View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0766_low_5 (Length: 622)

Name: NF0766_low_5
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0766_low_5
NF0766_low_5
[»] scaffold0140 (2 HSPs)
scaffold0140 (217-505)||(35481-35774)
scaffold0140 (567-607)||(35836-35877)
[»] chr1 (14 HSPs)
chr1 (218-435)||(52947347-52947565)
chr1 (212-493)||(46652563-46652846)
chr1 (224-493)||(46651367-46651638)
chr1 (213-283)||(36145339-36145409)
chr1 (217-283)||(16673250-16673316)
chr1 (217-283)||(33257880-33257946)
chr1 (217-283)||(33278052-33278118)
chr1 (214-248)||(45915503-45915537)
chr1 (218-283)||(7653686-7653751)
chr1 (214-283)||(7655258-7655327)
chr1 (215-248)||(28649680-28649713)
chr1 (216-248)||(4062560-4062592)
chr1 (220-248)||(10771355-10771383)
chr1 (449-493)||(46604670-46604714)
[»] chr5 (10 HSPs)
chr5 (218-493)||(42775420-42775697)
chr5 (217-305)||(42776789-42776878)
chr5 (216-248)||(30381603-30381635)
chr5 (217-248)||(35988854-35988885)
chr5 (217-283)||(16308564-16308630)
chr5 (214-248)||(31024354-31024388)
chr5 (218-283)||(1418930-1418995)
chr5 (215-248)||(4285157-4285190)
chr5 (218-283)||(30332283-30332348)
chr5 (216-248)||(15795752-15795784)
[»] chr7 (18 HSPs)
chr7 (214-292)||(28848554-28848632)
chr7 (215-493)||(43546512-43546792)
chr7 (217-305)||(25008091-25008180)
chr7 (216-292)||(43545340-43545417)
chr7 (217-305)||(25009456-25009545)
chr7 (217-305)||(28849939-28850028)
chr7 (217-283)||(31392057-31392123)
chr7 (217-283)||(31393653-31393719)
chr7 (214-283)||(21715068-21715137)
chr7 (208-248)||(3843259-3843299)
chr7 (217-248)||(23966314-23966345)
chr7 (217-248)||(26776309-26776340)
chr7 (209-283)||(45277961-45278036)
chr7 (218-248)||(4706634-4706664)
chr7 (218-248)||(4707497-4707527)
chr7 (214-248)||(21914667-21914701)
chr7 (216-248)||(20016778-20016810)
chr7 (215-283)||(21716613-21716681)
[»] scaffold0018 (1 HSPs)
scaffold0018 (218-493)||(193591-193868)
[»] chr4 (20 HSPs)
chr4 (217-381)||(39929249-39929414)
chr4 (216-292)||(39927931-39928008)
chr4 (216-283)||(55947358-55947425)
chr4 (217-283)||(42889804-42889870)
chr4 (217-283)||(44251604-44251670)
chr4 (214-248)||(52477641-52477675)
chr4 (215-283)||(10337101-10337169)
chr4 (217-248)||(15807655-15807686)
chr4 (216-283)||(19994496-19994563)
chr4 (215-245)||(47848238-47848268)
chr4 (218-248)||(47864489-47864519)
chr4 (217-283)||(48713456-48713522)
chr4 (361-493)||(5236379-5236512)
chr4 (567-616)||(13508121-13508170)
chr4 (215-307)||(13508429-13508526)
chr4 (214-283)||(19996048-19996117)
chr4 (219-283)||(33609338-33609402)
chr4 (216-248)||(47848856-47848888)
chr4 (220-248)||(52502407-52502435)
chr4 (215-283)||(55948947-55949015)
[»] chr3 (11 HSPs)
chr3 (217-381)||(45981406-45981571)
chr3 (217-292)||(8391400-8391476)
chr3 (224-305)||(8392774-8392856)
chr3 (214-305)||(45982770-45982862)
chr3 (212-248)||(3990874-3990910)
chr3 (209-248)||(25165890-25165929)
chr3 (217-248)||(25166775-25166806)
chr3 (218-248)||(20289619-20289649)
chr3 (217-283)||(53529528-53529594)
chr3 (212-248)||(26052205-26052241)
chr3 (217-249)||(52935685-52935717)
[»] chr2 (17 HSPs)
chr2 (213-381)||(20587034-20587203)
chr2 (218-493)||(20588241-20588518)
chr2 (217-283)||(28563375-28563441)
chr2 (216-248)||(28917134-28917166)
chr2 (210-248)||(2237973-2238012)
chr2 (217-248)||(2238851-2238882)
chr2 (217-248)||(21716439-21716470)
chr2 (217-248)||(21720227-21720258)
chr2 (209-248)||(24559581-24559620)
chr2 (205-248)||(29090877-29090920)
chr2 (206-248)||(3149907-3149949)
chr2 (205-283)||(6844091-6844169)
chr2 (218-248)||(28916285-28916315)
chr2 (214-283)||(45493026-45493095)
chr2 (214-283)||(45500768-45500837)
chr2 (445-493)||(28563604-28563652)
chr2 (214-286)||(34591721-34591793)
[»] scaffold0524 (2 HSPs)
scaffold0524 (216-493)||(8851-9130)
scaffold0524 (221-283)||(7701-7763)
[»] scaffold0472 (2 HSPs)
scaffold0472 (207-385)||(10337-10516)
scaffold0472 (217-305)||(9019-9108)
[»] scaffold0369 (1 HSPs)
scaffold0369 (217-305)||(8241-8330)
[»] chr8 (11 HSPs)
chr8 (224-493)||(35505528-35505799)
chr8 (216-283)||(25264338-25264405)
chr8 (215-380)||(35506824-35506990)
chr8 (209-248)||(1939441-1939480)
chr8 (216-283)||(3158031-3158098)
chr8 (217-248)||(23154338-23154369)
chr8 (218-248)||(11761038-11761068)
chr8 (218-248)||(23153548-23153578)
chr8 (218-248)||(26635510-26635540)
chr8 (216-248)||(9122721-9122753)
chr8 (220-248)||(37586724-37586752)
[»] chr6 (13 HSPs)
chr6 (208-248)||(24051245-24051285)
chr6 (217-288)||(7678636-7678707)
chr6 (219-283)||(2956229-2956293)
chr6 (208-248)||(9699185-9699225)
chr6 (209-356)||(31994675-31994823)
chr6 (217-248)||(6159753-6159784)
chr6 (217-248)||(28302193-28302224)
chr6 (217-248)||(28509849-28509880)
chr6 (217-283)||(1258434-1258500)
chr6 (218-248)||(29979254-29979284)
chr6 (219-248)||(24052024-24052053)
chr6 (219-283)||(19084114-19084178)
chr6 (216-248)||(22352959-22352991)
[»] scaffold0141 (1 HSPs)
scaffold0141 (214-248)||(10302-10336)
[»] scaffold0765 (1 HSPs)
scaffold0765 (218-248)||(386-416)
[»] scaffold0518 (1 HSPs)
scaffold0518 (208-248)||(1070-1110)


Alignment Details
Target: scaffold0140 (Bit Score: 184; Significance: 3e-99; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 217 - 505
Target Start/End: Original strand, 35481 - 35774
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc---ttttttgtttcaaaactctccttgtaag-ctttttt 312  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    |||||||||||||||||||||||||||| |||||||    
T  35481 aggcttaaatatgcaaaccgtccctgtaatttcgcgcatttttgcaattcgtccctgtattcttttttttgtttcaaaactctccttgtaagtctttttt 35580  T
Q  313 cgttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgtt 412  Q
    |||||||||||||||| ||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||| |||    
T  35581 cgttttgcaaatggtcattcccgttaactcccgttacaaaaacggcgaggtggcagacggagacacacgtggcttacggtgacttggcaaaaggagggtt 35680  T
Q  413 acgtgtcaaaagagttggggagtggctagattcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaatt-aaaaagtcttaaatatc 505  Q
    |||||||||||||| |||| |||||||||||| |||||| | || ||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  35681 acgtgtcaaaagagctgggtagtggctagattgagggactacaaagaaaaacgaaaaagtgcaaagggatgaaattaaaaaagtcataaatatc 35774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 567 - 607
Target Start/End: Original strand, 35836 - 35877
Alignment:
Q  567 atctctcacccactaccttcttcatctttc-tgccaaatttt 607  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  35836 atctctcacccactaccttcttcatctttcttgccaaatttt 35877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 218 - 435
Target Start/End: Original strand, 52947347 - 52947565
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttt-ttgtttcaaaactctccttgtaagcttttttcgtt 316  Q
    ||||||||||||||||||||| |||||||||  || ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  52947347 ggcttaaatatgcaaaccgtctctgtaattttgcgcatttttgcaattcgtccatgtatctttttttgtttcaaaactctccttgtaagcttttttcgtt 52947446  T
Q  317 ttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacgt 416  Q
    ||||||||| | |||||| ||||||||| ||||||||| ||| ||||||||| |||||||| |||||||||| |||||| || ||||||||| |||||||    
T  52947447 ttgcaaatgattcttcccgttaactcccgttacaaaaacggcgaggtggcaggcggagacatacgtggcttagtgtgacttgacaaaaggagggttacgt 52947546  T
Q  417 gtcaaaagagttggggagt 435  Q
    |||||||||||||| ||||    
T  52947547 gtcaaaagagttggtgagt 52947565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 212 - 493
Target Start/End: Complemental strand, 46652846 - 46652563
Alignment:
Q  212 tatttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaagctttt 310  Q
    |||||||||||||||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||   |||||||||| |  |    
T  46652846 tatttaggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttact 46652747  T
Q  311 ttcgttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtg 410  Q
      |  ||||||| | |||| |||| ||||||||| ||||||||| |    ||||||||||||||||||||| |||  | |||||  |||||||||         
T  46652746 agccgtttgcaattcgtccctcccgttaactcccgttacaaaaacgttatggtggcagacggagacacacgcggcgaagtgtgagttggcaaaagcttgc 46652647  T
Q  411 ttacgtgtcaaaagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    ||| ||||||| |||| ||  |||||| ||| |   |||||||||||| ||||||| || | |||| |||||||||||||||||    
T  46652646 ttatgtgtcaagagagatgatgagtggttagaaaggagggaccaaaaccaaaaacgcaaaattgcagagggatgaaattaaaaa 46652563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 493
Target Start/End: Original strand, 46651367 - 46651638
Alignment:
Q  224 aatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagct-tttttcgttttgca 321  Q
    |||||||||| ||||||||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||   |||||||||| |     ||| ||||||    
T  46651367 aatatgcaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttgccaatcg-tttgca 46651465  T
Q  322 aatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacgtgtcaa 421  Q
    | |  ||| |||| ||||||||| ||||||||| |    ||||||||||||||||||||||||   | |||||  |||||||||     ||| |||||||    
T  46651466 attcatccctcccgttaactcccgttacaaaaacgttgtggtggcagacggagacacacgtggtgaagtgtgagttggcaaaagcttgcttatgtgtcaa 46651565  T
Q  422 aagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
     |||| ||  |||||||||| |   |||||||||||| |||| || || | |||| |||||||||||||||||    
T  46651566 gagagatgatgagtggctagaaaggagggaccaaaaccaaaagcgcaaaattgcagagggatgaaattaaaaa 46651638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 36145339 - 36145409
Alignment:
Q  213 atttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||||||    ||||||| ||||||||||||    
T  36145339 atttaggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatctttttt 36145409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 16673316 - 16673250
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  16673316 aggcttaaatatgtaaatcgtccctgtaattttgcgtgtttttggttttcgtccctgtatctttttt 16673250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 33257880 - 33257946
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   || |||||||||||||||||    
T  33257880 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgtatctttttt 33257946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 33278052 - 33278118
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   || |||||||||||||||||    
T  33278052 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgtatctttttt 33278118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 45915503 - 45915537
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||| |||||||||||||||    
T  45915503 tttaggcttaaatatgcaatccgtccctgtaattt 45915537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 7653686 - 7653751
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||| ||| ||||||||||||||  |||||||||    ||||||| ||||||||||||    
T  7653686 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatctttttt 7653751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 7655327 - 7655258
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||||| ||| ||| ||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  7655327 tttaggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgtatctttttt 7655258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 28649680 - 28649713
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||| |||||||||||||||    
T  28649680 ttaggcttaaatatgcaatccgtccctgtaattt 28649713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 4062592 - 4062560
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||| |||||||||||||||    
T  4062592 taggcttaaatatgcaatccgtccctgtaattt 4062560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 10771355 - 10771383
Alignment:
Q  220 cttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||    
T  10771355 cttaaatatgcaaaccgtccctgtaattt 10771383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 493
Target Start/End: Original strand, 46604670 - 46604714
Alignment:
Q  449 gaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    ||||||||| ||||||| || ||||||||||||||||||| ||||    
T  46604670 gaccaaaaccaaaaacgtaaaagtgcaaagggatgaaattgaaaa 46604714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 218 - 493
Target Start/End: Original strand, 42775420 - 42775697
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagcttttttcgtt 316  Q
    |||||||||||| ||| ||| ||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||   |||||||||| |  |  |  |    
T  42775420 ggcttaaatatgtaaaacgttcctgtaatttcgcgtgtttttgcaaatcgtccttgtatctttttttgtttcaaaatcatccttgtaagttactagccgt 42775519  T
Q  317 ttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacgt 416  Q
    |||||| | |||| |||| ||||||||| ||||||||| |    ||||||||||||||||||||| |||  | |||||  |||||||||     ||| ||    
T  42775520 ttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggtggcagacggagacacacgcggcgaagtgtgagttggcaaaagcttgcttatgt 42775619  T
Q  417 gtcaaaagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    ||||| |||| ||  |||||| ||| |   |||||||||||| ||||||| || | |||| |||||||||||||||||    
T  42775620 gtcaagagagatgatgagtggttagaaaggagggaccaaaaccaaaaacgcaaaattgcagagggatgaaattaaaaa 42775697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 42776878 - 42776789
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaag 305  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||   ||||||||||    
T  42776878 aggctttaatatgcaaaccgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaag 42776789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 30381635 - 30381603
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||||    
T  30381635 taggcttaaatatgcaaaccgtccctgtaattt 30381603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 35988854 - 35988885
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  35988854 aggcttaaatatgcaaaccgtccctgtaattt 35988885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 16308564 - 16308630
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||| ||| ||| ||||||   ||||||| ||||||||||||    
T  16308564 aggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttt 16308630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 31024388 - 31024354
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||| ||||||||||||||||||||||||||||    
T  31024388 tttaggattaaatatgcaaaccgtccctgtaattt 31024354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 1418995 - 1418930
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||| ||| |||||||||||||| |||| |||||    ||||||| ||||||||||||    
T  1418995 ggcttaaatatgtaaatcgtccctgtaatttgacgtgttttttgttttcgtccctgtatctttttt 1418930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 4285157 - 4285190
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||| |||||||||||||    
T  4285157 ttaggcttaaatatgcaaactgtccctgtaattt 4285190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 30332283 - 30332348
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||| ||| ||||||||||||||  |||||||||    ||||||| ||||||||||||    
T  30332283 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatctttttt 30332348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 15795784 - 15795752
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||| |||||||||||||    
T  15795784 taggcttaaatatgcaaactgtccctgtaattt 15795752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 28848554 - 28848632
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatcttttttgtttcaaaa 292  Q
    |||||||||||||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||||    
T  28848554 tttaggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatcttttttgtttcaaaa 28848632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 493
Target Start/End: Complemental strand, 43546792 - 43546512
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgta-tcttttttgtttcaaaactctccttgtaagcttttttc 313  Q
    ||||||||||||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||| | |||||||||| ||||   |||||||||| |  |  |    
T  43546792 ttaggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatttttttttgttttaaaatcatccttgtaagttactagc 43546693  T
Q  314 gttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgtta 413  Q
      ||||||| | |||| |||| ||||||||| |||||||||      ||||||||||||||||||||| |||  | |||||  |||||||||     |||    
T  43546692 cgtttgcaattcgtccctcccgttaactcccgttacaaaaacattgtggtggcagacggagacacacgcggcgaagtgtgagttggcaaaagtttgctta 43546593  T
Q  414 cgtgtcaaaagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
     ||||||| |||| ||  |||||| ||| |   |||||||||||| ||||||| || | |||| |||||||||||||||||    
T  43546592 tgtgtcaagagagatgatgagtggttagaaaggagggaccaaaaccaaaaacgcaaaattgcagagggatgaaattaaaaa 43546512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 25008091 - 25008180
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaag 305  Q
    ||||||||||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||   ||||||||||    
T  25008091 aggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaag 25008180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 43545340 - 43545417
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaa 292  Q
    ||||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||    
T  43545340 taggctttaatatgcaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaa 43545417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 25009545 - 25009456
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaag 305  Q
    |||||| |||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||   ||||||||||    
T  25009545 aggctttaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaag 25009456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 28850028 - 28849939
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaag 305  Q
    |||||| |||||||||| ||||||||||| ||| ||| ||||||||| |||||| |||||||| |||||||||||||   ||||||||||    
T  28850028 aggctttaatatgcaaaacgtccctgtaacttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaag 28849939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 31392057 - 31392123
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| |||||||||||||| |||| ||||||   ||||||| ||||||||||||    
T  31392057 aggcttaaatatgtaaatcgtccctgtaatttgacgtgtttttggttttcgtccctgtatctttttt 31392123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 31393719 - 31393653
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||||||||||||||||    
T  31393719 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttt 31393653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 21715068 - 21715137
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  21715068 tttaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgattttcgtccctgtatctttttt 21715137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 3843299 - 3843259
Alignment:
Q  208 attttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  3843299 attttattttggcttaaatatgcaaaccgtctctgtaattt 3843259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 23966314 - 23966345
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  23966314 aggcttaaatatgcaaaccgtccctgtaattt 23966345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 26776309 - 26776340
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  26776309 aggcttaaatatgcaaaccgtccctgtaattt 26776340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 45278036 - 45277961
Alignment:
Q  209 ttttattta-ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||| |||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  45278036 ttttatttatggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttt 45277961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 4706634 - 4706664
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  4706634 ggcttaaatatgcaaaccgtccctgtaattt 4706664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 4707527 - 4707497
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  4707527 ggcttaaatatgcaaaccgtccctgtaattt 4707497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 21914701 - 21914667
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||| ||||||||||||||||||||||||    
T  21914701 tttaggcttacatatgcaaaccgtccctgtaattt 21914667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 20016810 - 20016778
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||| |||||||||||||    
T  20016810 taggcttaaatatgcaaactgtccctgtaattt 20016778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 21716681 - 21716613
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||||| ||| ||| ||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  21716681 ttaggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgtatctttttt 21716613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 218 - 493
Target Start/End: Original strand, 193591 - 193868
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagcttttttcgtt 316  Q
    |||||||||||| ||| |||| |||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||   |||||||||| |  |  |  |    
T  193591 ggcttaaatatgtaaaacgtctctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttaatagccgt 193690  T
Q  317 ttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacgt 416  Q
    |||||| | |||| |||| ||||||||| ||||||||| |    ||||||||||||||||||||| |||  | |||||  |||||||||     ||| ||    
T  193691 ttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggtggcagacggagacacacgcggcgaagtgtgagttggcaaaagcttgcttatgt 193790  T
Q  417 gtcaaaagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    ||||| || | ||  |||||| ||| |   |||||||||||| ||||||| || | |||| |||||||||||||||||    
T  193791 gtcaagagcgatgatgagtggttagaaaggagggaccaaaaccaaaaacgcaaaattgcagagggatgaaattaaaaa 193868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 39929414 - 39929249
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaagcttttttcgt 315  Q
    ||||||||||||| ||| ||||| ||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||   |||||||||| |  |  |      
T  39929414 aggcttaaatatgtaaaacgtccatgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttactagccg 39929315  T
Q  316 tttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacg 381  Q
    ||||||| | |||| |||| ||||||||| ||||||||| |    |||||||||||||||||||||    
T  39929314 tttgcaattcgtccctcccgttaactcccgttacaaaaacgttatggtggcagacggagacacacg 39929249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 39927931 - 39928008
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaa 292  Q
    ||||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||    
T  39927931 taggctttaatatgcaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaa 39928008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 55947358 - 55947425
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||   ||||||| ||||||||||||    
T  55947358 taggcttaaatatgtaaatcgtccctgtaatttgacgtatttttggttttcgtccctgtatctttttt 55947425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 42889870 - 42889804
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||| ||||||| |||||    ||||||||||||||||||||    
T  42889870 aggcttaaatatgtaaatcgtccctgtaagttcacgtgttttttgttttcgtccttgtatctttttt 42889804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 44251604 - 44251670
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||||||||||||||||    
T  44251604 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttt 44251670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 52477641 - 52477675
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||||||    
T  52477641 tttaggcttaaatatgcaaaccgtccctgtaattt 52477675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 10337101 - 10337169
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||| |||||||||| ||| ||||||||||||||  ||| ||||||   ||||||||||||||||||||    
T  10337101 ttagacttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttt 10337169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 15807655 - 15807686
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  15807655 aggcttaaatatgcaaaccgtccctgtaattt 15807686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 19994496 - 19994563
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  19994496 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttt 19994563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 245
Target Start/End: Original strand, 47848238 - 47848268
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaa 245  Q
    |||||||||||||||||||||||||||||||    
T  47848238 ttaggcttaaatatgcaaaccgtccctgtaa 47848268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 47864489 - 47864519
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  47864489 ggcttaaatatgcaaaccgtccctgtaattt 47864519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 48713522 - 48713456
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  48713522 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttt 48713456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 493
Target Start/End: Original strand, 5236379 - 5236512
Alignment:
Q  361 ggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacgtgtcaaaagagttggggagtggctagattc-agggaccaaaacga 459  Q
    ||||| ||| |||||||||||||||  |  ||||  ||||||||| ||  ||| ||||||| |||| ||  |||||||||||    ||||||||| || |    
T  5236379 ggtggtagatggagacacacgtggcgaatggtgagttggcaaaagcagaattatgtgtcaagagagatgatgagtggctagaaaggagggaccaagacca 5236478  T
Q  460 aaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    |||||| || | ||||||||||||||||||||||    
T  5236479 aaaacgcaaaattgcaaagggatgaaattaaaaa 5236512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 616
Target Start/End: Complemental strand, 13508170 - 13508121
Alignment:
Q  567 atctctcacccactaccttcttcatctttctgccaaatttttcatctcac 616  Q
    |||||||||||| | ||||||||||||||||| ||| || ||||||||||    
T  13508170 atctctcacccaattccttcttcatctttctgtcaatttcttcatctcac 13508121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 13508526 - 13508429
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-----ttttgtttcaaaactctccttgtaagct 307  Q
    |||||||||||||||||||  ||| || ||||||  ||| ||||||||| |||||  ||||||||     |||| |||||||||| ||||||||||||    
T  13508526 ttaggcttaaatatgcaaaatgtctctataattttgcgtgtttttgcaaatcgtctgtgtatctttttttttttttttcaaaactgtccttgtaagct 13508429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 19996117 - 19996048
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||||| ||| ||||||||||||||  ||| ||||||   || |||| ||||||||||||    
T  19996117 tttaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttggtccctgtatctttttt 19996048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 33609402 - 33609338
Alignment:
Q  219 gcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||| |||  |||||||||| ||| ||| ||||||   ||||||||||||||||||||    
T  33609402 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccttgtatctttttt 33609338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 47848888 - 47848856
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||| ||||||||||||||||||||||||||||    
T  47848888 taggtttaaatatgcaaaccgtccctgtaattt 47848856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 52502407 - 52502435
Alignment:
Q  220 cttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||    
T  52502407 cttaaatatgcaaaccgtccctgtaattt 52502435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 55949015 - 55948947
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||||| ||| ||||| ||||||||  ||| ||||||   ||||||| ||||||||||||    
T  55949015 ttaggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatctttttt 55948947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 45981406 - 45981571
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagcttttttcgt 315  Q
    ||||||||||||| ||| ||||| ||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||   |||||||||| |  |  |      
T  45981406 aggcttaaatatgtaaaacgtccttgtaatttcgcgtgtttttgcaaatcgtccttgtatctttttttgtttcaaaatcatccttgtaagttactagccg 45981505  T
Q  316 tttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacg 381  Q
    ||||||| | |||| |||| ||||||||| ||||||||| |    ||| |||||||||||||||||    
T  45981506 tttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggttgcagacggagacacacg 45981571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 8391400 - 8391476
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaa 292  Q
    ||||||||||||| ||| ||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||    
T  8391400 aggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccttgtatctttttttgtttcaaaa 8391476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 8392856 - 8392774
Alignment:
Q  224 aatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaag 305  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||   ||||||||||    
T  8392856 aatatgcaaaccgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaag 8392774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 214 - 305
Target Start/End: Complemental strand, 45982862 - 45982770
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaag 305  Q
    ||||||||| |||||||||| ||||||||||||||| | | ||||||||| || ||| |||||||| |||||||||||||   ||||||||||    
T  45982862 tttaggctttaatatgcaaatcgtccctgtaatttcgcatgtttttgcaaatcatccctgtatctttttttgtttcaaaatcatccttgtaag 45982770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 3990910 - 3990874
Alignment:
Q  212 tatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||| ||||||||||||||||||||||||||||    
T  3990910 tatttaggtttaaatatgcaaaccgtccctgtaattt 3990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 25165890 - 25165929
Alignment:
Q  209 ttttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  25165890 ttttctttcggcttaaatatgcaaaccgtccctgtaattt 25165929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 25166806 - 25166775
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  25166806 aggcttaaatatgcaaaccgtccctgtaattt 25166775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 20289649 - 20289619
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  20289649 ggcttaaatatgcaaaccgtccctgtaattt 20289619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 53529594 - 53529528
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||    ||||||| ||||||||||||    
T  53529594 aggcttaaatatgtaaatcgtccctgtaatttggcgtatttttagttttcgtccctgtatctttttt 53529528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 26052241 - 26052205
Alignment:
Q  212 tatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||| || ||||||||||||||||||||||||||||    
T  26052241 tattttggtttaaatatgcaaaccgtccctgtaattt 26052205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 52935685 - 52935717
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttc 249  Q
    |||||||||||||||| ||||||||||||||||    
T  52935685 aggcttaaatatgcaatccgtccctgtaatttc 52935717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 381
Target Start/End: Original strand, 20587034 - 20587203
Alignment:
Q  213 atttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagcttttt 311  Q
    |||| |||||||||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||   |||||||||| |  |     
T  20587034 attttggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttacta 20587133  T
Q  312 tcgttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacg 381  Q
     |  ||||||| | |||| |||  ||||||||| ||||||||| |    |||||||||||||||||||||    
T  20587134 gccgtttgcaattcgtccctcctgttaactcccgttacaaaaacgttgtggtggcagacggagacacacg 20587203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 493
Target Start/End: Complemental strand, 20588518 - 20588241
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaagct-tttttcgt 315  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||| |||||  |||||||| |||||||||||||   |||||||||| |     |||     
T  20588518 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtctctgtatctttttttgtttcaaaatcatccttgtaagttgccaatcg- 20588420  T
Q  316 tttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacg 415  Q
    ||||||| | |||| |||| ||||||||| ||||||||| |    ||||||||||| ||||||||||||   | |||||  |||||||||     ||| |    
T  20588419 tttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggtggcagacgtagacacacgtggtgaagtgtgagttggcaaaagcttgcttatg 20588320  T
Q  416 tgtcaaaagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    |||||| |||| ||  |||||||||| |   |||||||||||| |||| || || | |||| |||||||||||||||||    
T  20588319 tgtcaagagagatgatgagtggctagaaaggagggaccaaaaccaaaagcgcaaaattgcagagggatgaaattaaaaa 20588241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 28563375 - 28563441
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||||||||||||||||    
T  28563375 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttt 28563441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 28917166 - 28917134
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||||    
T  28917166 taggcttaaatatgcaaaccgtccctgtaattt 28917134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 2237973 - 2238012
Alignment:
Q  210 tttattta-ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  2237973 tttatttatggcttaaatatgcaaaccgtccctgtaattt 2238012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 2238882 - 2238851
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  2238882 aggcttaaatatgcaaaccgtccctgtaattt 2238851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 21716439 - 21716470
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  21716439 aggcttaaatatgcaaaccgtccctgtaattt 21716470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 21720258 - 21720227
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  21720258 aggcttaaatatgcaaaccgtccctgtaattt 21720227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 24559620 - 24559581
Alignment:
Q  209 ttttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  24559620 tttttttttggcttaaatatgcaaaccgtccctgtaattt 24559581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 29090877 - 29090920
Alignment:
Q  205 tttattttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||  |||| ||||||||||||||||||||||||||||||    
T  29090877 tttatttattttacgcttaaatatgcaaaccgtccctgtaattt 29090920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 3149907 - 3149949
Alignment:
Q  206 ttattttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||  ||||||||||||||||||||||| ||||||||    
T  3149907 ttattttataaaggcttaaatatgcaaaccgtccttgtaattt 3149949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 6844169 - 6844091
Alignment:
Q  205 tttattttatttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||| |||||||||||||| |||  |||| ||||| ||| ||| ||||||   ||| ||||||||||||||||    
T  6844169 tttattttatctaggcttaaatatgtaaaaggtccttgtaagttcgcgtgtttttggttttcatccttgtatctttttt 6844091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 28916285 - 28916315
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  28916285 ggcttaaatatgcaaaccgtccctgtaattt 28916315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 45493095 - 45493026
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||||| |||  |||||||||| ||| ||| ||||||   ||||||| ||||||||||||    
T  45493095 tttaggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgtatctttttt 45493026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 45500837 - 45500768
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||||| |||  |||||||||| ||| ||| ||||||   ||||||| ||||||||||||    
T  45500837 tttaggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgtatctttttt 45500768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 28563604 - 28563652
Alignment:
Q  445 cagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    ||||||||||||| ||||||||||  || ||||||||| ||||||||||    
T  28563604 cagggaccaaaaccaaaaacgaaaaggtacaaagggataaaattaaaaa 28563652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 34591721 - 34591793
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatcttttttgtt 286  Q
    |||||||||||||||| ||| ||||| ||||| ||   ||||||||    |||||||||||||||||||||||    
T  34591721 tttaggcttaaatatgtaaatcgtccatgtaagtttgtgtattttttgttttcgtccttgtatcttttttgtt 34591793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 493
Target Start/End: Complemental strand, 9130 - 8851
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaagct-tttttc 313  Q
    ||||||| |||||||||| ||||||||||||||  ||| ||||||||| |||||| |||||||| |||||||||| ||   |||||||||| |     ||    
T  9130 taggctttaatatgcaaaacgtccctgtaattttgcgtgtttttgcaaatcgtccctgtatctttttttgtttcagaatcatccttgtaagttgccaatc 9031  T
Q  314 gttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgtta 413  Q
    | ||||||| | |||| |||| ||||||||| ||||||||| |    ||||| ||||||||||||||||||   | |||||  |||||||||   |||||    
T  9030 g-tttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggtggtagacggagacacacgtggtgaagtgtgagttggcaaaagctttgtta 8932  T
Q  414 cgtgtcaaaagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
     ||||||| |||| ||  |||||||||| |   |||||||||||| |||| || || | |||| |||||||||||||||||    
T  8931 tgtgtcaagagagatgatgagtggctagaaaggagggaccaaaaccaaaaccgcaaaattgcagagggatgaaattaaaaa 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 7701 - 7763
Alignment:
Q  221 ttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||| ||| ||||||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  7701 ttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttt 7763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 207 - 385
Target Start/End: Complemental strand, 10516 - 10337
Alignment:
Q  207 tattttatttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctt-ttttgtttcaaaactctccttgtaag 305  Q
    |||| |||||||||||||||||| ||| | || || ||||||| ||| ||||||||| |||||| |||||||| |||||||||||||   ||||| ||||    
T  10516 tattatatttaggcttaaatatgtaaaacatctctataatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttataag 10417  T
Q  306 cttttttcgttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggc 385  Q
     |  |  |  ||||||| | |||| |||| ||||||||| ||||||||| |    |||||||||||||||||||||||||    
T  10416 ttactagccgtttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggtggcagacggagacacacgtggc 10337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 9019 - 9108
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaag 305  Q
    |||||| |||||||||| ||| ||||||||||| |||  |||||||| ||||||||||||| |||||||||||||||   ||||||||||    
T  9019 aggctttaatatgcaaaacgttcctgtaatttcgcgtgattttgcaaatcgtccttgtatctttttttgtttcaaaatcatccttgtaag 9108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 8330 - 8241
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaag 305  Q
    |||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||| | |||| |||||||||||||||   ||||||||||    
T  8330 aggcttgaatatgcaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctatatctttttttgtttcaaaatcatccttgtaag 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 493
Target Start/End: Original strand, 35505528 - 35505799
Alignment:
Q  224 aatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagct-tttttcgttttgca 321  Q
    |||||||||| ||||||||||||||| ||| |||||| || |||||| |||||| |||||||||||||||   |||||||||| |     ||| ||||||    
T  35505528 aatatgcaaaacgtccctgtaatttcgcgtgtttttgtaaatcgtccatgtatctttttttgtttcaaaatcatccttgtaagttgccaatcg-tttgca 35505626  T
Q  322 aatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacacgtggcttactgtgacctggcaaaaggagtgttacgtgtcaa 421  Q
    | | |||| |||| |||||||||  ||||||||||    ||||||||||||||||| ||||||   | |||||  |||||||||   | ||| || ||||    
T  35505627 attcgtccctcccgttaactcccgctacaaaaatgttgtggtggcagacggagacagacgtggtgaagtgtgagttggcaaaagctttcttatgtttcaa 35505726  T
Q  422 aagagttggggagtggctag-attcagggaccaaaacgaaaaacgaaagagtgcaaagggatgaaattaaaaa 493  Q
    ||||| ||  |||||||||| |   || ||| ||||| |||| || || | ||||||||||||||||||||||    
T  35505727 aagagatgatgagtggctagaaaggagagacaaaaaccaaaagcgcaaaattgcaaagggatgaaattaaaaa 35505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 25264338 - 25264405
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||||||||||||||||    
T  25264338 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttt 25264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 35506990 - 35506824
Alignment:
Q  215 ttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatc-ttttttgtttcaaaactctccttgtaagcttttttc 313  Q
    ||||||||||||||| ||| ||||  ||||||||  ||| ||||||||| |||||| | |||| |||||| ||||||||   |||||||||| |  |  |    
T  35506990 ttaggcttaaatatgtaaaacgtctttgtaattttgcgtgtttttgcaaatcgtccctatatctttttttatttcaaaatcatccttgtaagttactagc 35506891  T
Q  314 gttttgcaaatggtccttcccattaactcccattacaaaaatggctaggtggcagacggagacacac 380  Q
      ||||||| | |||| |||| ||||||||| ||||||||| |    ||||||||||||||||||||    
T  35506890 cgtttgcaattcgtccctcccgttaactcccgttacaaaaacgttgtggtggcagacggagacacac 35506824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 1939441 - 1939480
Alignment:
Q  209 ttttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  1939441 ttttttttaggcttaaatatgcaaactgtccctgtaattt 1939480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 3158098 - 3158031
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    |||||||||||||| ||| ||||||||||| ||| ||| ||||||   ||||||| ||||||||||||    
T  3158098 taggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttt 3158031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 23154369 - 23154338
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  23154369 aggcttaaatatgcaaaccgtccctgtaattt 23154338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 11761038 - 11761068
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  11761038 ggcttaaatatgcaaaccgtccctgtaattt 11761068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 23153548 - 23153578
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  23153548 ggcttaaatatgcaaaccgtccctgtaattt 23153578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 26635510 - 26635540
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  26635510 ggcttaaatatgcaaaccgtccctgtaattt 26635540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 9122721 - 9122753
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||| ||||||||||||||||||    
T  9122721 taggcttaaatatggaaaccgtccctgtaattt 9122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 37586724 - 37586752
Alignment:
Q  220 cttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||    
T  37586724 cttaaatatgcaaaccgtccctgtaattt 37586752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 24051245 - 24051285
Alignment:
Q  208 attttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  24051245 attttttttaggcttaaatatgcaaaccgtccctgtaattt 24051285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 7678707 - 7678636
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatcttttttgtttc 288  Q
    ||||||||||||| ||| ||||||||||||||  ||| |||||||  || ||||||||||||||||| ||||    
T  7678707 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgctttttgtccttgtatcttttttttttc 7678636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 2956293 - 2956229
Alignment:
Q  219 gcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||| ||| |||||||||||||| | || ||||||   ||||||||||||||||||||    
T  2956293 gcttaaatatgtaaatcgtccctgtaatttgatgtgtttttggttttcgtccttgtatctttttt 2956229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 9699225 - 9699185
Alignment:
Q  208 attttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  9699225 atttaatttaggtttaaatatgcaaaccgtccctgtaattt 9699185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 356
Target Start/End: Original strand, 31994675 - 31994823
Alignment:
Q  209 ttttatttaggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatcttttttgt-ttcaaaactctccttgtaagct 307  Q
    ||||| || |||||||||||||||| ||| | ||||| ||| ||| |||||||||||  ||| |||||||||||| | ||||||||  ||||| |||| |    
T  31994675 ttttaatttggcttaaatatgcaaaacgttcatgtaagttcgcgtgtttttgcaatttttccctgtatcttttttttcttcaaaaccatccttataagtt 31994774  T
Q  308 tttttcgttttgcaaatggtccttcccattaactcccattacaaaaatg 356  Q
     ||  |  ||||||| | |||| |||| ||||| ||| |||||||||||    
T  31994775 gttaaccatttgcaattagtccctcccgttaacacccgttacaaaaatg 31994823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 6159753 - 6159784
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  6159753 aggcttaaatatgcaaaccgtccctgtaattt 6159784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 28302224 - 28302193
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  28302224 aggcttaaatatgcaaaccgtccctgtaattt 28302193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 28509849 - 28509880
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||||    
T  28509849 aggcttaaatatgcaaaccgtccctgtaattt 28509880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 1258500 - 1258434
Alignment:
Q  217 aggcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||||| ||| ||||||||||||||  ||| ||||||   ||||||| ||||||||||||    
T  1258500 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttt 1258434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 29979284 - 29979254
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  29979284 ggcttaaatatgcaaaccgtccctgtaattt 29979254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 24052053 - 24052024
Alignment:
Q  219 gcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||||||||||||||||||||||||||||    
T  24052053 gcttaaatatgcaaaccgtccctgtaattt 24052024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 19084178 - 19084114
Alignment:
Q  219 gcttaaatatgcaaaccgtccctgtaatttcacgtatttttgcaattcgtccttgtatctttttt 283  Q
    ||||||||||| ||||||||||||||||||  ||| ||||||   || |||| ||||||||||||    
T  19084178 gcttaaatatgtaaaccgtccctgtaatttagcgtgtttttggtttttgtccctgtatctttttt 19084114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 22352959 - 22352991
Alignment:
Q  216 taggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||| ||||||    
T  22352959 taggcttaaatatgcaaaccgtccctataattt 22352991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 10302 - 10336
Alignment:
Q  214 tttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||||||    
T  10302 tttaggcttaaatatgcaaaccgtccctgtaattt 10336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 416 - 386
Alignment:
Q  218 ggcttaaatatgcaaaccgtccctgtaattt 248  Q
    |||||||||||||||||||||||||||||||    
T  416 ggcttaaatatgcaaaccgtccctgtaattt 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 1070 - 1110
Alignment:
Q  208 attttatttaggcttaaatatgcaaaccgtccctgtaattt 248  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  1070 attttttttaggcttaaatatgcaattcgtccctgtaattt 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3618 times since January 2019
Visitors: 4816