View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0766_low_9 (Length: 513)

Name: NF0766_low_9
Description: NF0766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0766_low_9
NF0766_low_9
[»] chr3 (81 HSPs)
chr3 (22-181)||(12917211-12917370)
chr3 (28-181)||(3527068-3527221)
chr3 (48-181)||(22841210-22841343)
chr3 (12-181)||(25202124-25202292)
chr3 (31-180)||(14641463-14641611)
chr3 (42-181)||(45803257-45803395)
chr3 (11-181)||(48043371-48043540)
chr3 (247-372)||(16979712-16979837)
chr3 (22-180)||(29907628-29907785)
chr3 (22-180)||(29948794-29948951)
chr3 (22-180)||(29997948-29998105)
chr3 (117-181)||(54875474-54875538)
chr3 (22-179)||(24548867-24549016)
chr3 (285-372)||(26054598-26054685)
chr3 (107-181)||(14442163-14442237)
chr3 (285-371)||(22652574-22652660)
chr3 (112-181)||(2841501-2841570)
chr3 (112-169)||(6156710-6156767)
chr3 (113-181)||(6159393-6159461)
chr3 (112-180)||(14520435-14520503)
chr3 (22-147)||(21845561-21845682)
chr3 (247-331)||(6805054-6805138)
chr3 (116-180)||(14152398-14152462)
chr3 (112-180)||(17208513-17208581)
chr3 (117-181)||(17669698-17669762)
chr3 (117-181)||(17684835-17684899)
chr3 (285-372)||(15465896-15465983)
chr3 (285-371)||(5224126-5224211)
chr3 (116-181)||(24547188-24547253)
chr3 (250-322)||(12917443-12917515)
chr3 (129-181)||(50755266-50755318)
chr3 (52-180)||(3160561-3160689)
chr3 (112-180)||(5215636-5215704)
chr3 (438-493)||(12918472-12918526)
chr3 (113-180)||(15566733-15566800)
chr3 (438-489)||(25200864-25200914)
chr3 (438-493)||(48630228-48630282)
chr3 (116-181)||(16050915-16050980)
chr3 (112-165)||(19568203-19568256)
chr3 (438-493)||(3528589-3528643)
chr3 (112-147)||(13185917-13185952)
chr3 (112-147)||(40808018-40808053)
chr3 (112-147)||(40812855-40812890)
chr3 (112-147)||(44274440-44274475)
chr3 (284-350)||(43549818-43549884)
chr3 (284-350)||(55291764-55291830)
chr3 (128-181)||(2247877-2247930)
chr3 (114-147)||(5200240-5200273)
chr3 (31-80)||(10558981-10559030)
chr3 (106-174)||(6003181-6003248)
chr3 (31-75)||(6468254-6468298)
chr3 (31-75)||(10380031-10380075)
chr3 (445-493)||(15026304-15026351)
chr3 (112-147)||(10563730-10563765)
chr3 (116-147)||(15446867-15446898)
chr3 (112-147)||(33565109-33565144)
chr3 (112-147)||(35960923-35960958)
chr3 (247-322)||(45803464-45803539)
chr3 (107-165)||(9510906-9510964)
chr3 (107-165)||(9518881-9518939)
chr3 (113-147)||(11563747-11563781)
chr3 (117-147)||(17044988-17045018)
chr3 (117-147)||(17047148-17047178)
chr3 (113-147)||(17518869-17518903)
chr3 (113-147)||(17533731-17533765)
chr3 (117-147)||(17541456-17541486)
chr3 (117-147)||(22306583-22306613)
chr3 (262-340)||(29907468-29907546)
chr3 (262-340)||(29948634-29948712)
chr3 (262-340)||(29997788-29997866)
chr3 (31-65)||(46823180-46823214)
chr3 (109-147)||(48631353-48631391)
chr3 (22-80)||(48631435-48631493)
chr3 (113-147)||(49900752-49900786)
chr3 (284-346)||(50350981-50351043)
chr3 (116-165)||(24177735-24177784)
chr3 (284-348)||(42353-42417)
chr3 (445-493)||(6002012-6002059)
chr3 (284-340)||(13437072-13437128)
chr3 (247-331)||(13522475-13522559)
chr3 (117-145)||(41172371-41172399)
[»] chr8 (60 HSPs)
chr8 (22-181)||(22610172-22610331)
chr8 (22-179)||(20879463-20879619)
chr8 (28-181)||(23884159-23884309)
chr8 (48-181)||(22483926-22484058)
chr8 (48-181)||(22345152-22345286)
chr8 (48-181)||(22356812-22356946)
chr8 (31-180)||(22208258-22208405)
chr8 (112-181)||(21399705-21399774)
chr8 (112-181)||(21794198-21794267)
chr8 (247-372)||(16198636-16198761)
chr8 (247-369)||(25657641-25657763)
chr8 (285-372)||(14397074-14397160)
chr8 (247-351)||(12037291-12037395)
chr8 (112-180)||(18816290-18816358)
chr8 (121-181)||(22483774-22483834)
chr8 (247-369)||(23478885-23479007)
chr8 (117-169)||(18834422-18834474)
chr8 (116-180)||(36732411-36732475)
chr8 (117-180)||(21514680-21514743)
chr8 (117-180)||(22258306-22258369)
chr8 (20-179)||(36305988-36306158)
chr8 (116-180)||(4380616-4380680)
chr8 (116-180)||(12577869-12577932)
chr8 (107-165)||(22532122-22532180)
chr8 (107-165)||(22536807-22536865)
chr8 (285-372)||(19880630-19880710)
chr8 (107-147)||(20397500-20397540)
chr8 (106-174)||(22708313-22708380)
chr8 (109-180)||(21678838-21678907)
chr8 (438-493)||(23885394-23885448)
chr8 (113-147)||(20022036-20022070)
chr8 (31-80)||(17611210-17611259)
chr8 (116-165)||(17906848-17906897)
chr8 (128-181)||(18023567-18023620)
chr8 (111-180)||(21676494-21676561)
chr8 (285-368)||(26454517-26454593)
chr8 (128-181)||(38184923-38184976)
chr8 (445-493)||(22310686-22310733)
chr8 (116-147)||(5761555-5761586)
chr8 (112-147)||(6101748-6101783)
chr8 (116-147)||(17158962-17158993)
chr8 (116-147)||(19880844-19880875)
chr8 (247-322)||(22483630-22483705)
chr8 (116-147)||(23479104-23479135)
chr8 (438-489)||(23882777-23882827)
chr8 (112-147)||(23899982-23900017)
chr8 (116-147)||(26454730-26454761)
chr8 (112-147)||(31722488-31722523)
chr8 (112-147)||(36727033-36727068)
chr8 (112-147)||(45469214-45469249)
chr8 (109-147)||(20517028-20517066)
chr8 (114-180)||(21676590-21676654)
chr8 (284-348)||(8413911-8413975)
chr8 (31-63)||(18834541-18834573)
chr8 (284-348)||(19882773-19882837)
chr8 (107-147)||(22317901-22317941)
chr8 (461-493)||(22343817-22343849)
chr8 (461-493)||(22355477-22355509)
chr8 (107-147)||(22474778-22474818)
chr8 (107-147)||(36405122-36405162)
[»] chr1 (68 HSPs)
chr1 (22-181)||(34392756-34392915)
chr1 (247-372)||(17901929-17902055)
chr1 (247-370)||(6833968-6834094)
chr1 (31-181)||(8306594-8306743)
chr1 (42-181)||(17901719-17901858)
chr1 (247-348)||(21239170-21239271)
chr1 (247-372)||(46197872-46197997)
chr1 (22-181)||(35895087-35895246)
chr1 (52-180)||(39061310-39061437)
chr1 (247-350)||(8306426-8306529)
chr1 (113-181)||(45499530-45499598)
chr1 (112-180)||(50544861-50544929)
chr1 (247-350)||(7052140-7052243)
chr1 (117-180)||(22145666-22145729)
chr1 (113-180)||(38056668-38056735)
chr1 (111-181)||(20588624-20588696)
chr1 (111-181)||(20593162-20593234)
chr1 (247-372)||(50001276-50001401)
chr1 (262-350)||(24723602-24723690)
chr1 (114-177)||(635001-635064)
chr1 (113-180)||(28476730-28476797)
chr1 (48-181)||(6834164-6834297)
chr1 (52-137)||(21187968-21188054)
chr1 (293-372)||(29763805-29763884)
chr1 (113-179)||(12710857-12710923)
chr1 (22-76)||(28476627-28476681)
chr1 (247-316)||(21243864-21243933)
chr1 (107-151)||(7703140-7703184)
chr1 (120-180)||(24719514-24719573)
chr1 (107-169)||(21168933-21168995)
chr1 (107-165)||(24723341-24723399)
chr1 (438-492)||(34391776-34391829)
chr1 (112-165)||(7051917-7051970)
chr1 (116-181)||(51336467-51336532)
chr1 (116-180)||(8275988-8276052)
chr1 (117-181)||(16401901-16401963)
chr1 (249-321)||(22145798-22145870)
chr1 (22-80)||(12710968-12711027)
chr1 (284-350)||(23194675-23194741)
chr1 (318-372)||(35894010-35894064)
chr1 (256-322)||(35894949-35895015)
chr1 (116-181)||(12327742-12327807)
chr1 (112-165)||(21239044-21239097)
chr1 (284-348)||(297181-297245)
chr1 (31-75)||(20846338-20846382)
chr1 (116-180)||(24007224-24007287)
chr1 (31-75)||(28193561-28193605)
chr1 (112-147)||(4595848-4595883)
chr1 (112-147)||(13302924-13302959)
chr1 (116-147)||(29763631-29763662)
chr1 (112-147)||(42913071-42913106)
chr1 (116-147)||(46197744-46197775)
chr1 (107-137)||(7320584-7320614)
chr1 (113-147)||(16058310-16058344)
chr1 (117-147)||(19676733-19676763)
chr1 (106-180)||(20708048-20708121)
chr1 (117-147)||(21046049-21046079)
chr1 (284-350)||(22130188-22130254)
chr1 (31-65)||(38056589-38056623)
chr1 (107-165)||(51324508-51324566)
chr1 (43-80)||(14237582-14237619)
chr1 (251-372)||(21188164-21188284)
chr1 (48-147)||(21243688-21243788)
chr1 (43-80)||(46560166-46560203)
chr1 (445-493)||(6832971-6833018)
chr1 (445-493)||(12709490-12709537)
chr1 (445-493)||(20709262-20709309)
chr1 (445-489)||(21190538-21190581)
[»] scaffold0086 (2 HSPs)
scaffold0086 (22-181)||(35091-35250)
scaffold0086 (286-350)||(35652-35716)
[»] chr7 (81 HSPs)
chr7 (12-179)||(38299738-38299905)
chr7 (12-181)||(36300536-36300705)
chr7 (247-369)||(19282849-19282971)
chr7 (247-372)||(13315208-13315333)
chr7 (48-181)||(13315012-13315146)
chr7 (48-181)||(13744440-13744574)
chr7 (48-181)||(18570635-18570768)
chr7 (247-350)||(47975018-47975121)
chr7 (48-181)||(15700666-15700799)
chr7 (113-181)||(58409-58477)
chr7 (116-180)||(8488093-8488157)
chr7 (116-180)||(8513752-8513816)
chr7 (109-181)||(33556097-33556169)
chr7 (52-181)||(8930700-8930829)
chr7 (247-350)||(12754792-12754895)
chr7 (247-372)||(16550129-16550254)
chr7 (247-372)||(16615408-16615533)
chr7 (247-372)||(32160327-32160452)
chr7 (112-180)||(708424-708492)
chr7 (33-147)||(12127080-12127193)
chr7 (112-180)||(15575644-15575712)
chr7 (285-372)||(1856564-1856651)
chr7 (285-372)||(13917736-13917823)
chr7 (114-181)||(16250219-16250286)
chr7 (107-181)||(15720767-15720841)
chr7 (112-181)||(20252177-20252246)
chr7 (247-340)||(38295434-38295527)
chr7 (107-180)||(47095441-47095514)
chr7 (117-170)||(43276744-43276797)
chr7 (117-181)||(25943255-25943319)
chr7 (116-180)||(43745645-43745709)
chr7 (112-171)||(18874660-18874719)
chr7 (113-180)||(19195601-19195667)
chr7 (285-372)||(25926463-25926550)
chr7 (438-493)||(36301872-36301926)
chr7 (117-174)||(19283051-19283108)
chr7 (121-181)||(15700887-15700947)
chr7 (116-181)||(48212726-48212793)
chr7 (438-493)||(37538116-37538170)
chr7 (112-170)||(3287743-3287801)
chr7 (43-147)||(44374865-44374968)
chr7 (43-147)||(44383730-44383833)
chr7 (438-491)||(38294197-38294249)
chr7 (116-180)||(4690662-4690726)
chr7 (42-141)||(16463097-16463196)
chr7 (107-147)||(24269937-24269977)
chr7 (445-493)||(33059348-33059395)
chr7 (48-147)||(37539470-37539570)
chr7 (247-299)||(48274357-48274409)
chr7 (112-147)||(20586374-20586409)
chr7 (112-147)||(48807320-48807355)
chr7 (284-350)||(4325919-4325985)
chr7 (284-350)||(14105590-14105656)
chr7 (284-350)||(14415607-14415673)
chr7 (42-80)||(19195714-19195752)
chr7 (262-331)||(708663-708732)
chr7 (285-372)||(29052347-29052427)
chr7 (76-147)||(8851120-8851189)
chr7 (445-493)||(11314302-11314349)
chr7 (113-165)||(20214151-20214203)
chr7 (286-350)||(37539270-37539334)
chr7 (116-147)||(4071842-4071873)
chr7 (116-147)||(12754611-12754642)
chr7 (112-147)||(14218890-14218925)
chr7 (116-147)||(29052181-29052212)
chr7 (438-493)||(33557329-33557383)
chr7 (116-147)||(35771440-35771471)
chr7 (117-147)||(12372296-12372326)
chr7 (117-147)||(12465260-12465290)
chr7 (117-147)||(13147472-13147502)
chr7 (117-147)||(16078352-16078382)
chr7 (284-350)||(44190379-44190445)
chr7 (128-181)||(831861-831914)
chr7 (128-181)||(1197041-1197094)
chr7 (116-165)||(47974819-47974868)
chr7 (76-147)||(12322891-12322960)
chr7 (107-147)||(15095627-15095667)
chr7 (445-493)||(21660083-21660130)
chr7 (117-165)||(33002157-33002205)
chr7 (103-147)||(33060460-33060504)
chr7 (284-340)||(42565996-42566052)
[»] chr4 (45 HSPs)
chr4 (28-181)||(9622477-9622630)
chr4 (28-181)||(10273371-10273525)
chr4 (48-181)||(55583184-55583322)
chr4 (22-147)||(13165154-13165279)
chr4 (247-369)||(10694372-10694494)
chr4 (247-350)||(16296693-16296796)
chr4 (22-181)||(25513839-25514010)
chr4 (248-350)||(35660710-35660812)
chr4 (112-180)||(14631124-14631192)
chr4 (112-180)||(16296927-16296995)
chr4 (247-350)||(14549472-14549575)
chr4 (285-372)||(15008768-15008855)
chr4 (285-369)||(10908176-10908260)
chr4 (113-180)||(9638999-9639066)
chr4 (247-350)||(19434786-19434889)
chr4 (70-180)||(33186892-33187000)
chr4 (117-180)||(12424290-12424355)
chr4 (116-177)||(13847193-13847254)
chr4 (247-372)||(40620332-40620457)
chr4 (112-180)||(15239811-15239879)
chr4 (116-179)||(26446197-26446260)
chr4 (112-165)||(19434554-19434607)
chr4 (123-180)||(35660945-35661002)
chr4 (441-493)||(9621355-9621406)
chr4 (31-75)||(15191285-15191329)
chr4 (438-493)||(10282899-10282953)
chr4 (112-147)||(15115244-15115279)
chr4 (54-179)||(18463014-18463139)
chr4 (116-179)||(2424386-2424449)
chr4 (112-147)||(9924176-9924211)
chr4 (112-147)||(14549782-14549817)
chr4 (116-147)||(15008985-15009016)
chr4 (116-147)||(21062663-21062694)
chr4 (112-147)||(37019692-37019727)
chr4 (117-147)||(11425965-11425995)
chr4 (103-177)||(14477624-14477697)
chr4 (131-181)||(15747787-15747837)
chr4 (117-147)||(25091675-25091705)
chr4 (117-147)||(35811376-35811406)
chr4 (113-147)||(40230328-40230362)
chr4 (117-147)||(53630474-53630504)
chr4 (107-147)||(12623338-12623378)
chr4 (445-489)||(14476524-14476567)
chr4 (113-149)||(19022364-19022400)
chr4 (284-348)||(28386069-28386133)
[»] scaffold0048 (1 HSPs)
scaffold0048 (28-181)||(68637-68790)
[»] chr5 (34 HSPs)
chr5 (20-181)||(20313265-20313424)
chr5 (48-180)||(16063740-16063873)
chr5 (25-147)||(21504161-21504282)
chr5 (31-181)||(32607229-32607380)
chr5 (112-180)||(18744863-18744931)
chr5 (31-170)||(21398546-21398697)
chr5 (247-372)||(17011528-17011653)
chr5 (247-372)||(265838-265963)
chr5 (247-372)||(29448640-29448765)
chr5 (117-180)||(23199207-23199270)
chr5 (247-350)||(36508870-36508973)
chr5 (48-165)||(31622121-31622239)
chr5 (122-181)||(31621964-31622023)
chr5 (112-180)||(6551285-6551353)
chr5 (12-80)||(26758602-26758670)
chr5 (121-171)||(1627071-1627121)
chr5 (112-147)||(20469171-20469206)
chr5 (247-310)||(20765373-20765436)
chr5 (113-147)||(21300040-21300074)
chr5 (284-346)||(21398962-21399024)
chr5 (113-147)||(21617924-21617958)
chr5 (116-173)||(660785-660841)
chr5 (107-147)||(20566568-20566608)
chr5 (284-348)||(33472726-33472790)
chr5 (117-181)||(36508633-36508697)
chr5 (116-147)||(17011750-17011781)
chr5 (117-147)||(266060-266090)
chr5 (247-340)||(21503971-21504064)
chr5 (120-181)||(30616602-30616663)
chr5 (461-493)||(21402109-21402141)
chr5 (445-493)||(21403479-21403526)
chr5 (103-147)||(21404107-21404151)
chr5 (445-493)||(21419703-21419750)
chr5 (284-348)||(27868737-27868801)
[»] chr2 (49 HSPs)
chr2 (28-181)||(28344899-28345052)
chr2 (22-181)||(23801484-23801649)
chr2 (42-181)||(36734376-36734513)
chr2 (31-147)||(17307508-17307623)
chr2 (112-180)||(21315471-21315539)
chr2 (112-180)||(21335261-21335329)
chr2 (247-350)||(149633-149736)
chr2 (285-372)||(18358132-18358219)
chr2 (247-372)||(25183989-25184114)
chr2 (285-372)||(31345921-31346008)
chr2 (22-180)||(21369282-21369452)
chr2 (251-342)||(14183597-14183688)
chr2 (285-372)||(21915424-21915511)
chr2 (285-370)||(21081134-21081219)
chr2 (247-331)||(1383779-1383863)
chr2 (116-180)||(23610615-23610679)
chr2 (247-331)||(28652678-28652762)
chr2 (25-80)||(14179624-14179679)
chr2 (247-314)||(23801351-23801418)
chr2 (113-171)||(149497-149555)
chr2 (438-493)||(19196946-19197000)
chr2 (22-80)||(14183359-14183417)
chr2 (247-330)||(14179855-14179938)
chr2 (112-147)||(24516208-24516243)
chr2 (112-147)||(27852690-27852725)
chr2 (113-147)||(3539859-3539893)
chr2 (113-147)||(22501993-22502027)
chr2 (113-147)||(22509927-22509961)
chr2 (113-147)||(25142226-25142260)
chr2 (116-165)||(357885-357934)
chr2 (251-352)||(19647054-19647155)
chr2 (43-80)||(27852765-27852802)
chr2 (445-493)||(14184904-14184951)
chr2 (284-348)||(23338562-23338626)
chr2 (103-147)||(45535947-45535991)
chr2 (104-179)||(20005958-20006032)
chr2 (116-147)||(21080968-21080999)
chr2 (116-147)||(40912342-40912373)
chr2 (117-147)||(2523747-2523777)
chr2 (117-147)||(5031129-5031159)
chr2 (284-350)||(20590445-20590511)
chr2 (117-147)||(24780840-24780870)
chr2 (116-181)||(34491239-34491304)
chr2 (284-350)||(41301092-41301158)
chr2 (103-137)||(45528563-45528597)
chr2 (251-361)||(45535737-45535847)
chr2 (43-80)||(22695322-22695359)
chr2 (438-478)||(28346457-28346496)
chr2 (445-493)||(30212667-30212714)
[»] scaffold0035 (2 HSPs)
scaffold0035 (22-181)||(43692-43849)
scaffold0035 (22-155)||(39000-39132)
[»] chr6 (44 HSPs)
chr6 (247-372)||(29045064-29045189)
chr6 (22-147)||(1818974-1819099)
chr6 (28-178)||(13285739-13285890)
chr6 (31-180)||(19825401-19825549)
chr6 (75-181)||(10446205-10446311)
chr6 (42-136)||(35057577-35057671)
chr6 (48-181)||(29045259-29045392)
chr6 (247-372)||(15891696-15891821)
chr6 (247-372)||(15900781-15900906)
chr6 (285-369)||(27557467-27557551)
chr6 (285-372)||(23415706-23415793)
chr6 (107-180)||(18982561-18982634)
chr6 (116-180)||(21683074-21683138)
chr6 (113-180)||(23658078-23658145)
chr6 (247-331)||(25921842-25921926)
chr6 (304-371)||(15173637-15173704)
chr6 (117-180)||(20410512-20410575)
chr6 (107-147)||(30673392-30673432)
chr6 (52-155)||(34140390-34140493)
chr6 (52-155)||(34153006-34153109)
chr6 (438-493)||(10444944-10444998)
chr6 (112-147)||(15890707-15890742)
chr6 (438-493)||(35056134-35056188)
chr6 (107-165)||(19167843-19167901)
chr6 (107-165)||(19235127-19235185)
chr6 (107-165)||(28948579-28948637)
chr6 (441-493)||(1817795-1817846)
chr6 (445-493)||(13803022-13803069)
chr6 (116-180)||(15998878-15998942)
chr6 (247-331)||(25601453-25601537)
chr6 (109-179)||(18459296-18459366)
chr6 (112-147)||(24267871-24267906)
chr6 (117-147)||(7827994-7828024)
chr6 (107-165)||(18585809-18585867)
chr6 (113-147)||(18928703-18928737)
chr6 (117-147)||(23150287-23150317)
chr6 (31-65)||(23658190-23658224)
chr6 (31-65)||(34964099-34964133)
chr6 (284-348)||(13765172-13765236)
chr6 (76-147)||(19655192-19655261)
chr6 (284-348)||(23956688-23956752)
chr6 (76-147)||(27125438-27125507)
chr6 (284-348)||(31021884-31021948)
chr6 (286-350)||(35057366-35057430)
[»] scaffold0004 (6 HSPs)
scaffold0004 (247-372)||(66206-66330)
scaffold0004 (48-181)||(73075-73209)
scaffold0004 (48-181)||(75925-76059)
scaffold0004 (113-181)||(111348-111416)
scaffold0004 (45-181)||(66000-66136)
scaffold0004 (116-147)||(328287-328318)
[»] scaffold0369 (1 HSPs)
scaffold0369 (48-180)||(15547-15678)
[»] scaffold0031 (1 HSPs)
scaffold0031 (48-181)||(127273-127407)
[»] scaffold1939 (1 HSPs)
scaffold1939 (35-147)||(149-261)
[»] scaffold0878 (1 HSPs)
scaffold0878 (48-180)||(3353-3485)
[»] scaffold0057 (2 HSPs)
scaffold0057 (247-372)||(69980-70105)
scaffold0057 (116-147)||(69852-69883)
[»] scaffold0594 (2 HSPs)
scaffold0594 (247-346)||(2066-2165)
scaffold0594 (110-181)||(2235-2306)
[»] scaffold0148 (2 HSPs)
scaffold0148 (48-170)||(8843-8966)
scaffold0148 (247-340)||(8673-8766)
[»] scaffold0138 (4 HSPs)
scaffold0138 (247-372)||(20897-21022)
scaffold0138 (294-372)||(33913-33990)
scaffold0138 (116-147)||(21119-21150)
scaffold0138 (116-147)||(34134-34165)
[»] scaffold0098 (1 HSPs)
scaffold0098 (112-181)||(40095-40164)
[»] scaffold0046 (1 HSPs)
scaffold0046 (247-372)||(21904-22029)
[»] scaffold0730 (2 HSPs)
scaffold0730 (50-181)||(6437-6569)
scaffold0730 (247-340)||(6631-6724)
[»] scaffold0676 (2 HSPs)
scaffold0676 (113-180)||(2870-2937)
scaffold0676 (247-350)||(2636-2739)
[»] scaffold0149 (3 HSPs)
scaffold0149 (247-350)||(21362-21465)
scaffold0149 (112-164)||(21616-21668)
scaffold0149 (112-147)||(29568-29603)
[»] scaffold0026 (1 HSPs)
scaffold0026 (247-350)||(21944-22047)
[»] scaffold0083 (3 HSPs)
scaffold0083 (247-372)||(1737-1862)
scaffold0083 (116-163)||(5044-5091)
scaffold0083 (116-163)||(10754-10801)
[»] scaffold0034 (1 HSPs)
scaffold0034 (247-372)||(29343-29468)
[»] scaffold1186 (1 HSPs)
scaffold1186 (112-180)||(2009-2077)
[»] scaffold0174 (3 HSPs)
scaffold0174 (113-181)||(19844-19912)
scaffold0174 (34-178)||(5445-5588)
scaffold0174 (117-181)||(11604-11668)
[»] scaffold0005 (1 HSPs)
scaffold0005 (112-180)||(186191-186259)
[»] scaffold0220 (3 HSPs)
scaffold0220 (113-180)||(13938-14005)
scaffold0220 (116-147)||(19976-20007)
scaffold0220 (31-63)||(14052-14084)
[»] scaffold0200 (1 HSPs)
scaffold0200 (285-372)||(18395-18482)
[»] scaffold0061 (4 HSPs)
scaffold0061 (57-179)||(14526-14648)
scaffold0061 (57-179)||(23584-23706)
scaffold0061 (285-348)||(14751-14814)
scaffold0061 (285-348)||(23809-23872)
[»] scaffold0436 (2 HSPs)
scaffold0436 (247-372)||(8760-8885)
scaffold0436 (116-147)||(8982-9013)
[»] scaffold0414 (1 HSPs)
scaffold0414 (117-178)||(11160-11221)
[»] scaffold0007 (3 HSPs)
scaffold0007 (107-180)||(16409-16482)
scaffold0007 (107-178)||(18691-18762)
scaffold0007 (457-492)||(83234-83269)
[»] scaffold0379 (2 HSPs)
scaffold0379 (117-181)||(10936-10999)
scaffold0379 (22-80)||(11048-11106)
[»] scaffold0205 (1 HSPs)
scaffold0205 (22-181)||(5520-5678)
[»] scaffold0056 (2 HSPs)
scaffold0056 (116-180)||(18264-18328)
scaffold0056 (112-147)||(67143-67178)
[»] scaffold0555 (1 HSPs)
scaffold0555 (113-176)||(8742-8805)
[»] scaffold0117 (1 HSPs)
scaffold0117 (285-372)||(42473-42560)
[»] scaffold0431 (1 HSPs)
scaffold0431 (117-180)||(5620-5685)
[»] scaffold0051 (1 HSPs)
scaffold0051 (285-367)||(31950-32031)
[»] scaffold0515 (2 HSPs)
scaffold0515 (295-372)||(4836-4913)
scaffold0515 (116-147)||(5051-5082)
[»] scaffold0306 (2 HSPs)
scaffold0306 (295-372)||(4836-4913)
scaffold0306 (116-147)||(5051-5082)
[»] scaffold0231 (2 HSPs)
scaffold0231 (112-180)||(17516-17584)
scaffold0231 (31-75)||(23710-23754)
[»] scaffold0394 (2 HSPs)
scaffold0394 (438-493)||(8477-8531)
scaffold0394 (109-179)||(7506-7575)
[»] scaffold0293 (1 HSPs)
scaffold0293 (285-372)||(19463-19550)
[»] scaffold0247 (1 HSPs)
scaffold0247 (117-180)||(1065-1128)
[»] scaffold0139 (3 HSPs)
scaffold0139 (22-77)||(40051-40106)
scaffold0139 (116-176)||(23527-23587)
scaffold0139 (109-180)||(40153-40226)
[»] scaffold0853 (1 HSPs)
scaffold0853 (117-171)||(2454-2508)
[»] scaffold0462 (1 HSPs)
scaffold0462 (247-369)||(11026-11148)
[»] scaffold0213 (2 HSPs)
scaffold0213 (22-80)||(19308-19366)
scaffold0213 (113-180)||(19196-19263)
[»] scaffold0017 (2 HSPs)
scaffold0017 (107-180)||(26716-26789)
scaffold0017 (53-179)||(23604-23730)
[»] scaffold0516 (2 HSPs)
scaffold0516 (116-180)||(5304-5368)
scaffold0516 (22-80)||(5102-5160)
[»] scaffold0256 (1 HSPs)
scaffold0256 (250-310)||(1971-2031)
[»] scaffold0003 (1 HSPs)
scaffold0003 (109-181)||(96386-96458)
[»] scaffold0505 (1 HSPs)
scaffold0505 (117-180)||(4926-4988)
[»] scaffold0203 (1 HSPs)
scaffold0203 (113-180)||(17936-18003)
[»] scaffold1256 (2 HSPs)
scaffold1256 (22-80)||(2094-2152)
scaffold1256 (116-180)||(2199-2263)
[»] scaffold0328 (1 HSPs)
scaffold0328 (113-158)||(18636-18681)
[»] scaffold0116 (1 HSPs)
scaffold0116 (26-78)||(46003-46055)
[»] scaffold0112 (1 HSPs)
scaffold0112 (109-165)||(2893-2949)
[»] scaffold0108 (1 HSPs)
scaffold0108 (107-179)||(6408-6480)
[»] scaffold0092 (1 HSPs)
scaffold0092 (57-179)||(38381-38503)
[»] scaffold1941 (1 HSPs)
scaffold1941 (112-147)||(160-195)
[»] scaffold0802 (1 HSPs)
scaffold0802 (112-147)||(4704-4739)
[»] scaffold0337 (1 HSPs)
scaffold0337 (57-147)||(3226-3317)
[»] scaffold0207 (1 HSPs)
scaffold0207 (112-147)||(13387-13422)
[»] scaffold0058 (3 HSPs)
scaffold0058 (438-493)||(60797-60851)
scaffold0058 (109-180)||(59648-59718)
scaffold0058 (284-350)||(39975-40041)
[»] scaffold0488 (1 HSPs)
scaffold0488 (31-81)||(12580-12630)
[»] scaffold0298 (1 HSPs)
scaffold0298 (128-181)||(373-426)
[»] scaffold1102 (1 HSPs)
scaffold1102 (103-179)||(1937-2012)
[»] scaffold0285 (1 HSPs)
scaffold0285 (107-147)||(19775-19815)
[»] scaffold0125 (3 HSPs)
scaffold0125 (445-493)||(24439-24486)
scaffold0125 (31-78)||(33612-33659)
scaffold0125 (445-493)||(360-407)
[»] scaffold0059 (1 HSPs)
scaffold0059 (107-147)||(49751-49791)
[»] scaffold0040 (2 HSPs)
scaffold0040 (112-164)||(106046-106098)
scaffold0040 (262-350)||(106303-106391)
[»] scaffold1434 (1 HSPs)
scaffold1434 (106-173)||(1348-1414)
[»] scaffold0628 (1 HSPs)
scaffold0628 (113-144)||(1054-1085)
[»] scaffold0334 (1 HSPs)
scaffold0334 (112-147)||(540-575)
[»] scaffold0241 (1 HSPs)
scaffold0241 (112-147)||(3204-3239)
[»] scaffold0113 (1 HSPs)
scaffold0113 (112-147)||(35512-35547)
[»] scaffold0100 (1 HSPs)
scaffold0100 (107-170)||(26624-26687)
[»] scaffold0077 (1 HSPs)
scaffold0077 (85-147)||(34361-34421)
[»] scaffold0071 (1 HSPs)
scaffold0071 (116-147)||(15294-15325)
[»] scaffold0037 (2 HSPs)
scaffold0037 (112-147)||(112961-112996)
scaffold0037 (116-147)||(117806-117837)
[»] scaffold1633 (1 HSPs)
scaffold1633 (117-147)||(1227-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (117-147)||(468-498)
[»] scaffold0956 (1 HSPs)
scaffold0956 (113-147)||(2577-2611)
[»] scaffold0601 (1 HSPs)
scaffold0601 (117-147)||(196-226)
[»] scaffold0230 (1 HSPs)
scaffold0230 (107-165)||(6675-6733)
[»] scaffold0151 (1 HSPs)
scaffold0151 (284-350)||(9918-9984)
[»] scaffold0064 (1 HSPs)
scaffold0064 (117-147)||(58768-58798)
[»] scaffold0036 (1 HSPs)
scaffold0036 (117-147)||(78185-78215)
[»] scaffold0032 (1 HSPs)
scaffold0032 (113-147)||(61844-61878)
[»] scaffold0023 (1 HSPs)
scaffold0023 (31-65)||(16649-16683)
[»] scaffold0019 (1 HSPs)
scaffold0019 (117-147)||(24131-24161)
[»] scaffold0001 (1 HSPs)
scaffold0001 (113-147)||(77709-77743)
[»] scaffold0716 (1 HSPs)
scaffold0716 (31-72)||(5590-5631)
[»] scaffold0546 (1 HSPs)
scaffold0546 (43-80)||(8021-8058)
[»] scaffold0109 (1 HSPs)
scaffold0109 (43-80)||(5249-5286)
[»] scaffold1276 (1 HSPs)
scaffold1276 (284-348)||(965-1029)
[»] scaffold0422 (1 HSPs)
scaffold0422 (284-348)||(3789-3853)
[»] scaffold0011 (1 HSPs)
scaffold0011 (107-147)||(33476-33516)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 12917211 - 12917370
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||| ||||||||||||||||||||     
T  12917211 aatacgtagaaactgcttttgggagaaaaagggaaaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaaga 12917310  T
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12917311 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 12917370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 3527068 - 3527221
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 127  Q
    ||||||||| ||| ||||||||||||||||||   ||| ||||||||| |||| | ||||||  |||||||| |||||||||||  ||||||||||||||    
T  3527068 tagaaactgtttttgggagaaaaagggagaaatgaagaagtcagagaatagaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaaggg 3527167  T
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  3527168 tgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaaca 3527221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 22841210 - 22841343
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  22841210 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaattcaaccaatctaatgtaagggtgggactagctttctctaa 22841308  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||| ||||| |||||||||||||||    
T  22841309 taatgggttgtataattctgaaaaagggtttaaca 22841343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 25202292 - 25202124
Alignment:
Q  12 agagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaa 110  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||| ||||||||||    
T  25202292 agagagtcagaatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtccgaattcaa 25202193  T
Q  111 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
      ||||||||||||||||||||||| | ||| ||||||||||||| ||| | ||| ||| |||||||||||    
T  25202192 taaatctaaggtaagggtgggactagc-ttcgctaataatgggtt-tataaatctgaaatagggtttaaca 25202124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 14641463 - 14641611
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 129  Q
    ||||||| || |||||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  14641463 aaactgcatttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtg 14641560  T
Q  130 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  14641561 ggattagctttctctaataatgggttgtataattctaaaaaagggtttaac 14641611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 45803257 - 45803395
Alignment:
Q  42 gggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 140  Q
    |||||||||||| ||||||||||| ||||||||| ||||| | ||||||  || ||||| ||||||||||||||||||| || |||||||||||| ||||    
T  45803257 gggagaaaaagg-agaaagtgagaagtcagagaaagagaagaggagcaaactt-tagagtccgaattcaaccaatctaaagttagggtgggactagcttt 45803354  T
Q  141 ctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  45803355 ctctaataatgggttgtataattctgaaaaagggtttaaca 45803395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 48043371 - 48043540
Alignment:
Q  11 cagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattca 109  Q
    ||||||| || ||||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||||| | ||||||| |||||||  |||||||||    
T  48043371 cagagagtcagaatacgtagaaactgcttttgggagaaaaagagaaaaagtgagaagtcagagaaagagaagaggagcaagcttgtagaatccgaattca 48043470  T
Q  110 accaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    | ||||||||||||||||||  |||| | |||||||||||||| || ||| ||| | ||| |||||||||||    
T  48043471 atcaatctaaggtaagggtgtaactagc-ttctctaataatggatt-tataattttgaaatagggtttaaca 48043540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 16979837 - 16979712
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||||||||||||||||||    
T  16979837 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttgatga 16979738  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  16979737 aattggggcttttggagtgaaaactg 16979712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 29907785 - 29907628
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 120  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29907785 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29907688  T
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29907687 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29907628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 29948951 - 29948794
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 120  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29948951 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29948854  T
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29948853 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29948794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 29998105 - 29997948
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 120  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29998105 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29998008  T
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29998007 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 54875474 - 54875538
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 54875538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 24548867 - 24549016
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcc---cgaattcaaccaatcta 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  |         ||||| ||   |||  ||| | || |||    
T  24548867 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaaagcg---------gtagaaccttgcga--tcatctaaccta 24548955  T
Q  119 aggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    | ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  24548956 aagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaa 24549016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 26054598 - 26054685
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  26054598 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactg 26054685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 14442237 - 14442163
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||    
T  14442237 tcaatcaatctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaaca 14442163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 371
Target Start/End: Complemental strand, 22652660 - 22652574
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaact 371  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  22652660 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaact 22652574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 2841501 - 2841570
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  2841501 caatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaaca 2841570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 6156767 - 6156710
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 169  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6156767 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 6156710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 6159461 - 6159393
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  6159461 aatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaaca 6159393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 14520503 - 14520435
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||    
T  14520503 caatctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaac 14520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 21845561 - 21845682
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||| | ||| ||  ||||| || || ||||    ||||||||||    
T  21845561 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagttagataagagaagaggagaaaacttgtaaagtccaaatt----caatctaagg 21845656  T
Q  122 taagggtgggactaactttctctaat 147  Q
    |||||||||||||||| |||| ||||    
T  21845657 taagggtgggactaaccttctttaat 21845682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 6805054 - 6805138
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||  ||||||||||||| |||||    
T  6805054 aagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttgg 6805138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 14152398 - 14152462
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaac 14152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 17208581 - 17208513
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  17208581 caatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaac 17208513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 17669698 - 17669762
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 17669762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 17684835 - 17684899
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaaca 17684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 15465983 - 15465896
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| | ||| |||||||||||||||||||| |||||| ||||||||||||    
T  15465983 gttcaggctgtagaataaacataggttgagtttcctatcaaatatgggatttgggttgatgaaattggggcttttagagtgaaaactg 15465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 371
Target Start/End: Complemental strand, 5224211 - 5224126
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaact 371  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| | ||||||||||||||||    
T  5224211 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattgg-ggttttggagtgaaaact 5224126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 24547253 - 24547188
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  24547253 ctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaaca 24547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 12917443 - 12917515
Alignment:
Q  250 agtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 322  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||| || || |||||||||||||| ||||    
T  12917443 agtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtaaaataatcataggtagagtttcctat 12917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 50755266 - 50755318
Alignment:
Q  129 gggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  50755266 gggactaactttctctaataatggattgtatgattctaaaaaggggtttaaca 50755318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 3160561 - 3160689
Alignment:
Q  52 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataat 150  Q
    |||||||||||||| |||||||||||||| | | | ||| |||||||   | ||||| ||||||||||||||||||||| ||||||| |||| |||| ||    
T  3160561 gggagaaagtgagaagtcagagaagagaagaagggaaagcttgtagaattctgaatttaaccaatctaaggtaagggtgagactaaccttctttaatcat 3160660  T
Q  151 gggttgtatgattctaaaaaagggtttaac 180  Q
    | | | ||| |||||||||| |||||||||    
T  3160661 gag-tatataattctaaaaatgggtttaac 3160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 5215704 - 5215636
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||||||| ||| | ||||||||||||||    
T  5215704 caatataaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaac 5215636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 12918472 - 12918526
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  12918472 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 12918526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 15566800 - 15566733
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||| |||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  15566800 aatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 15566733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 489
Target Start/End: Complemental strand, 25200914 - 25200864
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgat 489  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  25200914 agcaaaattaattgatgattt-gtagttggaattatgtgaagcattgttgat 25200864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 48630282 - 48630228
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  48630282 agcaaaattaattgatgattt-gtagttgaaattatgtgaagcattgttgatgatg 48630228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 16050980 - 16050915
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||  ||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaaca 16050915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 19568203 - 19568256
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  19568203 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19568256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 3528589 - 3528643
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||| ||||||||||||| ||||||| |||||    
T  3528589 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgttgatg 3528643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 13185952 - 13185917
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  13185952 caatctaaggtaagggtgggactaactttctctaat 13185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 40808053 - 40808018
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  40808053 caatctaaggtaagggtgggactaactttctctaat 40808018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 40812890 - 40812855
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  40812890 caatctaaggtaagggtgggactaactttctctaat 40812855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 44274475 - 44274440
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  44274475 caatctaaggtaagggtgggactaactttctctaat 44274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 43549818 - 43549884
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||||    
T  43549818 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatt 43549884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 55291764 - 55291830
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  |||||||||||||||||    
T  55291764 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatt 55291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 2247877 - 2247930
Alignment:
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  2247877 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 2247930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 5200240 - 5200273
Alignment:
Q  114 atctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||    
T  5200240 atctaaggtaagggtgggactaactttctctaat 5200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 10559030 - 10558981
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||| | |||||||||||||||||||||| || |||||||||||    
T  10559030 aaactgcttttgagagaaaaagggagaaagtgagaagtaagagaagagaa 10558981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 6003248 - 6003181
Alignment:
Q  106 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 174  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||| ||||||||    
T  6003248 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctgaaaaaggg 6003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 6468254 - 6468298
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 75  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  6468254 aaacggcttttgggagaaaaagggagaaagtgagaagtcagagaa 6468298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 10380075 - 10380031
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 75  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  10380075 aaactgtttttgggagaaaaagggagaaagtgagaagtcagagaa 10380031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 15026304 - 15026351
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  15026304 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 15026351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 10563765 - 10563730
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10563765 caatctaaggtaatggtgggactaactttctctaat 10563730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 15446867 - 15446898
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  15446867 ctaaggtaagggtgggactaactttctctaat 15446898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 33565144 - 33565109
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  33565144 caatctaaggtaagggtgtgactaactttctctaat 33565109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 35960923 - 35960958
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35960923 caatctaaggtaagggtgggattaactttctctaat 35960958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 322
Target Start/End: Original strand, 45803464 - 45803539
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 322  Q
    |||||||| ||||||||||||||||  ||| || || ||| |||||||||||| || ||||||| |||||| ||||    
T  45803464 aagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgagtttcctat 45803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 9510906 - 9510964
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| ||||||||||||||||||  ||||||||||||||||  |  |||||||||||||    
T  9510906 tcaatcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattct 9510964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 9518881 - 9518939
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| ||||||||||||||||||  ||||||||||||||||  |  |||||||||||||    
T  9518881 tcaatcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattct 9518939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 11563781 - 11563747
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||| |||||||||    
T  11563781 aatctaaggtaagggtgggactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 17045018 - 17044988
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaat 17044988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 17047178 - 17047148
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaat 17047148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 17518869 - 17518903
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||| |||||||||||||||||||||||||    
T  17518869 aatctaaggcaagggtgggactaactttctctaat 17518903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 17533731 - 17533765
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||| |||||||||||||||||||||||||    
T  17533731 aatctaaggcaagggtgggactaactttctctaat 17533765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 17541486 - 17541456
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaat 17541456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 22306583 - 22306613
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaat 22306613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 29907546 - 29907468
Alignment:
Q  262 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    ||||||||| |||| | | ||||||||  |||| |||| || |||||||||| ||| ||||||| ||||||||||||||    
T  29907546 gatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttggaatttgggt 29907468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 29948712 - 29948634
Alignment:
Q  262 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    ||||||||| |||| | | ||||||||  |||| |||| || |||||||||| ||| ||||||| ||||||||||||||    
T  29948712 gatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttggaatttgggt 29948634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 29997866 - 29997788
Alignment:
Q  262 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    ||||||||| |||| | | ||||||||  |||| |||| || |||||||||| ||| ||||||| ||||||||||||||    
T  29997866 gatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttggaatttgggt 29997788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 46823214 - 46823180
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgaga 65  Q
    |||||||||| ||||||||||||||||||||||||    
T  46823214 aaactgcttttgggagaaaaagggagaaagtgaga 46823180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 48631391 - 48631353
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  48631391 aaccaatctaaggtaagggtgggactaaccttctttaat 48631353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 48631493 - 48631435
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||  ||||  ||||||||||||||||||||||| ||  ||||||||||    
T  48631493 aatacgtagaaacaacttttaggagaaaaagggagaaagtgagaagttggagaagagaa 48631435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 49900786 - 49900752
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||| ||||||||||    
T  49900786 aatctaaggtaagggtgggactaattttctctaat 49900752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 50350981 - 50351043
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    ||||||||||||| || || |||||| |||||||||||| || ||||| |||||||| |||||    
T  50350981 tgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggtagatga 50351043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 24177735 - 24177784
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||| |||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattct 24177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 42417 - 42353
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  42417 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 42353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 6002059 - 6002012
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  6002059 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 6002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 13437128 - 13437072
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    |||||||||||||||| || ||||||| |||||| ||||||| |||||  |||||||    
T  13437128 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 13437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 13522475 - 13522559
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||||||| |||||| |||||||||  ||| || || |||||||||||||||| ||| ||||||   |||| ||||||| |||||    
T  13522475 aagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttgg 13522559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 41172371 - 41172399
Alignment:
Q  117 taaggtaagggtgggactaactttctcta 145  Q
    |||||||||||||||||||||||||||||    
T  41172371 taaggtaagggtgggactaactttctcta 41172399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 22610172 - 22610331
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| | || |||| |||||| | |||||||||||||||||||||    
T  22610172 aatacgtagaaaccgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggaacaagcttgtagggtccgaattcaaccaatctaagg 22610271  T
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  22610272 taagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaaca 22610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 20879619 - 20879463
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| |||||||||||||||||||||    
T  20879619 aatacgtagaaactacttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaaacttgtagagtccgaattcaaccaatctaagg 20879520  T
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    |||||||||||||||| |||| |||| ||  | | |||| ||||||||||||||||||    
T  20879519 taagggtgggactaaccttctttaatcataag-tatatggttctaaaaaagggtttaa 20879463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 23884309 - 23884159
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 127  Q
    ||||||||||||| ||||||||| |||||||||||| | |||||||||||||| | ||||||  |||||||| | ||||||| | |||||||||||||||    
T  23884309 tagaaactgcttttgggagaaaa-gggagaaagtgaaaagtcagagaagagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaaggg 23884211  T
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
     ||||||| |||||||||  ||||||||||||||||||||||| ||||||||||    
T  23884210 cgggactagctttctcta--aatgggttgtatgattctaaaaaggggtttaaca 23884159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 22484058 - 22483926
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  22484058 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaattcaaccaatctaaggtaagcg-gggactaactttctctaa 22483961  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||| ||||||| ||||| |||||||||||||||    
T  22483960 taatgagttgtataattcttaaaaagggtttaaca 22483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 22345286 - 22345152
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  22345286 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 22345187  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||  |||| ||||||||||    
T  22345186 taatgggttgtatgattccgaaaaggggtttaaca 22345152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 22356946 - 22356812
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  22356946 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 22356847  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||  |||| ||||||||||    
T  22356846 taatgggttgtatgattccgaaaaggggtttaaca 22356812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 22208405 - 22208258
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 129  Q
    |||||||||| ||||||||| |||||||||||||| |||| |||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  22208405 aaactgcttttgggagaaaa-gggagaaagtgagaagtcaaagaaagagaagaggagcaatctggtagagaccga--tcatctaatctaaggtaagggtg 22208309  T
Q  130 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  22208308 ggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22208258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 21399774 - 21399705
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21399774 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 21399705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 21794267 - 21794198
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21794267 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 21794198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 16198761 - 16198636
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  16198761 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 16198662  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  16198661 aattggggcttttggagtgaaaactg 16198636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 369
Target Start/End: Original strand, 25657641 - 25657763
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || || |||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  25657641 aagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 25657740  T
Q  347 aattggtgcttttggagtgaaaa 369  Q
    |||||| |||||| |||||||||    
T  25657741 aattggggcttttagagtgaaaa 25657763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 14397074 - 14397160
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  14397074 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgga-tttgggttgatgaaattggggcttttggagtgaaaactg 14397160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 12037291 - 12037395
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||||||||||||| | |||||| ||||||| ||||||||||| || |||||||||||  | ||||||| ||||| ||||||||||  ||    
T  12037291 aagagtagataatccgatgaattaggttaataattggtgtttaggttgtagaataatcataggtagagactcctatcaaatttgggatttgggttggaga 12037390  T
Q  347 aattg 351  Q
    |||||    
T  12037391 aattg 12037395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 18816290 - 18816358
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||    
T  18816290 caatataaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaac 18816358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 22483834 - 22483774
Alignment:
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaca 22483774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 369
Target Start/End: Complemental strand, 23479007 - 23478885
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||| | ||||||||||||||    
T  23479007 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttgatga 23478908  T
Q  347 aattggtgcttttggagtgaaaa 369  Q
    |||||| ||||| ||||||||||    
T  23478907 aattggggctttaggagtgaaaa 23478885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 18834474 - 18834422
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 169  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattctaaaa 18834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 36732411 - 36732475
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||| |||||||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaac 36732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 21514743 - 21514680
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaac 21514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 22258306 - 22258369
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||| |||| |||||||||||||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaac 22258369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 36306158 - 36305988
Alignment:
Q  20 ataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaa 105  Q
    |||||||||  ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||             ||||||  |||||||| ||||     
T  36306158 ataatacgtgcaaacttcttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccga- 36306060  T
Q  106 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
     ||| | ||||||||||||||||| ||||| |||||||||||||  |||||||||||||| ||||||| |||||    
T  36306059 -tcatctaatctaaggtaagggtgagactagctttctctaataa-cggttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 4380616 - 4380680
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4380680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 12577932 - 12577869
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaac 12577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 22532122 - 22532180
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  22532122 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 22536807 - 22536865
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  22536807 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22536865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 19880710 - 19880630
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| |||||||       |||||||||||||||||||| |||||||||||||||||||    
T  19880710 gttcaggctgtagaataaacataggttgagtttcctatcaa-------atttgggttgatgaaattggggcttttggagtgaaaactg 19880630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 20397500 - 20397540
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  20397500 tcaaccaatctaaggtaagggtgggattaactttctctaat 20397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 22708313 - 22708380
Alignment:
Q  106 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 174  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||||||||||||    
T  22708313 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctaaaaaaggg 22708380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 21678838 - 21678907
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21678838 aaccaatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21678907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 23885448 - 23885394
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  23885448 agcaaaattaattgatgattt-gtagtgggaattatgtgaagtattgttgatgatg 23885394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 20022036 - 20022070
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  20022036 aatctaaggtaagggtgggactaactttctctaat 20022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 17611210 - 17611259
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||| |||||||||||||| ||||||||| || |||||||||||    
T  17611210 aaactgcttttgggagaaaaagggaaaaagtgagaagtaagagaagagaa 17611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 17906848 - 17906897
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 17906897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 18023567 - 18023620
Alignment:
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  18023567 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 18023620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 21676494 - 21676561
Alignment:
Q  111 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21676494 ccaatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 368
Target Start/End: Complemental strand, 26454593 - 26454517
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaa 368  Q
    ||||||| ||||||| || ||||||| |||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  26454593 gttcaggctgtagaataaacataggttgagtttcctatcaa-------atttgggttgatgaaattggggcttttggagtgaaa 26454517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 38184923 - 38184976
Alignment:
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  38184923 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 38184976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 22310686 - 22310733
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||    
T  22310686 ttaattgatgattt-gtatttggaattatgtgaagcattgttgatgatg 22310733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 5761586 - 5761555
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaat 5761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 6101748 - 6101783
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6101748 caatctaaggtaaaggtgggactaactttctctaat 6101783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 17158962 - 17158993
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  17158962 ctaaggtaagggtgggactaactttctctaat 17158993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 19880875 - 19880844
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  19880875 ctaaggtaagggtgggactaactttctctaat 19880844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 22483705 - 22483630
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 322  Q
    |||||||| ||||| ||||||||||  ||| || || |||||||||||||||| || ||||||| |||||| ||||    
T  22483705 aagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctat 22483630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 23479135 - 23479104
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  23479135 ctaaggtaagggtgggactaactttctctaat 23479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 489
Target Start/End: Complemental strand, 23882827 - 23882777
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgat 489  Q
    ||||||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  23882827 agcaaaattaattgatgattt-gtagtgggaattatgtgaagtattgttgat 23882777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 23899982 - 23900017
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  23899982 caatctaaggtaagggtgtgactaactttctctaat 23900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 26454761 - 26454730
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  26454761 ctaaggtaagggtgggactaactttctctaat 26454730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 31722488 - 31722523
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31722488 caatctaagataagggtgggactaactttctctaat 31722523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 36727033 - 36727068
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  36727033 caatctaaggtaagggtgagactaactttctctaat 36727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 45469214 - 45469249
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  45469214 caatctaaggtaagggtgagactaactttctctaat 45469249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 20517028 - 20517066
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  20517028 aaccaatctaaggtaagggtgggactaaccttctttaat 20517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 21676590 - 21676654
Alignment:
Q  114 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21676590 atctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21676654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 8413911 - 8413975
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  8413911 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 8413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 18834573 - 18834541
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtga 63  Q
    |||||||||| ||||||||||||||||||||||    
T  18834573 aaactgcttttgggagaaaaagggagaaagtga 18834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 19882837 - 19882773
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  19882837 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 19882773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 22317901 - 22317941
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  22317901 tcaatcaatctaaggtaagggtgggactaaccttcactaat 22317941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 493
Target Start/End: Complemental strand, 22343849 - 22343817
Alignment:
Q  461 tagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||| |||||||||||||||||||||||||||    
T  22343849 tagttggaattatgtgaagcattgttgatgatg 22343817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 493
Target Start/End: Complemental strand, 22355509 - 22355477
Alignment:
Q  461 tagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||| |||||||||||||||||||||||||||    
T  22355509 tagttggaattatgtgaagcattgttgatgatg 22355477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 22474818 - 22474778
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  22474818 tcaatcaatctaaggtaagggtgggactaaccttctttaat 22474778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 36405122 - 36405162
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  36405122 tcaatcaatctaaggtaagggtgtgactaactttctttaat 36405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 34392915 - 34392756
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    |||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||||| ||||||||  |||||||| || ||||||||||||||||||    
T  34392915 aatacgtagaaactccttttgggagaaaaaaggagaaagtgagaagtcagagaagagaatatgagcaatcttgtagagtccaaattcaaccaatctaagg 34392816  T
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  34392815 taagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 34392756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 17901929 - 17902055
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  17901929 aagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatga 17902028  T
Q  347 aattggtgc-ttttggagtgaaaactg 372  Q
    |||||| || |||||||||||||||||    
T  17902029 aattggggctttttggagtgaaaactg 17902055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 370
Target Start/End: Complemental strand, 6834094 - 6833968
Alignment:
Q  247 aagagtagctaatccg---atgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttga 343  Q
    |||||||| |||||||   ||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| |||| ||||||    
T  6834094 aagagtaggtaatccgatgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttggttga 6833995  T
Q  344 tgaaattggtgcttttggagtgaaaac 370  Q
    ||||||||| ||||||| |||||||||    
T  6833994 tgaaattggggcttttgtagtgaaaac 6833968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 8306743 - 8306594
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 129  Q
    |||||||||| | |||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||| |||    
T  8306743 aaactgcttttgagagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagagtg 8306646  T
Q  130 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  8306645 ggactagctttctctaataatgggttgtataattctaaaaaggggtttaaca 8306594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 17901719 - 17901858
Alignment:
Q  42 gggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 140  Q
    |||||||||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||| | ||| | | ||||||||||||||| ||||| ||||    
T  17901719 gggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgagactagcttt 17901817  T
Q  141 ctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  17901818 ctctaataatgggttgtataattctgaaaaagggtttaaca 17901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 21239170 - 21239271
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||| ||||||||||| |||||||||| |||||||| || |||||||||||||||||||||| ||| | ||||||||||||||    
T  21239170 aagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttaggatttgggttgatga 21239269  T
Q  347 aa 348  Q
    ||    
T  21239270 aa 21239271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 46197872 - 46197997
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  46197872 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 46197971  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  46197972 aattggggcttttggagtgaaaactg 46197997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 35895246 - 35895087
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 120  Q
    |||||||  |||||| ||| ||||||||| ||||||||| |||| ||||||||| ||||| | ||||||| ||||||||   ||| ||| | ||||||||    
T  35895246 aatacgtgaaaactgtttttgggagaaaa-gggagaaagagagaagtcagagaaagagaagaggagcaagcttgtagagtttgaaatcatctaatctaag 35895148  T
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||| ||||||| |||||||    
T  35895147 gtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaaca 35895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 39061437 - 39061310
Alignment:
Q  52 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatg 151  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||||| |||||||||||| ||||||||||| |||| |||| |||    
T  39061437 gggagaaagtgagaagtcagagaagagaagatgagcaaacttgtagagtctgaattcaacctatctaaggtaagagtgggactaaccttctgtaatcatg 39061338  T
Q  152 ggttgtatgattctaaaaaagggtttaac 180  Q
     | | ||| ||||| ||||| ||||||||    
T  39061337 ag-tatataattctgaaaaaaggtttaac 39061310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 8306529 - 8306426
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||| ||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  8306529 aagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 8306430  T
Q  347 aatt 350  Q
    ||||    
T  8306429 aatt 8306426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 45499598 - 45499530
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  45499598 aatctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaaca 45499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 50544929 - 50544861
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  50544929 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 50544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 7052140 - 7052243
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||| || || |||||||  ||||| ||||||  ||||| |||||||| |||||    
T  7052140 aagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatga 7052239  T
Q  347 aatt 350  Q
    ||||    
T  7052240 aatt 7052243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 22145666 - 22145729
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaac 22145729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 38056668 - 38056735
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38056668 aatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaac 38056735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 20588696 - 20588624
Alignment:
Q  111 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaa--aaaagggtttaaca 181  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||    
T  20588696 ccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaaca 20588624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 20593234 - 20593162
Alignment:
Q  111 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaa--aaaagggtttaaca 181  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||    
T  20593234 ccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaaca 20593162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 50001401 - 50001276
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || |||| || |||||| ||||||| ||| | ||||||||||||||    
T  50001401 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttgatga 50001302  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  50001301 aattggggcttttggagtgaaaactg 50001276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 24723602 - 24723690
Alignment:
Q  262 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| ||||||||  ||||||||    
T  24723602 gatgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaatt 24723690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 635001 - 635064
Alignment:
Q  114 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 177  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||    
T  635001 atctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 28476730 - 28476797
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||||||||||    
T  28476730 aatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaac 28476797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 6834297 - 6834164
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||| ||||| ||||| | ||||||| || ||||| ||| | ||| | | ||||||| |||||||  |||| ||||||||||    
T  6834297 aaaagggagaaagtgagaagtcggagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggcaagggtgatactagctttctctaa 6834199  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||| ||||||| ||||| |||||||||||||||    
T  6834198 taatgagttgtataattctgaaaaagggtttaaca 6834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 21187968 - 21188054
Alignment:
Q  52 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtag-agcccgaattcaaccaatctaaggtaagggtgggactaac 137  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||| |  | ||||| |||||||||||||||||||||||||||||    
T  21187968 gggagaaagtgagaagtcagagaagagaagaagagaaagtttgtagaattcagaatttaaccaatctaaggtaagggtgggactaac 21188054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 29763805 - 29763884
Alignment:
Q  293 tgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| || |||| || |||||| ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  29763805 tgtagaataaacataagttgagtttcctatcaaatttgggatttgggtggatgaaattggggcttttggagtgaaaactg 29763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 12710923 - 12710857
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    |||||||||||| | |||||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  12710923 aatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaa 12710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 28476627 - 28476681
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaag 76  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  28476627 aatatgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaag 28476681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 21243864 - 21243933
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagtt 316  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||||||||||| || |||||| ||||||    
T  21243864 aagagtagataatccgatgaattaggttaataattggtgttcaggttgtagaataatcataggcagagtt 21243933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 7703184 - 7703140
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatg 151  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  7703184 tcaaccaatctaaggtaagggtgggactagctttctctaataatg 7703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 24719514 - 24719573
Alignment:
Q  120 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  24719514 ggtaagggtgg-actagctttctctaataatgggttgtataattctgaaaaagggtttaac 24719573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 21168995 - 21168933
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 169  Q
    |||||||||||||||||||||||| | ||||||||||||||  | |||||||| |||||||||    
T  21168995 tcaaccaatctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaa 21168933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 24723341 - 24723399
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  24723341 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 24723399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 438 - 492
Target Start/End: Complemental strand, 34391829 - 34391776
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgat 492  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  34391829 agcaaaattaattgatgattt-gtagttggaaatatgtgaagcattgttgatgat 34391776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 7051917 - 7051970
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  7051917 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 7051970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 51336532 - 51336467
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 51336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 8275988 - 8276052
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||| ||||| |||| |||||||||| || |||| ||||| ||||||||||||||    
T  8275988 ctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaac 8276052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 16401963 - 16401901
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||| |||||||||||    
T  16401963 taaggtaagggtgggactaac-ttctctaataatgggtt-tataattctgaaatagggtttaaca 16401901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 22145798 - 22145870
Alignment:
Q  249 gagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttcta 321  Q
    |||||| |||||| ||||||||| ||||||| || |||||| ||||||||  || ||||||||||||||||||    
T  22145798 gagtaggtaatccaatgaattaaagtaataattgatgttcaagttgtagattaatcataggtagagttttcta 22145870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 12711027 - 12710968
Alignment:
Q  22 aatacgtagaaa-ctgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||| ||||||| |||||||||| || |||||||||| ||||||||||||||    
T  12711027 aatacgtagaaaactgctttagggagaaaaatggtgaaagtgagaagtcagagaagagaa 12710968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 23194675 - 23194741
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||| ||||||| |||||||||    
T  23194675 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaatt 23194741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 372
Target Start/End: Complemental strand, 35894064 - 35894010
Alignment:
Q  318 tctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||| || ||||| |||||||||||||||||||  |||||||||||||||||||    
T  35894064 tctataaaatttgggatttgggttgatgaaattgaggcttttggagtgaaaactg 35894010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 35895015 - 35894949
Alignment:
Q  256 taatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 322  Q
    |||||||||||| ||||||||||| |||||||||||| || ||| || |||| | ||||||||||||    
T  35895015 taatccgatgaagtaaggtaataattggtgttcaggtggtggaataatcatatgaagagttttctat 35894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 12327742 - 12327807
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||| |||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 12327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 21239044 - 21239097
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||| |||||||||||||||||||||||  |  |||||||||||||    
T  21239044 caatctaaggtatgggtgggactaactttctctaattctaagttgtatgattct 21239097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 297245 - 297181
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  297245 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 297181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 20846338 - 20846382
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 75  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||    
T  20846338 aaactgcttttgggagaaaaagggaaaaagtgagaagtcagagaa 20846382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 24007224 - 24007287
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||| |||||||| ||||| | |||||| ||||| ||||| ||||||||    
T  24007224 ctaaggtaagggtgggactagctttctctgataat-gattgtataattctgaaaaaaggtttaac 24007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 28193561 - 28193605
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 75  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  28193561 aaactgcttttgggagaaaaagtgagaaagtgagaagtcagagaa 28193605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 4595848 - 4595883
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  4595848 caatctaaggtaagggtgagactaactttctctaat 4595883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 13302959 - 13302924
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  13302959 caatctaaggtaagggtgagactaactttctctaat 13302924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 29763631 - 29763662
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  29763631 ctaaggtaagggtgggactaactttctctaat 29763662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 42913106 - 42913071
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  42913106 caatctaaggtaagggtgagactaactttctctaat 42913071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 46197744 - 46197775
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  46197744 ctaaggtaagggtgggactaactttctctaat 46197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 137
Target Start/End: Original strand, 7320584 - 7320614
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaac 137  Q
    |||||||||||||||||||||||||||||||    
T  7320584 tcaaccaatctaaggtaagggtgggactaac 7320614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 16058310 - 16058344
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||| ||||||||||    
T  16058310 aatctaaggtaagggtgggactaaatttctctaat 16058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 19676763 - 19676733
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaat 19676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 20708048 - 20708121
Alignment:
Q  106 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| ||||||||||||||||||||||||||| |||| |||  ||| ||| ||| ||||| |||||||| |||||    
T  20708048 ttcatccaatctaaggtaagggtgggactaaccttctttaa-catgagttctataattctgaaaaaggggttaac 20708121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 21046049 - 21046079
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaat 21046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 22130188 - 22130254
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||| ||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||||    
T  22130188 tgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatt 22130254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 38056589 - 38056623
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgaga 65  Q
    |||||||||| ||||||||||||||||||||||||    
T  38056589 aaactgcttttgggagaaaaagggagaaagtgaga 38056623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 51324566 - 51324508
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| |||||||||||||||||| ||||||||||| |||||  |  |||||||||||||    
T  51324566 tcaatcaatctaaggtaagggtgagactaactttccctaattctaagttgtatgattct 51324508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 14237582 - 14237619
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||||||| || |||||||||||    
T  14237582 ggagaaaaagggagaaagtgagaagtaagagaagagaa 14237619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 372
Target Start/End: Original strand, 21188164 - 21188284
Alignment:
Q  251 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||| |||||| |||||||||  ||| || || |||||||||||||||| ||  ||| |||  |||| ||||||| ||||| |||||||| | || ||||    
T  21188164 gtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtagttgtaatt 21188263  T
Q  351 ggtgcttttggagtgaaaactg 372  Q
    || | |||||| ||||||||||    
T  21188264 ggggtttttgg-gtgaaaactg 21188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 21243688 - 21243788
Alignment:
Q  48 aaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaa-ggtaagggtgggactaactttctcta 145  Q
    |||||||||||||||||| ||||||| ||||||| | ||||||| || ||||| ||| | ||| | ||||||| |||||||||| ||||||| |||| ||    
T  21243688 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctaatctaagggtaagggtgagactaaccttcttta 21243786  T
Q  146 at 147  Q
    ||    
T  21243787 at 21243788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 46560203 - 46560166
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||||||| || |||||||||||    
T  46560203 ggagaaaaagggagaaagtgagaagtaagagaagagaa 46560166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 6833018 - 6832971
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||||||    
T  6833018 ttaattgatgattta-tagttggaattatgtgaaccattgttgatgatg 6832971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 12709537 - 12709490
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||  || || |||||||||||||||||||||||||||    
T  12709537 ttaattgatgattta-taattggaattatgtgaagcattgttgatgatg 12709490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 20709262 - 20709309
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  20709262 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 20709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 21190538 - 21190581
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgat 489  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||    
T  21190538 ttaattgatgattt-gtagttggaattatgtgaagcattattgat 21190581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 35091 - 35250
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||||||||| | ||||||| |||||||| |||||||||||||||||||||    
T  35091 aatacgtagtaaccgcttttgggagaaaaagggagaaaatgagaagttagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaagg 35190  T
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  35191 taagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaaca 35250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 35652 - 35716
Alignment:
Q  286 ttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||| || |||||||  ||||| ||||||| |||||||||||||| ||| |||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagataaaatt 35716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 38299905 - 38299738
Alignment:
Q  12 agagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaac 111  Q
    |||||| ||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||| | ||| ||| |    
T  38299905 agagagccataatacgtagaaacgacttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtctgaaatcatc 38299806  T
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  38299805 taatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 36300536 - 36300705
Alignment:
Q  12 agagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaac 111  Q
    ||||| ||||||||||||||||||||||| ||  || |||| |||||||||||| |||||||||||||| | ||||||  |||||||  ||||||||||     
T  36300536 agagatacataatacgtagaaactgcttttggtggagaaagtgagaaagtgagaagtcagagaagagaagaggagcaaacttgtagaatccgaattcaat 36300635  T
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  36300636 caatctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 36300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 247 - 369
Target Start/End: Complemental strand, 19282971 - 19282849
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||| ||||||||||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||    
T  19282971 aagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctatcaaatttggaatttggattgatga 19282872  T
Q  347 aattggtgcttttggagtgaaaa 369  Q
    |||||| ||||||||||||||||    
T  19282871 aattggggcttttggagtgaaaa 19282849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 13315208 - 13315333
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||| || ||||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  13315208 aagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatga 13315307  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| | |||||||||||||||||    
T  13315308 aattggggtttttggagtgaaaactg 13315333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 13315012 - 13315146
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||| ||||| ||||||||| ||||| | ||||||| |||||||| | ||| | | | ||||||||||||||||| ||||| ||||||||||    
T  13315012 aaaagggagaaaatgagaagtcagagaaagagaataggagcaagcttgtagagtctgaaataatctaatctaaggtaagggtgagactatctttctctaa 13315111  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||| |||| ||||||||||    
T  13315112 taatgggttgtatgattctgaaaaggggtttaaca 13315146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 13744440 - 13744574
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||| ||||| || |||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  13744440 aaaagggagaaattgagaagttagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 13744539  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||| |||||||||||||| ||||||||||    
T  13744540 taatgggttttatgattctaaaaaggggtttaaca 13744574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 18570768 - 18570635
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    ||||||| |||||||||| || |||||| ||||| | | ||||| || ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18570768 aaaagggggaaagtgagaagttagagaaagagaagaggggcaagctt-tagagtccgaattcaaccaatctaaggtaagggtgagactagctttctctaa 18570670  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||| ||||||| ||| ||||||||||    
T  18570669 taatgggttgtaagattctagaaaggggtttaaca 18570635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 47975018 - 47975121
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||||||||| || ||||| |  ||||||||||||| |||||||||||||| |||||    
T  47975018 aagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatga 47975117  T
Q  347 aatt 350  Q
    ||||    
T  47975118 aatt 47975121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 15700666 - 15700799
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| || ||||||||||| | ||||||| |||||||| | | | |||   |||||||||||||| ||  |||| |||||||||||    
T  15700666 aaaagggagaaagtgagaagttagagaagagaagaggagcaagattgtagagtcagtaatcatataatctaaggtaaggatgatactagctttctctaat 15700765  T
Q  148 aatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||| ||||||||| ||||||||||    
T  15700766 aatgggttgtatggttctaaaaaggggtttaaca 15700799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 58409 - 58477
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  58409 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 58477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 8488093 - 8488157
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 8513752 - 8513816
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 33556097 - 33556169
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33556097 aaccaatctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 33556169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 8930700 - 8930829
Alignment:
Q  52 gggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 150  Q
    |||||||||||||| |||| |||| ||||| | ||||||| || ||| | ||| | ||| | |||||||||||||||||||||||  |||||||||||||    
T  8930700 gggagaaagtgagaagtcaaagaaagagaagaggagcaagctt-tagcgtccggaatcatctaatctaaggtaagggtgggactacatttctctaataat 8930798  T
Q  151 gggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||| ||||||||||    
T  8930799 gggttgtatgattctaaaaaggggtttaaca 8930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 12754792 - 12754895
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| |||||||||| ||||||| ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  12754792 aagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 12754891  T
Q  347 aatt 350  Q
    ||||    
T  12754892 aatt 12754895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 16550129 - 16550254
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||||||||||| ||||| ||||||||||||||    
T  16550129 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatga 16550228  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||  ||||||||    
T  16550229 aattggggcttttggaaagaaaactg 16550254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 16615533 - 16615408
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||||||||||| ||||| ||||||||||||||    
T  16615533 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatga 16615434  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||  ||||||||    
T  16615433 aattggggcttttggaaagaaaactg 16615408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 32160327 - 32160452
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||  |||||| |||||||    
T  32160327 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttggattgatga 32160426  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  32160427 aattggggcttttggagtgaaaactg 32160452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 708424 - 708492
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  708424 caatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 12127080 - 12127193
Alignment:
Q  33 actgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggg 131  Q
    |||||||| |||||||||||| ||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||||    
T  12127080 actgcttttgggagaaaaaggaagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtggg 12127177  T
Q  132 actaactttctctaat 147  Q
    ||||||||||||||||    
T  12127178 actaactttctctaat 12127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 15575644 - 15575712
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  15575644 caatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 15575712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 1856564 - 1856651
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  1856564 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtaaaaactg 1856651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 13917736 - 13917823
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||    
T  13917736 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatctgggttgatgaaattggggcttttggagtgaaaactg 13917823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 16250219 - 16250286
Alignment:
Q  114 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaaca 16250286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 15720841 - 15720767
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||| |||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  15720841 tcaatcaatttaaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaaca 15720767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 20252177 - 20252246
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  20252177 caatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaaca 20252246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 38295527 - 38295434
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||| ||||||| || |||||||||||||| ||||  | ||||| ||||||||    
T  38295527 aagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttgggatttgggt 38295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 47095514 - 47095441
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||    
T  47095514 tcaatcaatctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaac 47095441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 43276744 - 43276797
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaa 43276797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 25943319 - 25943255
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || | |||| ||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaaca 25943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 43745709 - 43745645
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||| | ||||||||||||||    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaac 43745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 18874660 - 18874719
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 171  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  18874660 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaa 18874719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 19195667 - 19195601
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||  |||||||||||||    
T  19195667 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattct-gaaaagggtttaac 19195601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 25926463 - 25926550
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || |||||||  ||||| |||| || ||||| |||||||||||||||||||| || ||||||||||||||||    
T  25926463 gttcaggctgtagaataaacataggttcagtttcctataaaatttgggatttgggttgatgaaattggggcatttggagtgaaaactg 25926550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 36301872 - 36301926
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36301872 agcaaaattaattgatgattt-gtagttagaattatgtgaagtattgttgatgatg 36301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 19283108 - 19283051
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 174  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 15700887 - 15700947
Alignment:
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaaca 15700947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 48212726 - 48212793
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa--gggtttaaca 181  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||  ||||||||||    
T  48212726 ctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaaca 48212793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 37538170 - 37538116
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  37538170 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 37538116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 3287801 - 3287743
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 170  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||    
T  3287801 caatctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 44374968 - 44374865
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 141  Q
    |||||||||| |||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||||||| || ||||||||    
T  44374968 ggagaaaaagagagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtgagagtaactttc 44374871  T
Q  142 tctaat 147  Q
    ||||||    
T  44374870 tctaat 44374865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 44383833 - 44383730
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 141  Q
    |||||||||| |||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||||||| || ||||||||    
T  44383833 ggagaaaaagagagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtgagagtaactttc 44383736  T
Q  142 tctaat 147  Q
    ||||||    
T  44383735 tctaat 44383730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 491
Target Start/End: Complemental strand, 38294249 - 38294197
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatga 491  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  38294249 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatga 38294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 4690662 - 4690726
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||| ||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4690726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 16463196 - 16463097
Alignment:
Q  42 gggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 140  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||| || ||||| ||| | ||| | | ||||||||||||||| | ||||||||    
T  16463196 gggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgcggctaacttt 16463098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 24269937 - 24269977
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  24269937 tcaaccaatctaaggtaagggtgggattaactttctctaat 24269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 33059395 - 33059348
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  33059395 ttaattgatgattt-gtagttggaattatgtgaagcattgttgatgatg 33059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 37539570 - 37539470
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    ||||| |||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||| ||||||||||||||||| |||| |||    
T  37539570 aaaagagagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataa 37539471  T
Q  147 t 147  Q
    |    
T  37539470 t 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 48274409 - 48274357
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaa 299  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| |||||||||    
T  48274409 aagagtagataatctgatgaattaaagtaataagtggtgttcatgttgtagaa 48274357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 20586409 - 20586374
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  20586409 caatctaaggtaagggtgggactaactttctctaat 20586374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 48807320 - 48807355
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  48807320 caatctaaggtaagggtgggactaactttctctaat 48807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 4325985 - 4325919
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||||    
T  4325985 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaatt 4325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 14105590 - 14105656
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  |||||||||||||||||    
T  14105590 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatt 14105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 14415607 - 14415673
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  |||||||||||||||||    
T  14415607 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatt 14415673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 19195752 - 19195714
Alignment:
Q  42 gggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19195752 gggagaaaaagggagaaagtgagaagtcagagaagagaa 19195714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 708663 - 708732
Alignment:
Q  262 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||| ||||||||||||| ||||||| ||||||||||| || |||||||  ||||| ||||||| |||||    
T  708663 gatggattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgg 708732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 29052347 - 29052427
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| |||||||       ||||||||||||||||||||  ||||||||||||||||||    
T  29052347 gttcaggctgtagaataaacataggttgagtttcctatcaa-------atttgggttgatgaaattgggacttttggagtgaaaactg 29052427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 8851120 - 8851189
Alignment:
Q  76 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  8851120 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgggactaactttctctaat 8851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 11314302 - 11314349
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  11314302 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 11314349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 20214203 - 20214151
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    ||||||||||||||||||||||||||||||| |||  || ||||||| |||||    
T  20214203 aatctaaggtaagggtgggactaactttctcaaattctgagttgtataattct 20214151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 37539334 - 37539270
Alignment:
Q  286 ttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||| || | |||||  ||||| ||||||| |||||||||||||| |||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaatt 37539270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 4071873 - 4071842
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  4071873 ctaaggtaagggtgggactaactttctctaat 4071842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 12754611 - 12754642
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaat 12754642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 14218890 - 14218925
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  14218890 caatctaaggtaagggtgagactaactttctctaat 14218925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 29052181 - 29052212
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  29052181 ctaaggtaagggtgggactaactttctctaat 29052212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 33557329 - 33557383
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||  ||| || |||||||||||||||||| ||||||||    
T  33557329 agcaaaattaattgatgattg-gtatttggaattatgtgaagcattgctgatgatg 33557383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 35771440 - 35771471
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaat 35771471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 12372326 - 12372296
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaat 12372296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 12465260 - 12465290
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaat 12465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 13147472 - 13147502
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  13147472 taaggtaagggtgggactaactttctctaat 13147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 16078382 - 16078352
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaat 16078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 44190379 - 44190445
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| ||||||| | ||| |||||||| |||||||||    
T  44190379 tgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagatgaaatt 44190445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 831861 - 831914
Alignment:
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||  |||||||||  ||||||||||  |||||||||||||||||||||    
T  831861 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaaca 831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 1197041 - 1197094
Alignment:
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||  |||||||||  ||||||||||  |||||||||||||||||||||    
T  1197041 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaaca 1197094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 47974819 - 47974868
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 47974868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 12322891 - 12322960
Alignment:
Q  76 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||| ||||||  |||||||| ||||  ||| | ||| |||||||||||||| ||||||||||||||||    
T  12322891 gagaaaaggagcaatcttgtagagtccga--tcatctaatttaaggtaagggtggaactaactttctctaat 12322960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 15095627 - 15095667
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  15095627 tcaatcaatctaaggtaagggtgggactaaccttcactaat 15095667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 21660130 - 21660083
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  21660130 ttaattgatgattt-gtagttcgacttatgtgaagcattgttaatgatg 21660083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 33002205 - 33002157
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||| ||||||||||||||||||  |  |||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagttgtatgattct 33002157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 33060504 - 33060460
Alignment:
Q  103 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  33060504 gaattgaacaaatctaaggtaagggtgggactaaccttctttaat 33060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 42565996 - 42566052
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    |||||||||||||||| ||| |||||||  |||| ||||||| |||| |||||||||    
T  42565996 tgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgaaatttgggt 42566052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 9622630 - 9622477
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 127  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||||||| | ||||||  |||||||| | |||||||| ||||||||||||||||    
T  9622630 tagaaactgcttttgggagaaaaagggagaaagtgagaagttagagaagagaagaggagcaaacttgtagagtctgaattcaatcaatctaaggtaaggg 9622531  T
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  9622530 tgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaaca 9622477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 10273525 - 10273371
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagg 126  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||| | ||||||| |||||||| | ||| ||  | ||||||||||||||    
T  10273525 tagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagg 10273426  T
Q  127 gtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  10273425 gtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataaca 10273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 55583322 - 55583184
Alignment:
Q  48 aaaagggagaaagtgagaggtca-----gagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttct 142  Q
    |||||||||||||||||| ||||     |||||||||| | ||||||  |||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  55583322 aaaagggagaaagtgagaagtcaaagaagagaagagaagaggagcaaacttgtagagtccgaattcaacctatctaaggtaagggtgggactagctttct 55583223  T
Q  143 ctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  55583222 ctaataatgggttgtatgattataaaaaggggtttaaca 55583184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 13165279 - 13165154
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||| ||||||||| ||| ||||||||| || ||||| ||||| |||||||||||||| | ||||||  |||||||| || ||||||||||||||||||    
T  13165279 aatacatagaaactgtttttgggagaaaagggaagaaattgagaagtcagagaagagaagaggagcaaacttgtagagtccaaattcaaccaatctaagg 13165180  T
Q  122 taagggtgggactaactttctctaat 147  Q
    |||||||||||||||| |||| ||||    
T  13165179 taagggtgggactaaccttctttaat 13165154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 247 - 369
Target Start/End: Original strand, 10694372 - 10694494
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  10694372 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 10694471  T
Q  347 aattggtgcttttggagtgaaaa 369  Q
    |||||| ||||||||||||||||    
T  10694472 aattggggcttttggagtgaaaa 10694494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 16296796 - 16296693
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||| || |||||||  ||||| ||||||| ||||| |||||||| ||| |    
T  16296796 aagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatta 16296697  T
Q  347 aatt 350  Q
    ||||    
T  16296696 aatt 16296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 25514010 - 25513839
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaatt 107  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||             ||||||  |||||||| | ||  |    
T  25514010 aatacgtagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctga--t 25513913  T
Q  108 caaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    || | |||||||||||| |||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  25513912 catctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaaca 25513839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 35660812 - 35660710
Alignment:
Q  248 agagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaa 347  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || |||| ||  ||||| ||||||| ||||| |||||||| ||||||    
T  35660812 agagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaa 35660713  T
Q  348 att 350  Q
    |||    
T  35660712 att 35660710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 14631192 - 14631124
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  14631192 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 14631124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 16296995 - 16296927
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  16296995 caatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaac 16296927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 14549575 - 14549472
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||  ||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||  ||||| ||||||| ||||| |||||||| |||||    
T  14549575 aagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatga 14549476  T
Q  347 aatt 350  Q
    ||||    
T  14549475 aatt 14549472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 15008855 - 15008768
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| |||| || ||||| |||||||||||||||||||| |||||||||||||||||||    
T  15008855 gttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactg 15008768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 10908176 - 10908260
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaa 369  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||||    
T  10908176 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttgatgaaattggggcttttggagtgaaaa 10908260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 9639066 - 9638999
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| | ||||| ||||||||||||||    
T  9639066 aatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaac 9638999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 19434786 - 19434889
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| |||||||||| | ||||| ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| |||| ||| |||||    
T  19434786 aagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatga 19434885  T
Q  347 aatt 350  Q
    ||||    
T  19434886 aatt 19434889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 33187000 - 33186892
Alignment:
Q  70 agagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 169  Q
    ||||||||||  | |||||| ||||||||| ||||  ||| | ||| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||    
T  33187000 agagaagagaggaggagcaattttgtagagtccga--tcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T
Q  170 aagggtttaac 180  Q
    |||||||||||    
T  33186902 aagggtttaac 33186892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 12424290 - 12424355
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattct--aaaaaagggtttaac 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 12424355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 13847254 - 13847193
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 177  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  13847254 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 40620457 - 40620332
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  |||||||  |||| | || ||||||| |||||| || |||| ||||| ||||||||||||||    
T  40620457 aagagtaggtaattcaatgaattaacataagaattgaagttcaggccgtaggataaacataggttgagtttcctctcaaatttgggatttgggttgatga 40620358  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  40620357 aattggggcttttggagtgaaaactg 40620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 15239811 - 15239879
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||| ||||| |||||||||||||||  |||||| | ||| ||||||||||||||    
T  15239811 caatctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaac 15239879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 26446260 - 26446197
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    |||| |||||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||||||    
T  26446260 ctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaa 26446197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 19434554 - 19434607
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  19434554 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19434607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 35661002 - 35660945
Alignment:
Q  123 aagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 35660945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 493
Target Start/End: Complemental strand, 9621406 - 9621355
Alignment:
Q  441 aaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  9621406 aaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 9621355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 15191329 - 15191285
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 75  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  15191329 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaa 15191285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 10282953 - 10282899
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||    
T  10282953 agcaaaattaattgatgattt-gtagtttgaattatgtgaagtattgctgatgatg 10282899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 15115279 - 15115244
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  15115279 caatctaaggtaagggtgggactaactttctctaat 15115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 18463139 - 18463014
Alignment:
Q  54 gagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgg 152  Q
    |||||||||||| ||||||||| |||| | | | ||| ||||||||    ||||| |||||||||||||||| |||||||||||| |||| |||| |||     
T  18463139 gagaaagtgagaagtcagagaaaagaagaagggaaagcttgtagagttgagaatttaaccaatctaaggtaaaggtgggactaaccttctttaatcatga 18463040  T
Q  153 gttgtatgattctaaaaaagggtttaa 179  Q
    | | ||| ||||| |||||||||||||    
T  18463039 g-tatataattctgaaaaagggtttaa 18463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 2424386 - 2424449
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    |||||||||||||| |||||||||||||||||  |  ||||||| ||| | |||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaa 2424449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 9924211 - 9924176
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  9924211 caatctaaggtaagggtgagactaactttctctaat 9924176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 14549817 - 14549782
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  14549817 caatctaaggtaagggtgagactaactttctctaat 14549782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 15009016 - 15008985
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  15009016 ctaaggtaagggtgggactaactttctctaat 15008985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 21062694 - 21062663
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  21062694 ctaaggtaagggtgggactaactttctctaat 21062663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 37019727 - 37019692
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  37019727 caatctaaggtaagggtgtgactaactttctctaat 37019692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 11425995 - 11425965
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaat 11425965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 14477697 - 14477624
Alignment:
Q  103 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 177  Q
    ||||| |||||||||||||||||||||| |||||| |||| |||| ||| | | ||| ||||| |||||||||||    
T  14477697 gaatttaaccaatctaaggtaagggtggcactaaccttctttaatcatgag-tatataattctgaaaaagggttt 14477624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 15747787 - 15747837
Alignment:
Q  131 gactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||  ||| ||||||| ||||| |||||||||||||||    
T  15747787 gactaactttctctaaagatgagttgtataattctgaaaaagggtttaaca 15747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 25091705 - 25091675
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaat 25091675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 35811376 - 35811406
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaat 35811406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 40230362 - 40230328
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||| ||||    
T  40230362 aatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 53630474 - 53630504
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaat 53630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 12623378 - 12623338
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  12623378 tcaatcaatctaaggtaagggtgggactaaccttctttaat 12623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 14476567 - 14476524
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgat 489  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||    
T  14476567 ttaattgatgattt-gtagttggaattatgtgacgcattgttgat 14476524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 19022400 - 19022364
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataa 149  Q
    |||||||||||| |||| |||||||||||||||||||    
T  19022400 aatctaaggtaaaggtgagactaactttctctaataa 19022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 28386133 - 28386069
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  28386133 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 28386069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 68637 - 68790
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 127  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||   || ||| |||||||||  ||||||||| ||||||||||||||||    
T  68637 tagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaaagaagtggaacaaatttgtagagttcgaattcaatcaatctaaggtaaggg 68736  T
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  68737 tgggactacctttctctaataatgggttatatgattctaaaaacgggtttaaca 68790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 5e-48; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 20313424 - 20313265
Alignment:
Q  20 ataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaa 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| | |||||||||||||||| || ||||||||||||||||    
T  20313424 ataatacgtagaaactgcttttgggagaaaaagggagaaagtgataagtcagagaagagaagaggagcaagtttgtagagtcctaattcaaccaatctaa 20313325  T
Q  120 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||| | |||||||||| |||||| ||| ||||| ||| |||||||||||    
T  20313324 ggtaagggtgggactagc-ttctctaatagtgggtt-tataattctgaaatagggtttaaca 20313265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 16063873 - 16063740
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| || |||||| ||||| | ||||||| |||||||| | | ||||||||||||||||||||||||||||||| ||||||||||    
T  16063873 aaaagggagaaagtgagaagttagagaaagagaagaggagcaagcttgtagagtctgtattcaaccaatctaaggtaagggtgggactacctttctctaa 16063774  T
Q  147 taatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||| ||||||||||||||||||||    
T  16063773 taatgggttgtataattctaaaaaagggtttaac 16063740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 21504282 - 21504161
Alignment:
Q  25 acgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaa 124  Q
    |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||    
T  21504282 acgtagaaactgcttt-gggagaaaaggggagaaagtgagaagtaagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaaggtaa 21504184  T
Q  125 gggtgggactaactttctctaat 147  Q
     |||||||||||| |||| ||||    
T  21504183 aggtgggactaaccttctttaat 21504161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 32607229 - 32607380
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaat--gagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 127  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||| |||||||   ||||||  | |||||| |||| |  | | |||||||||||||||    
T  32607229 aaactgcttttgggagaaaaagagagaaagtgagaagtcagagaaagagaaaagaggagcaatctcgtagagaccgatt--atctaatctaaggtaaggg 32607326  T
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  32607327 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 32607380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 18744931 - 18744863
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  18744931 caatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaac 18744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 21398546 - 21398697
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatc 116  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| |||             ||||||  |||||||| ||||  ||| | ||||    
T  21398546 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccga--tcatctaatc 21398643  T
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 170  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21398644 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaa 21398697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 17011653 - 17011528
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  17011653 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 17011554  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| ||||| |||||||||||||    
T  17011553 aattggggctttaggagtgaaaactg 17011528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 265963 - 265838
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||||  ||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||| |||||||    
T  265963 aagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttggattgatga 265864  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||| ||||||||||||    
T  265863 aattggggcttttcgagtgaaaactg 265838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 29448765 - 29448640
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||| || |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||  ||||| ||||||||    
T  29448765 aagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatga 29448666  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  29448665 aattggggcttttggagtgaaaactg 29448640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 23199207 - 23199270
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaac 23199270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 36508870 - 36508973
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| |||||||||||||||||| ||||||| ||||||||||| || |||||||  ||||| ||||||| ||||| |||| ||| ||| |    
T  36508870 aagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagatca 36508969  T
Q  347 aatt 350  Q
    ||||    
T  36508970 aatt 36508973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 31622239 - 31622121
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaagagaaaatg--agcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctcta 145  Q
    |||||||||||||||||| ||||||||| |||||||   |||||| |||||||| | |||  || | |||||||||||||||||||| ||||||||||||    
T  31622239 aaaagggagaaagtgagaagtcagagaa-agaaaatagaagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggattaactttctcta 31622141  T
Q  146 ataatgggttgtatgattct 165  Q
    ||  | |||||||| |||||    
T  31622140 attttaggttgtataattct 31622121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 31622023 - 31621964
Alignment:
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  31622023 taagggtggaactatctttctctaataattggttgtatgattctaaaaatgggtttaaca 31621964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 6551285 - 6551353
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  6551285 caatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaac 6551353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 26758602 - 26758670
Alignment:
Q  12 agagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||| || ||||||||||||||||||| | |||||||||||||||||||||| ||| || |||||||    
T  26758602 agagagtcagaatacgtagaaactgcttttgcgagaaaaagggagaaagtgagaagtcggataagagaa 26758670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 1627071 - 1627121
Alignment:
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 171  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaa 1627121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 20469171 - 20469206
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  20469171 caatctaaggtaagggtgggactaactttctctaat 20469206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 20765373 - 20765436
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggt 310  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||||| || |||||||    
T  20765373 aagagtagataatctgatgaattaaagtaataagtggtgttcatgatgtagaataatcataggt 20765436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 21300040 - 21300074
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  21300040 aatctaaggtaagggtgggactaactttctctaat 21300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 21398962 - 21399024
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||||||||||| || |||||| |||||||||||| || ||||| |||||||| |||||    
T  21398962 tgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggtagatga 21399024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 21617924 - 21617958
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  21617924 aatctaaggtaagggtgggactaactttctctaat 21617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 660841 - 660785
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagg 173  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||    
T  660841 ctaaggtaaggg-gggactagctttctctaataaggggttgtataattctgaaaaagg 660785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 20566608 - 20566568
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  20566608 tcaatcaatctaaggtaagggtgagactaactttctctaat 20566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 33472726 - 33472790
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||    
T  33472726 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 33472790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 36508633 - 36508697
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||| |||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 36508697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 17011781 - 17011750
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  17011781 ctaaggtaagggtgggactaactttctctaat 17011750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 266090 - 266060
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaat 266060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 21504064 - 21503971
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    |||||||| | |||| |||||||||  ||| || || |||||||||||||||| || ||||||| |||||| ||||  | ||||| ||||||||    
T  21504064 aagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggt 21503971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 30616663 - 30616602
Alignment:
Q  120 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||| ||||||||||||  |  ||||||||||||| |||| || |||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaaatggatttaaca 30616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 493
Target Start/End: Original strand, 21402109 - 21402141
Alignment:
Q  461 tagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||| |||||||||||||||||||||||||||    
T  21402109 tagttggaattatgtgaagcattgttgatgatg 21402141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 21403526 - 21403479
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| ||||||||||| |||||||| ||||||    
T  21403526 ttaattgatgattt-gtagttggaattatgtgacgcattgttaatgatg 21403479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 21404151 - 21404107
Alignment:
Q  103 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| |||||||||||||||||| |||||||||| |||| ||||    
T  21404151 gaatttaaccaatctaaggtaaggatgggactaaccttctttaat 21404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 21419750 - 21419703
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| ||||||||||| |||||||| ||||||    
T  21419750 ttaattgatgattt-gtagttggaattatgtgacgcattgttaatgatg 21419703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 27868737 - 27868801
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  27868737 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 27868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 28344899 - 28345052
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 127  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||| || |||||||||||| ||||||| ||||||    
T  28344899 tagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaagagaagaggagcaaatatgtacagtccgaattcaacctatctaagataaggg 28344998  T
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    || ||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  28344999 tgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaaca 28345052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 23801649 - 23801484
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgag---caagtttgtagagcccgaattcaacca----a 114  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| | |||   |||| |||||||| || ||||||| ||    |    
T  23801649 aatacgtagaaactgattt-gggagaaaaagggagaaagtgagaagtcagagaagagaagaagaggagcaagcttgtagagtccaaattcaatcatctaa 23801551  T
Q  115 tctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23801550 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 23801484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 36734376 - 36734513
Alignment:
Q  42 gggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 141  Q
    |||||||||||||||||||||||| || |||||  |||| | ||||||| ||| |||| |||||||||| ||||||||||||||||||||| |||| |||    
T  36734376 gggagaaaaagggagaaagtgagaagttagagagaagaagaggagcaagcttgcagagtccgaattcaatcaatctaaggtaagggtgggattaac-ttc 36734474  T
Q  142 tctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||| ||| ||||||||| |||||||||||    
T  36734475 tctaataatgggtt-tataattctaaaatagggtttaaca 36734513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 17307623 - 17307508
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 129  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  17307623 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaaaatcgtagagaccga--tcatctaatctaaggtaagggtg 17307526  T
Q  130 ggactaactttctctaat 147  Q
    ||||||||||||||||||    
T  17307525 ggactaactttctctaat 17307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 21315471 - 21315539
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21315471 caatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 21335261 - 21335329
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21335261 caatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21335329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 149633 - 149736
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||| ||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  149633 aagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 149732  T
Q  347 aatt 350  Q
    ||||    
T  149733 aatt 149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 18358132 - 18358219
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  18358132 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactg 18358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 25184114 - 25183989
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||  ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  25184114 aagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 25184015  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  25184014 aattggggcttttggagtgaaaactg 25183989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 31346008 - 31345921
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| | ||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  31346008 gttcaggctatagaataaacataggttgagtttcctatcaaatttggtatttgggttgatgaaattggggcttttggagtgaaaactg 31345921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 21369452 - 21369282
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaa--------------tgagcaagtttgtagagcccgaatt 107  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||| |||||||||||||| |              |||||||  |||||||| ||||  |    
T  21369452 aatacatagaaactgtttttgggagaaaaaaggagaaagtgagaagtcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccga--t 21369355  T
Q  108 caaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    || | ||||||||||||||||||||| | |||||||||| |||||||||||| ||||| ||||||||||||||    
T  21369354 catctaatctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaac 21369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 14183597 - 14183688
Alignment:
Q  251 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttg 342  Q
    |||| |||||||||||| ||   |||||| ||||||||||||||| ||| || |||||||||||||| ||||||| ||||||||||||||||    
T  14183597 gtagataatccgatgaactagtttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggttg 14183688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 21915511 - 21915424
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| |||| || ||||| |||| ||||||||||||||| |||||||||||||||||||    
T  21915511 gttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttaggttgatgaaattggggcttttggagtgaaaactg 21915424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 370
Target Start/End: Original strand, 21081134 - 21081219
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaac 370  Q
    ||||||| ||||||| || |||| || |||||| ||||||| ||| | |||||||||||||||||||| |||||||||||||||||    
T  21081134 gttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttgatgaaattggggcttttggagtgaaaac 21081219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 1383779 - 1383863
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||||||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||||||  ||||| ||||||| |||||    
T  1383779 aagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 1383863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 23610679 - 23610615
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 23610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 28652678 - 28652762
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||||||| |||||| ||||||||||||||||| || ||||||||| |||||| || |||||| |||||||||||| || |||||    
T  28652678 aagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaaatttgg 28652762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14179624 - 14179679
Alignment:
Q  25 acgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  14179624 acgtagaaactgcttttgggagaaaaagggagaaagtgagaagttagagaagagaa 14179679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 23801418 - 23801351
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagag 314  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||    
T  23801418 aagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataataggtagag 23801351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 149497 - 149555
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 171  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||    
T  149497 aatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaa 149555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 19196946 - 19197000
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  19196946 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 19197000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 14183359 - 14183417
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||| ||||||||||||||||||||| || ||||| ||| ||||    
T  14183359 aatacgtagaaactgcttttgggagaaaaagggagaaagtgggaagtcagtgaaaagaa 14183417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 330
Target Start/End: Original strand, 14179855 - 14179938
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttg 330  Q
    |||||||| ||||| |||||| || | |||||| ||||||||||||||| ||| || ||||||||| |||| ||||||| ||||    
T  14179855 aagagtagataatctgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagtgtttcctatcaaatttg 14179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 24516243 - 24516208
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  24516243 caatctaaggtaagggtgggactaactttctctaat 24516208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 27852725 - 27852690
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  27852725 caatctaaggtaagggtgggactaactttctctaat 27852690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 3539893 - 3539859
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  3539893 aatctaaggtaagggtgggactaactttctctaat 3539859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 22502027 - 22501993
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  22502027 aatctaaggtaagggtgggactaactttctctaat 22501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 22509961 - 22509927
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  22509961 aatctaaggtaagggtgggactaactttctctaat 22509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 25142260 - 25142226
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||||||    
T  25142260 aatctaaggtaagggtgggactaactttctctaat 25142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 357934 - 357885
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 19647155 - 19647054
Alignment:
Q  251 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||| |||||| |||||||||  ||| || || |||||||||||||||| ||| |||||||  |||| ||||||| ||||| |||| ||| | |||||||    
T  19647155 gtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgggatttaggtagttgaaatt 19647056  T
Q  351 gg 352  Q
    ||    
T  19647055 gg 19647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 27852802 - 27852765
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27852802 ggagaaaaagggagaaagtgagaagtcagagaagagaa 27852765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 14184904 - 14184951
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  14184904 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 14184951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 23338562 - 23338626
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  23338562 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23338626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 45535991 - 45535947
Alignment:
Q  103 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  45535991 gaatttaaccaatctaaggtaagggtgggactaaccttctttaat 45535947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 20005958 - 20006032
Alignment:
Q  104 aattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    |||| ||||||||||||||||||||||||||| | |||| |||| ||| | | ||| ||||| |||||||||||||    
T  20005958 aatttaaccaatctaaggtaagggtgggactagccttctttaatcatgag-tctataattctgaaaaagggtttaa 20006032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 21080968 - 21080999
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  21080968 ctaaggtaagggtgggactaactttctctaat 21080999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 40912373 - 40912342
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaat 40912342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 2523747 - 2523777
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  2523747 taaggtaagggtgggactaactttctctaat 2523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 5031129 - 5031159
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaat 5031159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 20590445 - 20590511
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    ||||||||| |||||| || |||||||  ||||||||||||| |||||  ||||||| |||||||||    
T  20590445 tgttcaggtggtagaataatcataggttaagttttctatcaaatttggggtttgggtagatgaaatt 20590511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 24780840 - 24780870
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaat 24780870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 34491239 - 34491304
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaa-taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||| ||| |||||| ||| | ||||||| ||||| |||||||||||||||    
T  34491239 ctaaggtaagggtgggactagctt-ctctaaataacgagttgtataattctgaaaaagggtttaaca 34491304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 41301092 - 41301158
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| |||||||  |||| |||||||| |||||||||    
T  41301092 tgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagatgaaatt 41301158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 45528597 - 45528563
Alignment:
Q  103 gaattcaaccaatctaaggtaagggtgggactaac 137  Q
    ||||| |||||||||||||||||||||||||||||    
T  45528597 gaatttaaccaatctaaggtaagggtgggactaac 45528563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 45535847 - 45535737
Alignment:
Q  251 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||| |||||| |||||||||  ||| || || |||||||||||||||| ||| |||||||  |||| || |||| ||||| |||||||| | || ||||    
T  45535847 gtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatttgggtagttgtaatt 45535748  T
Q  351 ggtgcttttgg 361  Q
    || | ||||||    
T  45535747 ggggattttgg 45535737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 22695359 - 22695322
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||||||| || |||||||||||    
T  22695359 ggagaaaaagggagaaagtgagaagtaagagaagagaa 22695322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 478
Target Start/End: Original strand, 28346457 - 28346496
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaa 478  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  28346457 agcaaaattaattgatga-tttgtagttggaattatgtgaa 28346496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 30212667 - 30212714
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  30212667 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 30212714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 43692 - 43849
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||| | ||||||| |||||||| | |||||||||||||||||||    
T  43692 aatacgtagaaactgcttttgggatacaaagggagaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtcggaattcaaccaatctaagg 43791  T
Q  122 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||| | ||||||||||||||||| ||| ||||| ||| |||||||||||    
T  43792 taagggtgggactagc-ttctctaataatgggtt-tataattctgaaatagggtttaaca 43849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 39000 - 39132
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| | ||||||| |||| ||| |||||||||||||||||||||    
T  39000 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtccgagaagagaagaggagcaagcttgttgagtccgaattcaaccaatctaagg 39099  T
Q  122 taagggtgggactaactttctctaataatgggtt 155  Q
    |||||||||||||| | |||||||||||||||||    
T  39100 taagggtgggactagc-ttctctaataatgggtt 39132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 29045189 - 29045064
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||| ||||||||||| || |||||||||||||||| || |||||||||||||||||||||| ||||| ||||| ||||||||    
T  29045189 aagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgagttgatga 29045090  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| ||| |||||||||||||||    
T  29045089 aattggggctattggagtgaaaactg 29045064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 1819099 - 1818974
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 121  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||| | ||||||| || ||||| | |||||||||||||||||||    
T  1819099 aatacgtagaaactgtttttgggagaaaaggggagaaagtgagaagtcagagaagagaagaggagcaagcttatagagtctgaattcaaccaatctaagg 1819000  T
Q  122 taagggtgggactaactttctctaat 147  Q
    |||||||| ||||||| |||| ||||    
T  1818999 taagggtgagactaaccttctttaat 1818974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 13285890 - 13285739
Alignment:
Q  28 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagg 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||| | |||  || | ||||||||||||||    
T  13285890 tagaaactgctttcgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagg 13285791  T
Q  127 gtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 178  Q
    ||||||||||| |||| |||| ||| |||  || ||||| |||| |||||||    
T  13285790 gtgggactaaccttctataatcatgagtttcataattctgaaaaggggttta 13285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 19825401 - 19825549
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 129  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  19825401 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtg 19825498  T
Q  130 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
     ||||| |||||||||||||||||||| || ||||| ||||||| ||||||    
T  19825499 agactagctttctctaataatgggttgcataattctgaaaaaggttttaac 19825549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 10446311 - 10446205
Alignment:
Q  75 agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 174  Q
    |||||| | |||||||  ||||||| | ||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  10446311 agagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaagggg 10446212  T
Q  175 tttaaca 181  Q
    |||||||    
T  10446211 tttaaca 10446205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 35057671 - 35057577
Alignment:
Q  42 gggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaa 136  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| || ||||||| ||||||||||||| |||||||||||    
T  35057671 gggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaaacttgtagagtccaaattcaatcaatctaaggtaatggtgggactaa 35057577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 29045392 - 29045259
Alignment:
Q  48 aaaagggagaaagtgagaggtcagaga-agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| |||||||| |||||| | ||||||| || |||||  || | ||| | | ||||||||||||||| ||||| ||||||||||    
T  29045392 aaaagggagaaagtgagaagtcagagagagagaagaggagcaagctt-tagagttcggaatcatctattctaaggtaagggtgagactagctttctctaa 29045294  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||| ||| | |||||||||||||||    
T  29045293 taatgggttgtataattttgaaaaagggtttaaca 29045259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 15891696 - 15891821
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| |||| || || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  15891696 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 15891795  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  15891796 aattggggcttttggagtgaaaactg 15891821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 15900781 - 15900906
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| |||| || || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  15900781 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 15900880  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  15900881 aattggggcttttggagtgaaaactg 15900906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 27557551 - 27557467
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaa 369  Q
    ||||||||||||||| || ||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||    
T  27557551 gttcaggttgtagaataaacataggttgagttttctatcaaatttgggatttgagtcgatgaaattggggcttttggagtgaaaa 27557467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 23415793 - 23415706
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||    
T  23415793 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgacaactg 23415706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 18982634 - 18982561
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| ||||||||||||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  18982634 tcaatcaatctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaac 18982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 21683074 - 21683138
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaac 21683138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 23658145 - 23658078
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| ||||||||||||||    
T  23658145 aatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaac 23658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 25921926 - 25921842
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||||||  ||||| |||||||||||||||| | ||||||||||||||||||| || |||||| | |||||||||| ||||||||    
T  25921926 aagagtaaataatctgatgaattaaggtaatgattggtgttcaggttgtagaataatcataggaaaagttttctataaattttgg 25921842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 15173637 - 15173704
Alignment:
Q  304 cataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaact 371  Q
    ||||||| |||||| ||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||    
T  15173637 cataggttgagtttcctatcaaatttgggatttggattgatgaaattggggcttttggagtgaaaact 15173704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 20410512 - 20410575
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||| | || ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaac 20410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 30673392 - 30673432
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  30673392 tcaaccaatctaaggtaagggtgggattaactttctctaat 30673432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 34140390 - 34140493
Alignment:
Q  52 gggagaaagtgagaggtcagagaag-agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 150  Q
    |||||||||||||| || ||||||| |||| | ||||||| ||||||||   | | ||| | ||||||||||||||||||||||| | ||||||||||||    
T  34140390 gggagaaagtgagaagttagagaaggagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataat 34140488  T
Q  151 gggtt 155  Q
    |||||    
T  34140489 gggtt 34140493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 34153006 - 34153109
Alignment:
Q  52 gggagaaagtgagaggtcagagaag-agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 150  Q
    |||||||||||||| || ||||||| |||| | ||||||| ||||||||   | | ||| | ||||||||||||||||||||||| | ||||||||||||    
T  34153006 gggagaaagtgagaagttagagaaggagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataat 34153104  T
Q  151 gggtt 155  Q
    |||||    
T  34153105 gggtt 34153109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 10444998 - 10444944
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||    
T  10444998 agcaaaattaattgatgattt-gtagttgaaattatgtgaagtattgttgatgatg 10444944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 15890707 - 15890742
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  15890707 caatctaaggtaagggtgggactaactttctctaat 15890742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 35056188 - 35056134
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||    
T  35056188 agcaaaattaattgatgattt-gtagttgaaattatgtgaagtattgttgatgatg 35056134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 19167843 - 19167901
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||||||||||||||| | ||||||| ||||||| | |||||||| |||||    
T  19167843 tcaaccaatctaaggtaagggtggaattaactttgtctaatattaggttgtataattct 19167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 19235185 - 19235127
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||||| ||||||||||| ||||||||||||||  | |||||||| |||||    
T  19235185 tcaaccaatctaagttaagggtgggattaactttctctaattttaggttgtataattct 19235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 28948637 - 28948579
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| |||||||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  28948637 tcaatcaatctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 28948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 493
Target Start/End: Complemental strand, 1817846 - 1817795
Alignment:
Q  441 aaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  1817846 aaaattaattgatgattt-gtagttggaattatgtgaagtatttttgatgatg 1817795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 13803022 - 13803069
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  13803022 ttaattgatgattt-gtagttggacttatgtgaagcattgttgatgatg 13803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 15998942 - 15998878
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||| |||||||||||||||||  |  ||||||| ||||| |||||| |||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaac 15998878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 25601453 - 25601537
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 331  Q
    |||||||| |||||| | ||||||||||||||| || |||||| |||||| || || |||||| ||| |||||||| || |||||    
T  25601453 aagagtaggtaatccaaagaattaaggtaataattgatgttcatgttgtataataatcataggaagaattttctataaaatttgg 25601537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 18459366 - 18459296
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct-aaaaaagggtttaa 179  Q
    ||||||||||||||||||||||||||||| | || |||| ||| | | ||||||||| ||||||||||||||    
T  18459366 aaccaatctaaggtaagggtgggactaacctactttaatcatgag-tatatgattctgaaaaaagggtttaa 18459296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 24267906 - 24267871
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24267906 caatcaaaggtaagggtgggactaactttctctaat 24267871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 7828024 - 7827994
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaat 7827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 18585867 - 18585809
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| |||| || ||||||||||||||||||||||||||||  |  |||||||||||||    
T  18585867 tcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 18585809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 18928737 - 18928703
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||| ||||||||||||||||||    
T  18928737 aatctaaggtaagggtaggactaactttctctaat 18928703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 23150287 - 23150317
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaat 23150317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 23658224 - 23658190
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgaga 65  Q
    |||||||||| ||||||||||||||||||||||||    
T  23658224 aaactgcttttgggagaaaaagggagaaagtgaga 23658190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 34964133 - 34964099
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgaga 65  Q
    |||||||||| ||||||||||||||||||||||||    
T  34964133 aaactgcttttgggagaaaaagggagaaagtgaga 34964099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 13765236 - 13765172
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  13765236 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 13765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 19655192 - 19655261
Alignment:
Q  76 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| ||||||||||||| |||||||||||||||||    
T  19655192 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 19655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 23956752 - 23956688
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  23956752 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 23956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 27125438 - 27125507
Alignment:
Q  76 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| ||||||||||||| |||||||||||||||||    
T  27125438 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 27125507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 31021884 - 31021948
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  31021884 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 31021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 35057430 - 35057366
Alignment:
Q  286 ttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||| || | || ||  ||||||||||||| ||||| |||||||| |||||||||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaatt 35057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 78; Significance: 4e-36; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 66206 - 66330
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||| ||||||||    
T  66206 aagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagag-tttctatcaaatttgggatttgagttgatga 66304  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| | |||||||||||||||||    
T  66305 aattggggattttggagtgaaaactg 66330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 73209 - 73075
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| |||| |||| ||||| | ||||||| |||||||| | |||  || | ||| ||||||||||||||||||||||||||||||    
T  73209 aaaagggagaaagtgagaagtcaaagaaagagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaa 73110  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||| |||||||||||||||||| ||||||||||    
T  73109 taatgagttgtatgattctaaaaaggggtttaaca 73075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 76059 - 75925
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||| ||||||||||||| ||||||||| ||||| |  || ||| |||||||| | |||  || | ||||||||||||||||||||||| ||||||| ||    
T  76059 aaaatggagaaagtgagaagtcagagaaagagaagagaagtaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactagctttctccaa 75960  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||| ||||||||||    
T  75959 taatgggttgtatgattctaaaaaggggtttaaca 75925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 111416 - 111348
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  111416 aatctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 66000 - 66136
Alignment:
Q  45 agaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctc 143  Q
    ||||||||||||||||||||| |||| |||| ||||| |  |||||| || ||||| ||| | ||| | | |||||||||||||||||||||  |||||     
T  66000 agaaaaagggagaaagtgagaagtcatagaaagagaagagcagcaagctt-tagagtccggaatcatctattctaaggtaagggtgggactagatttctt 66098  T
Q  144 taataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  66099 taataatgggttgtataattctgaaaaagggtttaaca 66136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 328287 - 328318
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaat 328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 15547 - 15678
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  15547 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt-ctctaa 15644  T
Q  147 taatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||| |||||||||||||||||||||||||||    
T  15645 taatggtttgtatgattctaaaaaagggtttaac 15678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 127273 - 127407
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    ||||| |||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  127273 aaaagagagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 127372  T
Q  147 taatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||| ||||||||||||||||| ||||||||||    
T  127373 taatggattgtatgattctaaaaaggggtttaaca 127407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 261 - 149
Alignment:
Q  35 tgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggact 134  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||  |||||||| |||||||| |||| ||||||||||||||||||||    
T  261 tgcttttgggagaaaaatggagaaagtgagaagtcagtgaagagaagatgagcaaacttgtagagtccgaattcgaccattctaaggtaagggtgggact 162  T
Q  135 aactttctctaat 147  Q
    ||| |||| ||||    
T  161 aaccttctttaat 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 3353 - 3485
Alignment:
Q  48 aaaagggagaaagtgagaggtcagaga-agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||| | || ||||| | |||| | ||||||| || ||||| ||||| ||| | ||||||||||||||||||||||| ||||||||||    
T  3353 aaaagggagaaagtgaaaagttagagacaaagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaa 3451  T
Q  147 taatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||| ||||||||||||| ||||||||||||||    
T  3452 taatgcgttgtatgattctgaaaaagggtttaac 3485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 69980 - 70105
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||||||  |||||| |||||| ||||||| ||||| ||||||||||||||    
T  69980 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttgatga 70079  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  70080 aattggggcttttggagtgaaaactg 70105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 69852 - 69883
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  69852 ctaaggtaagggtgggactaactttctctaat 69883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 2165 - 2066
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||| ||||||||||| ||||| |||||  |||||||    
T  2165 aagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttgggatttgaattgatga 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 2306 - 2235
Alignment:
Q  110 accaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||    
T  2306 accaatctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaaca 2235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 8966 - 8843
Alignment:
Q  48 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 146  Q
    |||||||||||||||||| ||||||||| ||| ||| ||||||| |||||||| | ||| ||| | |||||||| |||||||||||||| |||| |||||    
T  8966 aaaagggagaaagtgagaagtcagagaaagaggaaaggagcaagcttgtagagtctgaaatcatctaatctaagttaagggtgggactagctttatctaa 8867  T
Q  147 taatgggttgtatgattctaaaaa 170  Q
    |||||| |||||||||||| ||||    
T  8866 taatggattgtatgattctgaaaa 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 8766 - 8673
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||| |||  || |||||||||||||||||||||| ||||| ||||||||    
T  8766 aagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttgggatttgggt 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 58; Significance: 4e-24; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 21022 - 20897
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  21022 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 20923  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  20922 aattggggcttttggagtgaaaactg 20897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 33990 - 33913
Alignment:
Q  294 gtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    |||||| || ||||||| |||||| ||| ||| ||||  |||||||||||||||||||| |||||||||||||||||||    
T  33990 gtagaataaacataggttgagtttccta-caaatttgagatttgggttgatgaaattggggcttttggagtgaaaactg 33913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 21150 - 21119
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  21150 ctaaggtaagggtgggactaactttctctaat 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 34165 - 34134
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  34165 ctaaggtaagggtgggactaactttctctaat 34134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 40164 - 40095
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40164 caatctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaaca 40095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 21904 - 22029
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || || |||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  21904 aagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 22003  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||| ||||||||||||    
T  22004 aattggggctttttgagtgaaaactg 22029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 6437 - 6569
Alignment:
Q  50 aagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaata 148  Q
    ||||||| |||||||| ||||||||| ||| | |  |||||| |||||||| | ||| ||| | |||||||||||| || ||||||| ||||||||||||    
T  6437 aagggagcaagtgagaagtcagagaaagaggagagaagcaagcttgtagagtctgaaatcatctaatctaaggtaaaggcgggactacctttctctaata 6536  T
Q  149 atgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||||| |||| ||||||||||    
T  6537 atgggttgtatgattctgaaaaggggtttaaca 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 6631 - 6724
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 340  Q
    |||||||| ||||  |||||||||||||||||| | ||||||| ||||||||  || |||| ||||||||||||||||| ||||| ||||||||    
T  6631 aagagtaggtaattagatgaattaaggtaataattcgtgttcatgttgtagagtaatcataagtagagttttctatcaaatttgggatttgggt 6724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 2937 - 2870
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2937 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 2739 - 2636
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| |||||||||||||||||| |||||||||| |||| ||| || |||| ||  ||||| ||||||| ||||| ||||| || |||||    
T  2739 aagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttgggatttgagtagatga 2640  T
Q  347 aatt 350  Q
    ||||    
T  2639 aatt 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 21465 - 21362
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||||||||| || ||||| |  ||||||||||||| ||||| ||||||||  ||||    
T  21465 aagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatga 21366  T
Q  347 aatt 350  Q
    ||||    
T  21365 aatt 21362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 21668 - 21616
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattc 164  Q
    |||||||||||||||||||||||| |||||||||||  |  ||||||||||||    
T  21668 caatctaaggtaagggtgggactagctttctctaattctaagttgtatgattc 21616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 29568 - 29603
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29568 caatctaaggtaagggtgggactaactttctataat 29603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 22047 - 21944
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| ||||| ||||||||||||||| || ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  22047 aagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 21948  T
Q  347 aatt 350  Q
    ||||    
T  21947 aatt 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 54; Significance: 9e-22; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 1862 - 1737
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||| | ||||||||||||||    
T  1862 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttgatga 1763  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  1762 aattggggcttttggagtgaaaactg 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 5044 - 5091
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgatt 163  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagttgtatgatt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 10754 - 10801
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgatt 163  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagttgtatgatt 10801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 29343 - 29468
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  29343 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 29442  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||| ||||||    
T  29443 aattggggcttttggagtgcaaactg 29468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 2077 - 2009
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2077 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 2009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 19912 - 19844
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  19912 aatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaaca 19844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 178
Target Start/End: Complemental strand, 5588 - 5445
Alignment:
Q  34 ctgctttcgggagaaaaagggagaaa-gtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggg 131  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||| ||||| | ||||||  | |||||| || |  ||| | |||||||||||||||||||    
T  5588 ctgcttttgggagaaaa-gggagaaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccaa--tcatctaatctaaggtaagggtggg 5492  T
Q  132 actaactttctctaataatgggttgtatgattctaaaaaagggttta 178  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||||||    
T  5491 actacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 11668 - 11604
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaaca 11604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 186191 - 186259
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  186191 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 186259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 14005 - 13938
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||    
T  14005 aatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaac 13938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 20007 - 19976
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  20007 ctaaggtaagggtgggactaactttctctaat 19976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 14084 - 14052
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtga 63  Q
    |||||||||| ||||||||||||||||||||||    
T  14084 aaactgcttttgggagaaaaagggagaaagtga 14052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 18482 - 18395
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||    
T  18482 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaagtggggcttttggagtgaaaactg 18395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 14526 - 14648
Alignment:
Q  57 aaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggtt 155  Q
    ||||||||| |||| |||| ||||| | ||||||| || ||||| ||| | ||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  14526 aaagtgagaagtcaaagaaagagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggtt 14624  T
Q  156 gtatgattctaaaaaagggtttaa 179  Q
    |||| ||||| |||||||||||||    
T  14625 gtataattctgaaaaagggtttaa 14648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 23584 - 23706
Alignment:
Q  57 aaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggtt 155  Q
    ||||||||| |||| |||| ||||| | ||||||| || ||||| ||| | ||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  23584 aaagtgagaagtcaaagaaagagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggtt 23682  T
Q  156 gtatgattctaaaaaagggtttaa 179  Q
    |||| ||||| |||||||||||||    
T  23683 gtataattctgaaaaagggtttaa 23706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 14751 - 14814
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    ||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  14751 gttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 23809 - 23872
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    ||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  23809 gttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 8885 - 8760
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||  ||||| ||||||||    
T  8885 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatga 8786  T
Q  347 aattggtgcttttggagtgaaaactg 372  Q
    |||||| |||||||||||||||||||    
T  8785 aattggggcttttggagtgaaaactg 8760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 9013 - 8982
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  9013 ctaaggtaagggtgggactaactttctctaat 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 11160 - 11221
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 178  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggttta 11221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 16409 - 16482
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| |||||||||||||||||| || ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  16409 tcaatcaatctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaac 16482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 18691 - 18762
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 178  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  18691 tcaaccaatctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggttta 18762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 492
Target Start/End: Original strand, 83234 - 83269
Alignment:
Q  457 tttgtagttagaattatgtgaagcattgttgatgat 492  Q
    ||||||||| ||||||||||||||||||||||||||    
T  83234 tttgtagttggaattatgtgaagcattgttgatgat 83269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 10999 - 10936
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  10999 taaggtaagggtggaactagctttctctaataatgggttgtatgattcta-aaaagggtttaaca 10936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 11106 - 11048
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||||||||  ||||||||||||||||| ||  | | ||||||||||||    
T  11106 aatacgtagaaactgctttttggagaaaaagggagaaaatggtaagccagagaagagaa 11048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 5520 - 5678
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaag 120  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| |||| ||||||||| | | | ||| |||||||     | |||||| |||||||||    
T  5520 aatacgtagaaacgacttttgggagaaaaatggagaaagtgagaagtcacagaagagaagaagggaaagcttgtagaatttaggattcaatcaatctaag 5619  T
Q  121 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||||||| | ||||||||||||||||| ||| ||||| ||| ||| |||||||    
T  5620 gtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaataggatttaaca 5678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 18328 - 18264
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaac 18264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 67178 - 67143
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||| ||||||||||||||||||||||    
T  67178 caatctaaggtaaaggtgggactaactttctctaat 67143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 8742 - 8805
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtt 176  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||    
T  8742 aatctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggtt 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 42560 - 42473
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || | ||||| |||||| ||||||| |||||||||| | ||||||||||||| |||||||||||||||||||    
T  42560 gttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattttgtttgatgaaattggggcttttggagtgaaaactg 42473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 5685 - 5620
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattct--aaaaaagggtttaac 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 32031 - 31950
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaa 367  Q
    ||||||| ||||||| ||| |||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  32031 gttcaggctgtagaataac-ataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaa 31950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 4913 - 4836
Alignment:
Q  295 tagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||| || ||||||| |||||| || |||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  4913 tagaataaacataggttgagtttcctttcaaatttggaattagggttgatgaaattggggcttttggagtgaaaactg 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 5082 - 5051
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaat 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 4913 - 4836
Alignment:
Q  295 tagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||| || ||||||| |||||| || |||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  4913 tagaataaacataggttgagtttcctttcaaatttggaattagggttgatgaaattggggcttttggagtgaaaactg 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 5082 - 5051
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaat 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 17516 - 17584
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||| |||||| |||| ||||||||||| |||||| ||||| ||||||||||||||    
T  17516 caatctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaac 17584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 23754 - 23710
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 75  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  23754 aaacggcttttgggagaaaaagggagaaagtgagaagtcagagaa 23710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 8477 - 8531
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  8477 agcaaaattaattgatgattt-gtagttggaattatgtgaagcattgttgatgatg 8531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 7506 - 7575
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    ||||||||||||||||||||||||||||| |||| |||| ||| | | ||||||||| |||||||||||||    
T  7506 aaccaatctaaggtaagggtgggactaaccttctttaattatgag-tatatgattctgaaaaagggtttaa 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 19463 - 19550
Alignment:
Q  285 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 372  Q
    ||||||| ||||||| || |||| || |||||| ||||||| ||||| || || |||||||||||||| |||||||||||||||||||    
T  19463 gttcaggctgtagaataaacataagttgagtttcctatcaaatttgggatatgagttgatgaaattggggcttttggagtgaaaactg 19550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 1128 - 1065
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaac 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 40051 - 40106
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaaga 77  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  40051 aatatgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaga 40106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 23587 - 23527
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtt 176  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| |||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggtt 23527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 40153 - 40226
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggt-tgt-atgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || | | || ||||||||||||||||||||    
T  40153 aaccaatctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaac 40226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 2454 - 2508
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 171  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaa 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 369
Target Start/End: Complemental strand, 11148 - 11026
Alignment:
Q  247 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 346  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||  | |||||| ||||||| ||||| |||| |||||||||    
T  11148 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttgatga 11049  T
Q  347 aattggtgcttttggagtgaaaa 369  Q
    |||||| ||||||||||||||||    
T  11048 aattggggcttttggagtgaaaa 11026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 19366 - 19308
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||    
T  19366 aatacgtagaaactacttttgggagaaaaagggagaaagtgagaagtcatagaagagaa 19308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 19263 - 19196
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||| |||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  19263 aatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 19196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 26789 - 26716
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||| ||||||| ||||||||||||| ||||||||||||||  | |||||||| ||||| ||||||||||||||    
T  26789 tcaatcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaac 26716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 23730 - 23604
Alignment:
Q  53 ggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaa-ttcaaccaatctaaggtaagggtgggactaactttctctaataatg 151  Q
    ||||||||||||| |||||||| ||||| | | | ||| |||||||  || || ||  ||||||||||||||||||||||||| || |||| |||| |||    
T  23730 ggagaaagtgagaagtcagagatgagaagaagggaaagcttgtagaatccaaaatttgaccaatctaaggtaagggtgggactgaccttctttaatcatg 23631  T
Q  152 ggttgtatgattctaaaaaagggtttaa 179  Q
     | | ||| |||||||||||||||||||    
T  23630 ag-tatataattctaaaaaagggtttaa 23604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 5304 - 5368
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaac 5368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 5102 - 5160
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  5102 aatacgtagaaacaacttttgggagaaaaatggagaaagtgagaagtcagagaagagaa 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 1971 - 2031
Alignment:
Q  250 agtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggt 310  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||| || |||||||    
T  1971 agtagataatctgatgaattaaggtaataagtggtgttcatgttgtagaataatcataggt 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 96458 - 96386
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    ||||||||||| |||| ||||||||||||||||||||||  || ||||||||||||| |||| || |||||||    
T  96458 aaccaatctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaaca 96386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 4988 - 4926
Alignment:
Q  117 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |||||  |||||||||||||    
T  4988 taaggtaagggtgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaac 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 17936 - 18003
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    |||||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||| ||||||    
T  17936 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaac 18003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 2094 - 2152
Alignment:
Q  22 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  2094 aatacgtagaaacaacttttgggagaaaaatggagaaagtgagaagtcagagaagagaa 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 2199 - 2263
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||| ||||||||||  |  ||||||| ||||| ||||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaac 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 18636 - 18681
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaataatgggttgta 158  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18636 aatctaaggtaagggtgggactagctttctctaataatgagttgta 18681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 46003 - 46055
Alignment:
Q  26 cgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagag 78  Q
    |||| |||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  46003 cgtacaaactgcttttgggagataaagggagaaagtgagaagtcagagaagag 46055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 2949 - 2893
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||||||||||||||||||||||| ||||||||||||||  | |||||||| |||||    
T  2949 aaccaatctaaggtaagggtgggattaactttctctaattttaggttgtataattct 2893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 6480 - 6408
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    |||| |||||||||||||||||  ||||| ||||||||||||||| ||||| | ||||| |||||||| ||||    
T  6480 tcaatcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaa 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 38381 - 38503
Alignment:
Q  57 aaagtgagaggtcagagaagagaa-aatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggt 154  Q
    ||||||||| |||||||||||||| |||| | ||| |||||||  || ||||| ||||||||||||||||||||| ||||||| |||| |||| ||| |     
T  38381 aaagtgagaagtcagagaagagaagaatg-gaaagcttgtagaatccagaatttaaccaatctaaggtaagggtgtgactaaccttctttaatcatgag- 38478  T
Q  155 tgtatgattctaaaaaagggtttaa 179  Q
    | ||| ||||| |||||||||||||    
T  38479 tatataattctgaaaaagggtttaa 38503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 195 - 160
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  195 caatctaaggtaagggtgggactaactttctctaat 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 4704 - 4739
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  4704 caatctaaggtaagggtgggactaactttctctaat 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 3317 - 3226
Alignment:
Q  57 aaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||| |||||||||||||| | | | ||| |||||||   | ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  3317 aaagtgagaagtcagagaagagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgggactaaccttctttaat 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 13387 - 13422
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  13387 caatctaaggtaagggtgggactaactttctctaat 13422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 493
Target Start/End: Original strand, 60797 - 60851
Alignment:
Q  438 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  60797 agcaaagttaattgatgattt-gtagttggaattatgtgaagcattattgatgatg 60851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 59648 - 59718
Alignment:
Q  109 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 180  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||| | | ||| ||||| ||||||||||||||    
T  59648 aaccaatctaaggtaagggtgggtctaaccttctttaatcatgag-tatataattctgaaaaagggtttaac 59718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 39975 - 40041
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| |||||||  |||| |||||||| |||||||||    
T  39975 tgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagatgaaatt 40041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 12630 - 12580
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaa 81  Q
    |||||||||| |||||| |||||| |||||||||| |||||||||||||||    
T  12630 aaactgcttttgggagataaagggcgaaagtgagaagtcagagaagagaaa 12580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 426 - 373
Alignment:
Q  128 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 181  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  426 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 1937 - 2012
Alignment:
Q  103 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 179  Q
    ||||| |||||||||||||||| |||||||||||| |||| |||| ||| | | ||| ||||| |||||||||||||    
T  1937 gaatttaaccaatctaaggtaacggtgggactaaccttctttaatcatgag-tctataattctgaaaaagggtttaa 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 19815 - 19775
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  19815 tcaaccaatctaaggtaagggtgagactgactttctctaat 19775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 24486 - 24439
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  24486 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 24439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 33612 - 33659
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagag 78  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  33612 aaactgcttttaggagataaagggagaaagtgagaagtcagagaagag 33659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 360 - 407
Alignment:
Q  445 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 493  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  360 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 49791 - 49751
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  49791 tcaaccaatctaaggtaagggtgggactaaccttctttaat 49751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 106046 - 106098
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattc 164  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||||||||    
T  106046 caatctaaggtaagggtgtgactaactttctctaattctaagttgtatgattc 106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 106303 - 106391
Alignment:
Q  262 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||||| |  ||||||||||||| || || | |||||  ||||| ||||||| ||||| | || ||| |||||||||    
T  106303 gatgaattaaggtaataattattgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttgggagttcggtagatgaaatt 106391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 1348 - 1414
Alignment:
Q  106 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagg 173  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||| |||||||    
T  1348 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctgaaaaagg 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 144
Target Start/End: Original strand, 1054 - 1085
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctct 144  Q
    ||||||||||||||||||||||||||||||||    
T  1054 aatctaaggtaagggtgggactaactttctct 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 575 - 540
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  575 caatctaaggtaagggtgagactaactttctctaat 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 3239 - 3204
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3239 caatctaaggtaagggttggactaactttctctaat 3204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 35547 - 35512
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||| |||||||||||||||||    
T  35547 caatctaaggtaagggtgagactaactttctctaat 35512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 26624 - 26687
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 170  Q
    ||||||||||||| |||||||||||| ||||||||| ||||  | |||||||| ||||| ||||    
T  26624 tcaaccaatctaaagtaagggtgggattaactttctttaattttaggttgtataattctgaaaa 26687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 34421 - 34361
Alignment:
Q  85 agcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||| ||||||||| ||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  34421 agcaattttgtagagtccga--tcatctaatttaaggtaagggtgggactaactttctctaat 34361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 15325 - 15294
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  15325 ctaaggtaagggtgggactaactttctctaat 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 112961 - 112996
Alignment:
Q  112 caatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||| ||||||||||||||||||||||||||    
T  112961 caatctaagataagggtgggactaactttctctaat 112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 117806 - 117837
Alignment:
Q  116 ctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||||||||||||||||||    
T  117806 ctaaggtaagggtgggactaactttctctaat 117837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 1257 - 1227
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaat 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 468 - 498
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaat 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 2611 - 2577
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    |||||| ||||||||||||||||||||||||||||    
T  2611 aatctacggtaagggtgggactaactttctctaat 2577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 196 - 226
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaat 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 6675 - 6733
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 165  Q
    |||| |||| || ||||||||||||||||||||||||||||  |  |||||||||||||    
T  6675 tcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 6733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 9984 - 9918
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 350  Q
    |||||||||||||||| || |||||||  ||||| |||||||  |||| |||||||| |||||||||    
T  9984 tgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagatgaaatt 9918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 58798 - 58768
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  58798 taaggtaagggtgggactaactttctctaat 58768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 78185 - 78215
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaat 78215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 61844 - 61878
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||| |||||||||||||||||    
T  61844 aatctaaggtaagggtgagactaactttctctaat 61878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 16649 - 16683
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgaga 65  Q
    |||||||||| ||||||||||||||||||||||||    
T  16649 aaactgcttttgggagaaaaagggagaaagtgaga 16683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 24131 - 24161
Alignment:
Q  117 taaggtaagggtgggactaactttctctaat 147  Q
    |||||||||||||||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaat 24161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 77743 - 77709
Alignment:
Q  113 aatctaaggtaagggtgggactaactttctctaat 147  Q
    ||||||||||||||||| |||||||||||||||||    
T  77743 aatctaaggtaagggtgagactaactttctctaat 77709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 5631 - 5590
Alignment:
Q  31 aaactgctttcgggagaaaaagggagaaagtgagaggtcaga 72  Q
    |||||||||| |||||||||||||||||||| ||| ||||||    
T  5631 aaactgcttttgggagaaaaagggagaaagtaagaagtcaga 5590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 8058 - 8021
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||||||| || |||||||||||    
T  8058 ggagaaaaagggagaaagtgagaagtaagagaagagaa 8021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 5249 - 5286
Alignment:
Q  43 ggagaaaaagggagaaagtgagaggtcagagaagagaa 80  Q
    ||||||||||||||||||||||| || |||||||||||    
T  5249 ggagaaaaagggagaaagtgagaagtaagagaagagaa 5286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 1029 - 965
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||||| | || |||||||  ||||| ||||||| ||||| |||||||||| |||||    
T  1029 tgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggatttgggttggtgaaa 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 3853 - 3789
Alignment:
Q  284 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 348  Q
    |||||||||||| ||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  3853 tgttcaggttgttgaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 3789  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 33516 - 33476
Alignment:
Q  107 tcaaccaatctaaggtaagggtgggactaactttctctaat 147  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  33516 tcaatcaatctaaggtaagggtgggactaaccttctttaat 33476  T

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