View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0766_low_57 (Length: 236)
Name: NF0766_low_57
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0766_low_57 |
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Alignment Details
Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 6062588 - 6062722
Alignment:
| Q |
90 |
aacttcagcaccatcaaaagcccaactattcttaaaacgaatcgccgcctcttcctccgccgtaagatcattctcgataccaaaatagtttctcacatac |
189 |
Q |
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|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6062588 |
aacttcagcaccatcaaaagtccaactattcttaaaacgaatcgccgcctcttcctccgccgtaagatcattctcgataccaaaatagtttctcacatac |
6062687 |
T |
|
| Q |
190 |
acaacattcttattcttgatccgatccgcaacagc |
224 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |
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| T |
6062688 |
acaacattcttattcttgatccgatccgcaacagc |
6062722 |
T |
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