View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0766_low_41 (Length: 287)
Name: NF0766_low_41
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0766_low_41 |
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Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 31839678 - 31839545
Alignment:
| Q |
5 |
attttgctttctttcttttcaattttcaaagtttaaagaatgataatatttatataaataagttctaataaaccaaatgaaaaatattagattttacttg |
104 |
Q |
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| T |
31839678 |
attttgctttctttcttttcaattttcaaagtttaaagaatgataatatttatataaataagttctaataaaccaaatgaaaaatattagattttacttg |
31839579 |
T |
|
| Q |
105 |
ttttttcaaaaagcagaaaataatgtcattttat |
138 |
Q |
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||||| ||||||||||||||||||| ||||||| |
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| T |
31839578 |
cttttttaaaaagcagaaaataatgttattttat |
31839545 |
T |
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