)
chr1 (293-389)||(5429044-5429144)
chr1 (283-374)||(28950016-28950107)
chr1 (299-479)||(28950090-28950274)
chr1 (326-473)||(44099602-44099747)
chr1 (292-389)||(44262659-44262756)
chr1 (294-385)||(28950277-28950368)
chr1 (305-446)||(4100749-4100890)
chr1 (301-389)||(6537669-6537757)
chr1 (351-473)||(12115359-12115482)
chr1 (296-446)||(18912326-18912477)
chr1 (296-479)||(42497394-42497575)
chr1 (298-447)||(4100543-4100691)
chr1 (286-385)||(24595224-24595316)
chr1 (325-479)||(24595086-24595238)
chr1 (294-388)||(33375627-33375721)
chr1 (283-381)||(42497133-42497231)
chr1 (299-395)||(28949900-28949995)
chr1 (329-441)||(52584966-52585078)
chr1 (297-397)||(18912215-18912316)
chr1 (292-441)||(43761941-43762091)
chr1 (292-368)||(6537465-6537541)
chr1 (348-473)||(45417531-45417655)
chr1 (292-382)||(30083973-30084064)
chr1 (408-479)||(42492332-42492403)
chr1 (408-473)||(24595324-24595388)
chr1 (283-352)||(42492280-42492349)
chr1 (293-337)||(47790692-47790736)
chr1 (296-337)||(52740914-52740955)
chr1 (409-473)||(21618069-21618133)
chr1 (293-345)||(48552993-48553045)
[»] chr6 (27 HSPs)
chr6 (295-473)||(25068186-25068366)
chr6 (293-479)||(25067958-25068143)
chr6 (290-446)||(17202843-17202999)
chr6 (291-446)||(17201591-17201746)
chr6 (293-441)||(17906763-17906910)
chr6 (297-473)||(9828919-9829096)
chr6 (286-394)||(23622207-23622315)
chr6 (293-389)||(27579594-27579690)
chr6 (291-435)||(23610426-23610570)
chr6 (293-441)||(4811023-4811172)
chr6 (286-389)||(32208421-32208524)
chr6 (297-397)||(808829-808930)
chr6 (293-434)||(26832485-26832626)
chr6 (297-389)||(27315287-27315378)
chr6 (293-460)||(4100258-4100428)
chr6 (293-381)||(808468-808556)
chr6 (347-446)||(17202681-17202780)
chr6 (293-446)||(17199982-17200134)
chr6 (292-363)||(29201553-29201624)
chr6 (296-389)||(15130898-15130991)
chr6 (283-340)||(25068126-25068183)
chr6 (293-340)||(4125712-4125759)
chr6 (290-338)||(17201809-17201857)
chr6 (291-354)||(808687-808749)
chr6 (292-338)||(24223222-24223268)
chr6 (372-446)||(29201621-29201695)
chr6 (293-389)||(17080031-17080127)
[»] chr8 (52 HSPs)
chr8 (292-473)||(1197873-1198053)
chr8 (291-479)||(37198223-37198410)
chr8 (293-389)||(23830959-23831055)
chr8 (290-473)||(23960509-23960694)
chr8 (283-479)||(37197831-37198032)
chr8 (292-446)||(3459092-3459246)
chr8 (292-389)||(13797437-13797534)
chr8 (296-389)||(23828141-23828234)
chr8 (296-435)||(29580007-29580145)
chr8 (299-479)||(39922013-39922192)
chr8 (300-435)||(27853638-27853773)
chr8 (293-435)||(30439011-30439155)
chr8 (297-385)||(23085860-23085948)
chr8 (293-397)||(37410078-37410182)
chr8 (325-446)||(38111372-38111493)
chr8 (293-397)||(32062811-32062917)
chr8 (294-446)||(44429047-44429198)
chr8 (297-389)||(23838356-23838449)
chr8 (293-430)||(40399467-40399604)
chr8 (325-446)||(34947504-34947624)
chr8 (296-389)||(35617680-35617774)
chr8 (293-366)||(23838173-23838246)
chr8 (292-389)||(23960814-23960910)
chr8 (283-440)||(604639-604795)
chr8 (290-385)||(37198131-37198227)
chr8 (291-440)||(33198827-33198975)
chr8 (297-473)||(37197607-37197783)
chr8 (293-441)||(33198599-33198745)
chr8 (283-389)||(44429210-44429316)
chr8 (283-353)||(39921960-39922030)
chr8 (293-397)||(43419036-43419136)
chr8 (283-389)||(44430053-44430159)
chr8 (283-389)||(44433788-44433894)
chr8 (329-389)||(18308259-18308319)
chr8 (283-435)||(44430404-44430557)
chr8 (283-435)||(44433962-44434115)
chr8 (292-435)||(2084871-2085015)
chr8 (283-479)||(44430227-44430421)
chr8 (291-435)||(44433623-44433767)
chr8 (291-389)||(37426110-37426208)
chr8 (283-340)||(37197791-37197848)
chr8 (352-445)||(1276481-1276574)
chr8 (283-367)||(44434139-44434223)
chr8 (283-397)||(604508-604623)
chr8 (293-397)||(42045633-42045737)
chr8 (291-435)||(44429888-44430032)
chr8 (366-473)||(38111190-38111297)
chr8 (283-386)||(604344-604448)
chr8 (293-345)||(34345140-34345192)
chr8 (283-386)||(44429383-44429485)
chr8 (351-437)||(604813-604899)
chr8 (292-340)||(39922229-39922277)
[»] scaffold0018 (1 HSPs)
scaffold0018 (291-473)||(163731-163914)
[»] scaffold0294 (1 HSPs)
scaffold0294 (293-389)||(12399-12495)
[»] scaffold0320 (1 HSPs)
scaffold0320 (293-472)||(14512-14690)
[»] scaffold0240 (2 HSPs)
scaffold0240 (293-479)||(13088-13278)
scaffold0240 (331-435)||(13285-13389)
[»] scaffold0013 (1 HSPs)
scaffold0013 (290-446)||(102698-102852)
[»] scaffold0504 (1 HSPs)
scaffold0504 (296-385)||(1551-1641)
[»] scaffold0097 (1 HSPs)
scaffold0097 (360-441)||(12735-12816)
[»] scaffold1155 (1 HSPs)
scaffold1155 (283-389)||(958-1068)
[»] scaffold0345 (1 HSPs)
scaffold0345 (283-389)||(9149-9259)
[»] scaffold0105 (1 HSPs)
scaffold0105 (283-389)||(29721-29831)
[»] scaffold0432 (1 HSPs)
scaffold0432 (292-340)||(5372-5420)


Alignment Details
Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 283 - 479
Target Start/End: Complemental strand, 41093189 - 41092992
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41093189 ttctacacttatccttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacc 41093090  T
Q  383 taacaaa--cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||||  |||| |         || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  41093089 taacaaattcttcct-aaaaaaaatgcatcgcaccaatttcatttttatcctcttgcctttattttgttgaagaaaatattttatacacttatccttat 41092992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 41100696 - 41100569
Alignment:
Q  30 aaaaagcgaagacgcgggagataattatgcagtactactgtactgccagtcagtagagtagtttcctaacaataaaattaaataaatcaagaagtaaaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   |||| ||||    
T  41100696 aaaaagcgaagacgcgggagataattatgcagtactactgtactgccagtcagtagagtagtttgctaacaataaaattaaataaatc---aagttaaaa 41100600  T
Q  130 tatgttttatctctataaataatatttttta 160  Q
    |||||||||||||||||||||||||||||||    
T  41100599 tatgttttatctctataaataatatttttta 41100569  T

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Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 283 - 473
Target Start/End: Complemental strand, 43395072 - 43394881
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||| |||  || |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43395072 ttctacacttatccttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacc 43394974  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||| |||||||       || |||||||||||||||||| ||||||||| ||  ||| |||| |||| |||||||| || |||||||||    
T  43394973 taacaaatttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttttttttgacgaaaatattttctacacttat 43394881  T

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Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 283 - 479
Target Start/End: Original strand, 16528945 - 16529138
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  16528945 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt--tcctgctcatttgccttattaggtttgcaattatttaacc 16529042  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||||||| || ||||       |  |||||||||||||||||| |||||| || ||||| |||| || |||||||||| || |||||||||||||||    
T  16529043 taacaaatttaatctaaaaaaattcatcgcaccaatttcattcatatccttttgccttt-ttttttttaagaaaatattttctacacttatccttat 16529138  T

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Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 293 - 446
Target Start/End: Original strand, 7127555 - 7127708
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |     
T  7127555 atccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaattc 7127654  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||       ||||||||||||||||||||| ||||||||| | ||||||||    
T  7127655 catctaaaaaaatgtatcgcaccaatttcattcctatcctcttgcttttatttt 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 286 - 435
Target Start/End: Complemental strand, 41093006 - 41092859
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  41093006 tacacttatccttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaa 41092908  T
Q  386 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |||| |||||||       || ||| | |||||||||||| |||||||||    
T  41092907 caaa-ttcatctaaaaaaatgcatcaccccaatttcattcctatcctctt 41092859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 473
Target Start/End: Complemental strand, 26523269 - 26523089
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||| | |||||||| |     
T  26523269 atccttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattc 26523170  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| |||  ||||||||||||| || |||| ||||    
T  26523169 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttgtttgaagaaaatattttctacatttat 26523089  T

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Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 469
Target Start/End: Original strand, 35159690 - 35159875
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| ||||||||||||||||||||||||  || |||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  35159690 ttctacatttatccttatttattaattttgttacgtctgcagcaatttaacctatttt-ttcccgctcatttgctttattaggtttgcaattatttaacc 35159788  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacac 469  Q
    ||||||| || ||||       || |||||||||||||||||| ||| ||||  | ||| |||| ||||||||||||| || |||||    
T  35159789 taacaaattttatctaaaaaaatgcatcgcaccaatttcattcctattctctgtcttttttttttttgaagaaaatattttctacac 35159875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 286 - 479
Target Start/End: Original strand, 16528589 - 16528780
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||| |||| |||||||||||||||||||  || | || |||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||    
T  16528589 tacatttattcttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaa 16528688  T
Q  386 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||| |  ||||       || |||||||||||||||||| ||||||||| || ||||||| ||||||||||||| || |||||||||||||||    
T  16528689 caaattctatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcc-ttatttt-ttgaagaaaatattttctacacttatccttat 16528780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 297 - 440
Target Start/End: Complemental strand, 12442258 - 12442115
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||| |||| ||| |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| | ||||    
T  12442258 ttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 12442159  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 440  Q
    |       || |||||||||||||||||| ||||||||||||||    
T  12442158 tacaaaaatgcatcgcaccaatttcattcatatcctcttacctt 12442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 283 - 479
Target Start/End: Original strand, 16528763 - 16528962
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgg----gtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 378  Q
    |||||||||||||||||||||||||||||||| |    || |||| |||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  16528763 ttctacacttatccttatttattaattttgtttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatattt 16528862  T
Q  379 aacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatcctta 478  Q
    ||||||||||  | |||||       |  |||||||||||||||||| |||||| || ||||| |||| || |||||||||| || ||||||||||||||    
T  16528863 aacctaacaacttccatctaaaaaaattcatcgcaccaatttcattcctatccttttgccttt-ttttttttaagaaaatattttctacacttatcctta 16528961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 479
Target Start/End: Original strand, 11313807 - 11313982
Alignment:
Q  302 tattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnn 401  Q
    |||||||||||||  || |||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||| | |||||        
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatctaaaa 11313906  T
Q  402 nnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
       |||||| |||||||||||||| ||||||||| ||||  |||| || |||||||||| || |||||||||||||||    
T  11313907 aaatgtatcccaccaatttcattcctatcctcttgcctt--ttttttttaagaaaatattttctacacttatccttat 11313982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 293 - 446
Target Start/End: Original strand, 19121903 - 19122056
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||| |||||||||||||| |     
T  19121903 atccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaaattc 19122002  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     ||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  19122003 tatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 19122056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 460
Target Start/End: Original strand, 11313965 - 11314144
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||    
T  11313965 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaac 11314064  T
Q  382 ctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacct-ttattttgttgaagaaaatat 460  Q
    |||| ||| | |||||       || |||||||||||||||||| |||| |||| ||| || |||| || ||||||||||    
T  11314065 ctaaaaaattccatctaaaaaaatgcatcgcaccaatttcattcctatcttcttgcctctttttttttttaagaaaatat 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 24351583 - 24351428
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||| || ||| ||||  ||||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||     
T  24351583 ttatccttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaat 24351484  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||       || |||||||||||||||||  ||||||||| ||||| ||||    
T  24351483 ttcatctaaaaaaatgcatcgcaccaatttcattactatcctcttgcctttttttt 24351428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 26523375 - 26523269
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||    
T  26523375 ttctacatttatccttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacc 26523276  T
Q  383 taacaaa 389  Q
    |||||||    
T  26523275 taacaaa 26523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 16529121 - 16529227
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||     
T  16529121 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacg 16529220  T
Q  383 taacaaa 389  Q
    |||||||    
T  16529221 taacaaa 16529227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 19122239 - 19122335
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||| ||||||||||||||    
T  19122239 atccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaaa 19122335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 292 - 479
Target Start/End: Complemental strand, 7673330 - 7673142
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||| ||||||||||||||||||  || |||| |||||||||||||||| || || | ||||||| |||||||||||||||||||||||||||||||||     
T  7673330 tatctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaat 7673231  T
Q  391 ttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||||        || |||||| ||||||||||| ||| ||| | ||||| |||| || |||||||||| ||||||| ||||||||||    
T  7673230 ttcatctaaaaaaaatgcatcgcatcaatttcattcatattctcctgccttt-tttttttaaagaaaatattttatacatttatccttat 7673142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 296 - 473
Target Start/End: Complemental strand, 13035310 - 13035130
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta----tttaacctaacaaact 391  Q
    ||||||||||||||||||  ||| |||| |||||||| ||||||| || | ||||||| | |||||||||||||||||||    |||||||||||||| |    
T  13035310 cttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaatt 13035211  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||       || |||||||||||||||||| ||| ||||| ||||| |||| ||||||||||||| || |||||||||    
T  13035210 tcatctaaaaaaatgcatcgcaccaatttcattcctattctcttgccttt-tttttttgaagaaaatattttctacacttat 13035130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 296 - 473
Target Start/End: Complemental strand, 13105285 - 13105104
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta----tttaacctaacaaact 391  Q
    ||||||||||||||||||  ||| |||| || ||||||||||||| || | ||||||| | |||||||||||||||||||    |||||||||||||| |    
T  13105285 cttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaatt 13105186  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||       || |||||||||||||||||| ||||||||| ||||| |||| |  |||||||||| || |||||||||    
T  13105185 tcatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgccttttttttttcaaagaaaatattttctacacttat 13105104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 435
Target Start/End: Complemental strand, 31487195 - 31487052
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||||| | |||| ||||||||||| ||||||||| ||| | |||||||||||||||     
T  31487195 ttatccttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaat 31487096  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |||||||       || |||||||||||||||||| |||||||||    
T  31487095 ttcatct-aaaaaatgcatcgcaccaatttcattcctatcctctt 31487052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 479
Target Start/End: Original strand, 35159414 - 35159602
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||| ||||||||||||||||||  || |||| |||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||||| || |    
T  35159414 tatctttatttattaattttgttacgt-tgcaacaatttaacctaattt-ttcccgttcttttgctttattaggtttgcaattatttaacctaaccaatt 35159511  T
Q  392 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttatccttat 479  Q
     |||||        || |||||||||||||||||  ||||||||| ||  ||| |||| ||||||||||||| || |||||||||||||||    
T  35159512 ccatctaaaaaaaatgcatcgcaccaatttcatttatatcctcttgcctttttttttttttgaagaaaatattttctacacttatccttat 35159602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 11313635 - 11313732
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||| ||  || | || |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  11313635 tatccttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaa 11313732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 9488179 - 9488075
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | | | |||||||||||||| |||||||||||||||||||||||| ||    
T  9488179 atccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaattt 9488080  T
Q  393 catct 397  Q
    |||||    
T  9488079 catct 9488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 16526190 - 16526290
Alignment:
Q  290 cttatccttatttattaa-ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    |||||||||||||||||| |||||||  || ||||||||||||||||||||| ||    |||||||||||||||||||||||||||||||||||||||||    
T  16526190 cttatccttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaa 16526289  T
Q  389 a 389  Q
    |    
T  16526290 a 16526290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 293 - 473
Target Start/End: Original strand, 10409521 - 10409700
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || | ||  ||||||| ||||||| |||| |||||||| ||| | ||| |||||||||||||||||||||||| ||    
T  10409521 atccttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaattt 10409620  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||| |       || |||||| ||||||||||| ||||||||| ||||| | || ||||||||||||| || |||||||||    
T  10409621 catttaaaaaaatgcatcgcatcaatttcattcatatcctcttgccttt-tctttttgaagaaaatattttctacacttat 10409700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 446
Target Start/End: Complemental strand, 24350995 - 24350875
Alignment:
Q  326 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 425  Q
    ||||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||       || |||||||||||||||||     
T  24350995 aatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatta 24350896  T
Q  426 ttatcctcttacctttatttt 446  Q
     ||||||||| ||||| ||||    
T  24350895 ctatcctcttgcctttttttt 24350875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 479
Target Start/End: Complemental strand, 26523547 - 26523358
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc---tgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    ||||||||||||||||||||||| |||||||| || |||||| |||||| ||     ||||||||||||||||||  |||||||||||||||| ||||||    
T  26523547 tatccttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttatta--tttgcaattatttaacataacaa 26523450  T
Q  389 acttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt-attttgttgaagaaaatatgttatacacttatccttat 479  Q
    | |||||||       || ||| || ||||||||||| |||| |||| |||||  |||| ||||||||||||| || |||| ||||||||||    
T  26523449 atttcatctaaaaaaatgcatcacatcaatttcattcctatcatcttgcctttcttttttttgaagaaaatattttctacatttatccttat 26523358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 23138027 - 23138122
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    ||||||||||||||||||| ||| ||| |||| || ||||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||    
T  23138027 tatccttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaacaa 23138122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 446
Target Start/End: Complemental strand, 31486941 - 31486792
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||||| || ||| |||| |||||||||||||| | |||| | ||||||||| |||||||||  || | ||||||||||||||| | ||||    
T  31486941 ttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattccatc 31486842  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |       || |||||||||||||||||| ||||||||| ||||| ||||    
T  31486841 taaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 31486792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 16305344 - 16305434
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||||| ||| || |  ||||||| |||||||  ||| |||||||||||||||||||||||||||||||||| ||||    
T  16305344 atccttatttattaattttgttaggtttgtaataatttaaactaattt--tcccgctcatttgctttattaggtttgcaattatttaatctaa 16305434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 24326548 - 24326609
Alignment:
Q  320 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24326548 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 24350793 - 24350732
Alignment:
Q  320 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24350793 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 24351347 - 24351286
Alignment:
Q  320 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24351347 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 473
Target Start/End: Complemental strand, 38004774 - 38004597
Alignment:
Q  292 tatccttatttattaattttgttg-ggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||  ||| ||||   ||||||| |||||| || | | |||||||||||| |||||||| |||||||||| |||| |||     
T  38004774 tatccttatttattaattttgttaaggtttgca---atttaacttaatttttttc-gttcatttgctttaataggtttgtaattatttaatctaataaat 38004679  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||       || |||||| ||||||||||| ||||||||| | ||| |||| ||||||||||||| || |||||||||    
T  38004678 ttcatctaaaaaa-tgcatcgcatcaatttcattcatatcctcttgcttttttttttttgaagaaaatattttctacacttat 38004597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 479
Target Start/End: Complemental strand, 43395207 - 43395055
Alignment:
Q  326 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct--nnnnnnntgtatcgcaccaatttcat 423  Q
    |||||||| | |||| |||| |||||||||||||||||||||| |||||||||||||||||||| | ||| |         || ||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcat 43395108  T
Q  424 tcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    || |||||||| ||   | |||| || |||||||||| || |||||||||||||||    
T  43395107 tcctatcctctaac---ttttttttttaagaaaatattttctacacttatccttat 43395055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 14166289 - 14166196
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgc-tcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||| ||| ||||  |||||||| |||||| ||  |   ||||||||||||||| |||||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaa 14166196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 7673156 - 7673102
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    |||| ||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  7673156 tacatttatccttatttattaattttgttacgtctgcagcaatttaacctaattt 7673102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 460
Target Start/End: Original strand, 16528532 - 16528584
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatat 460  Q
    |||||||||||||||||  ||||||||| ||||| |||| |||||||||||||    
T  16528532 atcgcaccaatttcattgctatcctcttgcctttttttttttgaagaaaatat 16528584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 340
Target Start/End: Original strand, 38268880 - 38268923
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaattt 38268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 446
Target Start/End: Complemental strand, 9487836 - 9487798
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  9487836 atcgcaccaatttcattcttatcctcttgcctttttttt 9487798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 14854324 - 14854373
Alignment:
Q  289 acttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 338  Q
    ||||||||||||||||||||||| || ||| |||| ||| ||||||||||    
T  14854324 acttatccttatttattaattttattaggtttgcagcaacttaacctaat 14854373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 22431580 - 22431633
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 345  Q
    |||||||||||||||||||||||  || |||| ||| |||||||||||| ||||    
T  22431580 tatccttatttattaattttgttaagtctgcagcaacttaacctaattttttcc 22431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 296 - 479
Target Start/End: Original strand, 47631359 - 47631542
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  47631359 cttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcat 47631458  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||       || |||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||| |||||    
T  47631459 ctaaaaaaatgcatcgcaccaatttcattcttatcctcctgcctttatttttttgaagaaaatattttatacacttattcttat 47631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 283 - 479
Target Start/End: Original strand, 48076354 - 48076548
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||| |||||||||||||||  || |||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  48076354 ttctacacttatccttctttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacc 48076453  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||||||| |||||||       || ||||||||||||||||||||||||| || ||||  |||| ||||||||||||| || |||| ||||||||||    
T  48076454 taacaaatttcatctaaaaaaatgcatcgcaccaatttcattcttatccttttgcctt--tttttttgaagaaaatattttctacaattatccttat 48076548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 284 - 473
Target Start/End: Original strand, 36639332 - 36639522
Alignment:
Q  284 tctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacct 383  Q
    ||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||||| |||| | |||||| |||||||||| |||||||||||||||||    
T  36639332 tctacacttatccttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacct 36639431  T
Q  384 aacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||| |||||||       ||||||||||||||||| ||| |||||||||||| ||| |||| ||||||||||||| || |||| ||||    
T  36639432 aacaaatttcatctaaaaaaatgtatcgcaccaatttccttcctatcctcttaccttttttttttttgaagaaaatattttctacatttat 36639522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 293 - 473
Target Start/End: Original strand, 24049561 - 24049740
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| || ||    
T  24049561 atccttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaattt 24049660  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || ||| |||||||||||||  |||| |||| ||||| |||| |||||| |||||| || |||||||||    
T  24049661 catctaaaaaaatgcatcacaccaatttcatttctatcttcttgccttt-tttttttgaaggaaatattttctacacttat 24049740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 290 - 477
Target Start/End: Original strand, 48076183 - 48076369
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||||||  || |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  48076183 cttatccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 48076282  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatcctt 477  Q
     | |||||       || |||||||||||||||||||| |||| || ||||| |||| |  |||||||||| || |||||||||||||    
T  48076283 ttccatctaaaaaaatgcatcgcaccaatttcattcttttccttttgccttt-ttttttccaagaaaatattttctacacttatcctt 48076369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 291 - 473
Target Start/End: Complemental strand, 52689730 - 52689549
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||| ||||||||||||||| || ||| ||||| |||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||     
T  52689730 ttatctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaat 52689631  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||       || |||||||||||||||||| ||||||||| ||||| |||| |||||| |||||| || |||||||||    
T  52689630 ttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttttttgaaggaaatattttctacacttat 52689549  T

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Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 292 - 440
Target Start/End: Complemental strand, 28379872 - 28379725
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| || |    
T  28379872 tatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaac-aatt 28379774  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 440  Q
     |||||       || |||||||||| ||||||||||||||||||||||    
T  28379773 ccatctaaaaaaatgcatcgcaccaagttcattcttatcctcttacctt 28379725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 294 - 446
Target Start/End: Original strand, 36639169 - 36639321
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    |||||||||||||||||||||  || || | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  36639169 tccttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttc 36639268  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  36639269 atctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 36639321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 292 - 473
Target Start/End: Original strand, 47768947 - 47769129
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||||| |    
T  47768947 tatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatt 47769046  T
Q  392 tcatc-tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||| |       || ||| |||||||||||||| ||||||||| ||||| |||| ||||| ||||||| || |||||||||    
T  47769047 tcatcttaaaaaaatgcatcacaccaatttcattcctatcctcttgcctttttttttttgaataaaatattttctacacttat 47769129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 283 - 397
Target Start/End: Complemental strand, 43161860 - 43161746
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||| |||||  || |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  43161860 ttctacacttatccttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacc 43161761  T
Q  383 taacaaacttcatct 397  Q
    ||||||| |||||||    
T  43161760 taacaaatttcatct 43161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 296 - 479
Target Start/End: Complemental strand, 21585663 - 21585481
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||||  || |||| ||||||||| |||||| || |  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21585663 cttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcat 21585564  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||       ||||||| ||||||||||||| |||||||||  |||| |||| || |||||||||| || |||||||||||||||    
T  21585563 ct-aaaaaatgtatcgtaccaatttcattcctatcctcttgtcttttttttttttaagaaaatattttctacacttatccttat 21585481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 286 - 389
Target Start/End: Original strand, 47631528 - 47631630
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  47631528 tacacttattcttatttattaattttgtcaggtctgcatcaatttaacctaatttatt-ctgctcttttgctttattaggtttgcaattatttaacctaa 47631626  T
Q  386 caaa 389  Q
    ||||    
T  47631627 caaa 47631630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 54653758 - 54653606
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |      
T  54653758 tccttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattca 54653659  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||       || ||| |||||||||||||| ||||||||| ||||| ||||    
T  54653658 atctaaaaaaatgcatcacaccaatttcattcctatcctcttgcctttttttt 54653606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 435
Target Start/End: Original strand, 7821514 - 7821657
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| || | |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||  ||| |    
T  7821514 tatccttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatt 7821613  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    ||||||       || |||||||||||||||||| |||||||||    
T  7821614 tcatctaaaaaaatgcatcgcaccaatttcattcctatcctctt 7821657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 473
Target Start/End: Complemental strand, 8397853 - 8397675
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||| |||| ||||||||||||||||||||||||| ||||||| |    
T  8397853 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatt 8397754  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||       || || |||||| |||||||||||| ||||| |||   ||||||| ||| |||||| || |||||||||    
T  8397753 tcatctaaaaaaatgcattgcaccattttcattcttattctcttgcct---ttttgtttaaggaaatattttctacacttat 8397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 473
Target Start/End: Original strand, 7821301 - 7821478
Alignment:
Q  295 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttca 394  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||| || ||||||||||||||   ||||||||||||||||||| ||| | ||    
T  7821301 ccttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattcca 7821400  T
Q  395 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||       || |||||||||||||||||| ||||||||| ||||| ||||||||||| |||||| || ||| |||||    
T  7821401 tctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-ttttgttgaaggaaatattttctacgcttat 7821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 53144955 - 53144851
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| ||    
T  53144955 atccttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaattt 53144856  T
Q  393 catct 397  Q
    |||||    
T  53144855 catct 53144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 473
Target Start/End: Complemental strand, 12796227 - 12796048
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||| || ||| || | |||||||||||||||| || | ||||||||| |||||||||||||||||||||||| |||||||| | |||    
T  12796227 cttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccat 12796128  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttat 473  Q
    ||       || |||||||||| ||||||| ||||||||||||  ||| |||| ||||||||||||| || |||||||||    
T  12796127 ctaaaaatatgcatcgcaccaacttcattcatatcctcttacctttttttttttttgaagaaaatattttctacacttat 12796048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 23952613 - 23952434
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    |||||||||||||||||||||  || |||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||| | |    
T  23952613 tccttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattcc 23952514  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 473  Q
    || |       || |||||||||||||||||| ||||||||| || ||| || | ||||||||||||| || |||||||||    
T  23952513 at-ttaaaaaatgcatcgcaccaatttcattcctatcctcttgccattttttcttttgaagaaaatattttctacacttat 23952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 292 - 473
Target Start/End: Original strand, 22292893 - 22293070
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||| | ||| |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |    
T  22292893 tatccttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa-t 22292991  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||          || ||||||||||||| |||| ||||||||| |||   |||| ||||||||||||| || |||||||||    
T  22292992 tcaataaaaaaaatgcatcgcaccaattttattcctatcctcttgcct---tttttttgaagaaaatattttctacacttat 22293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 296 - 479
Target Start/End: Complemental strand, 23952887 - 23952706
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||| ||||||||||||||||||||||||| ||||||| | |||    
T  23952887 cttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccat 23952788  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||       || ||||| |||||||||||| |||| |||| ||||| |||  ||||||||||||| || |||||||||||||||    
T  23952787 ctaaaaaaatgcatcgcgccaatttcattc-tatcatcttgccttt-tttctttgaagaaaatattttctacacttatccttat 23952706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 28380082 - 28379986
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  28380082 tatccttatttattaattttgttaggtctgcaccaatttaacctaattt-ttcttgctcatttgttttattaggtttgcaattatttaacctaacaaa 28379986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 44500667 - 44500764
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  44500667 tatccttgtttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaa 44500764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 7796779 - 7796883
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||||||||||||||||||| ||| |||||||||||||||||||     
T  7796779 ttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaacaaat 7796878  T
Q  391 ttcat 395  Q
    |||||    
T  7796879 ttcat 7796883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 48076531 - 48076637
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| ||||||||||||||||||||||||  || |||| |||||||||||||||| || | ||| |||||||||||||||||| |||||||||||||    
T  48076531 ttctacaattatccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacc 48076630  T
Q  383 taacaaa 389  Q
    |||||||    
T  48076631 taacaaa 48076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 2177264 - 2177402
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||| |||| | | |||| ||||||||  |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  2177264 ttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaatttcatc 2177363  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |       || |||||||||||||||||| |||||||||    
T  2177364 taaaaacatgcatcgcaccaatttcattcatatcctctt 2177402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 4941678 - 4941816
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||||||||   | | ||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4941678 ttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 4941777  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |       || |||||||||||||||||  |||||||||    
T  4941778 taaaaaaatgcatcgcaccaatttcattgctatcctctt 4941816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 328 - 473
Target Start/End: Complemental strand, 21581351 - 21581206
Alignment:
Q  328 tttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgta-tcgcaccaatttcattct 426  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||       || | |||||||||||||||||     
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcattcgcaccaatttcattcc 21581252  T
Q  427 tatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||| ||||| ||||| |||| |||||||||||||| | |||||||||    
T  21581251 tattctcttgccttt-tttttttgaagaaaatatgatctacacttat 21581206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 446
Target Start/End: Original strand, 28813220 - 28813374
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| | || |||||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||| |    
T  28813220 tatccttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaacaaatt 28813318  T
Q  392 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||||        || || ||||||||||||||| || |||||||||||| ||||    
T  28813319 tcatctaaaaaaaatgcattgcaccaatttcattcataccctcttacctttttttt 28813374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 7809348 - 7809474
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||| |||||||||||| ||| |||| ||||| |||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  397 tnnnnnnntgtatcgcaccaatttcat 423  Q
    |       || ||||||||||||||||    
T  7809448 taaaaaaatgcatcgcaccaatttcat 7809474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 434
Target Start/End: Original strand, 8118608 - 8118734
Alignment:
Q  308 ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgt 407  Q
    ||||||| ||| |||| |||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||| |||||||       ||     
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgc 8118707  T
Q  408 atcgcaccaatttcattcttatcctct 434  Q
     ||||||||||||||||| ||||||||    
T  8118708 ttcgcaccaatttcattcctatcctct 8118734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 397
Target Start/End: Original strand, 8118377 - 8118481
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||| |||  || |||| ||||||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||||     
T  8118377 ttatccttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaat 8118474  T
Q  391 ttcatct 397  Q
    |||||||    
T  8118475 ttcatct 8118481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 29967177 - 29967271
Alignment:
Q  295 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||||| |||| ||||||||| |||||||| ||||||||||| ||||||||||||    
T  29967177 ccttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaa 29967271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 441
Target Start/End: Complemental strand, 2481754 - 2481613
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    |||| |||||||||||||  || |||| ||| |||||||||||| |||| |||||||||||||||||||||||||   ||||||||||||||| | ||||    
T  2481754 ttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaattccatc 2481658  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |       || |||||||||||||||||| ||||||||| |||||    
T  2481657 taaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt 2481613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 22292701 - 22292783
Alignment:
Q  307 attttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||| ||| ||||  ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 22292783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 28389877 - 28389785
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||| ||| ||||  |||| | |||||| | |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  28389877 ttatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaa 28389785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 473
Target Start/End: Original strand, 7809561 - 7809708
Alignment:
Q  326 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 425  Q
    ||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||||| ||| |||||||       || ||||||||||||| | ||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttcatctaaaaaaatgcatcgcaccaatttta-tc 7809659  T
Q  426 ttatcctcttaccttt-attttgttgaagaaaatatgttatacacttat 473  Q
     ||||||||| |||||  |||| |||||| |||||| || |||||||||    
T  7809660 ctatcctcttgcctttgttttttttgaaggaaatattttctacacttat 7809708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 8079295 - 8079387
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||| |||||   || ||  |||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  8079295 tccttatttattaattttgctgggt---caacagcttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaa 8079387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 24046058 - 24046123
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttg 355  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||    
T  24046058 cttatccttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 15456285 - 15456363
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 368  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  15456285 cttatccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 15463669 - 15463747
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 368  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  15463669 cttatccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 473
Target Start/End: Complemental strand, 8479198 - 8479075
Alignment:
Q  347 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  8479198 gctcatttgctttattagatttgcaatta-ttaacctaacaaatttcatct-aaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttt 8479102  T
Q  447 gttgaagaaaatatgttatacacttat 473  Q
     |  |||||||||| || |||||||||    
T  8479101 ttgtaagaaaatattttctacacttat 8479075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 473
Target Start/End: Original strand, 24049337 - 24049459
Alignment:
Q  351 atttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttg 450  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||       || ||||||| | |||||||| |||||||||   ||| |||| ||     
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatctaaaaaaatgcatcgcactagtttcattcctatcctcttgttttttttttttta 24049436  T
Q  451 aagaaaatatgttatacacttat 473  Q
    ||| |||||| || |||||||||    
T  24049437 aaggaaatattttctacacttat 24049459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 32010789 - 32010701
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    ||||||||||||||||||  || ||||  ||||||| ||||||| || | |||||||| |||||||||||||| |||||||| ||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaa 32010701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 43162003 - 43161939
Alignment:
Q  325 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||| ||| || |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  43162003 caatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaa 43161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 41852188 - 41852151
Alignment:
Q  360 attaggtttgcaattatttaacctaacaaacttcatct 397  Q
    |||||||||||||||||||||||||||||| |||||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatct 41852151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 314
Target Start/End: Complemental strand, 21585498 - 21585467
Alignment:
Q  283 ttctacacttatccttatttattaattttgtt 314  Q
    ||||||||||||||||||||||||||||||||    
T  21585498 ttctacacttatccttatttattaattttgtt 21585467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 446
Target Start/End: Complemental strand, 28380182 - 28380144
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  28380182 atcgcaccaatttcattcttatcctcttgcctttttttt 28380144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 2526940 - 2526989
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 345  Q
    ||||||||||||||||| | ||| |||| |||||||||||||||| ||||    
T  2526940 cttatttattaattttggtaggtctgcagcaatttaacctaattttttcc 2526989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 8079018 - 8079111
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||| | | || | |||||||| ||||||| || || ||||||||| | ||||||||| ||| |  ||||||||||||||    
T  8079018 ttatttattaattttgttagttctggagcaatttaagctaattttttccccgctcatttgttgtattaggttagcagtagtttaacctaacaaa 8079111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 43161914 - 43161843
Alignment:
Q  411 gcaccaatttcattcttatcctcttacctttatttt---gttgaagaaaatatgttatacacttatccttat 479  Q
    ||||||||||||||| ||||||||| ||||| ||||    || |||||||||| || |||||||||||||||    
T  43161914 gcaccaatttcattcatatcctcttgccttttttttttcttttaagaaaatattttctacacttatccttat 43161843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 446
Target Start/End: Complemental strand, 47428498 - 47428372
Alignment:
Q  320 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatt 419  Q
    |||| ||| |||||||||| | ||||  | |||||| | ||||||||| ||| | ||||||||||||||| | |||||       || ||| ||||||||    
T  47428498 tgcagcaacttaacctaatattttccctcccatttgttgtattaggttagcagtaatttaacctaacaaattccatctaaaaaaatgcatctcaccaatt 47428399  T
Q  420 tcattcttatcctcttacctttatttt 446  Q
    ||||| |||||||||| ||||| ||||    
T  47428398 tcatttttatcctcttgcctttttttt 47428372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 47428358 - 47428306
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 338  Q
    |||| |||||||||||||||||||||||| | | | || ||||||||||||||    
T  47428358 tacatttatccttatttattaattttgttagatctacaacaatttaacctaat 47428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 283 - 472
Target Start/End: Original strand, 46451456 - 46451643
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||| ||||||||||||||||||||||||||  || ||||  ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  46451456 ttctatacttatccttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacc 46451555  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacactta 472  Q
    ||||||| | |||||       || |||||||||||||||||| ||||||||||||||  |||| ||||||||||||| || ||||||||    
T  46451556 taacaaattccatctaaaataatgcatcgcaccaatttcattcctatcctcttacctt--tttttttgaagaaaatattttctacactta 46451643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 294 - 473
Target Start/End: Original strand, 18094953 - 18095132
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| | |    
T  18094953 tccttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattcc 18095052  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||       || |||||||||||||||||| ||||||||| ||||| |||| || ||| |||| | || |||||||||    
T  18095053 atcttaaaaaatgaatcgcaccaatttcattcatatcctcttgccttttttttttttaaggaaattttttttacacttat 18095132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 301 - 473
Target Start/End: Original strand, 37760501 - 37760673
Alignment:
Q  301 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnn 400  Q
    ||||||||||||||  || |||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||        
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatccaaa 37760600  T
Q  401 nnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
        ||||||||||||||||||||||||||||||| ||||| |||| ||  ||||||||| || |||||||||    
T  37760601 aaaatgtatcgcaccaatttcattcttatcctcttgcctttttttttttttagaaaatattttctacacttat 37760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 47503162 - 47503010
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    |||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  47503162 tccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttc 47503063  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||       || |||||||||||||||||| ||||||||| ||||||||||    
T  47503062 atctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttatttt 47503010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 11454201 - 11454384
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||| | ||||||| |||||||||||||||||||||||||| ||    
T  11454201 atccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaattt 11454300  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||       || |||||||||||||||||| |||||| || |||   |||| || |||||||||| || |||||||||||||||    
T  11454301 catctaaaaaaatgcatcgcaccaatttcattcatatccttttgcct---ttttttttaagaaaatattttctacacttatccttat 11454384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 473
Target Start/End: Complemental strand, 36643237 - 36643057
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |     
T  36643237 atccttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 36643138  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       |||||||||||||||| |||| ||||||||| ||||   ||| || ||| |||||| || |||||||||    
T  36643137 catctaaaaaaatgtatcgcaccaatttgattcctatcctcttgccttctgttttttaaaggaaatattttctacacttat 36643057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 38887476 - 38887373
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  38887476 tatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 38887377  T
Q  392 tcat 395  Q
    ||||    
T  38887376 tcat 38887373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 292 - 435
Target Start/End: Complemental strand, 837314 - 837171
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||||||||||||||||||| ||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |    
T  837314 tatccttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 837215  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     |||||       || ||||||||||||||||||||||||||||    
T  837214 ccatctaaaaaaatgcatcgcaccaatttcattcttatcctctt 837171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 479
Target Start/End: Original strand, 11454367 - 11454565
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgg---gtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattta 379  Q
    |||||||||||||||||||||||||||||||||    || |||| ||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||    
T  11454367 ttctacacttatccttatttattaattttgttgttacgtctgcagcaatttatcctaattttttc-tgctcatttgctttattaggcttgcaattattta 11454465  T
Q  380 acctaacaaacttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatcctta 478  Q
    ||||||||||||||||||        || ||||||||||||||||||  ||| | ||  |||| |||| ||||||||||||| || ||||||||||||||    
T  11454466 acctaacaaacttcatctaaaaaaaatgcatcgcaccaatttcattccaatcat-tttgctttttttttttgaagaaaatattttctacacttatcctta 11454564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 446
Target Start/End: Original strand, 40050845 - 40050998
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||||||||||||| |||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |    
T  40050845 tatccttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaa-t 40050943  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||||       || ||||||||||||| |||| ||||||||| ||||| ||||    
T  40050944 tcatctacaaaaatgcatcgcaccaatttaattcctatcctcttgcctttttttt 40050998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 11454548 - 11454655
Alignment:
Q  283 ttctacacttatccttatttattaatttt-gttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    ||||||||||||||||||||||||||||| |||  || |||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  11454548 ttctacacttatccttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaac 11454647  T
Q  382 ctaacaaa 389  Q
    ||||||||    
T  11454648 ctaacaaa 11454655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 35560101 - 35560280
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt--cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttca 394  Q
    ||||||||||||||||||   | |||| |||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  35560101 ttatttattaattttgttacttctgcagcaatttaacctaattttttttcct-ctcatttgctttattaggtttgcaattatttaacctaacaaatttca 35560199  T
Q  395 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttac--ctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||        || |||||||||||||||||| ||||||||| |  |||| |||| ||||||||||||| || |||||||||    
T  35560200 tccaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctctttttttttttgaagaaaatattttctacacttat 35560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 43017266 - 43017371
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||||| ||||||||||||||||  || |||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| |    
T  43017266 tatcctcatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatt 43017365  T
Q  392 tcatct 397  Q
    ||||||    
T  43017366 tcatct 43017371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 18094737 - 18094833
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  18094737 atccttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaa 18094833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 297 - 446
Target Start/End: Complemental strand, 53047693 - 53047545
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||     
T  53047693 ttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaatttcat- 53047595  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |       || |||||||||||||||||  ||||||||| ||||| ||||    
T  53047594 ttaaaaaatgcatcgcaccaatttcatttctatcctcttgcctttttttt 53047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 47503339 - 47503183
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||| ||  || | |  |||||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||||||    
T  47503339 ttatccttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 47503240  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     |||||||       || |||||||||||||||||| |||||||||  |||||||||    
T  47503239 tttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgtctttatttt 47503183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 292 - 473
Target Start/End: Original strand, 11522527 - 11522709
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| | || |||||||||||||||| || | | ||||||| |||||||||||| ||||| |||||||||||||| |    
T  11522527 tatccttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatt 11522626  T
Q  392 tcatct--nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||         || | ||||||||||||||||||||||||||  |||| |||| |||||| |||||| || |||||||||    
T  11522627 tcatctaaaaatatatgaaccgcaccaatttcattcttatcctcttgtcttt-tttttttgaaggaaatattttctacacttat 11522709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 446
Target Start/End: Complemental strand, 20877323 - 20877173
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||||  || |||| |||||||| ||||||| ||||  ||||||| ||||||||||||||   ||||||||||||||||| |||||    
T  20877323 cttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcat 20877224  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  20877223 ctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 20877173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 38887691 - 38887592
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcct--gctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||| ||||||||||||||| || ||| |||| |||||||||||||||| ||  |  |||||||||||||||||||||||||||||||||||||||||||    
T  38887691 tatcattatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 38887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 38887905 - 38887809
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||| |  ||| ||||  ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||    
T  38887905 atccttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaa 38887809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 397
Target Start/End: Complemental strand, 45514530 - 45514425
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  || |||| |||||||| ||||||| |||| | |||||| |||||||| ||||||||||||||||||||| |||     
T  45514530 ttatccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaataaat 45514432  T
Q  391 ttcatct 397  Q
    |||||||    
T  45514431 ttcatct 45514425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 301 - 386
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  301 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 386  Q
    |||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 16015360 - 16015264
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||| ||||||| ||| | |   ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||    
T  16015360 atccttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaa 16015264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 397
Target Start/End: Original strand, 24365735 - 24365834
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  ||       ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||     
T  24365735 ttatccttatttattaattttgttacgt-------aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaat 24365827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 11453933 - 11454030
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcct-gctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||  || || |  ||||||| ||||||| || || | |||||||||||||||||||||||||||||||||||||||||    
T  11453933 atccttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaa 11454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 46451320 - 46451425
Alignment:
Q  334 ctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct-nnnnnnntgtatcgcaccaatttcattcttatcct 432  Q
    ||||||| | || |||||||||||||||||| |||||||||||||||||||||||| |||||||        || |||||||||||||||||| ||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatctaaaaaaaatgcatcgcaccaatttcattcctatcct 46451419  T
Q  433 cttacc 438  Q
    ||||||    
T  46451420 cttacc 46451425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 47519955 - 47520015
Alignment:
Q  326 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 386  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaac 47520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 51654074 - 51654136
Alignment:
Q  327 atttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaa 51654136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 441
Target Start/End: Original strand, 43819330 - 43819472
Alignment:
Q  299 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 398  Q
    |||||||||||||||| ||| |||| |||||||||||||| | |||| ||||||||||| ||||| |||  || | ||||||||||| ||  |||||||     
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaataattttcatcta 43819429  T
Q  399 nnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
          || || ||||||||||||||  |||||||||||||||    
T  43819430 aaacaatgcattgcaccaatttcatttatatcctcttaccttt 43819472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 446
Target Start/End: Original strand, 11220780 - 11220925
Alignment:
Q  300 tttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 398  Q
    ||||||||||||||| ||| |||| |||||||||||||| || ||||  || ||||||| ||||||||| ||| | |||| |||||||||| |||||||     
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc--cttatttgctgtattaggttagcagtaattttacctaacaaatttcatcta 11220877  T
Q  399 nnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
          || || ||||||||||||||| ||||||||| ||||| ||||    
T  11220878 aaaaaatgcattgcaccaatttcattcatatcctcttgcctttttttt 11220925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 54274787 - 54274825
Alignment:
Q  352 tttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaacaaac 54274825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 440
Target Start/End: Original strand, 3847821 - 3847960
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||| | |||  ||||||||||| || | |        | ||||||||||||||| ||    
T  3847821 atccttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgctgtagtgg--------tgatttaacctaacaaattt 3847912  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 440  Q
    |||||       || |||||||||||||||||| ||||||||| ||||    
T  3847913 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttccctt 3847960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 46451238 - 46451295
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    ||||||||||||||||||||||||||||||||  || | || ||||||||||||||||    
T  46451238 ttctacacttatccttatttattaattttgttacgtctccaacaatttaacctaattt 46451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 850960 - 851032
Alignment:
Q  325 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct 397  Q
    ||||||||| |||||| || | ||||||||  ||||||||||||||||||||||||  ||||||| |||||||    
T  850960 caatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatct 851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 46451074 - 46451255
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||| |  || |||| ||||||||  |||||| || | |||||||| |||||    ||||||||||||||||||||||||| |     
T  46451074 atccttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcctttaa---gtttgcaattatttaacctaacaaattc 46451170  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
     ||||       || |||  |  |||||||||| |||||||||  |||  |||| ||||||||||||| || |||||||||||||||    
T  46451171 tatctaaaaaaatgcatcatattaatttcattcctatcctcttgtctt--tttttttgaagaaaatattttctacacttatccttat 46451255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 21969118 - 21968965
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||| |||||||||||||| || |||  ||| |||||||| ||||||| || || |  ||||||| ||||||||| ||| | |||||||||||||||     
T  21969118 ttatccgtatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaat 21969020  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    | |||||       || ||||||||||||||||||  |||||||| ||||| ||||    
T  21969019 tccatct-aaaaaatgcatcgcaccaatttcattcccatcctcttgcctttttttt 21968965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 21991554 - 21991401
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||| |||||||||||||| || |||  ||| |||||||| ||||||| || || |  ||||||| ||||||||| ||| | |||||||||||||||     
T  21991554 ttatccgtatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaat 21991456  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    | |||||       || ||||||||||||||||||  |||||||| ||||| ||||    
T  21991455 tccatct-aaaaaatgcatcgcaccaatttcattcccatcctcttgcctttttttt 21991401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 436
Target Start/End: Original strand, 52300747 - 52300850
Alignment:
Q  333 cctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcct 432  Q
    |||||||| |||| |||||||| || ||||||||| ||| | ||||||||||||||| | ||| |       || || ||||||||||||||| ||||||    
T  52300747 cctaattttttcccgctcatttactgtattaggttagcagtaatttaacctaacaaattccatttaaaaaaatgcattgcaccaatttcattcatatcct 52300846  T
Q  433 ctta 436  Q
    ||||    
T  52300847 ctta 52300850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 441
Target Start/End: Complemental strand, 20877007 - 20876974
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||||||||||||||||| |||||||||||||||    
T  20877007 atcgcaccaatttcattcctatcctcttaccttt 20876974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 293 - 479
Target Start/End: Complemental strand, 9142242 - 9142063
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| ||||  ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| | ||    
T  9142242 atccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaacacattt 9142143  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||         | ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| |||||| |||||||||||    
T  9142142 cat------tcttttatcgcaccaatttcattcttatcctcttgcctttgtttt-ttgaagaaaatattttatactcttatccttat 9142063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 23591524 - 23591370
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  23591524 tatccttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 23591425  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     |||||       || |||||||||||||||||| ||||||||||||||| ||||    
T  23591424 ccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttacctttttttt 23591370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 293 - 473
Target Start/End: Original strand, 18486630 - 18486808
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  18486630 atccttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 18486729  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || |||  ||||||||||||| ||||||||| ||||  |||| |||||| |||||| || |||||||||    
T  18486730 catctaaaaaaatgcatcataccaatttcattcctatcctcttgcctt--tttttttgaagcaaatattttctacacttat 18486808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 473
Target Start/End: Complemental strand, 4681005 - 4680828
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |     
T  4681005 atccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 4680906  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || |||||||||||||||||  ||||||||| ||||  |||| ||||||||||||| || |||||||||    
T  4680905 catct-aaaaaatgcatcgcaccaatttcatttctatcctcttgcctt--tttttttgaagaaaatattttctacacttat 4680828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 290 - 397
Target Start/End: Complemental strand, 9142073 - 9141966
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9142073 cttatccttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 9141974  T
Q  390 cttcatct 397  Q
     |||||||    
T  9141973 tttcatct 9141966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 291 - 473
Target Start/End: Complemental strand, 27716642 - 27716461
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||| ||| | || ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||      
T  27716642 ttatccttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaact 27716543  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    | |||||       || ||||||||||||| |||| ||||||||| ||||| ||||||| ||| |||||| || |||||||||    
T  27716542 tccatctaaaaaaatgcatcgcaccaatttgattcctatcctcttgccttttttttgtt-aaggaaatattttctacacttat 27716461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 295 - 473
Target Start/End: Complemental strand, 45419743 - 45419565
Alignment:
Q  295 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttca 394  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45419743 ccttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttca 45419644  T
Q  395 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||       || |||||||||||||||||  |||| |||| ||||| |||| |||||| |||||| || |||||||||    
T  45419643 tctaaaaagatgcatcgcaccaatttcatttctatcatcttgcctttttttttttgaaggaaatattttctacacttat 45419565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 292 - 441
Target Start/End: Complemental strand, 48640911 - 48640761
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||  ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  48640911 tatccttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 48640812  T
Q  392 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    ||||||        || |||||||||||||||||| ||||||||| |||||    
T  48640811 tcatctaaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt 48640761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 293 - 446
Target Start/End: Complemental strand, 12140970 - 12140817
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||| ||    
T  12140970 atccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaattt 12140871  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  12140870 catctaaaagaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 12140817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 473
Target Start/End: Complemental strand, 40450210 - 40450031
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||    
T  40450210 atccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaattt 40450111  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    | |||       || |||||| |||| |||||| |||| |||| ||||| |||| || ||| |||||| || |||||||||    
T  40450110 cttctaaaaatatgcatcgcaacaatatcattcctatcatcttgccttt-ttttttttaaggaaatattttctacacttat 40450031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 292 - 440
Target Start/End: Complemental strand, 11650118 - 11649971
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  11650118 tatccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 11650019  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 440  Q
     |||||       || ||| |||||||||||||| ||||||||| ||||    
T  11650018 ccatct-aaaaaatgcatcacaccaatttcattcctatcctcttgcctt 11649971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 283 - 446
Target Start/End: Complemental strand, 48641135 - 48640972
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| ||| || | ||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||    
T  48641135 ttctacacttatccttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaacc 48641036  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     || ||| |||||||       || |||||||||||||||||| ||| ||||| ||||| ||||    
T  48641035 aaaaaaatttcatctaaaaaaatgcatcgcaccaatttcattcatattctcttgcctttttttt 48640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 446
Target Start/End: Original strand, 16671605 - 16671754
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    |||||| || |||||||| ||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  16671605 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 16671704  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |       || |||||||||||||||||| ||||||||| ||||| ||||    
T  16671705 taaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 16671754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 446
Target Start/End: Original strand, 17645973 - 17646122
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    |||||| || |||||||| ||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  17645973 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 17646072  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |       || |||||||||||||||||| ||||||||| ||||| ||||    
T  17646073 taaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 17646122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 293 - 473
Target Start/End: Complemental strand, 23591740 - 23591560
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||| |  ||||||| ||||| || ||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |     
T  23591740 atccttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattc 23591641  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || ||||||||||||||||||||||||||||  |||| |||| || ||| |||||| || ||| |||||    
T  23591640 catctgaaaaaatgcatcgcaccaatttcattcttatcctcttggcttttttttttttaaggaaatattttctactcttat 23591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 291 - 446
Target Start/End: Original strand, 22324278 - 22324433
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||||  |||| |||||||| |||| ||||||||| ||||||| |||||||||||     
T  22324278 ttatctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaat 22324377  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  22324378 ttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 22324433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 446
Target Start/End: Complemental strand, 2527059 - 2526909
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||| ||| |||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||| || | |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||       || |||||||||||||||||  ||||||||| ||||| ||||    
T  2526959 ctaaaaaaatgcatcgcaccaatttcatttctatcctcttgcctttttttt 2526909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 11646042 - 11645938
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  || |||| ||| |||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||     
T  11646042 ttatccttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaat 11645943  T
Q  391 ttcat 395  Q
    |||||    
T  11645942 ttcat 11645938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 290 - 446
Target Start/End: Complemental strand, 11646509 - 11646353
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||||||  || |||| ||| |||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  11646509 cttatccttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 11646410  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     | ||| |       || || ||||||||||||||| ||||||||| ||||| ||||    
T  11646409 ttccatataaaaaaatgcatagcaccaatttcattcctatcctcttgcctttttttt 11646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 27716421 - 27716322
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||||| ||| |  | |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27716421 cttatccttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaa 27716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 298 - 473
Target Start/End: Complemental strand, 45419947 - 45419771
Alignment:
Q  298 tatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||||||| ||| ||||||||| ||||||| ||| ||  | ||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |       || |||||||||||||||||  |||||||||  | || |||| ||||||||||||| || |||||||||    
T  45419847 taaaaaaatgcatcgcaccaatttcatttctatcctcttgtccttttttttttgaagaaaatattttctacacttat 45419771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 293 - 432
Target Start/End: Complemental strand, 16492653 - 16492515
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| |||| ||||||||| || ||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||    
T  16492653 atccttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaacaaattt 16492555  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcct 432  Q
    |||||       || ||||||| |||||||||| ||||||    
T  16492554 catctaaaaaagtgcatcgcactaatttcattcatatcct 16492515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 326 - 441
Target Start/End: Original strand, 18487180 - 18487295
Alignment:
Q  326 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 425  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||       || ||| ||||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattc 18487279  T
Q  426 ttatcctcttaccttt 441  Q
     ||||||||| |||||    
T  18487280 ctatcctcttgccttt 18487295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 21224133 - 21224238
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||| |||||||||||||||||| |||||||||||||||||||  |    
T  21224133 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtt 21224232  T
Q  392 tcatct 397  Q
    ||||||    
T  21224233 tcatct 21224238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 473
Target Start/End: Original strand, 16671241 - 16671422
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaattt-aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||||||     
T  16671241 tatccttatttattaattttgttaggtctgcagcaattttaaccaaatattttcc-gctcatttgctctattaggtttgcaattatttaacctaacaaat 16671339  T
Q  391 ttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||        || ||||||||| |||||||| ||||||||| ||||| |||| || ||| |||||| || |||||||||    
T  16671340 ttcatctaaaaaaaatgcatcgcaccagtttcattcctatcctctttccttt-ttttttttaaggaaatattttttacacttat 16671422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 473
Target Start/End: Original strand, 17645609 - 17645790
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaattt-aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||||||     
T  17645609 tatccttatttattaattttgttaggtctgcagcaattttaaccaaatattttcc-gctcatttgctctattaggtttgcaattatttaacctaacaaat 17645707  T
Q  391 ttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||        || ||||||||| |||||||| ||||||||| ||||| |||| || ||| |||||| || |||||||||    
T  17645708 ttcatctaaaaaaaatgcatcgcaccagtttcattcctatcctctttccttt-ttttttttaaggaaatattttttacacttat 17645790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 397
Target Start/End: Complemental strand, 22774021 - 22773916
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||||||| || |||||||||||||||| ||||||||     
T  22774021 ttatccttatttattaattttgttacgtctgcaacaatttaacctaattt-ttcccgctcatttgctttactatgtttgcaattatttaatctaacaaat 22773923  T
Q  391 ttcatct 397  Q
    |||||||    
T  22773922 ttcatct 22773916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 435
Target Start/End: Original strand, 35124721 - 35124863
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||| ||||| ||| |||| ||||||||| |||||| ||   | ||||||||||||||||||||||||||||||||||||||||| |     
T  35124721 atccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaattc 35124820  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    | |||       || |||||||||||||||||| |||||||||    
T  35124821 cgtctaaaaaaatgcatcgcaccaatttcattcctatcctctt 35124863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 2354778 - 2354678
Alignment:
Q  289 acttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    |||||| ||||||||||||||||||| ||| |||| ||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||  ||||||    
T  2354778 acttattcttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaa 2354679  T
Q  389 a 389  Q
    |    
T  2354678 a 2354678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 473
Target Start/End: Complemental strand, 2853329 - 2853143
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||| |||||||||||||||   | || |||||||||||||||||| ||  | | ||||||| |||||||||||||||||||||||||||||||||    
T  2853329 ttatccttgtttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaa 2853230  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc---tttattttgttgaagaaaatatgttatacacttat 473  Q
     |||||||       || |||||||||||||||||  ||||||| | ||   ||| |||| ||||||||||||| || |||||||||    
T  2853229 tttcatctaaaaaaatgcatcgcaccaatttcatttctatcctcctgccttttttttttttttgaagaaaatattttctacacttat 2853143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 296 - 447
Target Start/End: Original strand, 34837441 - 34837591
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||| |||||||| ||| | || ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  34837441 cttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaacaaatttcat 34837539  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttg 447  Q
    ||       || ||||||| |||||||||  ||||||||| ||||| |||||    
T  34837540 ctaaaaaaatgcatcgcacaaatttcatttatatcctcttgccttttttttg 34837591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 11646620 - 11646705
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta 375  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||||||||||||||    
T  11646620 cttatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 34837183 - 34837280
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||| ||| || | ||| |||||||||||||||||| ||||||||||||||||||||    
T  34837183 atccttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaa 34837280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 397
Target Start/End: Complemental strand, 48641546 - 48641447
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||||| ||  || ||||  || |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattt-ttcctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 32278245 - 32278158
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 380  Q
    ||||||||||||||||| ||||  || |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  32278245 atccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 19222100 - 19222198
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||||| ||  | | |||||||||||||||||||| ||||||||||||||||||||    
T  19222100 tatccttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaa 19222198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 446
Target Start/End: Complemental strand, 11646312 - 11646166
Alignment:
Q  299 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 398  Q
    ||||||||||||||||  || |||| ||| |||||||||||| || |  |||||||||||| ||||||||||||||||||||||||||||| | | |||     
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattccgtct- 11646214  T
Q  399 nnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
          || |||||||||||||||||| ||||||||| ||||| ||||    
T  11646213 aaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 11646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 46264393 - 46264296
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||  || |||| ||| | |||||||||| || ||  ||||||||||||||||||||||||||||||||||||||||||    
T  46264393 atccttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaa 46264296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 4681227 - 4681162
Alignment:
Q  320 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 4681162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 21128036 - 21128132
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| |||| || ||||||||||| | || | ||| ||||||||||||| |||| || |||||||||||||||||    
T  21128036 atccttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaa 21128132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 30991452 - 30991552
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    ||||||||||||||| ||||||| |  || |||| ||||||||| |||||| ||  | ||||||||||||||||| ||||||||||||||||||||||||    
T  30991452 cttatccttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaa 30991551  T
Q  389 a 389  Q
    |    
T  30991552 a 30991552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 1566591 - 1566513
Alignment:
Q  320 tgcatcaatttaacctaatttattcct-gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct 397  Q
    |||| |||||||||||||||| ||  | || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  1566591 tgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatct 1566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 473
Target Start/End: Complemental strand, 16362788 - 16362620
Alignment:
Q  304 ttaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnn 403  Q
    |||||||| || ||| |||| |||| ||| ||||||| || | ||||||||| |||||||| |||||| ||||||||||||||||| ||||||           
T  16362788 ttaattttattaggtatgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatcaaataaa 16362689  T
Q  404 ntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
     || ||||||||||| ||||||  |||||||| ||||| |||| || || ||||||| || |||||||||    
T  16362688 atgcatcgcaccaatatcattc-catcctcttgccttttttttttttaaaaaaatattttctacacttat 16362620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 43059223 - 43059283
Alignment:
Q  329 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaa 43059283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 397
Target Start/End: Complemental strand, 4681700 - 4681603
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||||  || |||| ||||||||| |||||| |||| | |   ||||||||||||||||||||||||||||| ||||||| |||||    
T  4681700 cttatttattaattttgttacgtctgcagcaatttaacttaattt-ttcccgtt---ttgctttattaggtttgcaattatttaacttaacaaatttcat 4681605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 23591309 - 23591238
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta 363  Q
    ||||||||||||| ||||||||| ||| | |  |||||||||||||||| |||| |||||||||||||||||    
T  23591309 tatccttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttatta 23591238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 4454918 - 4455016
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||| || ||| |||| ||| |||||||||| | ||||  |  ||||||| ||||||||| ||| | |||||||||||||||    
T  4454918 ttatccttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaacaaa 4455016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 40686943 - 40686905
Alignment:
Q  351 atttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40686943 atttgctttattaggtttgcaattatttaacctaacaaa 40686905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 34837383 - 34837431
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  34837383 tatccttatttattaattttgttaggtctgcaacaatttaacctaattt 34837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 34837650 - 34837698
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    ||||||||||||||| ||||||| ||| |||| ||||||||||||||||    
T  34837650 tatccttatttattagttttgttaggtatgcagcaatttaacctaattt 34837698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 473
Target Start/End: Complemental strand, 27712630 - 27712564
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttat-tttgttgaagaaaatatgttatacacttat 473  Q
    |||||||||||||||||||||||||||| ||||| | ||| |||||  |||||| || |||||||||    
T  27712630 atcgcaccaatttcattcttatcctcttgcctttttcttttttgaatgaaatattttctacacttat 27712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 4455363 - 4455408
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaat 338  Q
    ||||||||||||||||||| || ||| |||| ||||||||||||||    
T  4455363 atccttatttattaattttattaggtctgcaacaatttaacctaat 4455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 292 - 441
Target Start/End: Complemental strand, 28612344 - 28612195
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  28612344 tatccttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 28612245  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
     |||||       || |||||||||||||||||| ||||||||| |||||    
T  28612244 ccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt 28612195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 324 - 479
Target Start/End: Complemental strand, 5001778 - 5001624
Alignment:
Q  324 tcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcat 423  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||       || ||||||||||||||||    
T  5001778 tcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcat 5001679  T
Q  424 tcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||  |||||||| ||||| |||| ||||||||||||| || |||||||||||||||    
T  5001678 tccgatcctcttgccttt-tttttttgaagaaaatattttttacacttatccttat 5001624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 292 - 471
Target Start/End: Original strand, 44256468 - 44256647
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||| ||||||||||||| ||| |||||||||||| ||| |    
T  44256468 tatctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaatt 44256567  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacactt 471  Q
    ||||||       || |||||||||||||||||  ||||||||| ||||| |||| ||||| ||||||| || |||||||    
T  44256568 tcatctaaaaaaatgcatcgcaccaatttcatttctatcctcttgcctttttttttttgaaaaaaatattttctacactt 44256647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 296 - 446
Target Start/End: Complemental strand, 28612128 - 28611978
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| |||  | ||    
T  28612128 cttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaaaaaaaattat 28612029  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||       || |||||||||||||||||||||||||||| ||||| ||||    
T  28612028 ctaaaaaaatgcatcgcaccaatttcattcttatcctcttgcctttttttt 28611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 290 - 435
Target Start/End: Original strand, 11735903 - 11736047
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||| | |||| |||||||||||| || |||||||||||||||||||||||||||    
T  11735903 cttatccttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaa 11736001  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     |||||||       || |||||||| |||||||||||||||||||    
T  11736002 tttcatctaaaaaaatgcatcgcaccgatttcattcttatcctctt 11736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 41995865 - 41995710
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||| ||||||||||||||||||  || || | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  41995865 ttatctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaat 41995766  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    | |||||       || ||||||| |||||||||| ||||||||| ||||| ||||    
T  41995765 tccatctaaaaacatgcatcgcacgaatttcattcctatcctcttgcctttttttt 41995710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 479
Target Start/End: Complemental strand, 5001638 - 5001447
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||| |||  | |||||||||||||||||||  || |||||||||||||    
T  5001638 tacacttatccttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaa 5001539  T
Q  386 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
     ||| |||||||       || ||||||||||||| |||| ||||||||| ||||  || | || |||||||||| || |||||||||||||||    
T  5001538 aaaatttcatctaaaaaaatgcatcgcaccaatttaattcctatcctcttgcctt--ttgtttttaagaaaatattttctacacttatccttat 5001447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 28611919 - 28611765
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||  |    
T  28611919 tatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagtt 28611820  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     |||||       || ||||||||||| |||||| ||||| ||| ||||| ||||    
T  28611819 ccatctaaaaaaatgcatcgcaccaatatcattcctatccccttgcctttttttt 28611765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 28612766 - 28612614
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||  |||| |||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||| |    
T  28612766 tatccttatttattaattttgttaggc-tgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatt 28612669  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  28612668 tcatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 28612614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 10129606 - 10129454
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||| |      
T  10129606 tccttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaattct 10129507  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||       |  |||||||||||||||||| ||||||||| ||||| ||||    
T  10129506 atctaaaaaaattcatcgcaccaatttcattcctatcctcttgcctttttttt 10129454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 28612556 - 28612403
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||  |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||||| ||| |    
T  28612556 tatccttatttattaattttgttaggc-tgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaatt 28612458  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    | ||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  28612457 ttatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 28612403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 473
Target Start/End: Original strand, 6348066 - 6348246
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  || |||| ||||||||| |||||| |||  ||||| ||||||||||||||||||||||||||||  |||||||     
T  6348066 ttatccttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaat 6348165  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||       || |||||||||||||||||   |||||||| ||||  |||| ||||||||||||| || | |||||||    
T  6348166 ttcatctaaaaaaatgcatcgcaccaatttcatttcgatcctcttgcctt--tttttttgaagaaaatattttcttcacttat 6348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 470
Target Start/End: Original strand, 29550119 - 29550311
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttat----taggtttgcaattattt 378  Q
    ||||||| ||||||||||||||||||||| || ||| |||| |||||||||||||||| || | |||||||||||||||    |||||||||||||||||    
T  29550119 ttctacatttatccttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattattt 29550218  T
Q  379 aacctaacaaacttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacact 470  Q
    ||||||||||| |  ||||        || |||||||||||||||||  |||| |||| ||||| |||| ||||||||||||| || ||||||    
T  29550219 aacctaacaaattcaatctaaaaaaaatgcatcgcaccaatttcattactatcttcttgcctttttttttttgaagaaaatattttctacact 29550311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 293 - 473
Target Start/End: Complemental strand, 37131597 - 37131418
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| | | |||| |||||||||||||||| || |  |||||||||||||||| ||||||||||||||||| ||||||| ||    
T  37131597 atccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaattt 37131499  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || ||| |||||||||||||| |||||||||  | || |||| ||||||  ||||| || |||||||||    
T  37131498 catctaaaaaaatgcatcacaccaatttcattcctatcctcttgtcattttttttttgaagggaatattttctacacttat 37131418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 44543835 - 44543733
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||||| ||||||||||||||||||||  ||  ||| |||||||||||||||| | || |||||||||||||||| |||||||||||||||||||    
T  44543835 ttctacacttaaccttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacc 44543736  T
Q  383 taa 385  Q
    |||    
T  44543735 taa 44543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 388
Target Start/End: Original strand, 627531 - 627628
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||| ||||||||  |||||||||||||||||||||||    
T  627531 ttatccttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 29549944 - 29550050
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||  ||||||||||||||| |||  | |||||||||||||||||||||  |||||||||||    
T  29549944 ttctacatttatcctcatttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacc 29550043  T
Q  383 taacaaa 389  Q
    |||||||    
T  29550044 taacaaa 29550050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 342 - 479
Target Start/End: Original strand, 6347938 - 6348075
Alignment:
Q  342 ttcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||       | ||||||||||||||||||| ||||||||| |||||    
T  6347938 ttcccgctcatttgctttattag-tttacaattatttaacctaacaaatttcatctaaaaaattatatcgcaccaatttcattcctatcctcttgccttt 6348036  T
Q  442 attttg-ttgaagaaaatatgttatacacttatccttat 479  Q
     ||||| ||||||||||||| || || | ||||||||||    
T  6348037 tttttgtttgaagaaaatattttctatatttatccttat 6348075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 446
Target Start/End: Complemental strand, 28612979 - 28612825
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattagg-tttgcaattatttaacctaacaaact 391  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||  | ||||||| ||||||||| ||| ||||||||||| |||||||| |    
T  28612979 atccttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaatt 28612880  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     |||||       || |||||||||||||||||| ||| ||||| ||||| ||||    
T  28612879 ccatctaaaataatgcatcgcaccaatttcattcctattctcttgcctttttttt 28612825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 446
Target Start/End: Complemental strand, 3249909 - 3249756
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| | | |||| |||||||||||||| | || | ||| ||||||| ||||||||| ||| | ||||||||||||||| ||    
T  3249909 atccttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaattt 3249810  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||       || |||||||||||||||||| |||| |||| ||||| ||||    
T  3249809 catctaaaaaaatgcatcgcaccaatttcattcctatcatcttgcctttttttt 3249756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 479
Target Start/End: Complemental strand, 5001430 - 5001296
Alignment:
Q  347 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttatt 444  Q
    ||||||||||||||||||||||||||||||||||||||| ||  | |||||       || |||||||||||||||||| ||||||||| ||  ||| ||    
T  5001430 gctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 5001331  T
Q  445 ttgttgaagaaaatatgttatacacttatccttat 479  Q
    || || |||||||||| || |||||||||||||||    
T  5001330 ttttttaagaaaatattttctacacttatccttat 5001296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 11736329 - 11736450
Alignment:
Q  325 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcatt 424  Q
    |||||||||||||| | |||| |||||||||||| || ||||||||||||||||||||||||||| |||||||       || |||||||||||||||||    
T  11736329 caatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 11736428  T
Q  425 cttatcctcttacctttatttt 446  Q
      |||| |||| ||||| ||||    
T  11736429 tctatcatcttgcctttttttt 11736450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 389
Target Start/End: Complemental strand, 5013301 - 5013210
Alignment:
Q  298 tatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||  || |||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||||||  |||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaatttaacaaa 5013210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 29549785 - 29549929
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||| ||||||||| ||||||||| ||| | || | ||||||| || ||| || | |||||||||||||||||||||| |||||||||||||||| |||     
T  29549785 ttattcttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaat 29549884  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |||||||       || | |||||||||||||||| |||||||||    
T  29549885 ttcatctaaaaaaatgcaccgcaccaatttcattcctatcctctt 29549929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 292 - 435
Target Start/End: Complemental strand, 3249693 - 3249550
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||| | |||| ||||||||||| |||||||||  || | ||||||||||||||  |    
T  3249693 tatccttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaacaattt 3249594  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    ||||||       |  |||||||||||||||||  |||||||||    
T  3249593 tcatctaaaaaaatacatcgcaccaatttcatttatatcctctt 3249550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 41326372 - 41326507
Alignment:
Q  300 tttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnn 399  Q
    ||||||||||||||| ||| |||| ||||||||| |||||| | || ||||||||| ||||||| ||||||||||||||||||||| |||  | ||||      
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaataaatcttatctaa 41326471  T
Q  400 nnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
         || |||||||||||||||||  |||||||||    
T  41326472 aaaaatgcatcgcaccaatttcatttctatcctctt 41326507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 479
Target Start/End: Complemental strand, 5013100 - 5012966
Alignment:
Q  347 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattt 445  Q
    ||||||||||||||||||||||||||||||||||||||| ||  | |||||       || |||||||||||||||||| ||||||||| || ||| |||    
T  5013100 gctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 5013001  T
Q  446 tgttgaagaaaat-atgttatacacttatccttat 479  Q
    | || |||||||| || || |||||||||||||||    
T  5013000 tttttaagaaaataattttctacacttatccttat 5012966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 12898019 - 12898115
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| | | |||| ||||||||||| || | || | |||||||| |||| |||||||||||||||||||| ||||||||    
T  12898019 atccttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaa 12898115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 446
Target Start/End: Original strand, 627629 - 627725
Alignment:
Q  350 catttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 627725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 44543714 - 44543606
Alignment:
Q  371 aattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacact 470  Q
    ||||||||||||||||||| |||||||       || ||| |||||||||||||| ||||||||| | ||| |||| ||||||||||||| || ||||||    
T  44543714 aattatttaacctaacaaatttcatctaaaagaatgcatcacaccaatttcattcctatcctcttgcttttttttttttgaagaaaatattttctacact 44543615  T
Q  471 tatccttat 479  Q
    |||||||||    
T  44543614 tatccttat 44543606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 44544037 - 44543944
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||||||  ||  ||| ||||||||| |||||| ||||  ||||||||| |||||| ||||| |||||||||||||||    
T  44544037 tatccttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaa 44543944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 12896533 - 12896444
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||  || | || ||||||||| |||| | || | ||||||||| |||||||||||||||||||||||| ||||    
T  12896533 cttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaa 12896444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 368
Target Start/End: Complemental strand, 2132310 - 2132238
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 368  Q
    |||||||||||| |||||| ||| |||| |||||||||||||||| |  ||||||||||||||| ||||||||    
T  2132310 cttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 20708899 - 20708980
Alignment:
Q  360 attaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||| ||||||||||||||||||||||||| |||||||       || ||||||||||||||||||||| |||||| |||||    
T  20708899 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattcttaccctcttgccttt 20708980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 473
Target Start/End: Original strand, 11657483 - 11657623
Alignment:
Q  328 tttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattctt 427  Q
    ||||||||||||| |||  | ||||||||||||   |||||||||||||||||| ||||||| |||||||       || |||||||||||||||||| |    
T  11657483 tttaacctaattttttctcgttcatttgcttta---ggtttgcaattatttaac-taacaaatttcatctaaaaaaatgcatcgcaccaatttcattcct 11657578  T
Q  428 atcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||| |||| ||||| |||| || ||| |||||| || |||||||||    
T  11657579 atcatcttgccttt-ttttttttaaggaaatattttctacacttat 11657623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 44543623 - 44543574
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaa 332  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  44543623 ttctacacttatccttatttattaattttgttaggtctgcagcaatttaa 44543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 5001313 - 5001268
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaat 328  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5001313 ttctacacttatccttatttattaattttgttaggtctgcagcaat 5001268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 5012983 - 5012938
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaat 328  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5012983 ttctacacttatccttatttattaattttgttaggtctgcagcaat 5012938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 311
Target Start/End: Complemental strand, 5001464 - 5001436
Alignment:
Q  283 ttctacacttatccttatttattaatttt 311  Q
    |||||||||||||||||||||||||||||    
T  5001464 ttctacacttatccttatttattaatttt 5001436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 311
Target Start/End: Complemental strand, 5013134 - 5013106
Alignment:
Q  283 ttctacacttatccttatttattaatttt 311  Q
    |||||||||||||||||||||||||||||    
T  5013134 ttctacacttatccttatttattaatttt 5013106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 5013186 - 5013117
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||||||||||||| |||| ||||||||| ||||  || | || |||||||||| || |||||||||||||||    
T  5013186 atcgcaccaatttaattcctatcctcttgcctt--ttgtttttaagaaaatattttctacacttatccttat 5013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 293 - 473
Target Start/End: Original strand, 318551 - 318730
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||| ||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |     
T  318551 atccttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 318650  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| |||| ||||||||||||| || |||||||||    
T  318651 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttttttgaagaaaatattttctacacttat 318730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 283 - 479
Target Start/End: Original strand, 51113892 - 51114093
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||    
T  51113892 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacc 51113991  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc---tttattttg--ttgaagaaaatatgttatacacttatcctt 477  Q
    ||||||| | |||||       || |||||||||||||||||| ||||||||| ||   ||| |||||  ||||||||||||| || |||| ||||||||    
T  51113992 taacaaattccatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcccttttttttttgttttgaagaaaatattttctacatttatcctt 51114091  T
Q  478 at 479  Q
    ||    
T  51114092 at 51114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 479
Target Start/End: Complemental strand, 42497411 - 42497214
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||| |||||||||||||||||||| | ||| |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  42497411 ttctacactaatccttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacc 42497312  T
Q  383 taacaaacttcatct--nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||||||| |||||||         || || ||||||||||||||| ||||||||| | ||| ||||| |||||||||||| || ||||||| |||||||    
T  42497311 taacaaatttcatctgaaaaaaaatgcattgcaccaatttcattcctatcctcttgctttttttttg-tgaagaaaatattttctacacttctccttat 42497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 291 - 473
Target Start/End: Original strand, 5428522 - 5428704
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||     
T  5428522 ttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaat 5428621  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttac-ctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||       ||  ||||||||||||||||| ||||||||| |  ||| ||||||||||| |||||| || |||||||||    
T  5428622 ttcatct-aaaaaatgcttcgcaccaatttcattcctatcctcttgcatttttttttgttgaaggaaatattttctacacttat 5428704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 1156174 - 1155991
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    ||||||||||||||| |||||  |  |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  1156174 tccttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcc 1156075  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc----tttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||       || |||||||||||||||||||||||||||| ||    ||| |||| ||||||||||||| || |||||||||    
T  1156074 atctaaaaaaatgcatcgcaccaatttcattcttatcctcttgcctttttttttttttttgaagaaaatattttctacacttat 1155991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 291 - 473
Target Start/End: Original strand, 1647537 - 1647719
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||| ||| |||| || |||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||||     
T  1647537 ttatccttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaat 1647636  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||       || |||||||||||||||||  |||| |||| ||||| |||| || ||| |||||| || |||||||||    
T  1647637 ttcatctaaaaaaatgaatcgcaccaatttcatttctatcatcttgccttttttttttttaaggaaatattttctacacttat 1647719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 290 - 473
Target Start/End: Complemental strand, 42492278 - 42492089
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  42492278 cttatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaa 42492179  T
Q  390 cttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacc-----tttattttgttgaagaaaatatgttatacacttat 473  Q
     | |||||        || |||||||||||||||||| ||||||||| ||     ||| |||| ||||||||||||| || |||||||||    
T  42492178 ttccatctaaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctgttttttttttttttgaagaaaatattttctacacttat 42492089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 21617756 - 21617931
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||| |||||||||||| ||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21617756 ttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 21617855  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |       || ||||||| |||||||||  ||||||||| ||||| |||| || ||| |||||| || |||||||||    
T  21617856 taaaaaaatgcatcgcactaatttcatttctatcctcttgccttt-ttttttttaaggaaatattttctacacttat 21617931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 473
Target Start/End: Original strand, 38684011 - 38684194
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||||||||| |||||||||||||||||| |     
T  38684011 atccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattc 38684110  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttg-aagaaaatatgttatacacttat 473  Q
    |||||       || |||||||||||||||||  ||||||||| ||  ||| |||||||| ||| |||||| ||||||||||||    
T  38684111 catctaaaaaaatgcatcgcaccaatttcatttctatcctcttgccttttttttttgttgaaaggaaatattttatacacttat 38684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 51113719 - 51113909
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||||||| ||    
T  51113719 atccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaattt 51113818  T
Q  393 catct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacc---tttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||        || |||||||||||||||||| |||||| || ||   ||| |||| ||||||||||||| || |||||||||||||||    
T  51113819 catctaaaaaaaatgcatcgcaccaatttcattcctatccttttgccttttttttttttttgaagaaaatattttctacacttatccttat 51113909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 296 - 446
Target Start/End: Original strand, 44263088 - 44263238
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||||  || |||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| | |||    
T  44263088 cttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccat 44263187  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  44263188 ctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 44263238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 286 - 473
Target Start/End: Original strand, 27296326 - 27296510
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||    
T  27296326 tacacttatccttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaa 27296425  T
Q  386 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||| |||||||       |  ||||||||||||||||||  |||||||  |||   |||| || |||||||||| || |||||||||    
T  27296426 caaatttcatctataaaaatacatcgcaccaatttcattccaatcctctagcct---ttttttttaagaaaatattttctacacttat 27296510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 292 - 435
Target Start/End: Complemental strand, 16165797 - 16165653
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| || | |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| |    
T  16165797 tatccttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatt 16165698  T
Q  392 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    ||||||        || |||||||||||||||||| |||||||||    
T  16165697 tcatctaaaaaaaatgcatcgcaccaatttcattcctatcctctt 16165653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 51114076 - 51114182
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| ||||||||||||||||||||||||  || || | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  51114076 ttctacatttatccttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacc 51114175  T
Q  383 taacaaa 389  Q
    |||||||    
T  51114176 taacaaa 51114182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 473
Target Start/End: Complemental strand, 3227333 - 3227153
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |    
T  3227333 tatccttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatt 3227235  T
Q  392 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
     |||||        || || ||||||||||||||| ||||||||| | ||| |||| |||||| |||||| || |||||||||    
T  3227234 ccatctaaaaaaaatgcattgcaccaatttcattcctatcctcttgcattt-tttttttgaaggaaatattttctacacttat 3227153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 27296158 - 27296340
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||| ||| |     
T  27296158 atccttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattc 27296257  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||       || |||||||||||||||||| ||||||||| ||||  |||| || |||||||||| || |||||||||||||||    
T  27296258 catct-aaaaaatgcatcgcaccaatttcattcatatcctcttgcctt--ttttttttaagaaaatat-ttttacacttatccttat 27296340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 44263303 - 44263402
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||    
T  44263303 cttatccttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaa 44263402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 42497053 - 42496947
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| |||| ||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  42497053 ttctacaattatgcttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacc 42496954  T
Q  383 taacaaa 389  Q
    |||||||    
T  42496953 taacaaa 42496947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 5428919 - 5429025
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| | | |||| |||||||| ||||||| || | |||||| ||||||||||||||||||||||||||| |    
T  5428919 ttctacacttatccttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagc 5429018  T
Q  383 taacaaa 389  Q
    |||||||    
T  5429019 taacaaa 5429025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 51272600 - 51272510
Alignment:
Q  295 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||| ||| | || |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  51272600 ccttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaa 51272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 293 - 446
Target Start/End: Original strand, 52740696 - 52740850
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| || | |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||| |     
T  52740696 atccttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattc 52740795  T
Q  393 catct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     ||||        || |||||||||||||||||| ||||||||| ||||| ||||    
T  52740796 aatctaaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 52740850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 5429044 - 5429144
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt----cctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||    || ||||| ||||||||||||||||||||||||||||||||||||    
T  5429044 atccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaacaa 5429143  T
Q  389 a 389  Q
    |    
T  5429144 a 5429144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 283 - 374
Target Start/End: Complemental strand, 28950107 - 28950016
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatt 374  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||    
T  28950107 ttctacacttatccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 479
Target Start/End: Complemental strand, 28950274 - 28950090
Alignment:
Q  299 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 398  Q
    ||||||||||||||||  ||  ||| ||||||||| |||||| || | || ||||||||||||||| |||| ||||||||||||||||||| |||||||     
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatcta 28950175  T
Q  399 nnnnnntgtatcgcaccaatttcattcttatcctcttacct----ttattttgttgaagaaaatatgttatacacttatccttat 479  Q
          || ||| |||||||||||||| ||||||||| |||    || |||| ||||||||||||| || |||||||||||||||    
T  28950174 aaaaaatgcatctcaccaatttcattcctatcctcttgcctcttcttttttttttgaagaaaatattttctacacttatccttat 28950090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 473
Target Start/End: Complemental strand, 44099747 - 44099602
Alignment:
Q  326 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 425  Q
    ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| ||| |||||||       || || |||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct--aaaaatgcattgcaccaatttcattc 44099650  T
Q  426 ttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
     ||||||||| | ||| |||| ||||||||||||| || |||||||||    
T  44099649 ctatcctcttgcttttttttttttgaagaaaatattttttacacttat 44099602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 44262659 - 44262756
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||| || |  |||||||||||||||| |||||||||||||||||||||||||    
T  44262659 tatctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaa 44262756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 28950368 - 28950277
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||||  || | || |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  28950368 tccttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 446
Target Start/End: Complemental strand, 4100890 - 4100749
Alignment:
Q  305 taattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnn 404  Q
    |||||||||| ||| |||| |||||||| ||||||| || | ||||||| | |||||||| |||||||||||||||||||| ||| |||||||           
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatctaaaaaaa 4100791  T
Q  405 tgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    || |||||||||||||||||  ||||||||| ||||||||||    
T  4100790 tggatcgcaccaatttcatttctatcctcttgcctttatttt 4100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 6537757 - 6537669
Alignment:
Q  301 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||| |||  ||| ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaa 6537669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 473
Target Start/End: Original strand, 12115359 - 12115482
Alignment:
Q  351 atttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgtt 449  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||       || |||||||||||||||||| |||||| ||||| ||| |||| ||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcatatccttttacctttttttttttt 12115458  T
Q  450 gaagaaaatatgttatacacttat 473  Q
     |||||||||| || |||||||||    
T  12115459 taagaaaatattttctacacttat 12115482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 446
Target Start/End: Original strand, 18912326 - 18912477
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttg-caattatttaacctaacaaacttca 394  Q
    |||||||||||||||||||  || |||| |||||||||||||||| || | || ||||||||||||||||||||  ||||||||||| ||||||| ||||    
T  18912326 cttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttca 18912425  T
Q  395 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||       || || ||| ||||||||||| ||||||||| ||||| ||||    
T  18912426 tctaaaaaaatgcatagcatcaatttcattcctatcctcttgcctttttttt 18912477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 479
Target Start/End: Complemental strand, 42497575 - 42497394
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    ||||||||||||||||||| ||| ||||  |||||||| |||||| ||   ||||||||  ||||||||||||| ||||||||||| ||||||| |||||    
T  42497575 cttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcat 42497476  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
     |       |||||||||||||||||||| ||||||||||  |||| |||| || ||||||| || || |||||| ||||||||    
T  42497475 -ttaaaaaatgtatcgcaccaatttcattattatcctcttgtcttt-ttttttttaagaaaacattttctacactaatccttat 42497394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 4100691 - 4100543
Alignment:
Q  298 tatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||||||| ||| ||||  ||||||||||||||| || || ||||||||| ||||||| ||||||||||||||||| ||||||| |||||     
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcata 4100592  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttg 447  Q
    |        | |||||||||||||||||||||||||| | ||||| |||||    
T  4100591 taaaaaa--gcatcgcaccaatttcattcttatcctcatgccttttttttg 4100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 385
Target Start/End: Original strand, 24595224 - 24595316
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||||||||||||  |       ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24595224 tacacttatccttatttattaattttgttatg-------caatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaa 24595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 479
Target Start/End: Original strand, 24595086 - 24595238
Alignment:
Q  325 caatttaacctaatttattcctgctcatttgctttattaggtttgcaat--tatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttca 422  Q
    |||||||||||||||| |||  ||| | || ||||||||||||||||||  |||||||||||||||| |||||||       || |||||||||||||||    
T  24595086 caatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaacaaatttcatctaacaaaatgcatcgcaccaatttca 24595185  T
Q  423 ttcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    ||  ||||||||| ||||| ||||    |||||||||| || |||||||||||||||    
T  24595186 tttctatcctcttgcctttttttt----aagaaaatattttttacacttatccttat 24595238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 388
Target Start/End: Original strand, 33375627 - 33375721
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 388  Q
    |||||||||||||||||||||  || |  | |||||||||||||||| |  | |||||||| |||||||||||||||||||||||||||||||||    
T  33375627 tccttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 283 - 381
Target Start/End: Complemental strand, 42497231 - 42497133
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    |||||||||| ||||||||||||||||||||| | | | || |||||||||||||||| |||   | ||||||||||||||||||| ||||||||||||    
T  42497231 ttctacacttctccttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaac 42497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 395
Target Start/End: Complemental strand, 28949995 - 28949900
Alignment:
Q  299 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    ||||||||||||||||  || || | | |||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||| |||||    
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattt-ttcccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcat 28949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 441
Target Start/End: Original strand, 52584966 - 52585078
Alignment:
Q  329 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattctta 428  Q
    |||||||||||| ||||  || ||||||||||||| ||||| ||||||||||||||||||| |||||||       || || ||||||||||||||| ||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatctaaaaaaatgaattgcaccaatttcattcata 52585065  T
Q  429 tcctcttaccttt 441  Q
    ||||||| |||||    
T  52585066 tcctcttgccttt 52585078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 18912215 - 18912316
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttg-caattatttaacctaacaaacttcat 395  Q
    ||||||||||||||||||  || |||| |||||||| ||||||| || | |||||||| ||||||||||||||  ||||||||||| ||||||| |||||    
T  18912215 ttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttcat 18912314  T
Q  396 ct 397  Q
    ||    
T  18912315 ct 18912316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 441
Target Start/End: Original strand, 43761941 - 43762091
Alignment:
Q  292 tatccttatttattaatttt-gttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||| ||| ||| | || |||||||||||||| | |||| | ||||||  | ||||||||| ||| | |||||| ||||||||     
T  43761941 tatccttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaacaaat 43762040  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||||||       || |||||||||||||||||| ||| |||||||||||    
T  43762041 ttcatctaaaaaagtgcatcgcaccaatttcattcctatactcttaccttt 43762091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 6537541 - 6537465
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 368  Q
    ||||||||||||||||||||||| ||| || | ||||||||| |||||| ||||  |||||||||||||||||||||    
T  6537541 tatccttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 473
Target Start/End: Complemental strand, 45417655 - 45417531
Alignment:
Q  348 ctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttg 447  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||       || |||||||||||||||||| |||  |||| ||||| ||||     
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaacaaattaaatctaaaaaaatgcatcgcaccaatttcattcctattgtcttgccttt-ttttt 45417557  T
Q  448 ttgaagaaaatatgttatacacttat 473  Q
    || ||| |||||| || |||||||||    
T  45417556 tttaaggaaatattttctacacttat 45417531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 382
Target Start/End: Original strand, 30083973 - 30084064
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt-attcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||||||||||||||||| |||  ||| |||||||| |||||||  || | ||| ||||||||||||||||||| ||||||||||||    
T  30083973 tatccttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaacc 30084064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 42492403 - 42492332
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||||||||||||||| ||||||||  ||||| |||| ||||||||||||| || | |||||||||||||    
T  42492403 atcgcaccaatttcattcctatcctctagcctttttttttttgaagaaaatattttctgcacttatccttat 42492332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 473
Target Start/End: Original strand, 24595324 - 24595388
Alignment:
Q  408 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    |||||||||||||||||| ||||||||| ||||| |||| || |||||||||| || |||||||||    
T  24595324 atcgcaccaatttcattcctatcctcttgccttt-ttttttttaagaaaatattttctacacttat 24595388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 42492349 - 42492280
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcat 352  Q
    |||| |||||||||||||||||||||||||||  || | || |||||||||||| ||| |||| ||||||    
T  42492349 ttctgcacttatccttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 47790692 - 47790736
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaa 337  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||    
T  47790692 atccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 52740914 - 52740955
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaa 337  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  52740914 cttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 473
Target Start/End: Original strand, 21618069 - 21618133
Alignment:
Q  409 tcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||||||||||||  ||||||||| ||||| |||| ||| || |||||| || |||||||||    
T  21618069 tcgcaccaatttcatttctatcctcttgcctttttttttttgtaggaaatattttctacacttat 21618133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 48553045 - 48552993
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 345  Q
    ||||||||||||||||||||||  || |||| ||| |||||||||||| ||||    
T  48553045 atccttatttattaattttgttaagtttgcagcaacttaacctaattttttcc 48552993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 473
Target Start/End: Original strand, 25068186 - 25068366
Alignment:
Q  295 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt-c 393  Q
    ||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| || |    
T  25068186 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaaattcc 25068285  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||       || |||||||||||||||||| ||||||||| || |||||||| ||||||||||||| || |||| ||||    
T  25068286 atctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccgtttatttttttgaagaaaatattttctacagttat 25068366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 25067958 - 25068143
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||| |||||||||||   | |||| |||||||||||||||| || | ||||||||||||||| ||||||||||||||||||| ||||||| |     
T  25067958 atccttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaatta 25068057  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| |||| || |||||||||| || |||||||||||||||    
T  25068058 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttttttaaagaaaatattttctacacttatccttat 25068143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 290 - 446
Target Start/End: Original strand, 17202843 - 17202999
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||| ||||||||| ||| |||| |||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||||||    
T  17202843 cttatccttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaa 17202942  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     | |||||       || |||||| ||||||||||| ||||||||| ||||| ||||    
T  17202943 ttccatctaaaaaaatgcatcgcatcaatttcattcatatcctcttgcctttttttt 17202999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 446
Target Start/End: Original strand, 17201591 - 17201746
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  || |||| ||||||||||||| || || | ||||||||| |||||||||||||||||||||||||||||||||     
T  17201591 ttatccttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaat 17201690  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||       || |||||||||||||||||  ||||||||| ||||| ||||    
T  17201691 ttcatctaaaaaaatgcatcgcaccaatttcattgctatcctcttgcctttttttt 17201746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 441
Target Start/End: Complemental strand, 17906910 - 17906763
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |     
T  17906910 atccttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattc 17906811  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||||       |||||||||||||||| |||  ||||||||| |||||    
T  17906810 catct-aaaaaatgtatcgcaccaattttatttctatcctcttgccttt 17906763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 9828919 - 9829096
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||| ||||||||||||   | |||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  9828919 ttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 9829018  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 473  Q
    |       || |||||||||||||||||| ||||||||| || ||| |||| ||||||||||||| || || ||||||    
T  9829019 taaaaaaatgcatcgcaccaatttcattcctatcctcttgccttttttttttttgaagaaaatattttctagacttat 9829096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 23622207 - 23622315
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||    
T  23622207 tacacttatccttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaa 23622306  T
Q  386 caaacttca 394  Q
    |||| ||||    
T  23622307 caaatttca 23622315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 27579594 - 27579690
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27579594 atccttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaa 27579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 23610426 - 23610570
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  23610426 ttatccttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaa 23610524  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     | |||||       || |||||||||||||||||  |||||||||    
T  23610525 ttccatctacaaaaatgcatcgcaccaatttcatttctatcctctt 23610570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 441
Target Start/End: Complemental strand, 4811172 - 4811023
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||| ||||||||  || |||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| || |     
T  4811172 atccttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattc 4811073  T
Q  393 catct-nnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||||        || |||||||||||||||||| ||||||||| |||||    
T  4811072 catctaaaaaaaatgaatcgcaccaatttcattcatatcctcttgccttt 4811023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 389
Target Start/End: Complemental strand, 32208524 - 32208421
Alignment:
Q  286 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta-tttaaccta 384  Q
    ||||||||||||||||||||||||||| | ||| |||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  32208524 tacacttatccttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaaccta 32208426  T
Q  385 acaaa 389  Q
    |||||    
T  32208425 acaaa 32208421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 808829 - 808930
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  396 ct 397  Q
    ||    
T  808929 ct 808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 434
Target Start/End: Complemental strand, 26832626 - 26832485
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||| |||||| | | |||| |||||||||||||||| || || ||| ||||||||||||||||||||||||||||||| ||||||| |    
T  26832626 atccttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaatt 26832528  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctct 434  Q
     |||||       || || ||||||||||||||||||||||||    
T  26832527 acatctaaaaaaatgcatagcaccaatttcattcttatcctct 26832485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 27315287 - 27315378
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||| ||| |||| ||| |||||||||||| ||||  || |||||||||||||||||||||||||||||||||||||||    
T  27315287 ttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaacaaa 27315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 460
Target Start/End: Complemental strand, 4100428 - 4100258
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatt----tgctttattaggtttgcaattatttaacctaacaa 388  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | | |||||    |||||||||| |||||||||||||||| |||||||    
T  4100428 atccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaa 4100329  T
Q  389 acttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatat 460  Q
    | | |||||       || |||||||||||||||||  || |||||| ||||| |||| |||||| ||||||    
T  4100328 attccatctaaaaaaatgcatcgcaccaatttcatttctaccctcttgccttt-tttttttgaaggaaatat 4100258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 381
Target Start/End: Original strand, 808468 - 808556
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    |||||||||||||||||||||| | | |||| ||||||||| |||||| |||  |||||||||||||||||| ||||||||||||||||    
T  808468 atccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaac 808556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 17202681 - 17202780
Alignment:
Q  347 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||||       ||||||||||||||||||||  ||||||||| ||||| ||||    
T  17202681 gctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaaaaatgtatcgcaccaatttcattgctatcctcttgcctttttttt 17202780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 446
Target Start/End: Original strand, 17199982 - 17200134
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| ||| || | |||||||||||||| | ||||  |||||||||| |||||||||  || | ||||||||||| ||| ||    
T  17199982 atccttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaataaattt 17200081  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||       || |||||||||||||||||| ||| ||||| ||||| ||||    
T  17200082 catct-aaaaaatgcatcgcaccaatttcattcatattctcttgcctttttttt 17200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 29201553 - 29201624
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta 363  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||    
T  29201553 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttatta 29201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 15130898 - 15130991
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||  || |||| ||| ||||| ||| |  || |  |||||| |||||||||| ||||||||||||||||||||||||    
T  15130898 cttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaa 15130991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 25068126 - 25068183
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    ||||||||||||||||||||||||||||||||  ||||||| | ||||||| ||||||    
T  25068126 ttctacacttatccttatttattaattttgttacgtgtgcagctatttaacataattt 25068183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 4125759 - 4125712
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  4125759 atccttatttattaattttgttaggtctgcagcaatttaacctaattt 4125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 17201809 - 17201857
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 338  Q
    ||||||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  17201809 cttatccttatttataaattttgttaggtatgcagcaatttaacctaat 17201857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 808687 - 808749
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcattt 354  Q
    ||||||||||||||||||||||||  || |||  |||||||||||||||| |||| ||||||||    
T  808687 ttatccttatttattaattttgttatgtctgctgcaatttaacctaattt-ttcccgctcattt 808749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 24223268 - 24223222
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaat 338  Q
    |||||||||||||||||||| || ||| |||||||| ||||||||||    
T  24223268 tatccttatttattaattttatttggtctgcatcaacttaacctaat 24223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 446
Target Start/End: Original strand, 29201621 - 29201695
Alignment:
Q  372 attatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    |||||||||||||||||| |||||||       || ||| |||||||||||||| ||||||||| ||||| ||||    
T  29201621 attatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattcatatcctcttgcctttttttt 29201695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 17080031 - 17080127
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||| ||  || |||| |||  ||||||||| | ||||  |  ||||||| ||||||||| ||| | |||||||||||||||    
T  17080031 atccttatttattaattttattatgtctgcagcaacctaacctaatattttccgtccaatttgctgtattaggttagcattaatttaacctaacaaa 17080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 473
Target Start/End: Original strand, 1197873 - 1198053
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  1197873 tatccttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatt 1197972  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 473  Q
    ||||||       || |||||| ||||||||||| ||||||||| ||||| || | |||||| |||||| || |||| ||||    
T  1197973 tcatct-aaaaaatgcatcgcatcaatttcattcctatcctcttgccttttttattttgaaggaaatattttctacatttat 1198053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 291 - 479
Target Start/End: Complemental strand, 37198410 - 37198223
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||| ||||| ||||| ||||||||||||||     
T  37198410 ttatccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaat 37198311  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    | |||||       || || ||||||||||||||| ||||||||| ||||| |||| || |||||||||| || |||||||||||||||    
T  37198310 tccatctaaaaaaatgcattgcaccaatttcattcctatcctcttgccttt-ttttttttaagaaaatattttctacacttatccttat 37198223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 23831055 - 23830959
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23831055 atccttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 23830959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 473
Target Start/End: Complemental strand, 23960694 - 23960509
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||||||  || |||| ||||||||| |||||| || ||||||||| |||||||||||||| ||||||||||||||||||||    
T  23960694 cttatccttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaa 23960596  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttg-ttgaagaaaatatgttatacacttat 473  Q
     |||||||       || |||||||||||||||||| |||| |||| ||  ||| ||||| ||||||||||||| || |||||||||    
T  23960595 tttcatctaaaaaaatgcatcgcaccaatttcattcctatcttcttgcctgttttttttgtttgaagaaaatattttctacacttat 23960509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 479
Target Start/End: Complemental strand, 37198032 - 37197831
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta--------ggtttgcaatt 374  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||| ||||||||        |||||||||||    
T  37198032 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt-ttcc-gctcattttctttattaatttattaggtttgcaatt 37197935  T
Q  375 atttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatc 474  Q
    ||||||||||||||| | |||||       || |||||||||||||||||| ||| ||||| ||||| |||| ||||||||||||| || ||||||||||    
T  37197934 atttaacctaacaaattccatctaaaaaaatgcatcgcaccaatttcattcctattctcttgccttt-tttttttgaagaaaatattttctacacttatc 37197836  T
Q  475 cttat 479  Q
    |||||    
T  37197835 cttat 37197831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 3459246 - 3459092
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    |||||||||||| ||||||||||  || |||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  3459246 tatccttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatt 3459147  T
Q  392 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||||       || |||||| ||||||||||| ||||||||| ||||| ||||    
T  3459146 tcatctaaaaaaatgcatcgcatcaatttcattcctatcctcttgcctttttttt 3459092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 13797437 - 13797534
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13797437 tatccttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaa 13797534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 23828234 - 23828141
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23828234 cttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 23828141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 29580145 - 29580007
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 395  Q
    |||||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||||| | |||||    
T  29580145 cttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcat 29580046  T
Q  396 ctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    ||       || |||||||||||||||||| |||||||||    
T  29580045 ct-aaaaattgcatcgcaccaatttcattcctatcctctt 29580007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 479
Target Start/End: Complemental strand, 39922192 - 39922013
Alignment:
Q  299 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 398  Q
    ||||||||| ||||||  || |||| ||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||     
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatcta 39922093  T
Q  399 nnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
          ||||| |||||||||| |||| |||||| || ||||| || | ||||||||||||| || | |||||||||||||    
T  39922092 aaaaaatgtattgcaccaattttattcctatcctattgccttt-ttattttgaagaaaatattttcttcacttatccttat 39922013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 27853773 - 27853638
Alignment:
Q  300 tttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnn 399  Q
    |||||||||||||||  || || | |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| | |||||      
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaa 27853674  T
Q  400 nnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
         || |||||||||||||||||| |||||||||    
T  27853673 aaaaatgcatcgcaccaatttcattcctatcctctt 27853638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 293 - 435
Target Start/End: Complemental strand, 30439155 - 30439011
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc---ctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| |||| |||||||| ||||||| ||    ||| |||||||||||||||||||||||||||||||||||||||||    
T  30439155 atccttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaa 30439056  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     |||||||       || ||||||||||||| ||||||||||||||    
T  30439055 tttcatct-aaaaaatgcatcgcaccaattttattcttatcctctt 30439011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 23085860 - 23085948
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  23085860 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaa 23085948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 37410182 - 37410078
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||| ||  || |||| ||||||||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||| ||    
T  37410182 atccttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 37410083  T
Q  393 catct 397  Q
    |||||    
T  37410082 catct 37410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 38111372 - 38111493
Alignment:
Q  325 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcatt 424  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| | |||||       || |||||||||||||||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatctgaaaaaatgcatcgcaccaatttcatt 38111471  T
Q  425 cttatcctcttacctttatttt 446  Q
    | ||||||||| ||||| ||||    
T  38111472 cctatcctcttgcctttttttt 38111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 32062811 - 32062917
Alignment:
Q  293 atccttatttattaattttgttgggtg--tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||||||||||||||||||||  ||   |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||     
T  32062811 atccttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaat 32062910  T
Q  391 ttcatct 397  Q
    |||||||    
T  32062911 ttcatct 32062917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 446
Target Start/End: Original strand, 44429047 - 44429198
Alignment:
Q  294 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 393  Q
    ||||||||||||||||||||| ||| | || ||| |||||||||| | ||||  |||||||||||||||||||  ||||| ||||||||||||||| | |    
T  44429047 tccttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattcc 44429146  T
Q  394 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
    ||||       || |||||||||||||||||||||||||||||||||| ||||    
T  44429147 atct-aaaaaatgcatcgcaccaatttcattcttatcctcttacctttttttt 44429198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 23838449 - 23838356
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacct-aatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  23838449 ttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaa 23838356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 430
Target Start/End: Complemental strand, 40399604 - 40399467
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||| |||||||||| ||  || || | |||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||| |     
T  40399604 atccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaattc 40399505  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatc 430  Q
    |||||       || |||||||||||||||||| ||||    
T  40399504 catctaaaaaaatgcatcgcaccaatttcattcctatc 40399467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 34947504 - 34947624
Alignment:
Q  325 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcatt 424  Q
    |||||||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||| |||||||       || ||||||| |||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatct-aaaaaatgcatcgcacaaatttcatt 34947602  T
Q  425 cttatcctcttacctttatttt 446  Q
    | ||||||||| ||||| ||||    
T  34947603 cctatcctcttgcctttttttt 34947624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 35617680 - 35617774
Alignment:
Q  296 cttatttattaattttgttgggtgtgcat-caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||  || ||||  ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  35617680 cttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaa 35617774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 23838246 - 23838173
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggt 366  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  23838246 atccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggt 23838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 23960910 - 23960814
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||| ||||||| ||||||||||  || |||| |||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||    
T  23960910 tatctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaacaaa 23960814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 440
Target Start/End: Complemental strand, 604795 - 604639
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||| | ||| | | ||| || ||||||||||||||||  ||| | ||||||||    
T  604795 ttctacacttatccttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacc 604697  T
Q  383 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 440  Q
    ||||||| |||||||       || |||||| ||||||||||| ||||||||| ||||    
T  604696 taacaaatttcatctaaaaaaatgcatcgcaacaatttcattcatatcctcttgcctt 604639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 37198227 - 37198131
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||| |||||| |||||||||||  || |||| |||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  37198227 cttatcgttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaa 37198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 440
Target Start/End: Original strand, 33198827 - 33198975
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||| | || | ||||||||||| |||||||||  || | |||||||||||||||     
T  33198827 ttatcattatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaat 33198926  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 440  Q
    | |||||       || |||||||||||||||||| ||||||||| ||||    
T  33198927 tccatct-aaaaaatgcatcgcaccaatttcattcctatcctcttgcctt 33198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 37197783 - 37197607
Alignment:
Q  297 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 396  Q
    ||||||||||||||||||   | |||| |||||||||||||||  ||||||||||||||||||||||  | |  ||||||||||||||||||| ||||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaatt--ttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T
Q  397 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttat 473  Q
    |       || || ||||||||||  ||| ||||||||| ||  ||| |||| ||||||||||||| || |||||||||    
T  37197685 taaaaaaatgcatggcaccaatttatttcctatcctcttgcctttttttttttttgaagaaaatattttctacacttat 37197607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 33198599 - 33198745
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||||||| |||  |||  ||||||||||||||| ||  | |||||||||| ||||||||| ||| | ||||||||||||||| ||    
T  33198599 atccttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaattt 33198696  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||||       || ||||| | ||||||||||| |||||||| |||||    
T  33198697 catctaaaacaatgcatcgcgcaaatttcattctcatcctcttgccttt 33198745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 44429210 - 44429316
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| |||||||||| || ||||| |||||||||||||||||||  ||| | |||||||    
T  44429210 ttctacatttatccttatttattaattttgttaggtctgcaacaacttaacctaatatttttcct-ctcatttgctttattaggtaagcagtaatttaac 44429308  T
Q  382 ctaacaaa 389  Q
    | ||||||    
T  44429309 ccaacaaa 44429316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 39922030 - 39921960
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatt 353  Q
    |||| |||||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||    
T  39922030 ttcttcacttatccttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 43419136 - 43419036
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||   | |||||||| |||| ||||||| |||| ||||||||||||||||||||||   | |||||||||||||||| ||    
T  43419136 atccttatttattaattttgttacatctgcatcaacttaatctaattt-ttcccgctcatttgctttattaggttt---actatttaacctaacaaattt 43419041  T
Q  393 catct 397  Q
    |||||    
T  43419040 catct 43419036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 44430053 - 44430159
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| ||||| |||| | ||||  | |||||||||||||||||  ||| | ||||||||    
T  44430053 ttctacacttatccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacc 44430152  T
Q  383 taacaaa 389  Q
     ||||||    
T  44430153 caacaaa 44430159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 44433788 - 44433894
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| ||||| |||| | ||||  | |||||||||||||||||  ||| | ||||||||    
T  44433788 ttctacacttatccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacc 44433887  T
Q  383 taacaaa 389  Q
     ||||||    
T  44433888 caacaaa 44433894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 18308319 - 18308259
Alignment:
Q  329 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||    
T  18308319 ttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaa 18308259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 44430404 - 44430557
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    |||||||||||||||||||||||||||||||| | | |||| ||| |||||||| | | ||||  |||||||||||||| ||||  ||| | ||||||||    
T  44430404 ttctacacttatccttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacc 44430503  T
Q  383 taac-aaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     ||| ||| |||||||       ||  ||||||||||||||||| |||||||||    
T  44430504 caacaaaatttcatcttgaaaaatgcttcgcaccaatttcattcctatcctctt 44430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 44433962 - 44434115
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| ||||||||||   ||||  | |||||||||||||||||  ||| | ||||||||    
T  44433962 ttctacatttatccttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacc 44434061  T
Q  383 taac-aaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     ||| ||| |||||||       ||  ||||||||||||||||| |||||||||    
T  44434062 caacaaaatttcatcttgaaaaatgcttcgcaccaatttcattcctatcctctt 44434115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 435
Target Start/End: Original strand, 2084871 - 2085015
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 391  Q
    ||||||||||||||||||||||| ||| |||| ||| |||| ||||| | ||||  |||||||||| ||||||||| | | | ||||||||||||||| |    
T  2084871 tatccttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaacaaatt 2084970  T
Q  392 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
     |||||        || |||||||||||||||||| |||||||||    
T  2084971 ccatctaagaaaaatgcatcgcaccaatttcattcctatcctctt 2085015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 283 - 479
Target Start/End: Original strand, 44430227 - 44430421
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaac 381  Q
    |||||||||||| ||||||||||||||||||| ||| |||| ||| |||||||||| || ||||| | ||||| |||||||||||  ||| | |||||||    
T  44430227 ttctacacttattcttatttattaattttgttaggtctgcaacaacttaacctaatatttttcct-cccatttactttattaggtaagcagtaatttaac 44430325  T
Q  382 ctaac-aaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 479  Q
    | ||| ||| |||||||       ||  ||||||||||||||||| ||||||||| | ||| |||| ||   || ||||| || |||||||||||||||    
T  44430326 ccaacaaaatttcatcttgaaaaatgcttcgcaccaatttcattcctatcctcttgctttttttttttt---gacaatattttctacacttatccttat 44430421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 44433623 - 44433767
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||| ||||||||| ||| |||| ||| || || |||| | ||||  | |||||||| ||||| ||| ||| | |||||||||||||||     
T  44433623 ttatccttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaacaaat 44433722  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |||||||       || |||||||||||||||||| |||||||||    
T  44433723 ttcatctaaaaaaatgcatcgcaccaatttcattcctatcctctt 44433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 37426110 - 37426208
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    ||||| ||||||||||||||||||  || |||| ||| |||  ||||||| || | |||||||| ||||||||||||||||||| |||||| |||||||    
T  37426110 ttatctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataacaaa 37426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 37197848 - 37197791
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  37197848 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt 37197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 1276574 - 1276481
Alignment:
Q  352 tttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattt 445  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||       |  || ||||||||||||||| ||||||||| |||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaacaaattgtatctaaaataattcattgcaccaatttcattcctatcctcttgcctttattt 1276481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 44434139 - 44434223
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtt 367  Q
    |||||||||||||||||||||||||||||||| | | |||| ||| |||||||||| | ||||  |||||||| | |||||||||    
T  44434139 ttctacacttatccttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttgttgtattaggtt 44434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 397
Target Start/End: Complemental strand, 604623 - 604508
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc-atttgctttattaggtttgcaattatttaac 381  Q
    |||||||||||||||| ||||||||||||||| | | || | ||| |||||||||| | ||||  ||| ||||||| ||||||||| ||| | |||||||    
T  604623 ttctacacttatccttgtttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaac 604524  T
Q  382 ctaacaaacttcatct 397  Q
     ||||||| |||||||    
T  604523 ataacaaatttcatct 604508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 42045633 - 42045737
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattagg--tttgcaattatttaacctaacaaac 390  Q
    |||||||||||| |||||||||  || |||| |||||||||||||||| ||  ||||||||| |||| ||| |  ||||||||||||||||||||||||     
T  42045633 atccttatttat-aattttgttacgtctgcagcaatttaacctaattttttt-tgctcatttactttgttaagagtttgcaattatttaacctaacaaat 42045730  T
Q  391 ttcatct 397  Q
    |||||||    
T  42045731 ttcatct 42045737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 44429888 - 44430032
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||| ||||||||| ||| |||| ||| || || |||| | ||||  | |||||| | ||||| ||| ||| | |||||||||||||||     
T  44429888 ttatccttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgttgtattatgttagcagtaatttaacctaacaaat 44429987  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 435  Q
    |||||||       || |||||||||||||||||| |||||||||    
T  44429988 ttcatctaaaaaaatgcatcgcaccaatttcattcatatcctctt 44430032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 38111190 - 38111297
Alignment:
Q  366 tttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttat 465  Q
    ||||||||| |||||||||||||| | |||||       |||||||| |||||||||||||||||||||| | |||  ||| |||||| |||||  || |    
T  38111190 tttgcaattgtttaacctaacaaaatccatctaaaaaaatgtatcgcgccaatttcattcttatcctcttgctttttattttttgaaggaaataatttct 38111289  T
Q  466 acacttat 473  Q
    ||||||||    
T  38111290 acacttat 38111297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 604448 - 604344
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc-atttgctttattaggtttgcaattatttaac 381  Q
    |||||||||||||||||||||||||||||||| | | || | ||| |||||||||| | ||||  ||| ||||| | |||||||||  || | |||||||    
T  604448 ttctacacttatccttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaac 604349  T
Q  382 ctaac 386  Q
    |||||    
T  604348 ctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 34345140 - 34345192
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 345  Q
    ||||||||||||||||||| || ||| |||| |||||||||||||||| ||||    
T  34345140 atccttatttattaattttattaggtctgcagcaatttaacctaattttttcc 34345192  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 44429383 - 44429485
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 382  Q
    ||||||||||||||||||||||||||||| || |   |||| ||| |||||||||| | ||||  ||| |||| | ||||||||| || || ||||||||    
T  44429383 ttctacacttatccttatttattaatttttttagaaatgcagcaacttaacctaatattttccctctcgtttgttgtattaggttagc-ataatttaacc 44429481  T
Q  383 taac 386  Q
    ||||    
T  44429482 taac 44429485  T

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Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 604899 - 604813
Alignment:
Q  351 atttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttac 437  Q
    ||||||| |||||||||  || | ||||||||||||||| |||||||       || ||||||| |||||||||| |||||||||||    
T  604899 atttgctgtattaggttaccagtaatttaacctaacaaatttcatctaaaaaaatgcatcgcacaaatttcattcctatcctcttac 604813  T

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Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 39922277 - 39922229
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    |||||||||||||||||||||||  || | || ||||||||||||||||    
T  39922277 tatccttatttattaattttgttacgtcttcagcaatttaacctaattt 39922229  T

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Target: scaffold0018 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 473
Target Start/End: Complemental strand, 163914 - 163731
Alignment:
Q  291 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 390  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||||| |||     
T  163914 ttatccttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaat 163815  T
Q  391 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 473  Q
    | |||||       || |||||||||||||| ||| ||||||||| || |||  ||| |||||||| |||| || |||||||||    
T  163814 tccatctgaaaaaatgcatcgcaccaatttcgttcctatcctcttgccattttgttttttgaagaagatattttctacacttat 163731  T

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Target: scaffold0294 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 12495 - 12399
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||    
T  12495 atccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaa 12399  T

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Target: scaffold0320 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 293 - 472
Target Start/End: Complemental strand, 14690 - 14512
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    ||||||||||||||||||||||   | |||||||||||||| ||||||||||  ||||||||| |||||||| |||||||||||||||||||||||| |     
T  14690 atccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaattc 14591  T
Q  393 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacactta 472  Q
     ||||       || ||| || ||||||| ||| ||||||||| ||||| |||| ||||||||||||| || ||||||||    
T  14590 tatctaaaaaaatgcatcccatcaatttc-ttcctatcctcttgcctttttttttttgaagaaaatattttctacactta 14512  T

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Target: scaffold0240 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 13088 - 13278
Alignment:
Q  293 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 392  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||||||| || | ||||||||| |||||||||||||| |||||||||||||||||| |     
T  13088 atccttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattc 13187  T
Q  393 catct--nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttat---tttgttgaagaaaatatgttatacacttatccttat 479  Q
    |||||         || |||||||||||||||||| ||||||||| ||||| |   ||| ||||||||||||| || || ||||||||||||    
T  13188 catctaaaaacaaatgcatcgcaccaatttcattcatatcctcttgcctttttccgttttttgaagaaaatattttcta-acttatccttat 13278  T

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Target: scaffold0240; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 435
Target Start/End: Original strand, 13285 - 13389
Alignment:
Q  331 aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatc 430  Q
    |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||| |||||||       || |||||||||||||||||| ||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcctatc 13384  T
Q  431 ctctt 435  Q
    |||||    
T  13385 ctctt 13389  T

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Target: scaffold0013 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 290 - 446
Target Start/End: Original strand, 102698 - 102852
Alignment:
Q  290 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 389  Q
    |||||| |||||||||||||||||| | | ||||  ||||  ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  102698 cttatctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaa 102795  T
Q  390 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 446  Q
     | |||||       || |||||| ||||||||||| ||||||||| ||||| ||||    
T  102796 ttccatctaaaaaaatgcatcgcatcaatttcattcctatcctcttgcctttttttt 102852  T

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Target: scaffold0504 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 1641 - 1551
Alignment:
Q  296 cttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaa 385  Q
    |||||||||||||||||||  || |||| |||||||| |||| ||| ||||  |||||||||||||||| |||||||||||||||||||||    
T  1641 cttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaa 1551  T

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Target: scaffold0097 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 12735 - 12816
Alignment:
Q  360 attaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 441  Q
    |||| ||||||||||||||||||||||||| |||||||       || ||||||||||||||||||||| |||||| |||||    
T  12735 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattcttaccctcttgccttt 12816  T

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Target: scaffold1155 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 1068 - 958
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 378  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  1068 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 969  T
Q  379 aacctaacaaa 389  Q
    |||||||||||    
T  968 aacctaacaaa 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 9149 - 9259
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 378  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  9149 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 9248  T
Q  379 aacctaacaaa 389  Q
    |||||||||||    
T  9249 aacctaacaaa 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 29831 - 29721
Alignment:
Q  283 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 378  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  29831 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 29732  T
Q  379 aacctaacaaa 389  Q
    |||||||||||    
T  29731 aacctaacaaa 29721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 5420 - 5372
Alignment:
Q  292 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 340  Q
    |||||||||||||||||||| || ||| |||| ||| ||||||||||||    
T  5420 tatccttatttattaattttattaggtctgcagcaacttaacctaattt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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