View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0766_low_16 (Length: 438)

Name: NF0766_low_16
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0766_low_16
NF0766_low_16
[»] chr7 (5 HSPs)
chr7 (21-433)||(8354052-8354464)
chr7 (325-373)||(8360468-8360516)
chr7 (153-211)||(33362378-33362436)
chr7 (156-208)||(42012687-42012739)
chr7 (153-213)||(32962355-32962415)
[»] chr6 (4 HSPs)
chr6 (21-116)||(7556093-7556188)
chr6 (41-95)||(32047197-32047251)
chr6 (154-262)||(7555202-7555311)
chr6 (153-230)||(32342651-32342728)
[»] chr5 (8 HSPs)
chr5 (135-213)||(41264562-41264640)
chr5 (32-116)||(41264387-41264471)
chr5 (41-91)||(2243318-2243368)
chr5 (41-107)||(7215454-7215520)
chr5 (41-107)||(22780330-22780396)
chr5 (41-97)||(7113610-7113666)
chr5 (32-77)||(37077666-37077711)
chr5 (153-213)||(14138596-14138656)
[»] chr1 (8 HSPs)
chr1 (135-213)||(68130-68208)
chr1 (41-96)||(3231981-3232036)
chr1 (21-104)||(15321044-15321127)
chr1 (42-107)||(3367806-3367871)
chr1 (48-107)||(7104295-7104354)
chr1 (41-88)||(46080994-46081041)
chr1 (41-91)||(52432684-52432734)
chr1 (147-211)||(52432706-52432770)
[»] chr8 (4 HSPs)
chr8 (41-107)||(32166621-32166687)
chr8 (153-213)||(33897620-33897680)
chr8 (48-107)||(29969127-29969186)
chr8 (135-208)||(35574609-35574682)
[»] chr3 (2 HSPs)
chr3 (41-107)||(54437660-54437726)
chr3 (160-255)||(54437864-54437959)
[»] chr2 (3 HSPs)
chr2 (41-106)||(38576924-38576989)
chr2 (41-91)||(16576271-16576321)
chr2 (118-210)||(38576904-38576996)


Alignment Details
Target: chr7 (Bit Score: 393; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 21 - 433
Target Start/End: Complemental strand, 8354464 - 8354052
Alignment:
Q  21 ttatgacaacaagttgtcagtttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgttatcataatcatta 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8354464 ttatgacaacaagttgtcagtttcatctcaagaacattaaacttctacatatccttcattcaacatgtgatattcatatctttcgttatcataatcatta 8354365  T
Q  121 ccattttaaactagagaacatctattttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatctgtaagg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8354364 ccattttaaactagagaacatctattttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatctgtaagg 8354265  T
Q  221 ataaattacctcttatttaagaaggggtaacgtagtcctcaccaattgataaatataagttgaaacttgataaaacattatttgaataccaagtactatg 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8354264 ataaattacctcttattcaagaaggggtaacgtagtcctcaccaattgataaatataagttgaaacttgataaaacattatttgaataccaagtactatg 8354165  T
Q  321 gtagatttgaaatttgtggaaatacttgcgttttaaatttaccatagatttttggtaacgcctttgataaaaagaaaaattactttctaaaacgactgaa 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8354164 gtagatttgaaatttgtggaaatacttgcgttttaaatttaccatagatttttggtaacgcctttgataaaaagaaaaattactttctgaaacgactgaa 8354065  T
Q  421 tgttcatctcact 433  Q
    |||| || |||||    
T  8354064 tgttgatatcact 8354052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 8360516 - 8360468
Alignment:
Q  325 atttgaaatttgtggaaatacttgcgttttaaatttaccatagattttt 373  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  8360516 atttgaaatttgtggaaatacctatgttttaaatttaccatagattttt 8360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 33362436 - 33362378
Alignment:
Q  153 atctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatattta 211  Q
    ||||| |||||| |||||||||||| ||  | |||||||||||||||||||||||||||    
T  33362436 atctccttcattcaacatgtgatttacaactcttttgttctaaaatcgaatcatattta 33362378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 42012687 - 42012739
Alignment:
Q  156 tctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatat 208  Q
    |||||||||||| ||||||||| ||| ||||| |||| |||||||||||||||    
T  42012687 tctttcatttaagatgtgatttacatctttttcgttccaaaatcgaatcatat 42012739  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 32962415 - 32962355
Alignment:
Q  153 atctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatc 213  Q
    ||||| || ||| ||||| |||| | |||||||||||||  ||||||||||||||||||||    
T  32962415 atctcctttattcaacatatgatctacatattttttgtttcaaaatcgaatcatatttatc 32962355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 8e-28; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 7556188 - 7556093
Alignment:
Q  21 ttatgacaacaagttgtcagtttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgttatcataatc 116  Q
    |||||||| | |||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7556188 ttatgacagcgagttgtcattttcatctcaagaacattaaatttattcatatcattcattcaacatgtgatcttcctatctttcgttatcataatc 7556093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 32047197 - 32047251
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattc 95  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||    
T  32047197 tttcatctcaagaacatcaaacttcttcatctcattcattcaacatatgatattc 32047251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 7555311 - 7555202
Alignment:
Q  154 tctctttcatttaacatgtgatttccatatt-ttttgttctaaaatcgaatcatatttatctgtaaggataaattacctcttatttaagaaggggtaacg 252  Q
    |||||||||||||| |||| | || ||| || |||| || | |||| ||||||||||| ||  ||  ||||||||||| |||||| |||||||||||||     
T  7555311 tctctttcatttaatatgtaaattgcattttattttatttttaaattgaatcatatttgtcattacagataaattaccccttattcaagaaggggtaaca 7555212  T
Q  253 tagtcctcac 262  Q
    |||| |||||    
T  7555211 tagttctcac 7555202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 32342651 - 32342728
Alignment:
Q  153 atctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatctgtaaggataaattacc 230  Q
    ||||| |||||| |||||| ||| || || ||||| |||| | |||| |||||||||||||  |||||||||||||||    
T  32342651 atctcattcattcaacatgcgatctctatttttttcgttccagaatcaaatcatatttatcattaaggataaattacc 32342728  T

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Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 41264562 - 41264640
Alignment:
Q  135 agaacatctattttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatc 213  Q
    |||||||| | |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  41264562 agaacatcaaatttcttcatctctttcatttaacttgagatttccatattttttgttctaaaatcgaatcatatttatc 41264640  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 41264387 - 41264471
Alignment:
Q  32 agttgtcagtttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgttatcataatc 116  Q
    |||||||| |||||||||||||||||||||||| | |||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  41264387 agttgtcattttcatctcaagaacattaaactttttcatattgttcattcaacatgtgatcttcatctctttcgttatcataatc 41264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 2243368 - 2243318
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgat 91  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  2243368 tttcatctcaagaacatcaaacttcttcatatccttcattcaacatgtgat 2243318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 7215520 - 7215454
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    |||||| ||||||||||||||||| | |||||  ||||||||||||||||| ||||| |||||||||    
T  7215520 tttcatatcaagaacattaaactttttcatattcttcattcaacatgtgatcttcatctctttcgtt 7215454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 22780396 - 22780330
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    ||||||||||| |||| ||||||||| |||||| ||||||||||||||||| |||||  ||||||||    
T  22780396 tttcatctcaaaaacaataaacttcttcatatccttcattcaacatgtgatcttcatccctttcgtt 22780330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 7113666 - 7113610
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcat 97  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||| |||||| |||||    
T  7113666 tttcatctcaagaatattaaacttcttcatctcattcattcaacgtgtgattttcat 7113610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 37077666 - 37077711
Alignment:
Q  32 agttgtcagtttcatctcaagaacattaaacttctacatatcattc 77  Q
    |||| ||| |||||||||||||||||||||||||| ||| ||||||    
T  37077666 agttatcattttcatctcaagaacattaaacttcttcatctcattc 37077711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 14138596 - 14138656
Alignment:
Q  153 atctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatc 213  Q
    |||||||||||| ||||||| || | ||| |||||||||  |||||||||| |||||||||    
T  14138596 atctctttcattcaacatgtaatcttcatcttttttgtttgaaaatcgaattatatttatc 14138656  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 68130 - 68208
Alignment:
Q  135 agaacatctattttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatc 213  Q
    ||||||||||  ||||| ||||| ||||||||||||||||| ||||| ||||| |||| |||||||||| |||||||||    
T  68130 agaacatctaacttcttcatctccttcatttaacatgtgatctccatctttttcgttccaaaatcgaatgatatttatc 68208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 3231981 - 3232036
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattca 96  Q
    ||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||    
T  3231981 tttcatctcaagaacaacaaacttcttcatgtcattcattcaacatgtgatattca 3232036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 15321044 - 15321127
Alignment:
Q  21 ttatgacaacaagttgtcagtttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttc 104  Q
    |||| ||||| |||||||| |||| |||||| ||||||||| || | |||||| |||||||||||||| || ||||| ||||||    
T  15321044 ttattacaacgagttgtcattttcttctcaaaaacattaaattttttcatatccttcattcaacatgtaatcttcatctctttc 15321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 3367806 - 3367871
Alignment:
Q  42 ttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    |||||||||||||||| ||| || | ||| |||||||||||||||||||| | ||| |||||||||    
T  3367806 ttcatctcaagaacatcaaattttttcatctcattcattcaacatgtgatctccatctctttcgtt 3367871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 7104295 - 7104354
Alignment:
Q  48 tcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    ||||||| |||||| |||| ||| || |||||||||||||| |||||||| |||||||||    
T  7104295 tcaagaatattaaatttcttcatctccttcattcaacatgtaatattcatctctttcgtt 7104354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 46080994 - 46081041
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgt 88  Q
    |||||||||||||||||||||||||| ||| || |||| |||||||||    
T  46080994 tttcatctcaagaacattaaacttcttcatctccttcactcaacatgt 46081041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 52432684 - 52432734
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgat 91  Q
    |||||||||||||||||||||||||| ||| || |||||| |||| |||||    
T  52432684 tttcatctcaagaacattaaacttcttcatctccttcatttaacaagtgat 52432734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 52432706 - 52432770
Alignment:
Q  147 ttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatattta 211  Q
    ||||| ||||| ||||||||||| ||||| ||||| |  ||||||||| |||||||| |||||||    
T  52432706 ttcttcatctccttcatttaacaagtgatctccatctaatttgttctataatcgaattatattta 52432770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 32166687 - 32166621
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    ||||||||||||||||| |||||||| ||| || || ||||||||||| || ||||| |||||||||    
T  32166687 tttcatctcaagaacatcaaacttcttcatctcctttattcaacatgtaatcttcatctctttcgtt 32166621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 33897620 - 33897680
Alignment:
Q  153 atctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatc 213  Q
    ||||| ||||||||||||||||||| ||| ||||| ||||||||||| |||| | ||||||    
T  33897620 atctccttcatttaacatgtgatttacatctttttcgttctaaaatctaatcgtgtttatc 33897680  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 29969127 - 29969186
Alignment:
Q  48 tcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    |||||||||| |||||||| | |  | ||||||||||||||||||||||| |||||||||    
T  29969127 tcaagaacatcaaacttcttcttccccttcattcaacatgtgatattcatctctttcgtt 29969186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 35574682 - 35574609
Alignment:
Q  135 agaacatctattttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatat 208  Q
    |||||||| | ||| || ||||| |||||| ||||||| || ||||| ||||| |||| |||||||||||||||    
T  35574682 agaacatcaaattttttcatctcattcattcaacatgtcatctccatctttttcgttccaaaatcgaatcatat 35574609  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 54437660 - 54437726
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgtt 107  Q
    ||||||||||| |||||||||||||| |||||| |||||| ||||||| |  ||||| |||||||||    
T  54437660 tttcatctcaataacattaaacttcttcatatccttcatttaacatgtaaacttcatctctttcgtt 54437726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 54437864 - 54437959
Alignment:
Q  160 tcatttaacatgtgatttccatattttttgttctaaaatcgaatcatatttatctgtaaggataaattacctcttatttaagaaggggtaacgtag 255  Q
    |||||||||| ||| ||||||| |||||  || ||||||| |||||||||||||  ||  | ||||||||| || ||| || ||||||||||||||    
T  54437864 tcatttaacacgtggtttccatctttttcattttaaaatcaaatcatatttatcattagaggtaaattacccctaattcaacaaggggtaacgtag 54437959  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 38576989 - 38576924
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgatattcatatctttcgt 106  Q
    |||||||| |||||||||||| |||| ||| || ||||||||||||||||| | ||| ||||||||    
T  38576989 tttcatctaaagaacattaaagttcttcatctctttcattcaacatgtgatttccatctctttcgt 38576924  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 16576271 - 16576321
Alignment:
Q  41 tttcatctcaagaacattaaacttctacatatcattcattcaacatgtgat 91  Q
    |||| |||||||||||| |||||||| ||| || |||||||||||||||||    
T  16576271 tttcctctcaagaacatcaaacttcttcatctccttcattcaacatgtgat 16576321  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 38576996 - 38576904
Alignment:
Q  118 ttaccattttaaactagagaacatctattttcttgatctctttcatttaacatgtgatttccatattttttgttctaaaatcgaatcatattt 210  Q
    |||||||||| | ||| |||||||  |  ||||| |||||||||||| |||||||||||||||| | ||| || | | |||| ||||||||||    
T  38576996 ttaccattttcatctaaagaacattaaagttcttcatctctttcattcaacatgtgatttccatctctttcgtaccataatcaaatcatattt 38576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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