View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0766_low_18 (Length: 416)
Name: NF0766_low_18
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0766_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 97 - 412
Target Start/End: Original strand, 36986899 - 36987214
Alignment:
| Q |
97 |
cagaaggaagcttcttatatatatctgaatctcataaaatgttttgcaggtaattatttctattaacctgaaacaccttgcttatataatataaatgtca |
196 |
Q |
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| T |
36986899 |
cagaaggaagcttcttatatatatctgaatctcataaaatgttttgcaggtaattatttctactaacctgaaacaccttgcttatataatataaatgtca |
36986998 |
T |
|
| Q |
197 |
tctttctatgaagaaaataatcgattgaagctggaagctcaagaatttgcttgtatatttgatgaaaaatctactgttcaggaattgcctccaaaggtaa |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
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| T |
36986999 |
tctttctatgaagaaaataatcgattgaagctggaagctcaagaatttgcttgtatatttgatgaaaaatctactattcaggatttgcctccaaaggtaa |
36987098 |
T |
|
| Q |
297 |
atatgcttttgtttttccttatcctaaagagagatgtctgaatggaagtcaatatttttcatttgactaatttgttgcgtagcttgttgatcatttgact |
396 |
Q |
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|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36987099 |
atttgctcttgtttttccttatcctaaagagagatgtctgaatggaagtcaatatttttcatttgactaattggttgcgtagcttgttgatcatttgact |
36987198 |
T |
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| Q |
397 |
atttttcatatcagtc |
412 |
Q |
| |
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||||||||||| |||| |
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| T |
36987199 |
atttttcatatgagtc |
36987214 |
T |
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