View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0766_low_26 (Length: 384)
Name: NF0766_low_26
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0766_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 94 - 382
Target Start/End: Complemental strand, 10292918 - 10292627
Alignment:
| Q |
94 |
ataacatgtatgaaagtcatctagactaaaaagtcgttagatgtccaaattaacctaacttatgcaagctaggaactaataatcttgtttaggtgtgtgg |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10292918 |
ataacatgtatgaaagtcatctagactaaaaagtcgttagatgtccaaattaacctaacttatgcaagctaggaactaataatcttgtttaggtgtgtgg |
10292819 |
T |
|
| Q |
194 |
aaagaaattcctttactaaaaagtggtagtttgccaatgagtatcgtggtagcttggaagtggagggctttcaccacacatacttaattagggtcaaaat |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
10292818 |
aaagaaattcctttactaaaaagtggtagtttgccaatgagtatcgtggtagcttggaagtggagggctttcaccacacatacttaattagagtcaaaat |
10292719 |
T |
|
| Q |
294 |
gtgatgaatgcttgtggtttagtgcataa---taatgatagaaagtttctgagaccactatctttgaattgtgactataagcaagtgcaagg |
382 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10292718 |
gtgatgaatgcttgtggtttagtgcataataataatgatagaaagtttctgagaccactatctttgaattgtgactataagcaagtgcaagg |
10292627 |
T |
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