View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0767_low_1 (Length: 646)

Name: NF0767_low_1
Description: NF0767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0767_low_1
NF0767_low_1
[»] chr6 (54 HSPs)
chr6 (333-618)||(35019682-35019975)
chr6 (372-618)||(13404352-13404600)
chr6 (478-618)||(13616346-13616486)
chr6 (478-618)||(34801609-34801750)
chr6 (123-222)||(35020092-35020191)
chr6 (478-594)||(32026091-32026207)
chr6 (478-618)||(32691290-32691430)
chr6 (489-618)||(29076162-29076291)
chr6 (489-618)||(29109695-29109824)
chr6 (489-618)||(29111135-29111264)
chr6 (67-206)||(32026484-32026623)
chr6 (67-206)||(32036543-32036682)
chr6 (67-206)||(6206575-6206714)
chr6 (67-206)||(11693542-11693681)
chr6 (67-206)||(27641265-27641404)
chr6 (67-206)||(13404019-13404158)
chr6 (488-618)||(14124556-14124686)
chr6 (67-206)||(29067683-29067822)
chr6 (67-206)||(29109272-29109411)
chr6 (67-222)||(32691553-32691709)
chr6 (478-578)||(27641546-27641646)
chr6 (123-222)||(13616738-13616837)
chr6 (67-206)||(34802037-34802183)
chr6 (489-618)||(29068104-29068233)
chr6 (489-618)||(29083351-29083480)
chr6 (372-618)||(11693759-11693995)
chr6 (504-618)||(6206914-6207028)
chr6 (372-438)||(29111031-29111097)
chr6 (333-381)||(13404291-13404339)
chr6 (68-206)||(14123917-14124054)
chr6 (372-428)||(29076059-29076115)
chr6 (490-558)||(30763482-30763550)
chr6 (487-554)||(12398521-12398588)
chr6 (342-381)||(13616592-13616631)
chr6 (342-381)||(29076007-29076046)
chr6 (342-381)||(29110979-29111018)
chr6 (333-381)||(32026303-32026351)
chr6 (342-381)||(29067955-29067994)
chr6 (342-381)||(29083201-29083240)
chr6 (342-381)||(29109544-29109583)
chr6 (342-381)||(34801855-34801894)
chr6 (63-109)||(14485934-14485980)
chr6 (372-425)||(13616517-13616570)
chr6 (372-425)||(32691459-32691512)
chr6 (67-114)||(13616852-13616899)
chr6 (373-412)||(29068008-29068047)
chr6 (373-412)||(29083254-29083293)
chr6 (373-412)||(29109597-29109636)
chr6 (372-414)||(6206792-6206834)
chr6 (372-414)||(32026248-32026290)
chr6 (372-414)||(34801800-34801842)
chr6 (409-442)||(14124491-14124524)
chr6 (333-381)||(14124153-14124201)
chr6 (333-381)||(14124288-14124336)
[»] chr3 (111 HSPs)
chr3 (342-618)||(55267521-55267808)
chr3 (368-618)||(41805392-41805642)
chr3 (333-618)||(55205373-55205672)
chr3 (68-222)||(34646066-34646220)
chr3 (485-618)||(52567864-52567997)
chr3 (478-618)||(34691731-34691871)
chr3 (372-618)||(24700827-24701062)
chr3 (372-554)||(41579456-41579638)
chr3 (67-206)||(45099330-45099469)
chr3 (478-619)||(44490450-44490591)
chr3 (372-618)||(50998386-50998622)
chr3 (478-618)||(2267161-2267301)
chr3 (67-206)||(36136115-36136254)
chr3 (67-206)||(51694415-51694554)
chr3 (67-222)||(55205787-55205941)
chr3 (67-222)||(55267924-55268079)
chr3 (478-594)||(43571511-43571627)
chr3 (67-206)||(13894766-13894905)
chr3 (485-618)||(45098910-45099043)
chr3 (372-554)||(46345096-46345276)
chr3 (478-618)||(2645561-2645701)
chr3 (478-618)||(44223127-44223266)
chr3 (497-618)||(19440362-19440483)
chr3 (67-205)||(43478229-43478367)
chr3 (67-204)||(43571084-43571222)
chr3 (372-618)||(51693984-51694221)
chr3 (67-206)||(52568301-52568439)
chr3 (478-618)||(4002819-4002958)
chr3 (67-206)||(4003132-4003272)
chr3 (67-206)||(7247261-7247401)
chr3 (479-578)||(36136427-36136526)
chr3 (71-222)||(46345449-46345601)
chr3 (489-618)||(49217196-49217325)
chr3 (67-208)||(2267462-2267603)
chr3 (478-610)||(34645674-34645805)
chr3 (67-206)||(2645855-2645994)
chr3 (67-206)||(3494003-3494142)
chr3 (67-206)||(3497697-3497836)
chr3 (67-206)||(34050828-34050967)
chr3 (67-206)||(49139033-49139172)
chr3 (67-206)||(54391543-54391682)
chr3 (67-222)||(34692141-34692302)
chr3 (489-618)||(43478667-43478797)
chr3 (67-206)||(46406106-46406245)
chr3 (67-206)||(49217608-49217747)
chr3 (372-578)||(3493730-3493927)
chr3 (372-578)||(3497424-3497621)
chr3 (67-206)||(41579127-41579272)
chr3 (478-578)||(13894372-13894472)
chr3 (67-184)||(2429686-2429802)
chr3 (478-553)||(2430105-2430180)
chr3 (478-556)||(7247698-7247776)
chr3 (490-618)||(16484294-16484423)
chr3 (67-206)||(49611356-49611492)
chr3 (124-206)||(24701255-24701337)
chr3 (372-618)||(46406323-46406559)
chr3 (478-618)||(34051141-34051281)
chr3 (504-618)||(2950471-2950585)
chr3 (490-618)||(20374327-20374445)
chr3 (372-618)||(49138719-49138955)
chr3 (372-428)||(49611680-49611736)
chr3 (487-558)||(51017020-51017091)
chr3 (372-442)||(7247603-7247673)
chr3 (333-381)||(43571357-43571405)
chr3 (372-424)||(45099086-45099138)
chr3 (487-554)||(34470483-34470550)
chr3 (487-558)||(44929199-44929270)
chr3 (502-557)||(50457665-50457720)
chr3 (372-425)||(34691917-34691970)
chr3 (372-618)||(54391760-54391996)
chr3 (333-381)||(7247533-7247581)
chr3 (333-381)||(43478493-43478541)
chr3 (333-381)||(45099151-45099199)
chr3 (333-381)||(51694234-51694282)
chr3 (487-618)||(18441959-18442090)
chr3 (487-618)||(19487033-19487164)
chr3 (342-381)||(44223371-44223410)
chr3 (342-381)||(46345289-46345328)
chr3 (342-381)||(52568128-52568167)
chr3 (333-381)||(20374657-20374705)
chr3 (333-381)||(49217435-49217483)
chr3 (333-381)||(49611619-49611667)
chr3 (342-381)||(13894595-13894634)
chr3 (487-618)||(27096093-27096224)
chr3 (342-381)||(34645930-34645969)
chr3 (487-554)||(42321897-42321964)
chr3 (372-425)||(2645730-2645783)
chr3 (497-558)||(49275133-49275194)
chr3 (372-425)||(52568053-52568106)
chr3 (67-115)||(20374929-20374977)
chr3 (402-442)||(27096254-27096294)
chr3 (333-381)||(34691983-34692031)
chr3 (497-552)||(8397736-8397791)
chr3 (67-183)||(27096574-27096690)
chr3 (372-463)||(43478554-43478638)
chr3 (372-407)||(44490633-44490668)
chr3 (67-97)||(27188290-27188320)
chr3 (372-414)||(34051045-34051087)
chr3 (372-414)||(44223307-44223349)
chr3 (372-425)||(2267334-2267387)
chr3 (67-177)||(10052247-10052357)
chr3 (333-369)||(2429946-2429982)
chr3 (372-465)||(2430010-2430094)
chr3 (67-115)||(11377933-11377981)
chr3 (67-115)||(14632684-14632732)
chr3 (333-381)||(24701075-24701123)
chr3 (67-115)||(34471013-34471061)
chr3 (378-414)||(36136336-36136372)
chr3 (67-115)||(42322360-42322408)
chr3 (363-391)||(44929075-44929103)
chr3 (67-115)||(49274636-49274684)
[»] chr4 (84 HSPs)
chr4 (333-618)||(6280963-6281260)
chr4 (65-222)||(6281366-6281525)
chr4 (372-618)||(39590300-39590535)
chr4 (478-618)||(51426642-51426784)
chr4 (478-618)||(28083818-28083958)
chr4 (478-618)||(33383910-33384050)
chr4 (478-618)||(34528270-34528410)
chr4 (67-204)||(34528681-34528818)
chr4 (478-618)||(44558754-44558894)
chr4 (481-604)||(49422209-49422332)
chr4 (67-197)||(1043932-1044062)
chr4 (478-618)||(34151719-34151860)
chr4 (372-554)||(37959454-37959634)
chr4 (478-618)||(955896-956036)
chr4 (478-618)||(21015844-21015984)
chr4 (372-618)||(1044265-1044512)
chr4 (67-208)||(49572309-49572450)
chr4 (68-204)||(49422620-49422755)
chr4 (67-206)||(37867659-37867798)
chr4 (67-206)||(34152146-34152284)
chr4 (67-206)||(44559187-44559325)
chr4 (478-616)||(49572729-49572866)
chr4 (489-618)||(37868107-37868236)
chr4 (67-222)||(39589968-39590129)
chr4 (67-206)||(40352755-40352896)
chr4 (67-206)||(6176296-6176435)
chr4 (67-206)||(21016158-21016297)
chr4 (489-618)||(9491123-9491252)
chr4 (372-618)||(41793469-41793705)
chr4 (489-618)||(56140529-56140658)
chr4 (478-618)||(40352441-40352581)
chr4 (67-204)||(41793785-41793922)
chr4 (67-206)||(956312-956452)
chr4 (67-206)||(51427061-51427199)
chr4 (478-618)||(55799357-55799497)
chr4 (67-206)||(49095832-49095972)
chr4 (372-442)||(49572632-49572702)
chr4 (67-206)||(9490674-9490815)
chr4 (481-618)||(4783751-4783885)
chr4 (372-439)||(49422366-49422433)
chr4 (372-442)||(56140424-56140494)
chr4 (67-184)||(56140102-56140220)
chr4 (372-618)||(6175982-6176218)
chr4 (372-618)||(49096050-49096286)
chr4 (123-206)||(4784195-4784278)
chr4 (487-557)||(51026220-51026290)
chr4 (123-204)||(37959182-37959263)
chr4 (333-381)||(1044204-1044252)
chr4 (333-381)||(9490948-9490996)
chr4 (333-381)||(34151964-34152012)
chr4 (333-381)||(37867930-37867978)
chr4 (333-381)||(44559005-44559053)
chr4 (333-381)||(51426879-51426927)
chr4 (333-381)||(56140363-56140411)
chr4 (342-381)||(956141-956180)
chr4 (487-558)||(9718977-9719048)
chr4 (342-381)||(37959402-37959441)
chr4 (508-558)||(43887664-43887714)
chr4 (333-381)||(4784013-4784061)
chr4 (71-115)||(21410929-21410973)
chr4 (71-115)||(21412473-21412517)
chr4 (333-381)||(33384146-33384194)
chr4 (67-115)||(55797830-55797878)
chr4 (342-381)||(9718737-9718776)
chr4 (501-544)||(22438370-22438413)
chr4 (342-381)||(34528513-34528552)
chr4 (487-554)||(36774879-36774946)
chr4 (67-106)||(42887488-42887527)
chr4 (342-381)||(49422446-49422485)
chr4 (372-414)||(33384091-33384133)
chr4 (372-414)||(34528458-34528500)
chr4 (502-554)||(2774751-2774804)
chr4 (372-425)||(21016027-21016080)
chr4 (506-558)||(8866918-8866970)
chr4 (372-465)||(9491009-9491094)
chr4 (67-106)||(4784302-4784341)
chr4 (487-558)||(4909987-4910058)
chr4 (123-182)||(42887550-42887609)
chr4 (372-414)||(956077-956119)
chr4 (372-414)||(44558941-44558983)
chr4 (497-554)||(24076708-24076765)
chr4 (372-425)||(40352624-40352677)
chr4 (67-184)||(4910517-4910634)
chr4 (67-115)||(21170688-21170736)
[»] chr1 (87 HSPs)
chr1 (346-618)||(49924962-49925241)
chr1 (372-618)||(49398191-49398437)
chr1 (378-618)||(49428890-49429129)
chr1 (484-618)||(51271424-51271558)
chr1 (372-618)||(36911415-36911664)
chr1 (67-222)||(49925291-49925446)
chr1 (478-617)||(41803861-41804000)
chr1 (372-618)||(29760609-29760857)
chr1 (478-618)||(42570228-42570368)
chr1 (67-206)||(49428548-49428687)
chr1 (67-206)||(36911089-36911230)
chr1 (372-618)||(19161997-19162234)
chr1 (478-618)||(26633632-26633773)
chr1 (521-618)||(29437890-29437987)
chr1 (478-618)||(14172193-14172333)
chr1 (67-222)||(14172599-14172757)
chr1 (67-222)||(26634043-26634205)
chr1 (372-618)||(6437261-6437507)
chr1 (67-206)||(48227720-48227859)
chr1 (67-206)||(51271012-51271151)
chr1 (75-206)||(44336776-44336907)
chr1 (67-206)||(49397855-49397994)
chr1 (478-618)||(13633971-13634111)
chr1 (490-618)||(44598745-44598873)
chr1 (68-199)||(13974136-13974268)
chr1 (478-556)||(18974958-18975036)
chr1 (333-438)||(29437413-29437527)
chr1 (67-206)||(41803435-41803574)
chr1 (489-618)||(27485139-27485267)
chr1 (65-204)||(27485581-27485722)
chr1 (123-206)||(6436989-6437072)
chr1 (373-448)||(42570375-42570450)
chr1 (67-206)||(29437142-29437280)
chr1 (67-206)||(35525056-35525194)
chr1 (509-618)||(48228169-48228279)
chr1 (372-618)||(44336355-44336591)
chr1 (484-553)||(46141937-46142006)
chr1 (67-206)||(46142307-46142452)
chr1 (71-206)||(13634277-13634412)
chr1 (372-442)||(14172356-14172426)
chr1 (486-558)||(13148889-13148961)
chr1 (67-184)||(29761062-29761177)
chr1 (67-206)||(42570646-42570788)
chr1 (123-221)||(13284687-13284785)
chr1 (68-206)||(24362924-24363063)
chr1 (372-442)||(46142035-46142105)
chr1 (487-554)||(14440872-14440939)
chr1 (123-206)||(18974591-18974674)
chr1 (372-439)||(26633802-26633869)
chr1 (485-587)||(24362426-24362524)
chr1 (502-558)||(38043616-38043672)
chr1 (478-545)||(35524907-35524974)
chr1 (478-524)||(29437551-29437597)
chr1 (497-554)||(33285860-33285917)
chr1 (502-558)||(39855655-39855712)
chr1 (333-381)||(13974408-13974456)
chr1 (333-381)||(29760871-29760919)
chr1 (333-381)||(46142127-46142175)
chr1 (333-381)||(51271284-51271332)
chr1 (342-381)||(6437200-6437239)
chr1 (342-381)||(18974798-18974837)
chr1 (487-554)||(23344242-23344309)
chr1 (342-381)||(26633891-26633930)
chr1 (342-381)||(36911363-36911402)
chr1 (487-554)||(49260097-49260164)
chr1 (344-381)||(41803718-41803755)
chr1 (333-381)||(14172439-14172487)
chr1 (333-381)||(24362755-24362803)
chr1 (333-381)||(27485398-27485446)
chr1 (342-381)||(44336604-44336643)
chr1 (342-381)||(48227995-48228034)
chr1 (153-206)||(19162310-19162363)
chr1 (123-184)||(26494728-26494789)
chr1 (372-425)||(27485323-27485376)
chr1 (502-557)||(13285198-13285253)
chr1 (67-106)||(26494667-26494706)
chr1 (372-414)||(13974469-13974511)
chr1 (411-465)||(18974890-18974943)
chr1 (67-109)||(23343726-23343768)
chr1 (333-371)||(42570474-42570512)
chr1 (489-541)||(13974563-13974616)
chr1 (517-558)||(14771289-14771330)
chr1 (372-413)||(51271345-51271386)
chr1 (71-115)||(12790226-12790270)
chr1 (67-115)||(15355737-15355785)
chr1 (67-115)||(35585855-35585903)
chr1 (373-442)||(41803778-41803839)
[»] chr8 (50 HSPs)
chr8 (333-618)||(40703833-40704127)
chr8 (372-618)||(28168324-28168570)
chr8 (333-618)||(42604919-42605202)
chr8 (333-618)||(41855469-41855731)
chr8 (67-222)||(41855843-41855998)
chr8 (372-618)||(22550596-22550832)
chr8 (123-222)||(40703618-40703717)
chr8 (372-618)||(41016519-41016755)
chr8 (67-206)||(41276274-41276413)
chr8 (68-206)||(24862546-24862684)
chr8 (372-554)||(18438793-18438980)
chr8 (67-206)||(15031302-15031441)
chr8 (372-554)||(38872672-38872845)
chr8 (67-222)||(42604650-42604803)
chr8 (65-204)||(41016833-41016972)
chr8 (67-206)||(45065876-45066015)
chr8 (489-618)||(26455514-26455643)
chr8 (67-204)||(18439162-18439299)
chr8 (478-618)||(45066189-45066329)
chr8 (1-67)||(42467167-42467233)
chr8 (489-618)||(41276724-41276853)
chr8 (478-618)||(15030989-15031128)
chr8 (67-206)||(38872355-38872495)
chr8 (67-206)||(484235-484374)
chr8 (372-618)||(483921-484157)
chr8 (67-206)||(22550265-22550402)
chr8 (489-618)||(44052064-44052193)
chr8 (123-206)||(28168068-28168151)
chr8 (67-206)||(44051631-44051773)
chr8 (376-442)||(44051964-44052030)
chr8 (333-381)||(26455336-26455384)
chr8 (487-554)||(38032380-38032447)
chr8 (372-425)||(24862878-24862931)
chr8 (333-381)||(24862817-24862865)
chr8 (502-558)||(26488200-26488256)
chr8 (333-381)||(28168263-28168311)
chr8 (333-381)||(41276546-41276594)
chr8 (487-554)||(19241147-19241214)
chr8 (487-554)||(19314331-19314398)
chr8 (67-114)||(28168002-28168049)
chr8 (504-558)||(31170581-31170635)
chr8 (502-554)||(26488318-26488370)
chr8 (333-381)||(44051906-44051954)
chr8 (342-381)||(18438993-18439032)
chr8 (478-531)||(14120404-14120457)
chr8 (372-414)||(26455406-26455448)
chr8 (372-414)||(41276616-41276658)
chr8 (372-414)||(45066093-45066135)
chr8 (342-375)||(14120301-14120334)
chr8 (66-106)||(40703559-40703599)
[»] chr2 (63 HSPs)
chr2 (333-616)||(41497580-41497852)
chr2 (478-618)||(40675843-40675982)
chr2 (372-578)||(3942914-3943118)
chr2 (478-618)||(23786230-23786371)
chr2 (67-222)||(41497963-41498118)
chr2 (65-208)||(2918223-2918366)
chr2 (486-618)||(8268585-8268717)
chr2 (372-618)||(35493074-35493309)
chr2 (478-618)||(43493112-43493252)
chr2 (372-554)||(2917842-2918022)
chr2 (67-206)||(16583014-16583155)
chr2 (478-618)||(23409332-23409469)
chr2 (67-206)||(22002916-22003055)
chr2 (68-206)||(43492665-43492803)
chr2 (67-206)||(3942591-3942730)
chr2 (478-616)||(19470065-19470202)
chr2 (67-222)||(28476596-28476757)
chr2 (67-206)||(23408925-23409065)
chr2 (67-206)||(3936282-3936421)
chr2 (67-206)||(17425880-17426019)
chr2 (67-206)||(43983816-43983955)
chr2 (372-618)||(3935968-3936204)
chr2 (372-618)||(17426097-17426333)
chr2 (478-618)||(22003229-22003369)
chr2 (67-204)||(35492736-35492877)
chr2 (67-206)||(19470482-19470621)
chr2 (478-618)||(28476895-28477035)
chr2 (67-206)||(23786643-23786787)
chr2 (489-578)||(16583432-16583522)
chr2 (478-563)||(39798603-39798688)
chr2 (490-554)||(14181673-14181737)
chr2 (489-618)||(29090681-29090811)
chr2 (67-206)||(39798846-39798985)
chr2 (489-618)||(34639152-34639281)
chr2 (478-618)||(43984129-43984269)
chr2 (67-204)||(40676277-40676418)
chr2 (333-381)||(35493004-35493052)
chr2 (411-465)||(43493037-43493091)
chr2 (497-554)||(10358966-10359023)
chr2 (342-381)||(3942862-3942901)
chr2 (487-558)||(23719511-23719582)
chr2 (487-558)||(24107183-24107254)
chr2 (487-554)||(34520135-34520202)
chr2 (342-380)||(16583266-16583304)
chr2 (497-558)||(17537320-17537381)
chr2 (333-381)||(2918044-2918092)
chr2 (333-381)||(19470301-19470349)
chr2 (487-551)||(37311135-37311199)
chr2 (333-381)||(43492936-43492984)
chr2 (342-377)||(23409196-23409231)
chr2 (342-381)||(23786472-23786511)
chr2 (342-381)||(40676094-40676133)
chr2 (372-414)||(23409248-23409290)
chr2 (372-414)||(23786417-23786459)
chr2 (67-105)||(33404960-33404998)
chr2 (67-177)||(17537799-17537909)
chr2 (502-554)||(5422072-5422124)
chr2 (67-179)||(16413162-16413274)
chr2 (372-414)||(8268495-8268537)
chr2 (372-414)||(16583327-16583369)
chr2 (372-414)||(19470246-19470288)
chr2 (372-414)||(22003133-22003175)
chr2 (67-115)||(37311593-37311641)
[»] chr5 (71 HSPs)
chr5 (372-618)||(541032-541266)
chr5 (372-618)||(41798924-41799170)
chr5 (485-618)||(25499722-25499855)
chr5 (478-618)||(34682362-34682502)
chr5 (65-204)||(8539063-8539198)
chr5 (372-618)||(5901-6137)
chr5 (67-220)||(18309468-18309622)
chr5 (478-618)||(8539371-8539510)
chr5 (67-206)||(3602549-3602688)
chr5 (67-222)||(8575108-8575262)
chr5 (67-206)||(25499289-25499428)
chr5 (372-554)||(3602881-3603062)
chr5 (478-618)||(8574826-8574966)
chr5 (67-222)||(11347889-11348048)
chr5 (478-618)||(11348329-11348469)
chr5 (372-556)||(20199879-20200065)
chr5 (67-222)||(35566479-35566634)
chr5 (67-206)||(6212-6351)
chr5 (67-206)||(11028536-11028675)
chr5 (67-206)||(19035657-19035796)
chr5 (67-206)||(30710688-30710827)
chr5 (372-618)||(19035343-19035579)
chr5 (68-206)||(41202262-41202400)
chr5 (478-554)||(18309885-18309961)
chr5 (123-206)||(541440-541523)
chr5 (478-612)||(41201839-41201973)
chr5 (478-563)||(11028832-11028917)
chr5 (372-618)||(27660045-27660281)
chr5 (67-206)||(34682779-34682928)
chr5 (478-563)||(38855539-38855624)
chr5 (67-206)||(27660358-27660498)
chr5 (478-578)||(30710988-30711088)
chr5 (67-222)||(1399147-1399302)
chr5 (67-206)||(35926939-35927081)
chr5 (489-615)||(35926466-35926592)
chr5 (67-222)||(38855243-38855404)
chr5 (123-206)||(20199611-20199694)
chr5 (487-558)||(6791887-6791958)
chr5 (378-523)||(35566812-35566955)
chr5 (411-465)||(1398890-1398944)
chr5 (333-381)||(3602820-3602868)
chr5 (333-381)||(11348163-11348211)
chr5 (333-381)||(34682597-34682645)
chr5 (487-555)||(36348798-36348866)
chr5 (487-551)||(40937159-40937223)
chr5 (342-381)||(541279-541318)
chr5 (342-381)||(41202082-41202121)
chr5 (333-381)||(1398987-1399035)
chr5 (371-423)||(8575011-8575063)
chr5 (333-381)||(30887096-30887144)
chr5 (502-554)||(41088303-41088355)
chr5 (487-554)||(1696461-1696528)
chr5 (378-421)||(41202011-41202054)
chr5 (372-414)||(34682542-34682584)
chr5 (342-380)||(35566745-35566783)
chr5 (372-425)||(30710906-30710959)
chr5 (161-206)||(30886918-30886963)
chr5 (372-425)||(30887166-30887219)
chr5 (333-378)||(35926760-35926805)
chr5 (344-381)||(41799183-41799220)
chr5 (502-554)||(7483927-7483979)
chr5 (487-554)||(1973095-1973162)
chr5 (371-414)||(11028743-11028786)
chr5 (67-106)||(20199548-20199587)
chr5 (487-554)||(23190679-23190746)
chr5 (342-381)||(25499560-25499599)
chr5 (373-414)||(18309804-18309845)
chr5 (530-618)||(30887256-30887345)
chr5 (581-618)||(35566958-35566995)
chr5 (373-414)||(38855452-38855493)
chr5 (67-115)||(6792399-6792447)
[»] chr7 (79 HSPs)
chr7 (478-618)||(28112888-28113028)
chr7 (372-545)||(46860679-46860850)
chr7 (372-618)||(10524059-10524299)
chr7 (478-618)||(34142486-34142626)
chr7 (478-618)||(46596991-46597129)
chr7 (478-618)||(36392230-36392371)
chr7 (478-618)||(45257858-45257998)
chr7 (67-206)||(28978094-28978233)
chr7 (67-206)||(34142060-34142199)
chr7 (67-206)||(41623290-41623429)
chr7 (372-614)||(17840622-17840854)
chr7 (478-618)||(48194459-48194599)
chr7 (67-206)||(17840408-17840547)
chr7 (67-206)||(40589946-40590085)
chr7 (71-206)||(34157890-34158027)
chr7 (478-618)||(15309803-15309943)
chr7 (485-616)||(33603308-33603439)
chr7 (123-222)||(36392658-36392757)
chr7 (67-206)||(42683612-42683754)
chr7 (67-206)||(9366098-9366237)
chr7 (67-206)||(20565848-20565987)
chr7 (67-206)||(45362154-45362293)
chr7 (67-204)||(28113266-28113406)
chr7 (485-578)||(28977703-28977796)
chr7 (489-618)||(45361729-45361858)
chr7 (400-554)||(48314832-48314984)
chr7 (478-618)||(20566161-20566301)
chr7 (67-204)||(42504238-42504375)
chr7 (67-204)||(48271860-48271997)
chr7 (478-554)||(48272283-48272359)
chr7 (67-206)||(10225279-10225421)
chr7 (67-184)||(1641565-1641682)
chr7 (494-618)||(15070460-15070584)
chr7 (522-618)||(34139600-34139696)
chr7 (486-554)||(42684043-42684111)
chr7 (68-206)||(46861054-46861194)
chr7 (492-618)||(40590391-40590517)
chr7 (478-544)||(41623712-41623778)
chr7 (125-206)||(21186148-21186229)
chr7 (478-554)||(21185794-21185870)
chr7 (478-618)||(42503922-42504062)
chr7 (372-439)||(36392394-36392461)
chr7 (372-618)||(9365784-9366020)
chr7 (67-184)||(48194174-48194291)
chr7 (373-442)||(28113050-28113119)
chr7 (485-544)||(10225699-10225758)
chr7 (333-381)||(10225538-10225586)
chr7 (490-554)||(20876484-20876548)
chr7 (502-554)||(22292588-22292640)
chr7 (333-381)||(28977913-28977961)
chr7 (333-381)||(48194305-48194353)
chr7 (487-554)||(1641045-1641112)
chr7 (342-381)||(21185976-21186015)
chr7 (342-381)||(40590218-40590257)
chr7 (342-381)||(42683887-42683926)
chr7 (333-381)||(34142333-34142381)
chr7 (502-554)||(43349809-43349861)
chr7 (333-381)||(46860872-46860920)
chr7 (487-558)||(4231093-4231164)
chr7 (342-381)||(28113133-28113172)
chr7 (342-381)||(36392483-36392522)
chr7 (495-554)||(42736713-42736772)
chr7 (342-381)||(45361990-45362029)
chr7 (372-425)||(28977846-28977899)
chr7 (392-465)||(48272194-48272266)
chr7 (507-554)||(17184926-17184973)
chr7 (67-114)||(21186247-21186294)
chr7 (560-618)||(10225753-10225811)
chr7 (68-106)||(15900367-15900405)
chr7 (372-414)||(21185912-21185954)
chr7 (372-414)||(34142394-34142436)
chr7 (342-380)||(41623563-41623601)
chr7 (372-414)||(42683948-42683990)
chr7 (372-414)||(48194366-48194408)
chr7 (67-112)||(36392776-36392821)
chr7 (372-442)||(41623624-41623686)
chr7 (372-425)||(42504105-42504158)
chr7 (67-115)||(17184408-17184456)
chr7 (67-115)||(42736199-42736247)
[»] scaffold0176 (5 HSPs)
scaffold0176 (478-618)||(3411-3551)
scaffold0176 (67-206)||(2985-3124)
scaffold0176 (372-618)||(389-621)
scaffold0176 (333-381)||(3258-3306)
scaffold0176 (372-414)||(3319-3361)
[»] scaffold0192 (3 HSPs)
scaffold0192 (372-554)||(16561-16741)
scaffold0192 (333-380)||(16764-16811)
scaffold0192 (125-206)||(16945-17025)
[»] scaffold0199 (1 HSPs)
scaffold0199 (479-618)||(10783-10922)
[»] scaffold0094 (1 HSPs)
scaffold0094 (478-618)||(32-172)
[»] scaffold0014 (1 HSPs)
scaffold0014 (478-618)||(84685-84825)
[»] scaffold0494 (2 HSPs)
scaffold0494 (478-618)||(5436-5576)
scaffold0494 (67-208)||(5701-5842)
[»] scaffold0859 (2 HSPs)
scaffold0859 (67-184)||(1545-1662)
scaffold0859 (487-554)||(2004-2071)
[»] scaffold0618 (3 HSPs)
scaffold0618 (372-554)||(4044-4228)
scaffold0618 (71-222)||(4400-4555)
scaffold0618 (342-381)||(4241-4280)


Alignment Details
Target: chr6 (Bit Score: 166; Significance: 2e-88; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 333 - 618
Target Start/End: Complemental strand, 35019975 - 35019682
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaatt---------ctaacctaaactatcctcacatatcattaaatcataaaatcaa 423  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||||||||||||||||||||||||    
T  35019975 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattataaccattctaacctaaactatcctaacatatcattaaatcataaaatcaa 35019876  T
Q  424 taaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttac 523  Q
    |||||| |||||||||||| |||| ||||||||| |||||||            ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35019875 taaaacctatataatcgaacctatgtaattgaaatttaacaa-aaaaatacaaacaatttgaccacaaaacaacaatgcaataggattcaaaaaacttac 35019777  T
Q  524 ttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| |||||||||||||    
T  35019776 ttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaaggagaatcaaaaacgcaacaatggagttttggaaact 35019682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 13404352 - 13404600
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||| |||||| ||||| ||||||||| |||| |||||||          
T  13404352 ctaacaattttaacctaaactatcctaacatatcataaaatcataaaattaataaaacctatata-tcgaacctatataatcgaaatttaacaacaaaaa 13404450  T
Q  472 nnnnnn---caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctt 568  Q
             ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| ||      
T  13404451 aaaaacaaacaattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgatttaaattggattggaatgacttggaatggcag 13404550  T
Q  569 aaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||| ||||  | |||||| ||||  ||||||||| |||||||||||||    
T  13404551 aaaattgcacctaagagaatgaaaaccgcaacaatggagttttggaaact 13404600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 13616486 - 13616346
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |  ||||||||    
T  13616486 caattcgaccgcaaaacaacaatgcaataggatttaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaattgttcgaaatcgca 13616387  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    | ||||| ||||||||| ||||||||| |||||||||||||    
T  13616386 ccaaggataataaaaaacgcaacaatggagttttggaaact 13616346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 34801750 - 34801609
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttt-tgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgc 576  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||| ||||||||    
T  34801750 caattcgaccacaaaacaagaatgcaataggattcaaaaaacttactttttttgtgtgattgaaattggcttggaatggcttcaaattgctcaaaatcgc 34801651  T
Q  577 acgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||  |||||||||||||| | ||||||| ||||||| |||||    
T  34801650 acctaggagaataaaaaacgtaacaatggagttttgaaaact 34801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 35020191 - 35020092
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  35020191 cggaaccatcacaaacaattatgtgccacgtcataggtgatttttctttgttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 35020092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 594
Target Start/End: Complemental strand, 32026207 - 32026091
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| |||||||| |||||||||    
T  32026207 caattcgaccacaaaacaacaattcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatagcttgaaattgctcaaaatcgca 32026108  T
Q  578 cgaaggagaataaaaaa 594  Q
    |  |||||||| |||||    
T  32026107 cctaggagaatcaaaaa 32026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 32691430 - 32691290
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||  || |||||||||    
T  32691430 caattcgaccacaaagcaacaatacaataggattcaaaaaacttacttgtttttgtgattaaaattggcttgtaatgacttaaaatgactcaaaatcgca 32691331  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  32691330 ccttggataattaaaaacgcaacaatggagttttggaaact 32691290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 29076162 - 29076291
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||   |||||      
T  29076162 caaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaatcgcacttcggagatc 29076261  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  29076262 aaaaaacgtaacaatggagttttggaaact 29076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 29109695 - 29109824
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||   |||||      
T  29109695 caaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaatcgcacttcggagatc 29109794  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  29109795 aaaaaacgtaacaatggagttttggaaact 29109824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 29111135 - 29111264
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||   |||||      
T  29111135 caaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaatcgcacttcggagatc 29111234  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  29111235 aaaaaacgtaacaatggagttttggaaact 29111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 32026623 - 32026484
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||       | ||||||| ||||| ||||| |||||| |||||| | ||||||    
T  32026623 gctcctcctcaacctcgactaattgtacaccggcaccttcgaacccttctttttttcagaaccattacaaataatttcgtgccatgtcataggcgatttt 32026524  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||| |||||| ||| |||||||||||||||||    
T  32026523 tctttgttcttttcatcaccctgaacgttaccctgattct 32026484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 32036682 - 32036543
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||       | ||||||| ||||| ||||| |||||| |||||| | ||||||    
T  32036682 gctcctcctcaacctcgactaattgtacaccggcaccttcgaacccttctttttttcagaaccattacaaataatttcgtgccatgtcataggcgatttt 32036583  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||| |||||| ||| |||||||||||||||||    
T  32036582 tctttgttcttttcatcaccctgaacgttaccctgattct 32036543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 6206575 - 6206714
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  6206575 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 6206674  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  6206675 tcttttttcgtctcatcatcgtgaacgttaccctgattct 6206714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 11693542 - 11693681
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  11693542 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 11693641  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  11693642 tcttttttcgtctcatcatcgtgaacgttaccctgattct 11693681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 27641265 - 27641404
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   |||||||||||| |||| |||    
T  27641265 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattacatgccacgtcataggtgacttt 27641364  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | ||||||||| |||||||    
T  27641365 tcttttttcgtctcatcatcgtgaacgttaccttgattct 27641404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 13404019 - 13404158
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||        | |||||| | ||||||||  |||||| |||||| | ||||||    
T  13404019 gctcctcctcaacctcgactgattgtacatcggcaccttcgaacccttcttttttttgaaaccataaaaaacaattccgtgccatgtcataggcgatttt 13404118  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||  || |||||||||||||||||    
T  13404119 tctttgttcttctcatcacactgaacgttaccctgattct 13404158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 618
Target Start/End: Original strand, 14124556 - 14124686
Alignment:
Q  488 acaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaa 587  Q
    ||||||||||||| ||||| |||||| || || ||||||||||||||||||||||||| |||||||| ||| |||| ||| ||||||||||   ||||||    
T  14124556 acaaaacaacaatgcaataagattcagaacacgtacttgtttttgtgattgaaattggcttggaatggcttgaaatggctgaaaatcgcaccttggagaa 14124655  T
Q  588 taaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||| | ||||||  |||||||||||||    
T  14124656 taaaaaacgtaacaatagagttttggaaact 14124686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 29067683 - 29067822
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||| ||||||||||||| |||||||||||||  |||||| ||||||||       |||||||||| |||||||||  ||||||| ||||| | ||||||    
T  29067683 gctcatcctcaacctcgagtgattgtacaccgaaaccttcgaacccttctttttttcggaaccatcgcaaacaattccgtgccacatcataggcgatttt 29067782  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||| ||| ||| |||||||||||||||||    
T  29067783 tctttgttcttctcgtcaccctgaacgttaccctgattct 29067822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 29109272 - 29109411
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||| ||||||||||||| |||||||||||||  |||||| ||||||||       |||||||||| |||||||||  ||||||| ||||| | ||||||    
T  29109272 gctcatcctcaacctcgagtgattgtacaccgaaaccttcgaacccttctttttttcggaaccatcgcaaacaattccgtgccacatcataggcgatttt 29109371  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||| ||| ||| |||||||||||||||||    
T  29109372 tctttgttcttctcgtcaccctgaacgttaccctgattct 29109411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 32691709 - 32691553
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    |||||||||||||||| | | ||||||||| | ||||||| ||||||||        |||||||||| |||||||||   |||||||||||| || ||||    
T  32691709 gctcctcctcaacctcaagtaattgtacactgacaccttcgaacccttcttttttttcggaaccatcgcaaacaattccatgccacgtcataggtaattt 32691610  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||| |||||||||| ||| | ||||||||||||||||| |||||||||||||||    
T  32691609 ttcttttttcttctcattatcgtgaacgttaccctgattctgagacatatctacatt 32691553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 578
Target Start/End: Original strand, 27641546 - 27641646
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||||||||    
T  27641546 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgca 27641645  T
Q  578 c 578  Q
    |    
T  27641646 c 27641646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 13616837 - 13616738
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||||||||||||||||||||  ||||||| ||||| | |||||||||||||||||||||||| ||| |||||||| |||||| | ||||| |||||||||    
T  13616837 cggaaccatcacaaacaattccgtgccacatcataggcgatttttctttgttcttctcatcaccctgaacgttacactgattatgagacaaatctacatt 13616738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 34802183 - 34802037
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-------cggaaccatcacaaacaattttgtgccacgtcatatg 159  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||               |||||||||||||||||||| | ||||| |||||| |    
T  34802183 gctcctcctcaacctcgactgattgtacaccggcacctttgaacccttttttttttttttttccggaaccatcacaaacaattctttgccatgtcatagg 34802084  T
Q  160 tgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||| ||||||||||||||||||||| ||| || ||||||||||||||    
T  34802083 tgaattttctttgttcttctcatcaccctgaatgttaccctgattct 34802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 29068104 - 29068233
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||| |||| ||| |||  ||| ||||||||||   |||||      
T  29068104 caaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggcttgaaagagctcaaaatcgcaccttggagatc 29068203  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||| ||||||    
T  29068204 aaaaaacgtaacaatggagttttagaaact 29068233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 29083351 - 29083480
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||| |||| ||| |||  ||| ||||||||||   |||||      
T  29083351 caaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggcttgaaagagctcaaaatcgcaccttggagatc 29083450  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||| ||||||    
T  29083451 aaaaaacgtaacaatggagttttagaaact 29083480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 11693759 - 11693995
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  11693759 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 11693848  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  11693849 aacatacaattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 11693948  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  11693949 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 11693995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 618
Target Start/End: Original strand, 6206914 - 6207028
Alignment:
Q  504 ataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaat 603  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || ||||||||||     | ||| ||||| ||| ||||    
T  6206914 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttaaaaaattaaaaacgcatcaat 6207013  T
Q  604 gaagttttggaaact 618  Q
    |||||||||||||||    
T  6207014 gaagttttggaaact 6207028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 438
Target Start/End: Original strand, 29111031 - 29111097
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataat 438  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||  ||||||||    
T  29111031 ctaacaattctaacctaaactataataacatatcataaaatcataaaatcaataaaatctatataat 29111097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 13404291 - 13404339
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  13404291 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 13404339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 14123917 - 14124054
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    |||||||| ||||||||||||||||||| | |||||||| || |||||       |||| ||||||||    |||  |||||| |||||||| |||||||    
T  14123917 ctcctccttaacctcgactgattgtacatcagcaccttcgaatccttcttttga-cggacccatcacatgtgattccgtgccatgtcatatgcgattttt 14124015  T
Q  168 ctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||| |||||||||||| ||| |||||||||||| ||||    
T  14124016 ctttcttcttctcatcaccctgaacgttaccctggttct 14124054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 29076059 - 29076115
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaa 428  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||    
T  29076059 ctaacaattctaacctaaactataataacatatcataaaatcataaaatcaataaaa 29076115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 30763550 - 30763482
Alignment:
Q  490 aaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||| ||| |||||| ||||||||||||    
T  30763550 aaaaaaacaatgcaataggattcaaaacacttacttgattttgtgcttgtaattggcttggaatgactt 30763482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 12398521 - 12398588
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  12398521 cacaaaatagcaacacaataggattcaaaaaacttacttgattttgtgcttgaaattggctttgaatg 12398588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 13616631 - 13616592
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13616631 aattctacaacgattcatcaaaacctaaacctaacaattc 13616592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 29076007 - 29076046
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29076007 aattctacaacgattcatcaaaacctaaacctaacaattc 29076046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 29110979 - 29111018
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29110979 aattctacaacgattcatcaaaacctaaacctaacaattc 29111018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 32026351 - 32026303
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  32026351 aattctaacaattctacgacgattcatcaaaacctaaacctaacaattc 32026303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 29067955 - 29067994
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  29067955 aattctacaacgattcatcaaaacctaaacttaacaattc 29067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 29083201 - 29083240
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  29083201 aattctacaacgattcatcaaaacctaaacttaacaattc 29083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 29109544 - 29109583
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  29109544 aattctacaacgattcatcaaaacctaaacttaacaattc 29109583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 34801894 - 34801855
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  34801894 aattcaacaacgattcatcaaaacctaaacctaacaattc 34801855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 14485980 - 14485934
Alignment:
Q  63 ctctgctcctcctcaacctcgactgattgtacaccggcaccttcaaa 109  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  14485980 ctctgctcctcctcaacctggaatgattgtacactggcaccttcaaa 14485934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 13616570 - 13616517
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  13616570 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 13616517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 32691512 - 32691459
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  32691512 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 32691459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 13616899 - 13616852
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaaccctt 114  Q
    |||||||||||||||||| ||||||||||||| ||||| | |||||||    
T  13616899 gctcctcctcaacctcgagtgattgtacaccgacacctacgaaccctt 13616852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 412
Target Start/End: Original strand, 29068008 - 29068047
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaat 412  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  29068008 taacaattctaacctaaactatcctaacatatcataaaat 29068047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 412
Target Start/End: Original strand, 29083254 - 29083293
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaat 412  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  29083254 taacaattctaacctaaactatcctaacatatcataaaat 29083293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 412
Target Start/End: Original strand, 29109597 - 29109636
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaat 412  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  29109597 taacaattctaacctaaactatcctaacatatcataaaat 29109636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 6206792 - 6206834
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  6206792 ctaaccattctaacctaaactatcctaacatatcataaaatca 6206834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 32026290 - 32026248
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  32026290 ctaaccattctaacctaaactatcctaacatatcataaaatca 32026248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 34801842 - 34801800
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||    
T  34801842 ctaacaattctaacctaaagtatcctaacatatcataaaatca 34801800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 442
Target Start/End: Original strand, 14124491 - 14124524
Alignment:
Q  409 aaatcataaaatcaataaaacatatataatcgaa 442  Q
    ||||||||||||||||||||| ||||||||||||    
T  14124491 aaatcataaaatcaataaaacctatataatcgaa 14124524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 14124153 - 14124201
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| || | |||||||||||||||||||||||    
T  14124153 aattctaacaattctacaacaatccttcaaaacctaaacctaacaattc 14124201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 14124288 - 14124336
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| || | |||||||||||||||||||||||    
T  14124288 aattctaacaattctacaacaatccttcaaaacctaaacctaacaattc 14124336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 6e-85; HSPs: 111)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 342 - 618
Target Start/End: Complemental strand, 55267808 - 55267521
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaatt---------ctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacata 432  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  55267808 aattctacaacgattcatcaaaacctaaacctaacaattttaaccattctaacctaaactatcctaacatatcattaaatcataaaatcaataaaaccta 55267709  T
Q  433 tataatcgaatctatataattgaaagttaacaagnnnnnnnnnnn--caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttt 530  Q
    |||||||||| |||| ||||||||| |||||||              ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55267708 tataatcgaacctatgtaattgaaatttaacaaaaaaaacaaacaaacaatttgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttt 55267609  T
Q  531 tgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| |||||||||||||    
T  55267608 tgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaaggagaatcaaaaacgcaacaatggagttttggaaact 55267521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 368 - 618
Target Start/End: Original strand, 41805392 - 41805642
Alignment:
Q  368 aaacctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagn 467  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||      
T  41805392 aaacctaaccattctaacctaaactatcctaacatatcattaaatcataaaatcaataaaacctatataatcgaacctatgtaattgaaatttaacaaaa 41805491  T
Q  468 nnnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgct 567  Q
              ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41805492 aaaaaacaaacaatttggccacaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattgatttggaatgacttcaaattgct 41805591  T
Q  568 taaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
     |||||||||| |||||||||||||||  |||||||| |||||| ||||||    
T  41805592 caaaatcgcaccaaggagaataaaaaacacaacaatggagttttagaaact 41805642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 333 - 618
Target Start/End: Complemental strand, 55205672 - 55205373
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattctaacc---------taaactatcctcacatatcattaaatcataaaatcaa 423  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||         ||||||||||| |||||||||||||||||||||||||    
T  55205672 aattctaacaattctacaacgattcatcaaaacctaaacttaacaattctaaccattctaacctaaactatcctaacatatcattaaatcataaaatcaa 55205573  T
Q  424 taaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnnnnnn-----caatttgaccacaaaacaacaatacaataggattcaaaaaa 518  Q
    |||||| |||||||||||| |||| ||||||||| |||||||                 ||||||||||||||||||||||| |||||||||||||||||    
T  55205572 taaaacctatataatcgaacctatgtaattgaaatttaacaaaaaaaaaaaaaaacaaacaatttgaccacaaaacaacaatgcaataggattcaaaaaa 55205473  T
Q  519 cttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||| ||||||||    
T  55205472 cttacttgtttttgtgattaaaattggcttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttatggaaact 55205373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 34646220 - 34646066
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||| |||||| | |||||||    
T  34646220 ctcctcctcaacctcgattgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattttgtgccatgtcataggcgattttt 34646121  T
Q  168 ctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||||||||||||||||| | | ||||||||||||||||| |||||||||||||||    
T  34646120 ctttgttcttctcatcaccatgaacgttaccctgattctgagacatatctacatt 34646066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 485 - 618
Target Start/End: Complemental strand, 52567997 - 52567864
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaagga 584  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | |||||||| |||||    
T  52567997 accacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattgacttggaatgacttcaaattgctcacaatcgcaccaagga 52567898  T
Q  585 gaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||| ||||||||| |||||||||||||    
T  52567897 gaataaaaaacgcaacaatggagttttggaaact 52567864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 34691871 - 34691731
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  34691871 caattcgaccacaaaacaacaatgcaataggattcagaatacttacttgtttttgtgattgaaattagcttggaatgacttcaaattgctcaaaatcgca 34691772  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
      ||||||||| ||||| ||||||||| |||||||||||||    
T  34691771 gcaaggagaatcaaaaacgcaacaatggagttttggaaact 34691731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 24701062 - 24700827
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  24701062 ctaacaattctaacctaaattatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa--aaaa 24700974  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||| |||    
T  24700973 aacaaacaatttgaccacaaaacaacaatgcaataagattcaaaaaacttacttgtttttttgattgaatttggcttggaatgacttgaaattgctcaaa 24700874  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   |||||| |||||| ||||||||| |||||||||||||    
T  24700873 atcgcaccttggagaagaaaaaacgcaacaatggagttttggaaact 24700827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 372 - 554
Target Start/End: Original strand, 41579456 - 41579638
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||| ||||||||| |||| |||||||          
T  41579456 ctaacaattctaacctaaactatcctaacatatcataaaagcataaaatcaataaaacctatat-atcgaacctatataatcgaaatttaacaaaaaaaa 41579554  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattc-aaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
          ||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  41579555 aacaaacaattcgaccacaaaacaataatgcaataggattcaaaaaaacttacttgtttttgtgattgaaattggcttggaatg 41579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 45099469 - 45099330
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||| |||| || |||||| ||||||||    
T  45099469 gctcatcctcaacctcgactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgtcatgtcataggtgatttt 45099370  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  45099369 tctttgttcttctcatcaccctgaacgttaccctgattct 45099330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 478 - 619
Target Start/End: Complemental strand, 44490591 - 44490450
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||| ||    
T  44490591 caatttgaccacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgtcttgaaattgctcaaaatcaca 44490492  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaactg 619  Q
    |   |||||  |||||| | ||||||||||||||||||||||    
T  44490491 cattggagataaaaaaacgtaacaatgaagttttggaaactg 44490450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 50998386 - 50998622
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  50998386 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 50998475  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||    
T  50998476 aacaaacaatatgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaa 50998575  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||| ||||| ||||||||| |||||||||||||    
T  50998576 atcgcaccttggataatcaaaaacgcaacaatggagttttggaaact 50998622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 2267301 - 2267161
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||    
T  2267301 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgca 2267202  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  2267201 ccttggataatcaaaaacgcaacaatggagttttggaaact 2267161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 36136115 - 36136254
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       ||||| |||| |||||||||  ||||||||||||| ||||||||    
T  36136115 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaatcatcgcaaacaattccgtgccacgtcataggtgatttt 36136214  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  36136215 tctttgttcttctcatcaccctgaacgttaccctgattct 36136254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 51694554 - 51694415
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| ||||||||| |||||||||||||| | ||||||    
T  51694554 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattatgtgccacgtcataggcgatttt 51694455  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||| ||||||||| ||| |||||||||||||||||    
T  51694454 tctttgttattctcatcaccctgaacgttaccctgattct 51694415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 55205941 - 55205787
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||| |||||| ||| |||| |||        |||||||||||||||||||||||||||||||||| ||||||||    
T  55205941 gctcctcctcaacctcgaatgattgtacatcggcac-ttcgaacctttcttttttatggaaccatcacaaacaattttgtgccacgtcataggtgatttt 55205843  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||| ||| ||| ||||| ||||||| |||||||||||||||    
T  55205842 tctttgttcttctcatcaccctgaacattaccttgattctgagacatatctacatt 55205787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 55268079 - 55267924
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||  |||| ||        |||||||||||||||||||| |||||||| ||||| ||||||||    
T  55268079 gctcctcctcaacctcgagtgattgtacaccggcacctttgaaccttttttttttccggaaccatcacaaacaattctgtgccacatcataggtgatttt 55267980  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||||||||||||| ||||  || ||||||||||||||||| |||||||||||||||    
T  55267979 tctttgttcttcttatcactctgaacgttaccctgattctgagacatatctacatt 55267924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 478 - 594
Target Start/End: Original strand, 43571511 - 43571627
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||| |||||||||    
T  43571511 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttctgtgattgaaattgacttggaatggcttcaaattgctcaaaatcgca 43571610  T
Q  578 cgaaggagaataaaaaa 594  Q
    |  ||||||||||||||    
T  43571611 cctaggagaataaaaaa 43571627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 13894905 - 13894766
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       ||||||||||||||||||||| |||||||||||||   ||||||    
T  13894905 gctcctcctcaacctcgaatgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaatttcgtgccacgtcatagacgatttt 13894806  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| ||  |||||||||||||    
T  13894805 tctttgttcttctcatcaccctgaatattaccctgattct 13894766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 485 - 618
Target Start/End: Complemental strand, 45099043 - 45098910
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaagga 584  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||| ||| |||||||| ||||||||||  ||||    
T  45099043 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattgacttggaatggcttgaaattgctgaaaatcgcacatagga 45098944  T
Q  585 gaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||  |||||| | ||||||| |||||||||||||    
T  45098943 gatcaaaaaacgtaacaatggagttttggaaact 45098910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 372 - 554
Target Start/End: Complemental strand, 46345276 - 46345096
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||| |||||  |||||||| |||| |||| ||          
T  46345276 ctaacaattctaacctaaactattctaacatatcataaaatcataaaatcaataaaacctatata-tcgaacttatataatcgaaatttaaaaa-aaaaa 46345179  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
          ||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  46345178 aaaaaacaattcgaccacaaaacaacaatgcaataagattaaaaaaacttacttgtttttgtgattgaaattggcttggaatg 46345096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 2645701 - 2645561
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||  || ||||| |||    
T  2645701 caattcgaccacaaagcaacaatacaataggattcaaaaaacttacttgtttttgtgattaaaattggcttgtaatgacttcaaatgactcaaaattgca 2645602  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  2645601 ccttggataattaaaaacgcaacaatggagttttggaaact 2645561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 44223266 - 44223127
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||||||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| |||    
T  44223266 caatttgaccacaaaacaacaatgcgataagattaaaaaaacttacttgtttttgtgattgaaattggtttgaaatgacttgaaattactcaaaattgca 44223167  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    || ||||| || ||||||| ||||||  |||||||||||||    
T  44223166 cgtaggag-atcaaaaatgtaacaatagagttttggaaact 44223127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 497 - 618
Target Start/End: Complemental strand, 19440483 - 19440362
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatg 596  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||||  ||| ||| ||||||||||| ||||||||| || ||||||||||||||| |    
T  19440483 caatgcaataggattcacaaaagttacttgtttttgtgattgaaattgacttgaaattacttcaaattgtttaaaatcgtaccaaggagaataaaaaacg 19440384  T
Q  597 caacaatgaagttttggaaact 618  Q
    |||||||| |||||||||||||    
T  19440383 caacaatggagttttggaaact 19440362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 43478229 - 43478367
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| | ||||||| ||||||||       |||||||||| |||||||||| ||||||||||||| | ||||||    
T  43478229 gctcctcctcaacctcgagtgattgtacacagacaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttt 43478328  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattc 205  Q
    |||||||||||||||||| ||| ||||||||| ||||||    
T  43478329 tctttgttcttctcatcaccctgaacgttaccatgattc 43478367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 43571084 - 43571222
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||        ||||||||||||||||||||  |||||| |||||| | |||||    
T  43571084 gctcctcctcaacctcgactgattgtacatcggcaccttcgaacccttcttttttttcggaaccatcacaaacaattcagtgccatgtcataggcgattt 43571183  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  43571184 ttctttgttcttctcatcaccctgaacgttaccctgatt 43571222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 51694221 - 51693984
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||  |||||||||         || ||||| ||||||||| |||| |||||||          
T  51694221 ctaacaattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------tagtcgaacctatataatcgaaatttaacaaaaaaca 51694131  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          |||||| ||| |||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||  |||||||||||| |||| ||| |||    
T  51694130 aacaaacaatttaaccgcaaaacaacaatgcaataagattagaaaaacttacttgtttttgtgattgaaattgacttggaatgacttgaaatagctcaaa 51694031  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||||| ||||||||| ||||||| ||||||| |||||    
T  51694030 atcgcaccttggagattaaaaaatgtaacaatggagttttgaaaact 51693984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 52568439 - 52568301
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       | |||| |||||||||||||| |||||||||||||   ||||||    
T  52568439 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttt-ctgaactatcacaaacaatttcgtgccacgtcatagacgatttt 52568341  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  52568340 tctttgttcttctcatcaccctgaacgttaccctgattct 52568301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 4002958 - 4002819
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||||||||  || |||||||||    
T  4002958 caattcgaccacaaaacaacaatgcaataggattctaaaaacttacttgtttttgtgatt-aaattggcttggaataacttcaaatgactcaaaatcgca 4002860  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  4002859 ccttggataatcaaaaacgcaacaatggagttttggaaact 4002819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 4003272 - 4003132
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||        |||||||||||||||||||||  ||| |||| ||| | |||||    
T  4003272 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcacaaacaatttcatgcaacgttataggcgattt 4003173  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  4003172 ttctttgttcttctcatcaccctgaacgttaccctgattct 4003132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 7247261 - 7247401
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||        |||||||||| |||||||||||||| || |||||| | |||||    
T  7247261 gctcctcctcaacctggactgattgtacaccgacaccttcgaacccttcttttttttcggaaccatctcaaacaattttgtgtcatgtcataggcgattt 7247360  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  7247361 ttctttgttcttctcatcaccctgaacgttaccctgattct 7247401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 479 - 578
Target Start/End: Original strand, 36136427 - 36136526
Alignment:
Q  479 aatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcac 578  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  36136427 aattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcac 36136526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 46345601 - 46345449
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttct 169  Q
    ||||||||||| ||||||||||||||||||||||||  ||| |||        ||||||||||||||||||||| |||||| |||||| | |||||||||    
T  46345601 ctcctcaacctggactgattgtacaccggcaccttcggaccattcttttttttcggaaccatcacaaacaatttcgtgccatgtcataggcgatttttct 46345502  T
Q  170 ttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||||||||||||||| ||| || |||||||||||||| |||| ||||||||||    
T  46345501 ttgttcttctcatcaccctgaatgttaccctgattctgagacttatctacatt 46345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 489 - 618
Target Start/End: Complemental strand, 49217325 - 49217196
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||   | |||      
T  49217325 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaattgcaccttgaagatc 49217226  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  49217225 aaaaaacgtaacaatggagttttggaaact 49217196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 2267603 - 2267462
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||        |||||||||| |||| ||||   |||||||||||| | ||||||    
T  2267603 gctcctcctcaacctcgagtgattgtacaccgacaccttcgaacccttatttttttcggaaccatcgcaaataattccatgccacgtcataggcgatttt 2267504  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaa 208  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  2267503 tctttgttcttctcatcaccctgaacgttaccctgattctaa 2267462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 610
Target Start/End: Complemental strand, 34645805 - 34645674
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||  ||||||||    
T  34645805 caattcgaccacaaaacaacaataca-taggattcaaaaaacttacttgtttttgtgatcgaaattggcttggaatggcttgaaattgctccaaatcgca 34645707  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttt 610  Q
    |  |||||||  ||||| | ||||||| |||||    
T  34645706 cctaggagaaccaaaaacgtaacaatggagttt 34645674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 2645994 - 2645855
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| || ||||||||||| ||||||||| ||||||||       |||||||||| |||||||||   |||||||||||| ||||||||    
T  2645994 gctcctcctcaaccttgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccacgtcataggtgatttt 2645895  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||||| | || ||||||||||||||    
T  2645894 tcttttttcttctcatcatcgtgaatgttaccctgattct 2645855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 3494142 - 3494003
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||| |||||| | |||||||| |||||||||||| ||||||||       |||||||||| |||||||||   || ||||||||| ||||||||    
T  3494142 gctcctcctgaacctccagtgattgtaaaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgtcacgtcataggtgatttt 3494043  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  3494042 tcttttttcttctcatcatcctgaacgttaccctgattct 3494003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 3497836 - 3497697
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||| |||||| | |||||||| |||||||||||| ||||||||       |||||||||| |||||||||   || ||||||||| ||||||||    
T  3497836 gctcctcctgaacctccagtgattgtaaaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgtcacgtcataggtgatttt 3497737  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  3497736 tcttttttcttctcatcatcctgaacgttaccctgattct 3497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 34050828 - 34050967
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  34050828 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 34050927  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  34050928 tcttttttcgtctcatcatcgtgaacgttaccctgattct 34050967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 49139172 - 49139033
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  49139172 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 49139073  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  49139072 tcttttttcgtctcatcatcgtgaacgttaccctgattct 49139033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 54391543 - 54391682
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  54391543 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 54391642  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  54391643 tcttttttcgtctcatcatcgtgaacgttaccctgattct 54391682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 34692302 - 34692141
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnnc------ggaaccatcacaaacaattttgtgccacgtcatatgt 160  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| ||        |      ||||||||| |||||||||  |||||| |||||| |     
T  34692302 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccttttttttcttccttttcggaaccatcgcaaacaattccgtgccatgtcataggc 34692203  T
Q  161 gatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  34692202 gatttttctttgttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 34692141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 43478667 - 43478797
Alignment:
Q  489 caaaacaacaatacaataggattcaaaa-aacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaa 587  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||| |||| ||| ||||||||||   |||||     
T  43478667 caaaacaacaatgcaataggattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgcaccttggagat 43478766  T
Q  588 taaaaaatgcaacaatgaagttttggaaact 618  Q
     |||||| | ||||||| |||||||||||||    
T  43478767 caaaaaacgtaacaatggagttttggaaact 43478797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 46406106 - 46406245
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  46406106 gctcctcctcaacctcgagtgattgtacatcggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 46406205  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  46406206 tcttttttcgtctcatcatcgtgaacgttaccctgattct 46406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 49217747 - 49217608
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||||| |||||||| ||| ||||       |||||||||| |||||||||   ||||| |||||| | ||||||    
T  49217747 gctcctcctcaacctcgagtgattgtacacccgcaccttcgaactcttctttttttcggaaccatcgcaaacaattccatgccatgtcataggcgatttt 49217648  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    || ||||||||||||||| ||| |||||||||||||||||    
T  49217647 tcgttgttcttctcatcaccctgaacgttaccctgattct 49217608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 578
Target Start/End: Complemental strand, 3493927 - 3493730
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  3493927 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaaaaaaat 3493837  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
           |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||  || |||    
T  3493836 aacatataattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttctaatggcttcaaatgactcaaa 3493737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 578
Target Start/End: Complemental strand, 3497621 - 3497424
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  3497621 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaaaaaaat 3497531  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
           |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||  || |||    
T  3497530 aacatataattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttctaatggcttcaaatgactcaaa 3497431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 41579127 - 41579272
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn------cggaaccatcacaaacaattttgtgccacgtcatatgt 160  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||              || ||||||||||||||||| |||| || |||||| |     
T  41579127 gctcctcctcaacctggactgattgtacaccggcaccttcaaaccctttttttttcttttttcgaaaccatcacaaacaattatgtgtcatgtcataggc 41579226  T
Q  161 gatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  41579227 gatttttctttgttcttctcatcaccctgaacgttaccctgattct 41579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 578
Target Start/End: Complemental strand, 13894472 - 13894372
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    |||||| ||| |||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||| |||| ||| |||||||||    
T  13894472 caatttaaccgcaaaacaacaatgcaataggattaaaaaaacctacttgttttggtgattgaaattggcttggaatgacttgaaatagctcaaaatcgca 13894373  T
Q  578 c 578  Q
    |    
T  13894372 c 13894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 2429686 - 2429802
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||  |||||| |||||||| ||||||    
T  2429686 gctcctgctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttt-cggaaccatcgcaaacaattccgtgccatgtcatatgagatttt 2429784  T
Q  167 tctttgttcttctcatca 184  Q
    ||||||||||||||||||    
T  2429785 tctttgttcttctcatca 2429802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 553
Target Start/End: Original strand, 2430105 - 2430180
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaat 553  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  2430105 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattagcttggaat 2430180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 478 - 556
Target Start/End: Original strand, 7247698 - 7247776
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgac 556  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||    
T  7247698 caatttgaccacaaaacaacaatgcaataggattcaaaaaacttacttatttttttgattgaaattgacttggaatgac 7247776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 490 - 618
Target Start/End: Original strand, 16484294 - 16484423
Alignment:
Q  490 aaaacaacaatacaataggattcaaaaaactta-cttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||||   |||||      
T  16484294 aaaacaacaatgcaataggattaaaaaaacttaacttgtttttgttattgaaattggcttggaatgacttgaaatagctcaaaatcgcaccttggagatc 16484393  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||| ||||||    
T  16484394 aaaaaacgtaacaatggagtttttgaaact 16484423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 49611356 - 49611492
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||||||| |||||   ||||||        |||||||||| |||||||||  |||||||||||||   ||||||    
T  49611356 gctcctcctcaacctcgagtgattgtacaccggtacctt---acccttatttttttcggaaccatcgcaaacaattccgtgccacgtcatagacgatttt 49611452  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| | | |||||||||||||||||    
T  49611453 tctttgttcttctcatcaccttgaacgttaccctgattct 49611492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 24701337 - 24701255
Alignment:
Q  124 ggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||| ||| || ||||||||||||||    
T  24701337 ggaaccattgcaaacaattttgtgccacgtcataggcgatttttctttgttcttctcatcaccctgaatgttaccctgattct 24701255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 46406323 - 46406559
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  46406323 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 46406412  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  46406413 aacatacaattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 46406512  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   | | ||| ||||| ||||||||| |||||||||||||    
T  46406513 atcgcaccttgaaaaattaaaaacgcaacaatggagttttggaaact 46406559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 34051141 - 34051281
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||||||||    
T  34051141 caattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgca 34051240  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |     | ||| ||||| |||||||||||||||||||||||    
T  34051241 ccttcaaaaattaaaaacgcaacaatgaagttttggaaact 34051281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 504 - 618
Target Start/End: Complemental strand, 2950585 - 2950471
Alignment:
Q  504 ataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaat 603  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || ||||||||||   | | ||| ||||| ||||||||    
T  2950585 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaaaaattaaaaacgcaacaat 2950486  T
Q  604 gaagttttggaaact 618  Q
    | |||||||||||||    
T  2950485 ggagttttggaaact 2950471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 618
Target Start/End: Complemental strand, 20374445 - 20374327
Alignment:
Q  490 aaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaata 589  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||          ||| ||||||||||  | ||||||     
T  20374445 aaaacaacaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg----------gctgaaaatcgcacctaagagaatg 20374356  T
Q  590 aaaaatgcaacaatgaagttttggaaact 618  Q
    ||||| ||||||||| |||||||||||||    
T  20374355 aaaaacgcaacaatggagttttggaaact 20374327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 49138955 - 49138719
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  49138955 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 49138866  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  49138865 aacatacaattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 49138766  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  49138765 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 49138719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 49611680 - 49611736
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaa 428  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  49611680 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaa 49611736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 558
Target Start/End: Original strand, 51017020 - 51017091
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  51017020 cacaaaatatcaatgcaataggattcaaaaaacttacttgattttgtgctagaaattggtttggaatgactt 51017091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 7247603 - 7247673
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    ||||| |||| ||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||    
T  7247603 ctaaccattccaacctaaactatcctaacatatcataaaatcataaaattaataaaacctatataatcgaa 7247673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 43571357 - 43571405
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43571357 aattataacaattctacaacgattcatcaaaacctaaacctaacaattc 43571405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 372 - 424
Target Start/End: Complemental strand, 45099138 - 45099086
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaat 424  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  45099138 ctaacaattctaacctaaactatcctaacatatcatgaaatcataaaatcaat 45099086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 34470550 - 34470483
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  34470550 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 34470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 558
Target Start/End: Original strand, 44929199 - 44929270
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||    
T  44929199 cacaaaatagcaacacaataggattcaaaaaacttacttgattttgtgcttgaaattgacttggaatgactt 44929270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 557
Target Start/End: Complemental strand, 50457720 - 50457665
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgact 557  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  50457720 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgact 50457665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 34691970 - 34691917
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  34691970 ctaacaattctaacttaaactatcctaacatatcataaaatcataaaatcaata 34691917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 54391760 - 54391996
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||  ||||||         ||||||| ||| ||||||||| |||| |||||||          
T  54391760 ctaacaattctaacctaaactatcctaacatatcataaaatcaacaaatca---------atataattgaacctatataatcgaaatttaacaa-aaaat 54391849  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||| ||||||||| ||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  54391850 aacatacaattcgaccacaaagcaactattgcatagaattcaaaaagcttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 54391949  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  54391950 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 54391996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 7247533 - 7247581
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  7247533 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 7247581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 43478493 - 43478541
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  43478493 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 43478541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 45099199 - 45099151
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  45099199 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 45099151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 51694282 - 51694234
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  51694282 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 51694234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 618
Target Start/End: Original strand, 18441959 - 18442090
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggaga 586  Q
    |||||||||||||| ||||| ||||||||| ||||||||| || |||| ||  |||||| |||||||||||| |   || | ||||||||||  ||||      
T  18441959 cacaaaacaacaatgcaatatgattcaaaacacttacttgattatgtgcttagaattggcttggaatgactttagcctggtgaaaatcgcacctaggaat 18442058  T
Q  587 ataaaaaatgcaacaatgaagttttggaaact 618  Q
    || ||||| ||||||||| |||||| ||||||    
T  18442059 atcaaaaacgcaacaatgcagttttagaaact 18442090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 618
Target Start/End: Original strand, 19487033 - 19487164
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggaga 586  Q
    |||||||||||||| ||||| ||||||||| ||||||||| || |||| ||  |||||| |||||||||||| |   || | ||||||||||  ||||      
T  19487033 cacaaaacaacaatgcaatatgattcaaaacacttacttgattatgtgcttagaattggcttggaatgactttagcctggtgaaaatcgcacctaggaat 19487132  T
Q  587 ataaaaaatgcaacaatgaagttttggaaact 618  Q
    || ||||| ||||||||| |||||| ||||||    
T  19487133 atcaaaaacgcaacaatgcagttttagaaact 19487164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 44223410 - 44223371
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44223410 aattctacaacgattcatcaaaacctaaacctaacaattc 44223371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 46345328 - 46345289
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46345328 aattctacaacgattcatcaaaacctaaacctaacaattc 46345289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 52568167 - 52568128
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  52568167 aattctacaacgattcatcaaaacctaaacctaacaattc 52568128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 20374705 - 20374657
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  20374705 aattctaacaattctacaaccattcatcaaaacctaaacctaacaattc 20374657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 49217483 - 49217435
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  49217483 aattctaacaattctgcaacgattcatcaaaacctaaacctaacaattc 49217435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 49611619 - 49611667
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||||||    
T  49611619 aattctaacaattctacaaggattcatcaaaacctaaacctaacaattc 49611667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 13894634 - 13894595
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  13894634 aattctacaacgattcatcaaaacctaaatctaacaattc 13894595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 618
Target Start/End: Complemental strand, 27096224 - 27096093
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggaga 586  Q
    ||||| ||| |||| ||||||||||||||| ||||||||| |||| |  ||  |||||| |||||||| ||| |  ||| | ||||||||||  ||||      
T  27096224 cacaacacagcaatgcaataggattcaaaacacttacttgattttttccttagaattggcttggaatggcttaagcttggtgaaaatcgcacctaggaat 27096125  T
Q  587 ataaaaaatgcaacaatgaagttttggaaact 618  Q
    || ||||| ||||||||| |||||||||||||    
T  27096124 atcaaaaacgcaacaatggagttttggaaact 27096093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 34645969 - 34645930
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34645969 aattctacaacgaatcatcaaaacctaaacctaacaattc 34645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 42321964 - 42321897
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||| || || ||||||| ||| ||||    
T  42321964 cacaaaataacaatgcaataggattcaaaaaacttacttgattttttgctttaaattggcttgaaatg 42321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 2645783 - 2645730
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  2645783 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 2645730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 558
Target Start/End: Original strand, 49275133 - 49275194
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    |||| |||||||||| |||||||||||||  ||||||| |||||||||| ||| ||||||||    
T  49275133 caatgcaataggattaaaaaaacttacttaattttgtgcttgaaattggcttgaaatgactt 49275194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 52568106 - 52568053
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  52568106 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 52568053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 20374977 - 20374929
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    ||||||||||||| | || |||||||||||||||||||||||| |||||    
T  20374977 gctcctcctcaacttggaatgattgtacaccggcaccttcaaatccttc 20374929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 27096294 - 27096254
Alignment:
Q  402 tatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  27096294 tatcataaaatcataaaatcaataaaacatctataatcgaa 27096254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 34692031 - 34691983
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||| ||| |||||||||||||||||||||||||||||    
T  34692031 aattctaacaattctgcaatgattcatcaaaacctaaacctaacaattc 34691983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 552
Target Start/End: Complemental strand, 8397791 - 8397736
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaa 552  Q
    |||| ||||||||||||||| ||||||||| ||||||| ||| |||||| ||||||    
T  8397791 caatgcaataggattcaaaacacttacttgattttgtgcttgtaattggcttggaa 8397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 27096690 - 27096574
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| || |||||||||||||| |||||| || |||||        ||||||||||||  | |||| ||| || |||| ||||||||||    
T  27096690 gctcctcctcaacctagaatgattgtacaccggtaccttcgaatccttcatttttatggaaccatcacattcgatttcgtgtcatgtcacatgtgatttt 27096591  T
Q  167 tctttgttcttctcatc 183  Q
     |||| ||||| |||||    
T  27096590 gctttcttcttgtcatc 27096574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 463
Target Start/End: Original strand, 43478554 - 43478638
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa-tctatataattgaaagttaac 463  Q
    |||||||||||||||||||||||||| ||||        ||||||||||||||||||  ||||||||||||  ||||||||| |||| |||||    
T  43478554 ctaacaattctaacctaaactatcctaacat--------atcataaaatcaataaaatctatataatcgaaccctatataatcgaaatttaac 43478638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 407
Target Start/End: Complemental strand, 44490668 - 44490633
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcat 407  Q
    |||||||||||||||||||||||||| |||||||||    
T  44490668 ctaacaattctaacctaaactatcctaacatatcat 44490633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 97
Target Start/End: Original strand, 27188290 - 27188320
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacacc 97  Q
    |||||||||||||||||||||||||||||||    
T  27188290 gctcctcctcaacctcgactgattgtacacc 27188320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 34051045 - 34051087
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  34051045 ctaaccattctaacctaaactatcctaacatatcataaaatca 34051087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 44223349 - 44223307
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  44223349 ctaaccattctaacctaaactatcctaacatatcataaaatca 44223307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 2267387 - 2267334
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||  |||||||||    
T  2267387 ctaaccattctaacctaaactatactaacatatcataaaatcaacaaatcaata 2267334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 10052357 - 10052247
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||       |||| ||||||||    ||| ||||||| |||||  ||||||||    
T  10052357 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtgattctgtgccatgtcatcagtgatttt 10052258  T
Q  167 tctttgttctt 177  Q
    ||||| |||||    
T  10052257 tctttcttctt 10052247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 369
Target Start/End: Original strand, 2429946 - 2429982
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaa 369  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  2429946 aattctaacaattctacaacgattcatcaaaacctaa 2429982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 465
Target Start/End: Original strand, 2430010 - 2430094
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaa 465  Q
    ||||| |||||||||||||||||||| ||||        ||||| ||||||||||||| ||||| |||||| ||||||||| |||| |||||||    
T  2430010 ctaaccattctaacctaaactatcctaacat--------atcatgaaatcaataaaacctatat-atcgaacctatataatcgaaatttaacaa 2430094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 11377981 - 11377933
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  11377981 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 11377933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 14632684 - 14632732
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  14632684 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 14632732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 24701123 - 24701075
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||| |||||||||| ||||||| ||||||||||||||||    
T  24701123 aattctaacaattatacaacgattaatcaaaatctaaacctaacaattc 24701075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 34471061 - 34471013
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  34471061 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 34471013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 36136336 - 36136372
Alignment:
Q  378 attctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  36136336 attctaacctaaactatcctaacatatcataaaatca 36136372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 42322408 - 42322360
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  42322408 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 42322360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Original strand, 44929075 - 44929103
Alignment:
Q  363 aacctaaacctaacaattctaacctaaac 391  Q
    |||||||||||||||||||||||||||||    
T  44929075 aacctaaacctaacaattctaacctaaac 44929103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 49274636 - 49274684
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  49274636 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 49274684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 2e-84; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 333 - 618
Target Start/End: Complemental strand, 6281260 - 6280963
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattctaacc---------taaactatcctcacatatcattaaatcataaaatcaa 423  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||         ||||||||||| |||||||||||||||||||||||||    
T  6281260 aattctaagaattctacaacgatttatcaaaatctaaacctaacaattctaaccattctaacctaaactatcctaacatatcattaaatcataaaatcaa 6281161  T
Q  424 taaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnnnnnn---caatttgaccacaaaacaacaatacaataggattcaaaaaact 520  Q
    ||||||||||||||||||| |||||||||||||  |||||||               ||||||||||||||||||||||| ||||| |||| ||||||||    
T  6281160 taaaacatatataatcgaacctatataattgaattttaacaaaaaaaaaaaaaaaaacaatttgaccacaaaacaacaatgcaatatgattaaaaaaact 6281061  T
Q  521 tacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  6281060 tacttgtttttgtgattgaaattggtttggaatgacttcaaattgtttaaaatcgcaccaaggagaataaaaaacgtaacaatgaagttttggaaact 6280963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 65 - 222
Target Start/End: Complemental strand, 6281525 - 6281366
Alignment:
Q  65 ctgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtga 162  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||          ||||||||||||||||||||||||| ||||||||| ||||    
T  6281525 ctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttttttttttttcggaaccatcacaaacaattttgtgtcacgtcataggtga 6281426  T
Q  163 tttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  6281425 tttttctttgttcttctcatcaccctgaacgttaccctgattctaagacatatctacatt 6281366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 39590300 - 39590535
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||||||||         |||||||| ||||||||| |||| |||||||          
T  39590300 ctaacaattctaacctatactatcctaacatatcataaaatcataaaatcaata---------taatcgaacctatataatcgaaatttaacaa--aaaa 39590388  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||  |||||||| |||||||||||| |||    
T  39590389 aacaaacaattcgaccacaaaacaacaatgcaatagggttcagaaaacttacttgtttttgtgattgaaattgacttggaatggcttcaaattgctcaaa 39590488  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||  ||||||||||||||| ||||||||  |||||||||||||    
T  39590489 atcgcagcaaggagaataaaaaacgcaacaattgagttttggaaact 39590535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 51426784 - 51426642
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  51426784 caattcgaccacaaaacagcaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgca 51426685  T
Q  578 cgaaggagaat--aaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||| |||  |||||| | ||||||| |||||||||||||    
T  51426684 cctaggaaaataaaaaaaacgtaacaatggagttttggaaact 51426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 28083818 - 28083958
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  || |||||||||    
T  28083818 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgaattcaaatgactcaaaatcgca 28083917  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||||||||| ||||||||| |||||||||||||    
T  28083918 ccttggataataaaaaacgcaacaatggagttttggaaact 28083958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 33384050 - 33383910
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  33384050 caattcgaccacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgca 33383951  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  ||||||  ||||||   ||||||| |||||||||||||    
T  33383950 cctaggagatcaaaaaacataacaatggagttttggaaact 33383910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 34528410 - 34528270
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  34528410 caattcgaccacaaaacaacaatgcaataggattcagaaaacttatttgtttttgtgattgaaattggcttggaatggcttcaaattgctcaaaatcgca 34528311  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
      ||||| ||| |||||  |||||||| |||||||||||||    
T  34528310 gcaaggataatcaaaaacacaacaatggagttttggaaact 34528270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 34528818 - 34528681
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||| ||||||||||||| | ||||||    
T  34528818 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttt 34528719  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  34528718 tctttgttcttctcatcaccctgaacgttaccctgatt 34528681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 44558894 - 44558754
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||    
T  44558894 caattcgaccacaaaataacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcgaattgctaaaaattgca 44558795  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||||||| ||||| | || |||| |||||||||||||    
T  44558794 cctaggagaatcaaaaacgtaataatggagttttggaaact 44558754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 481 - 604
Target Start/End: Complemental strand, 49422332 - 49422209
Alignment:
Q  481 tttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacga 580  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||      
T  49422332 tttgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaattgctgaaaatcgcacct 49422233  T
Q  581 aggagaataaaaaatgcaacaatg 604  Q
    ||||||  |||||| |||||||||    
T  49422232 aggagatcaaaaaacgcaacaatg 49422209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 1043932 - 1044062
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| ||||||||| |||||||||||||||| ||||||    
T  1043932 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattatgtgccacgtcatatgcgatttt 1044031  T
Q  167 tctttgttcttctcatcatcctaaacgttac 197  Q
    |||||||||||||||||| ||| ||||||||    
T  1044032 tctttgttcttctcatcaccctgaacgttac 1044062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 34151860 - 34151719
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaa-cttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgc 576  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  34151860 caattcgaccacaaaacaacaatgcaataggattcaaaaaaacttacttggttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgc 34151761  T
Q  577 acgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||||||||||||||   ||||||| |||||| ||||||    
T  34151760 atctaggagaataaaaaacataacaatggagttttagaaact 34151719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 554
Target Start/End: Original strand, 37959454 - 37959634
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||  ||||||||| |||| |||||||          
T  37959454 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaacctatat-atcgagcctatataatcgaaatttaacaa-aaaaa 37959551  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
          ||||| ||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37959552 aacaaacaattcgacaacaatacaacaatgcaacaggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 37959634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 956036 - 955896
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  956036 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttatttttgtgattgaaattggcttggaatggcttgaaattgctcaaaatcgca 955937  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  ||||||  |||||| | ||||||||| |||| ||||||    
T  955936 cctaggagatcaaaaaacgtaacaatgaatttttagaaact 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 21015984 - 21015844
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  || |||||||||    
T  21015984 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaatgactcaaaatcgca 21015885  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  21015884 ccttggataatcaaaaacgcaacaatggagttttggaaact 21015844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 1044265 - 1044512
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaac---aagnn 468  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||  ||| |||||   ||       
T  1044265 ctaacaattctaacctaaactatcttaacatatcataaaatcataaaatcaataaaatatatataatcgaacctatataatcaaaatttaacaaaaaaaa 1044364  T
Q  469 nnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctt 568  Q
             |||||  ||| |||||||||||| |||||  ||| |||||||||| |||||||||||||||||||||| ||| |||||||| |||| |||     
T  1044365 aaaaacaaacaattcaaccgcaaaacaacaatgcaata--attaaaaaaacttatttgtttttgtgattgaaattggcttgaaatgacttgaaatagctc 1044462  T
Q  569 aaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||   |||||  |||||| | ||||||| |||||||||||||    
T  1044463 aaaatcgcaccttggagatcaaaaaacgtaacaatggagttttggaaact 1044512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 49572309 - 49572450
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||||       |||||||||||||||||||| ||||| | |||||| | ||||||    
T  49572309 gctcctcctcaacctggactgattgtacaccggcaccctcgaacccttctttttttcggaaccatcacaaacaattatgtgctatgtcataggcgatttt 49572408  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaa 208  Q
    |||||||||||||||||| ||| || ||||||||||||||||    
T  49572409 tctttgttcttctcatcaccctgaatgttaccctgattctaa 49572450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 49422755 - 49422620
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||| |||| || |||||| |||||||||    
T  49422755 ctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgtcatgtcataggtgattttt 49422656  T
Q  168 ctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||| |||||||||| ||| ||| |||||||||||    
T  49422655 ctttgtccttctcatcaccctgaac-ttaccctgatt 49422620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 37867659 - 37867798
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||        ||||||||||||||||||||||||||||| ||||| | ||||||    
T  37867659 gctcctcctcaacctcgagtgattatacaccggcaccttcgaacccttatttttttcggaaccatcacaaacaattttgtgccacatcataggcgatttt 37867758  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||| |||| |||| ||| |||||||||||||||||    
T  37867759 tctttgttattcttatcaccctgaacgttaccctgattct 37867798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 34152284 - 34152146
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||| ||| || |||||| |  |||||    
T  34152284 gctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttctttttt-cggaaccatcacaaacaatttcgtgtcatgtcataggcaatttt 34152186  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| ||||||||| |||||||    
T  34152185 tctttgttcttctcatcaccctgaacgttaccttgattct 34152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 44559325 - 44559187
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||  || || |||||| | ||||||    
T  44559325 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc-ttttttcagaaccatcacaaacaatttcatgtcatgtcataggcgatttt 44559227  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||| |||| ||| |||||||||||||||||    
T  44559226 tctttgttcttcttatcaccctgaacgttaccctgattct 44559187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 478 - 616
Target Start/End: Original strand, 49572729 - 49572866
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| |||    
T  49572729 caattcgaccacaaaataacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgactt-aaattgctcaaaattgca 49572827  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaa 616  Q
    |  | ||||  |||||| | ||||||| |||||||||||    
T  49572828 cctaagagatcaaaaaacgtaacaatggagttttggaaa 49572866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 37868107 - 37868236
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| ||| |||||||| |||| ||| ||||||||||   |||||      
T  37868107 caaaacaacaatgcaataggattacaaaaacttacttgtttttgtgattgaaattggcttgaaatgacttgaaatagctcaaaatcgcaccttggagata 37868206  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||| ||||||| |||||||||||||    
T  37868207 aaaaaatgtaacaatggagttttggaaact 37868236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 39589968 - 39590129
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||||       |||||||||| |||||||||  ||| ||||||||| |  |||||    
T  39589968 gctcctcctcaacctcaagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattacgtgacacgtcataggcaatttt 39590067  T
Q  167 tctttgttcttctcatcatcctaaacgttaccc------tgattctaagacatatctacatt 222  Q
    |||||||||||||||||| ||||||||||||||      ||||||| |||||||||||||||    
T  39590068 tctttgttcttctcatcaccctaaacgttaccctaattttgattctgagacatatctacatt 39590129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 40352896 - 40352755
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||         |||||||||| |||||||||   |||||||||||| ||||||    
T  40352896 gctcctcctcaacctcgactgattgtacactggcaccttcgaacccttctttttttttcggaaccatcgcaaacaattccatgccacgtcataggtgatt 40352797  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||| |||||||||||| ||| |||||||||||||||||    
T  40352796 tttcttttttcttctcatcaccctgaacgttaccctgattct 40352755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 6176435 - 6176296
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  6176435 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 6176336  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  6176335 tcttttttcgtctcatcatcgtgaacgttaccctgattct 6176296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 21016297 - 21016158
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  21016297 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 21016198  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  21016197 tcttttttcgtctcatcatcgtgaacgttaccctgattct 21016158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 9491123 - 9491252
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    ||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||| |||| ||||||||||||||   |||||      
T  9491123 caaaataacaatgcaataggattaaaaaaacttacttatttttgtgattgaaattgacttggaatgacttgaaatagcttaaaatcgcaccttggagatc 9491222  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  9491223 aaaaaacgtaacaatggagttttggaaact 9491252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 41793705 - 41793469
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  41793705 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 41793616  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  41793615 aacatacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 41793516  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   | | ||| ||||| ||||||||| |||||||||||||    
T  41793515 atcgcaccttgaaaaattaaaaacgcaacaatggagttttggaaact 41793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 56140529 - 56140658
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||||  || ||||||||||   |||||      
T  56140529 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaataactcaaaatcgcaccttggagatc 56140628  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  56140629 aaaaaacgtaacaatggagttttggaaact 56140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 40352581 - 40352441
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    
T  40352581 caattcgaccacaaagcaataatgcaatagaattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgca 40352482  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| |||  |||| ||||||||| |||||||||||||    
T  40352481 ccttggataattcaaaacgcaacaatggagttttggaaact 40352441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 41793922 - 41793785
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  41793922 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 41793823  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    ||||| ||| |||||||||| | |||||||||||||||    
T  41793822 tcttttttcgtctcatcatcgtgaacgttaccctgatt 41793785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 956452 - 956312
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||        ||||||||||||||| |||| | || || |||||| | |||||    
T  956452 gctcctcctcaacctggactgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcacaaataattatatgtcatgtcataggcgattt 956353  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| |||||||| ||||||||    
T  956352 ttctttgttcttctcatcaccctgaacgttactctgattct 956312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 51427199 - 51427061
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    |||||||||||||||||||| ||||||||| ||||||||| || |||||        |||||||||||||||||||| |||  || |||||| | |||||    
T  51427199 gctcctcctcaacctcgactaattgtacactggcaccttcgaatccttcttttttttcggaaccatcacaaacaattgtgt--catgtcatacgcgattt 51427102  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  51427101 ttctttgttcttctcatcaccctgaacgttaccctgattct 51427061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 55799357 - 55799497
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||||||||    
T  55799357 caattcgaccacaaagcaacaaagcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgca 55799456  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   | | ||| ||||| ||||||||| |||||||||||||    
T  55799457 ccttgaaaaattaaaaacgcaacaatggagttttggaaact 55799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 49095832 - 49095972
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc-nnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||        |||||||||| |||||||||   ||||| |||||| |||| ||    
T  49095832 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcgcaaacaattccatgccatgtcataggtgactt 49095931  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||| ||| |||||||||| | |||||||||||||||||    
T  49095932 ttcttttttcgtctcatcatcgtgaacgttaccctgattct 49095972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 49572632 - 49572702
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  49572632 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaacctatataatcgaa 49572702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 9490674 - 9490815
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||||||||||||||| ||||||||||||| ||| ||| |||| ||          |||||||||  |||||||||| ||||||||||||| ||||||    
T  9490674 gctcctcctcaacctcgagtgattgtacaccgacacattcgaacctttttttttttttcggaaccattgcaaacaatttcgtgccacgtcataggtgatt 9490773  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||| ||| ||||||| |||||||||    
T  9490774 tttctttgttcttctcatcaccctgaacgttatcctgattct 9490815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 481 - 618
Target Start/End: Complemental strand, 4783885 - 4783751
Alignment:
Q  481 tttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacga 580  Q
    |||||||||||||||||||| ||||| |||||||||||   |||||||||||||||||||||| | |||||||| ||| |||||||| ||||||| ||      
T  4783885 tttgaccacaaaacaacaatgcaataagattcaaaaaa---acttgtttttgtgattgaaattagcttggaatggcttgaaattgctcaaaatcgtactt 4783789  T
Q  581 aggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||| ||  |||||   ||||||| |||||||||||||    
T  4783788 aggacaaccaaaaacctaacaatggagttttggaaact 4783751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 49422433 - 49422366
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatc 439  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  49422433 ctaacaattctaacctaaactatcctaacatatcatgaaatcataaaatcaataaaacctatataatc 49422366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 56140424 - 56140494
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||    
T  56140424 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatctatataatcgaa 56140494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 56140102 - 56140220
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||        | |||||||| |||||||||  ||||||||||||| | |||||    
T  56140102 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttcttttttttcagaaccatcgcaaacaattccgtgccacgtcataggcgattt 56140201  T
Q  166 ttctttgttcttctcatca 184  Q
    |||||||||||||||||||    
T  56140202 ttctttgttcttctcatca 56140220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 6176218 - 6175982
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  6176218 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 6176129  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  6176128 aacatacaattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 6176029  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  6176028 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 6175982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 49096050 - 49096286
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  49096050 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 49096139  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  49096140 aacatacaattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 49096239  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  49096240 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 49096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 4784278 - 4784195
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||  ||||||  |||||  |||||||||||||||||||||||||  || |||||||||||||||||    
T  4784278 cggaaccatcacaaacaattccgtgccatttcatagatgatttttctttgttcttctcatcacactgaacgttaccctgattct 4784195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 51026290 - 51026220
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgact 557  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  51026290 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgact 51026220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 37959182 - 37959263
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||||| |||| || |||||| | |||||||||||||||||||||||| | | || ||||||||||||    
T  37959182 cggaaccatcacaaacaattatgtgtcatgtcataggcgatttttctttgttcttctcatcaccttgaatgttaccctgatt 37959263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 1044204 - 1044252
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  1044204 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 1044252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 9490948 - 9490996
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  9490948 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 9490996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 34152012 - 34151964
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  34152012 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 34151964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 37867930 - 37867978
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  37867930 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 37867978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 44559053 - 44559005
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  44559053 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 44559005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 51426927 - 51426879
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  51426927 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 51426879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 56140363 - 56140411
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  56140363 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 56140411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 956180 - 956141
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  956180 aattctacaacgattcatcaaaacctaaacctaacaattc 956141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 558
Target Start/End: Original strand, 9718977 - 9719048
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||| || |||||||||| ||| ||||||||    
T  9718977 cacaaaacaacaatgaaataagattcaaaaaacttacttgattttatgcttgaaattggcttgaaatgactt 9719048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 37959402 - 37959441
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37959402 aattctacaacgattcatcaaaacctaaacctaacaattc 37959441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 558
Target Start/End: Complemental strand, 43887714 - 43887664
Alignment:
Q  508 gattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  43887714 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgactt 43887664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 4784061 - 4784013
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  4784061 aattctaacaattctacaacaattcatcaaaacctaaacctaacaattc 4784013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 21410973 - 21410929
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  21410973 ctcctcaaccttgactgattgtacaccggcaccttcaaatccttc 21410929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 21412473 - 21412517
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  21412473 ctcctcaaccttgactgattgtacaccggcaccttcaaatccttc 21412517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 33384194 - 33384146
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  33384194 aattctaacaattctacaacaattcatcaaaacctaaacctaacaattc 33384146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 55797830 - 55797878
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  55797830 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 55797878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 9718737 - 9718776
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  9718737 aattctacaacaattcatcaaaacctaaacctaacaattc 9718776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 501 - 544
Target Start/End: Original strand, 22438370 - 22438413
Alignment:
Q  501 acaataggattcaaaaaacttacttgtttttgtgattgaaattg 544  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  22438370 acaataggattcaaaaaacttacttgattttgtgcttgaaattg 22438413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 34528552 - 34528513
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  34528552 aattctacaacgattcatcaaaatctaaacctaacaattc 34528513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 36774946 - 36774879
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| |||||| |||||||||||||||||| ||||||| |||||||| | ||||||||    
T  36774946 cacaaaatagcaatgcaatagaattcaaaaaacttacttgattttgtgcttgaaattcgcttggaatg 36774879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 42887488 - 42887527
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttc 106  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  42887488 gctcctcctcaacctcgactgattgtacaccagcaccttc 42887527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 49422485 - 49422446
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  49422485 aattctgcaacgattcatcaaaacctaaacctaacaattc 49422446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 33384133 - 33384091
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  33384133 ctaacaattctaacctaaactatcctaacatatcataaaatca 33384091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 34528500 - 34528458
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  34528500 ctaacaattctaacctaaactatcctaacatatcataaaatca 34528458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 2774751 - 2774804
Alignment:
Q  502 caataggattcaaaa-aacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||    
T  2774751 caataggattcaaaaaaacttacttgattttgtgcttgaaattggcttggaatg 2774804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 21016080 - 21016027
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  21016080 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 21016027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 8866970 - 8866918
Alignment:
Q  506 aggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||  ||||||||| ||||||| ||| |||||||||||||||||||    
T  8866970 aggattcaaagcacttacttgattttgtgtttgtaattggtttggaatgactt 8866918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 465
Target Start/End: Original strand, 9491009 - 9491094
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaa 465  Q
    ||||||||||||||||||| |||||| ||||        ||||||||||||||||||  ||||||||||||  |||||||| |||| |||||||    
T  9491009 ctaacaattctaacctaaaatatcctaacat--------atcataaaatcaataaaatctatataatcgaacatatataatcgaaatttaacaa 9491094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 4784341 - 4784302
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttc 106  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  4784341 gctcctcctcaacctcgaatgattgtacaccggcaacttc 4784302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 558
Target Start/End: Complemental strand, 4910058 - 4909987
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    |||||||||||||| ||||| |||   || |||||||||| ||||||| |||||||| | ||||||||||||    
T  4910058 cacaaaacaacaatgcaataagatgataacaacttacttgattttgtgcttgaaattagcttggaatgactt 4909987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 42887550 - 42887609
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcat 182  Q
    ||||||||||||||||||||  ||| || ||||||   ||||||||||||||||||||||    
T  42887550 cggaaccatcacaaacaattccgtgtcatgtcatagacgatttttctttgttcttctcat 42887609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 956119 - 956077
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  956119 ctaaccattctaacctaaactatcctaacatatcataaaatca 956077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 44558983 - 44558941
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  44558983 ctaaccattctaacctaaactatcctaacatatcataaaatca 44558941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 554
Target Start/End: Original strand, 24076708 - 24076765
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||| ||||||||||||||  ||||||||| ||||||| ||| |||||| ||||||||    
T  24076708 caatgcaataggattcaaagcacttacttggttttgtgtttgtaattggcttggaatg 24076765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 40352677 - 40352624
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| | ||||||| ||||||  |||||||||    
T  40352677 ctaaccattctaacctaaactatcctaagatatcataaaatcaacaaatcaata 40352624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 4910634 - 4910517
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||| |||||| ||| || ||||| |||| || |||||||||| |||||       |||||||||||||  | ||||||||||| |||||| | ||||||    
T  4910634 gctcttcctcagcctagaatgattatacatcgacaccttcaaatccttcctttttacggaaccatcacattcgattttgtgccatgtcataggcgatttt 4910535  T
Q  167 tctttgttcttctcatca 184  Q
     |||| ||||| ||||||    
T  4910534 gctttcttcttgtcatca 4910517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 21170688 - 21170736
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  21170688 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 21170736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 1e-76; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 346 - 618
Target Start/End: Complemental strand, 49925241 - 49924962
Alignment:
Q  346 ctacaacgattcatcaaaacctaaacctaacaattctaacct---------aaactatcctcacatatcattaaatcataaaatcaataaaacatatata 436  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||| |  |||||||||||||||||||||||||||| |||||     
T  49925241 ctacaacgattcatcaaaacctaaacctaacaattctaacctttataacctaaactatcctaa--tatcattaaatcataaaatcaataaaacctatatt 49925144  T
Q  437 atcgaatctatataattgaaagttaacaagnnnnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgat 536  Q
    |||||| |||| ||||||||| |||||||             |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  49925143 atcgaacctatgtaattgaaatttaacaaaaaaaaaaaaaataatttgaccacaaaacaacaatgcaataggattcaaaaatcttacttgtttttgtgat 49925044  T
Q  537 tgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  49925043 tgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttggaaact 49924962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 49398191 - 49398437
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| |||||| || ||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||          
T  49398191 ctaaccattctaacctaaactatcctaacatattataaaatcataaaatcaataaaacctatacaatcgaacctatataattgaaatttaacaacaaaaa 49398290  T
Q  472 nnnnnn-caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaa 570  Q
           ||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49398291 aaacaaacaattcgatcacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctcaa 49398390  T
Q  571 aatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||| ||||  |||||||||||||| | ||||||| |||||||||||||    
T  49398391 aatagcacctaggagaataaaaaacgtaacaatg-agttttggaaact 49398437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 378 - 618
Target Start/End: Original strand, 49428890 - 49429129
Alignment:
Q  378 attctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnnnnnn 477  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||| ||||||||| |||| |||||||                
T  49428890 attctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatctatataatcgaacctatataatcgaaatttaacaa-aaaataacaaa 49428988  T
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| ||| || | ||||||||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||||||    
T  49428989 caattcgaccacaaagcaacaatgcaaaagtaatcaaaaaacttacttgtttttgtgattgaaattggcttagaatgacttcaaatgacttaaaatcgca 49429088  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||||||||| ||||||||| |||||||||||||    
T  49429089 ccttggataataaaaaacgcaacaatggagttttggaaact 49429129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 484 - 618
Target Start/End: Original strand, 51271424 - 51271558
Alignment:
Q  484 gaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaagg 583  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||  ||||    
T  51271424 gaccacaaaacaacaatgcaataggattcataaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcagcaagg 51271523  T
Q  584 agaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||| |||||||||||||||||||||||    
T  51271524 agaataaaaaacgcaacaatgaagttttggaaact 51271558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 36911415 - 36911664
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| |||| |||||||          
T  36911415 ctaacaattctaacctaaattatcctaacatatcatgaaatcataaaatcaataaaacttatataatcgaacctatataatcgaaatttaacaaaaaaaa 36911514  T
Q  472 nnnnnn--caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctta 569  Q
            ||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |||||||| |    
T  36911515 aaaaaaaacaattcgaccacaaaacaacaatgcaataagattcaaaaaacttacctgtttttgtgattgaaattggcttgaaatggcttgaaattgctga 36911614  T
Q  570 aaatcgcacgaaggaga-ataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||  ||||||   |||||||| ||||||| |||||||||||||    
T  36911615 aaatcgcacctaggagatcaaaaaaatgtaacaatggagttttggaaact 36911664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 49925446 - 49925291
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||| |||||||||| ||||||||||||||||| ||| |||| |||       ||||||||||||||||||||||||||||||||||| ||||||||    
T  49925446 gctcctcgtcaacctcgagtgattgtacaccggcacattcgaacctttctttttttcggaaccatcacaaacaattttgtgccacgtcataggtgatttt 49925347  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  49925346 tctttgttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 49925291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 41803861 - 41804000
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| |||    
T  41803861 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttatttttgtgattgaaattggcttggaatgacttcaaattgctcaaaattgca 41803960  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaac 617  Q
    |  |||||||||||||||| ||||||| ||||||| ||||    
T  41803961 cctaggagaataaaaaatgtaacaatggagttttgaaaac 41804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 29760857 - 29760609
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaac--aagnnn 469  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||| ||||||||| |||| |||||  ||        
T  29760857 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatctatataatcgaacctatataatcgaaatttaacaaaaaaaa 29760758  T
Q  470 nnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctta 569  Q
            |||||  ||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| || ||||||||| ||||  || |    
T  29760757 caaacaaacaattcaaccgcaaaacaacaatgcaataggattaaaaaaacttacttctttttgtgattgaaattggcttagaatgacttgaaataactca 29760658  T
Q  570 aaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||   |||||  |||||| | ||||||| ||||||| |||||    
T  29760657 aaatcgcaccttggagataaaaaaacgtaacaatggagttttgaaaact 29760609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 42570368 - 42570228
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||    
T  42570368 caattcgaccacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattgactttgaatgacttcaaattgctcaaaatcgca 42570269  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  ||||||||||||||   ||||||| |||||||||||||    
T  42570268 cctaggagaataaaaaacataacaatggagttttggaaact 42570228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 49428548 - 49428687
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||| ||||||||||||| | ||||||    
T  49428548 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttt 49428647  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  49428648 tctttgttcttctcatcaccctgaacgttaccctgattct 49428687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 36911089 - 36911230
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||| |||||| |||||||||||||    
T  36911089 gctccttctcaacctcgactgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaatttcgtgccatgtcatatgtgatt 36911188  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  36911189 tttctttgttcttctcatcaccctgaacgttaccctgattct 36911230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 19162234 - 19161997
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| ||||||           
T  19162234 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacacaaaaat 19162144  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||   | |||    
T  19162143 aacatacaattcgaccacaaagcaaaaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaatgattcaaa 19162044  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||||||||||||||||||| |||||||||||||    
T  19162043 atcgcaccttggataataaaaaatgcaacaatggagttttggaaact 19161997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 26633773 - 26633632
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  26633773 caattcgaccacaaaacaacaatgcaataggattaaaaaaacttagttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgca 26633674  T
Q  578 cgaaggagaataa-aaaatgcaacaatgaagttttggaaact 618  Q
       |||||||||| |||| | |||| || |||||||||||||    
T  26633673 tctaggagaataaaaaaacgtaacattggagttttggaaact 26633632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 521 - 618
Target Start/End: Original strand, 29437890 - 29437987
Alignment:
Q  521 tacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  29437890 tacttgtttttgtgattgaaattggtttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttggaaact 29437987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 14172333 - 14172193
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||  || |||||||| |||||||||    
T  14172333 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacctgtttttgtgattgaaattggcttggaatggtttgaaattgctgaaaatcgca 14172234  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  ||||||  |||||| | |||||| ||||||||||||||    
T  14172233 cctaggagatcaaaaaacgtaacaataaagttttggaaact 14172193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 14172757 - 14172599
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnnc---ggaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||           ||||| ||||||||||||| ||||||| |||||| |||||    
T  14172757 gctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttcttgttttttttggaactatcacaaacaattatgtgccatgtcataggtgat 14172658  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||| ||||||| |||||||| ||| ||| ||||||||||||| |||||||||||||||    
T  14172657 ttttttttgttcctctcatcaccctgaacattaccctgattctgagacatatctacatt 14172599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 26634205 - 26634043
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-------cggaaccatcacaaacaattttgtgccacgtcatatg 159  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||              | |||||||||| ||||||| ||||||| |||||| |    
T  26634205 gctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttcatttttttctttttcagaaccatcactaacaattatgtgccatgtcatagg 26634106  T
Q  160 tgatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
     |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  26634105 cgatttttctttgttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 26634043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 6437261 - 6437507
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||| ||||| |||||||||  ||| |||||||          
T  6437261 ctaaccattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatctatata-tcgaacctatataatcaaaatttaacaaaaaaca 6437359  T
Q  472 nnnnnn-caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaa 570  Q
           ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  ||| |||| |||  |||  |  ||    
T  6437360 aaaaaaacaattcgaccacaaaacaacaatgcaataggattcaaaaaatttacttgtttttgtgattgaaattgacttgtaatggcttggaatgacagaa 6437459  T
Q  571 aatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||  | |||||| ||||  ||||||||| |||||| ||||||    
T  6437460 aatcgcacctaagagaatgaaaaccgcaacaatggagttttagaaact 6437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 48227720 - 48227859
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||||||       |||||||||| ||||||||| ||||||||||||||   ||||||    
T  48227720 gctcctcctcaacctcgagcgattgtacatcggcaccttcgaacccttctttttttcggaaccatcgcaaacaattctgtgccacgtcatagacgatttt 48227819  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  48227820 tctttgttcttctcatcaccctgaacgttaccctgattct 48227859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 51271012 - 51271151
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||||       |||||||||| |||||||||  ||| ||||||||| | ||||||    
T  51271012 gctcctcctcaacctcgagtgaatgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccgtgtcacgtcataggcgatttt 51271111  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  51271112 tctttgttcttctcatcaccctgaacgttaccctgattct 51271151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 44336907 - 44336776
Alignment:
Q  75 tcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgtt 174  Q
    |||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||  ||||||||||||| | ||||||||||||||    
T  44336907 tcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccgtgccacgtcataggcgatttttctttgtt 44336808  T
Q  175 cttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||| | | |||||||||||||||||    
T  44336807 cttctcatcaccttgaacgttaccctgattct 44336776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 49397855 - 49397994
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||        |||||||||||||||||||| ||||||| ||||||   ||||||    
T  49397855 gctcatcctcaacctcgactgattgtacaccggcaccatcagacccttttttttttcggaaccatcacaaacaattctgtgccatgtcatagacgatttt 49397954  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| ||||||| |||||||||    
T  49397955 tctttgttcttctcatcaccctgaacgttatcctgattct 49397994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 13634111 - 13633971
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||   | |||||||||    
T  13634111 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatgtcttcaaatgattcaaaatcgca 13634012  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
        ||| | | ||||| ||||||||| |||||||||||||    
T  13634011 acttggatactcaaaaacgcaacaatggagttttggaaact 13633971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 490 - 618
Target Start/End: Original strand, 44598745 - 44598873
Alignment:
Q  490 aaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaata 589  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||||   |||||  |    
T  44598745 aaaacaacaatgcaataggattaaaaaaacttacttgtttttgttattgaaattggcttggaatgacttgaaatagctcaaaatcgcaccttggagatca 44598844  T
Q  590 aaaaatgcaacaatgaagttttggaaact 618  Q
    ||||| | ||||||| |||||| ||||||    
T  44598845 aaaaacgtaacaatggagtttttgaaact 44598873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 13974136 - 13974268
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||| || |||||||||||||||||||||||||||||         ||||||||||||||||||||||||| || |||||| | ||||||    
T  13974136 ctcctcctcaacctggagtgattgtacaccggcaccttcaaaccctttttttttttcggaaccatcacaaacaattttgtgtcatgtcataagcgatttt 13974235  T
Q  167 tctttgttcttctcatcatcctaaacgttaccc 199  Q
    | |||||||||||||||| ||| ||||||||||    
T  13974236 tatttgttcttctcatcaccctcaacgttaccc 13974268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 478 - 556
Target Start/End: Original strand, 18974958 - 18975036
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgac 556  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  18974958 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgatcgaaattggcttggaatgac 18975036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 29437413 - 29437527
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc---------taacctaaactatcctcacatatcattaaatcataaaatcaa 423  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||| | |||||||||||||||||||||||    
T  29437413 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattctaaccattctaacctaaactatcctaatatatcattaaatcataaaatcaa 29437512  T
Q  424 taaaacatatataat 438  Q
    |||||| ||||||||    
T  29437513 taaaacctatataat 29437527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 41803435 - 41803574
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||  ||  | |||||| | ||||||    
T  41803435 gctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttcttttttttggaaccatcacaaacaatttcttgttatgtcataggcgatttt 41803534  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||   || | ||||||||||||||    
T  41803535 tctttgttcttctcatcactatagatgttaccctgattct 41803574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 618
Target Start/End: Complemental strand, 27485267 - 27485139
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| |||||||| ||| |||| ||| ||||||||||   |||||      
T  27485267 caaaacaacaatgcaataggattaaaaaaa-ttacttgtttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgcacattggagatc 27485169  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  27485168 aaaaaacgtaacaatggagttttggaaact 27485139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 65 - 204
Target Start/End: Complemental strand, 27485722 - 27485581
Alignment:
Q  65 ctgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtga 162  Q
    |||||||||||||||||||| ||||||||||||   |||||| ||||||||         |||||||||| |||||||||  ||||||||||||| | ||    
T  27485722 ctgctcctcctcaacctcgagtgattgtacacctataccttcgaacccttctttttttttcggaaccatcgcaaacaattacgtgccacgtcataggcga 27485623  T
Q  163 tttttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  27485622 tttttctttgttcttctcatcaccctgaacgttaccctgatt 27485581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 6436989 - 6437072
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||  |||||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||    
T  6436989 cggaaccatcacaaacaattccgtgccatgtcataggcgatttttctttgttcttctcatcaccctaaacgttaccctgattct 6437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 42570450 - 42570375
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctata 448  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  42570450 taacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaacctatataatcgaacctata 42570375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 29437142 - 29437280
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||| |||| |||||||||||| |||||||| |||||||        || |||||||||||||||||| |||||| ||||||   ||||||    
T  29437142 gctcctcctcaacttcgagtgattgtacaccagcaccttcgaaccctttttttttccg-aaccatcacaaacaatttcgtgccatgtcatagacgatttt 29437240  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| || ||||||||||||||    
T  29437241 tctttgttcttctcatcaccctgaatgttaccctgattct 29437280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 35525194 - 35525056
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||        | ||||||||||||||||||   ||||| |||||| | | ||||    
T  35525194 gctcctcctcaacctcgagtgattgtacaccggcaccttcaaaccctt-attttttcagaaccatcacaaacaattccatgccatgtcataggcggtttt 35525096  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    || ||||||||||||||| ||| |||||||||| ||||||    
T  35525095 tcgttgttcttctcatcaccctgaacgttaccccgattct 35525056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 509 - 618
Target Start/End: Original strand, 48228169 - 48228279
Alignment:
Q  509 attcaaaaaacttacttgtttt-tgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaag 607  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||  || ||||||||||   ||| ||||||||| ||||||||| ||    
T  48228169 attcaaaaaacttacttgttttttgtgattgaaattggcttggaatgccttcaaatgactcaaaatcgcaccttggataataaaaaacgcaacaatggag 48228268  T
Q  608 ttttggaaact 618  Q
    |||||||||||    
T  48228269 ttttggaaact 48228279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 44336591 - 44336355
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||  ||||||         ||||| ||||| ||||||||| |||| |||||||          
T  44336591 ctaacaattctaacctaaactatcctaacatatcataaaatcaacaaatca---------atatagtcgaacctatataatcgaaatttaacaa-aaaaa 44336502  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          |||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||||  || |||    
T  44336501 aaaaaacaattcaaccgcaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaataactcaaa 44336402  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    || ||||   |||||  |||||| | ||||||  |||||||||||||    
T  44336401 attgcacattggagatcaaaaaacgtaacaattgagttttggaaact 44336355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 46142006 - 46141937
Alignment:
Q  484 gaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaat 553  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  46142006 gaccacaaaacaacaatgcaataggattcaaaaaactcacttgtttttgtgattgaaattggcttggaat 46141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 46142452 - 46142307
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn------cggaaccatcacaaacaattttgtgccacgtcatatgt 160  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||              || |||||||||||||||||||||||||  ||||| |     
T  46142452 gctcctcctcaacctgaactgattgtacaccggcaccttcgaacccttttttttttttttttcgaaaccatcacaaacaattttgtgccatatcataggc 46142353  T
Q  161 gatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  46142352 gatttttctttgttcttctcatcaccctgaacgttaccctgattct 46142307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 13634412 - 13634277
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||        |||||||||| |||||||||   ||||||||||||   ||||||||||    
T  13634412 ctcctcaacctcgagtgattgtacactggcaccttcaaaccattttttttttcggaaccatcgcaaacaattccatgccacgtcatagaagatttttctt 13634313  T
Q  171 tgttcttctcatcatcctaaacgttaccctgattct 206  Q
    | |||||||||||| | | |||||||||||||||||    
T  13634312 ttttcttctcatcaccatgaacgttaccctgattct 13634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 14172426 - 14172356
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  14172426 ctaacaattctaacctaaattatcctaacatatcatgaaatcataaaatcaataaaacctatataatcgaa 14172356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 486 - 558
Target Start/End: Original strand, 13148889 - 13148961
Alignment:
Q  486 ccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  13148889 ccacaaaacaacgatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcctggaatgactt 13148961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 29761177 - 29761062
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| |||||||||  ||||||||||||| | ||||||    
T  29761177 gctcctcctcaacctcgagtgattgtacac-ggcaccttcgaacccttctttttt-cggaaccatcgcaaacaattccgtgccacgtcataggcgatttt 29761080  T
Q  167 tctttgttcttctcatca 184  Q
    ||||| ||||||||||||    
T  29761079 tctttattcttctcatca 29761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 42570788 - 42570646
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn---cggaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |||           ||||||||||||||||||||  |||||| |||||| |  ||    
T  42570788 gctcctcctcaacctcgactgattgtacgccggcaccttcgaactctttttttttttttcggaaccatcacaaacaattccgtgccatgtcataggcaat 42570689  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||| ||||||| ||| ||| |||||||||||||    
T  42570688 ttttctttgttctactcatcaccctgaacattaccctgattct 42570646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 13284687 - 13284785
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacat 221  Q
    ||||||||||||||||||||  ||| || |||||| | ||||||||||| ||||||||||||  || ||||||||||||||||| | ||||||||||||    
T  13284687 cggaaccatcacaaacaattccgtgtcatgtcataggcgatttttctttcttcttctcatcacactgaacgttaccctgattctgatacatatctacat 13284785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 24363063 - 24362924
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||        ||||||||||||||||||||   || || |||||| | ||||||    
T  24363063 ctcctcctcaaccccgactgattgtacaccggcaccttcgaacgcttcttttttttcggaaccatcacaaacaattccatgtcatgtcataggcgatttt 24362964  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||||| |||||| ||| |||||||||||| ||||    
T  24362963 tctttcttcttgtcatcaccctgaacgttaccctggttct 24362924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 46142105 - 46142035
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    ||||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||||    
T  46142105 ctaaccattctaacctaaactatcctaatatatcataaaatcataaaatcaataaaacctatataatcgaa 46142035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 14440872 - 14440939
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  14440872 cacaaaataacaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 14440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 18974591 - 18974674
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||  |||||| |||||| |  ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  18974591 cggaaccatcacaaacaattacgtgccatgtcataggcaatttttctttgatcttctcatcaccctgaacgttaccctgattct 18974674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 26633869 - 26633802
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatc 439  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  26633869 ctaaccattctaacctacactatcctaacatatcataaaatcataaaatcaataaaacctatataatc 26633802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 485 - 587
Target Start/End: Complemental strand, 24362524 - 24362426
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaagga 584  Q
    |||||||||||||||| ||||||||||||||||    ||||||||||| |||||||||| | |||||||| ||| |||| ||| ||||||||||  ||||    
T  24362524 accacaaaacaacaatgcaataggattcaaaaa----acttgtttttgcgattgaaattagattggaatggcttgaaatggctgaaaatcgcacatagga 24362429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 558
Target Start/End: Complemental strand, 38043672 - 38043616
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  38043672 caataggattcaaaaaacttacttgattttgtgtttgaaattggcttggaatgactt 38043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 35524974 - 35524907
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattgg 545  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  35524974 caattcgaccacaaaacagcaatgcaataggattcaaaaaacttaattatttttgtgatttaaattgg 35524907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 29437551 - 29437597
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttact 524  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  29437551 caatttgaccacaaaacaacaatgcaataggattcaaaaaacttact 29437597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 554
Target Start/End: Complemental strand, 33285917 - 33285860
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  33285917 caatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 33285860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 558
Target Start/End: Complemental strand, 39855712 - 39855655
Alignment:
Q  502 caataggattcaaaaaacttacttg-tttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  39855712 caataggattcaaaaaacttacttgatttttgtgcttgaaattggcttggaatgactt 39855655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 13974408 - 13974456
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  13974408 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 13974456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 29760919 - 29760871
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  29760919 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 29760871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 46142175 - 46142127
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  46142175 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 46142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 51271284 - 51271332
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  51271284 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 51271332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 6437200 - 6437239
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6437200 aattctacaacgattcatcaaaacctaaacctaacaattc 6437239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 18974798 - 18974837
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18974798 aattctacaacgattcatcaaaacctaaacctaacaattc 18974837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 23344242 - 23344309
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| |||||| |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  23344242 cacaaaatagcaatgcaatagaattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 23344309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 26633930 - 26633891
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26633930 aattctacaacgattcatcaaaacctaaacctaacaattc 26633891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 36911363 - 36911402
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36911363 aattctacaacgattcatcaaaacctaaacctaacaattc 36911402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 49260164 - 49260097
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  49260164 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 49260097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 41803718 - 41803755
Alignment:
Q  344 ttctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41803718 ttctacaacgattcatcaaaacctaaacctaacaattc 41803755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 14172487 - 14172439
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  14172487 aattctaacaattctacaccgattcatcaaaacctaaacctaacaattc 14172439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 24362803 - 24362755
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  24362803 aattctaacaattctacaacaattcatcaaaacctaaacctaacaattc 24362755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 27485446 - 27485398
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  27485446 aattctaacaattctacaacgattcatcaaaacttaaacctaacaattc 27485398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 44336643 - 44336604
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  44336643 aattctacaacgattcatcaaaacttaaacctaacaattc 44336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 48227995 - 48228034
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  48227995 aattctaaaacgattcatcaaaacctaaacctaacaattc 48228034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 19162363 - 19162310
Alignment:
Q  153 tcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||||||||||||| ||||| |||||| ||| |||||||||||||||||    
T  19162363 tcataggtgatttttcttttttcttttcatcaccctcaacgttaccctgattct 19162310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 26494728 - 26494789
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatca 184  Q
    ||||| ||||||||||||||| ||| || || ||| | ||||||||||||||||||||||||    
T  26494728 cggaatcatcacaaacaatttcgtgtcatgtaataggcgatttttctttgttcttctcatca 26494789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 27485376 - 27485323
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  27485376 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 27485323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 557
Target Start/End: Original strand, 13285198 - 13285253
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgact 557  Q
    |||||| |||||||| ||||||||| |||||||||||||||||  ||| |||||||    
T  13285198 caatagaattcaaaacacttacttgattttgtgattgaaattgccttgaaatgact 13285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 26494667 - 26494706
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttc 106  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  26494667 gctcctcctcaacttcgactgattgtacacctgcaccttc 26494706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 13974469 - 13974511
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||    
T  13974469 ctaacaattctaaccaaaactatcctaacatatcataaaatca 13974511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 18974890 - 18974943
Alignment:
Q  411 atcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaa 465  Q
    ||||||||||||||||||| ||||| ||| || |||||||||||||| |||||||    
T  18974890 atcataaaatcaataaaacctatat-atcaaacctatataattgaaatttaacaa 18974943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 23343726 - 23343768
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaa 109  Q
    |||||||||||||||||| ||||| |||||| |||||||||||    
T  23343726 gctcctcctcaacctcgaatgattatacaccagcaccttcaaa 23343768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 333 - 371
Target Start/End: Complemental strand, 42570512 - 42570474
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaac 371  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  42570512 aattctaacaattctacaacgattcatcaaaacctaaac 42570474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 13974563 - 13974616
Alignment:
Q  489 caaaacaacaatacaataggattc-aaaaaacttacttgtttttgtgattgaaa 541  Q
    |||||||||||| ||||| ||||| |||||||||| || |||||||||||||||    
T  13974563 caaaacaacaatgcaatatgattcaaaaaaacttatttatttttgtgattgaaa 13974616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 558
Target Start/End: Complemental strand, 14771330 - 14771289
Alignment:
Q  517 aacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    |||||||||| ||||||| |||||||||| ||||||||||||    
T  14771330 aacttacttgattttgtgcttgaaattggcttggaatgactt 14771289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 413
Target Start/End: Original strand, 51271345 - 51271386
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatc 413  Q
    ||||||||||||||||||| |||||| ||||||||| |||||    
T  51271345 ctaacaattctaacctaaattatcctaacatatcataaaatc 51271386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 12790270 - 12790226
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||| ||||| |||||| ||||||||||| |||||    
T  12790270 ctcctcaacctcgaatgattatacaccagcaccttcaaatccttc 12790226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 15355785 - 15355737
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  15355785 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 15355737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 35585903 - 35585855
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  35585903 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 35585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 442
Target Start/End: Original strand, 41803778 - 41803839
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    |||| |||||||||||||||||||| ||||        ||||||||||||||||||| ||||||||||||    
T  41803778 taaccattctaacctaaactatcctaacat--------atcataaaatcaataaaacctatataatcgaa 41803839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 2e-72; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 333 - 618
Target Start/End: Original strand, 40703833 - 40704127
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaa---------ttctaacctaaactatcctcacatatcattaaatcataaaatcaa 423  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||| ||||||| |||||||||||||||||    
T  40703833 aattctaacaattctacaacgattcatcaaaacctaaacctaacaaatctaatcattctaacttaaactatcctaacatatcgttaaatcataaaatcaa 40703932  T
Q  424 taaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnnnnnn-caatttgaccacaaaacaacaatacaataggattcaaaaaactta 522  Q
    |||||| |||||||||||| |||| ||||||||| |||||||             ||||||||||||||||||||||| ||||| ||||||||| |||||    
T  40703933 taaaacctatataatcgaacctatgtaattgaaatttaacaaaaaaaaaaaaaaacaatttgaccacaaaacaacaatgcaatatgattcaaaa-actta 40704031  T
Q  523 cttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||| |||||||||||||    
T  40704032 cttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcacaaagaagaacaaaaaacgcaacaatggagttttggaaact 40704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 28168324 - 28168570
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||| ||||||||| |||| |||||||          
T  28168324 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatctatataatcgaacctatataatcgaaatttaacaaaaaaaa 28168423  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||    
T  28168424 taaaaacaattcgaccaaaaaacaacaattcaatagggctcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaa 28168523  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||  |||||||||||||| ||||||||||||||||| |||||    
T  28168524 atcgcacccaggagaataaaaaacgcaacaatgaagttttgaaaact 28168570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 333 - 618
Target Start/End: Original strand, 42604919 - 42605202
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacata 432  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||        |||||||||||||| ||    
T  42604919 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattctaacctaaattatcctaacatatcat--------aaaatcaataaaaccta 42605010  T
Q  433 tataatcgaatctatataattgaaagttaacaagnnnnnnnnnnn------caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttg 526  Q
    |||||||||| |||| ||||||||| |||||||                  ||||||||||||||||||||| | ||||| ||||||||||||||||||     
T  42605011 tataatcgaacctatgtaattgaaatttaacaaaaaaaaacaaaaaacaaacaatttgaccacaaaacaacagtgcaatatgattcaaaaaacttactta 42605110  T
Q  527 tttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||| ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  42605111 tttctgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttggaaact 42605202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 333 - 618
Target Start/End: Complemental strand, 41855731 - 41855469
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacata 432  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||        ||||||||||||||||||       
T  41855731 aattttaacaattctacaacgattcatcaaaacctaaacctaacaattctaacttaaaatatcctaacata--------tcataaaatcaataaaac--- 41855643  T
Q  433 tataatcgaatctatataattgaaagttaacaagnnnnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttg 532  Q
               |||||||||||||| |||||||             |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  41855642 -----------ctatataattgaaatttaacaaaaaaaaaaaaaa-aatttgaccacaaaacaacaatgcaatgggattcaaaaaacttacttgtttttg 41855555  T
Q  533 tgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||| |||||    
T  41855554 tgattgaaattggtttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttgaaaact 41855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 41855998 - 41855843
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||||||||||||| |||||||||||||| ||||||||    
T  41855998 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattctgtgccacgtcataggtgatttt 41855899  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  41855898 tctttgttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 41855843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 22550596 - 22550832
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||         |||||||| ||||||||| |||| |||||||          
T  22550596 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaata---------taatcgaacctatataatcgaaatttaacaa-caaaa 22550685  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||    
T  22550686 aacaaacaattcgaccacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaattgctcaaa 22550785  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    | ||||  ||||| ||| ||||| ||||||||| |||||||||||||    
T  22550786 accgcagcaaggataatcaaaaacgcaacaatggagttttggaaact 22550832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 40703618 - 40703717
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  40703618 cggaaccatcacaaacaattttgtgccacgtcataggtgatttttctttgttcttctcatcaccctaaacgttaccctgattctgagacatatctacatt 40703717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 41016755 - 41016519
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  41016755 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 41016666  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||  || |||    
T  41016665 aagaaacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttaattgtttttgtgattgaaattggcttggaatggcttcaaatgactcaaa 41016566  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||||||||| ||||||||| |||||||||||||    
T  41016565 atcgcaccttggataataaaaaacgcaacaatggagttttggaaact 41016519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 41276274 - 41276413
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||       |||||||||| |||||||||  ||||||||||||| | ||||||    
T  41276274 gctcctcctcaacctcgagtgattatacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccgtgccacgtcataggcgatttt 41276373  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  41276374 tctttgttcttctcatcaccctgaacgttaccctgattct 41276413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 24862546 - 24862684
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    ||||||||||||||||| |||||||| ||| |||||||| ||||||||       |||||||||| ||||||||| |||||||||||||| | |||||||    
T  24862546 ctcctcctcaacctcgagtgattgtataccagcaccttcgaacccttctttttttcggaaccatcgcaaacaattatgtgccacgtcataggcgattttt 24862645  T
Q  168 ctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  24862646 ctttgttcttctcatcaccctgaacgttaccctgattct 24862684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 554
Target Start/End: Complemental strand, 18438980 - 18438793
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaac-----aag 466  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||| |||| |||||     ||     
T  18438980 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaacctatat-atcgaacctatataatcgaaatttaacaaaaaaaa 18438882  T
Q  467 nnnnnnnnnnncaatttgaccacaaaacaacaatacaata-ggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
               |||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18438881 aaacaaacaaacaattcaaccacaaaacaacaatgcaatagggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 18438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 15031441 - 15031302
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| |||||||||   |||||||||||| ||||||||    
T  15031441 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccacgtcataggtgatttt 15031342  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| ||| |||||||||||||||||    
T  15031341 tcttttttcttctcatcaccctgaacgttaccctgattct 15031302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 372 - 554
Target Start/End: Original strand, 38872672 - 38872845
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| |||||||||        ||||||||| |||| |||||| ||||| ||||||||| |||| |||||||          
T  38872672 ctaacaattctaacctaaactatcctaacatatcat--------aaaatcaatcaaacttatata-tcgaacctatataatcgaaatttaacaaaaaaaa 38872762  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
          ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38872763 aaaaaacaattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 38872845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 42604650 - 42604803
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| |    ||        || ||||||||||||||||  |||||||||||||| ||||||||    
T  42604650 gctcctcctcaacctcgagtgattgtacaccggcaccttcgatt--ttttttctttcgaaaccatcacaaacaatactgtgccacgtcataggtgatttt 42604747  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  42604748 tctctgttcttctcatcaccctgaacgttaccctgattctaagacatatttacatt 42604803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 65 - 204
Target Start/End: Complemental strand, 41016972 - 41016833
Alignment:
Q  65 ctgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||| ||||||||||||  ||||||||||||||||||||| ||||||||       |||||||||  |||||||||  |||||| |||||| | ||||    
T  41016972 ctgctcatcctcaacctcgtgtgattgtacaccggcaccttcgaacccttctttttttcggaaccattgcaaacaattacgtgccatgtcataggcgatt 41016873  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41016872 tttctttgttcttctcatcaccctaaacgttaccctgatt 41016833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 45065876 - 45066015
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||| ||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| ||||||||||  |||||||||||| ||||||||    
T  45065876 gctcctccccaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcatgccacgtcataggtgatttt 45065975  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| | | |||||||||||||||||    
T  45065976 tcttttttcttctcatcaccgtgaacgttaccctgattct 45066015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 26455514 - 26455643
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||| |||| ||| ||||||||||   |||||      
T  26455514 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggctgagaatgacttgaaatagctcaaaatcgcaccttggagatc 26455613  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||| ||||||| |||||||||||||    
T  26455614 aaaaaatgtaacaatggagttttggaaact 26455643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 18439299 - 18439162
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||       ||||||||||||||||||||  ||| || |||||| | ||||||    
T  18439299 gctcctcctcaacctggattgattgtacatcggcaccttcaaacccttctttttttcggaaccatcacaaacaattacgtgtcatgtcataggcgatttt 18439200  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||| ||| | |||||||||||||    
T  18439199 tctttgttcttctcatcaccctgagcgttaccctgatt 18439162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 45066189 - 45066329
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    
T  45066189 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgca 45066288  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| |||  ||||  |||||||| |||||||||||||    
T  45066289 ccttggataattcaaaacacaacaatggagttttggaaact 45066329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42467167 - 42467233
Alignment:
Q  1 acgagcatcaccaacttgttgcatagtacccatacgatcttccccttcaccagtttcaagctctctg 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42467167 acgagcatcaccaacttgttgcatagtacccatacgatcttccccttcaccagtttcaagctctctg 42467233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 41276724 - 41276853
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| ||||||| ||   |||||      
T  41276724 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgtaccttggagatc 41276823  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||| |||||||||||||    
T  41276824 aaaaaacgtaacaatggagttttggaaact 41276853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 15031128 - 15030989
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    
T  15031128 caattcgaccacaaagcaacaatgcaataggattcaaaaa-cttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgca 15031030  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| | |||||||||||    
T  15031029 ccttggataattaaaaacgcaacaatggaattttggaaact 15030989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 38872355 - 38872495
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||||||||||||| || ||||||||||||||||||||| ||| ||||        || |||||||||||||||||| |||||| |||||| | |||||    
T  38872355 gctcctcctcaacctggattgattgtacaccggcaccttcgaactcttcttttttttcgaaaccatcacaaacaatttcgtgccatgtcataggcgattt 38872454  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| ||||||||| |||||||    
T  38872455 ttctttgttcttctcatcaccctgaacgttaccttgattct 38872495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 484374 - 484235
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       || ||||||| |||||||||   ||||| |||||| |||| |||    
T  484374 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcgaaaccatcgcaaacaattccatgccatgtcataggtgacttt 484275  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  484274 tcttttttcgtctcatcatcgtgaacgttaccctgattct 484235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 484157 - 483921
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  484157 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 484068  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  484067 aacatacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 483968  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  483967 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 483921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 22550265 - 22550402
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||| |  |||||||||||||||| ||||||||||||       || ||||||| ||||||||| |||||||||||||| | ||||||    
T  22550265 gctcctcctcaacctc-agagattgtacaccggcacattcaaacccttctttttt-cgtaaccatcgcaaacaattctgtgccacgtcataggcgatttt 22550362  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||| ||||    
T  22550363 tctttgttcttctcatcaccctgaacgttaccctggttct 22550402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 44052064 - 44052193
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||| |||| ||| ||||| ||||   |||||      
T  44052064 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggcttgaaatagctcaaaatggcaccttggagatc 44052163  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||| | ||||||  |||||||||||||    
T  44052164 aaaaaacgtaacaatagagttttggaaact 44052193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 28168068 - 28168151
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||| |||||| |||||| |  ||||||||||||||||||||||| ||| |||||||||||||||||    
T  28168068 cggaaccatcacaaacaatttcgtgccatgtcataggcaatttttctttgttcttctcatcaccctgaacgttaccctgattct 28168151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 44051631 - 44051773
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn---cggaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    |||||| ||||||||||| ||||||||||||||||| ||| ||||||||          || ||||||| ||||||||| |||||||||||||| | |||    
T  44051631 gctccttctcaacctcgagtgattgtacaccggcactttcgaacccttcttttttttttcgaaaccatcgcaaacaattctgtgccacgtcataggcgat 44051730  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||| | | ||| |||||||||||||||||    
T  44051731 ttttctttgttcttctccttaccctgaacgttaccctgattct 44051773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 442
Target Start/End: Original strand, 44051964 - 44052030
Alignment:
Q  376 caattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||||||||    
T  44051964 caattctaacctaaactatcctaacatatcatagaatcataaaatcaataaaatctatataatcgaa 44052030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 26455336 - 26455384
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26455336 aattataacaattctacaacgattcatcaaaacctaaacctaacaattc 26455384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 38032447 - 38032380
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  38032447 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 38032380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 24862878 - 24862931
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  24862878 ctaacaattctaacctaaactatcctaacatatcataaaatcatgaaatcaata 24862931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 24862817 - 24862865
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  24862817 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 24862865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 26488200 - 26488256
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||    
T  26488200 caataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatgactt 26488256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 28168263 - 28168311
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  28168263 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 28168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 41276546 - 41276594
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  41276546 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 41276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 19241214 - 19241147
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  19241214 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttgtgtttgaaattggcttggaatg 19241147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 19314398 - 19314331
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  19314398 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttgtgtttgaaattggcttggaatg 19314331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 28168002 - 28168049
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaaccctt 114  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  28168002 gctcctcctcaacctcgactgattgtacaccgacaccttcgaaccctt 28168049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 558
Target Start/End: Complemental strand, 31170635 - 31170581
Alignment:
Q  504 ataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||    
T  31170635 ataggattcaaaacacttacttgattttgtgcttgaaattggcttggaatgactt 31170581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 26488318 - 26488370
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  26488318 caataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatg 26488370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 44051906 - 44051954
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  44051906 aattctaacaattctacaacgattcatctaaacctaaacctaacaattc 44051954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 18439032 - 18438993
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  18439032 aattctacatcgattcatcaaaacctaaacctaacaattc 18438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 531
Target Start/End: Original strand, 14120404 - 14120457
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgttttt 531  Q
    |||||| | ||||||||| |||||||||||||||||||| ||||||||| ||||    
T  14120404 caatttaatcacaaaacagcaatacaataggattcaaaacacttacttgatttt 14120457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 26455406 - 26455448
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  26455406 ctaaccattctaacctaaactatcctaacatatcataaaatca 26455448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 41276616 - 41276658
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  41276616 ctaaccattctaacctaaactatcctaacatatcataaaatca 41276658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 45066093 - 45066135
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  45066093 ctaaccattctaacctaaactatcctaacatatcataaaatca 45066135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 14120301 - 14120334
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaa 375  Q
    ||||||||||| ||||||||||||||||||||||    
T  14120301 aattctacaacaattcatcaaaacctaaacctaa 14120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 40703559 - 40703599
Alignment:
Q  66 tgctcctcctcaacctcgactgattgtacaccggcaccttc 106  Q
    ||||||||||||||||| | ||||||||||||| |||||||    
T  40703559 tgctcctcctcaacctctagtgattgtacaccgacaccttc 40703599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 5e-70; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 333 - 616
Target Start/End: Complemental strand, 41497852 - 41497580
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacata 432  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||    
T  41497852 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattctaacctaaattatcctaacatatcataaaatcataaaatcaataaaaccta 41497753  T
Q  433 tataatcgaatctatataattgaaagttaacaagnnnnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttg 532  Q
    |||||| |||  |  | ||   |||   |||||            |||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  41497752 tataattgaaatttaacaacaaaaaaaaaacaa-----------acaatttgaccacaaaacaacgatgcaataggattcaaaaaacttacttatttttg 41497664  T
Q  533 tgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaa 616  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  41497663 tgattgaaattggctttgaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttggaaa 41497580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 40675982 - 40675843
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  40675982 caatttgaccacaaaacaacaatgcaataggattcaaaaaactgacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgca 40675883  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||||||| ||||||| ||||||| |||||||||||||    
T  40675882 c-taggagaatcaaaaatgtaacaatgcagttttggaaact 40675843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 578
Target Start/End: Original strand, 3942914 - 3943118
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||| ||||||||| |||| |||||||          
T  3942914 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatctatataatcgaacctatataatcgaaatttaacaa--aaaa 3943011  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          |||||  ||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| |||| ||| |||    
T  3943012 aacaaacaattcaaccgcaaaacaacaatgcaataggattaaaaaaatttacttgtttttgtgattgaaattggcttggaatgacttgaaatagctcaaa 3943111  T
Q  572 atcgcac 578  Q
    |||||||    
T  3943112 atcgcac 3943118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 23786371 - 23786230
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  23786371 caattcgaccacaaaacaacaatgcaataggatttagaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgca 23786272  T
Q  578 cgaaggagaataa-aaaatgcaacaatgaagttttggaaact 618  Q
      ||||||||||| |||||||||||||| ||||||| |||||    
T  23786271 gcaaggagaataaaaaaatgcaacaatggagttttgaaaact 23786230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 41498118 - 41497963
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| |||       |||||||||||||||||||| ||||||| |||||| | ||||||    
T  41498118 gctcctcctcaacctggactgattgtacaccggcaccttcgaacctttcattttttcggaaccatcacaaacaattatgtgccatgtcataggcgatttt 41498019  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||| | | ||||||||||||||||| |||||||||||||||    
T  41498018 tctttgttcttctcatcaccatgaacgttaccctgattctgagacatatctacatt 41497963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 2918366 - 2918223
Alignment:
Q  65 ctgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||        || ||||||||||||||||| ||||||| |||||| ||||||    
T  2918366 ctgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttatttttttcgaaaccatcacaaacaattctgtgccatgtcataggtgatt 2918267  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgattctaa 208  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||    
T  2918266 tttctttattcttctcatcaccctgaacgttaccctgattctaa 2918223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 486 - 618
Target Start/End: Original strand, 8268585 - 8268717
Alignment:
Q  486 ccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggag 585  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| |||||||| |||||||||   |||||    
T  8268585 ccacaaaacaacaattcaatagaattcaaaaaacttacttgtttttgtgattgaaattggcttagaatggcttgaaattgctcaaaatcgcatctaggag 8268684  T
Q  586 aataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||| ||||||||| |||||||||||||    
T  8268685 aataaaaaacgcaacaatggagttttggaaact 8268717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 35493074 - 35493309
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| |||||||||        |||||||| ||||| |||||||||||| ||||||||| |||| |||||||          
T  35493074 ctaaccattctaacctaaactatcctaacatatcat--------aaaatcaagaaaacctatataatcgaacctatataatcgaaatttaacaa---aaa 35493162  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||    
T  35493163 aaaaaacaattcgaccacaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaa 35493262  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||| ||    |||||  |||||| | ||||||| |||||||||||||    
T  35493263 atcacaacttggagatcaaaaaacgtaacaatggagttttggaaact 35493309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 43493112 - 43493252
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  43493112 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttgcttgtttttgtgattgaaattggcttggaatggcttgaaattgctcaaaatcgca 43493211  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  ||||||  |||||||| ||||||| |||||| ||||||    
T  43493212 cctaggagatcaaaaaatgtaacaatggagtttttgaaact 43493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 554
Target Start/End: Complemental strand, 2918022 - 2917842
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||| |||| |||||||          
T  2918022 ctaacaagtctaacctaaactatcctaacatatcatgaaatcttaaaatcaataaaacctatataatcgaacctatataatcgaaatttaacaa--aaaa 2917925  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
          ||||| |||||||||||||||||  |||||||||||||| | ||||||||||||||| |||||||||| ||||||||    
T  2917924 atcaaacaattcgaccacaaaacaacaatgtaataggattcaaaacatttacttgtttttgtgcttgaaattggcttggaatg 2917842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 16583014 - 16583155
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||   ||||    
T  16583014 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaattttgtgccacgtcatagacgatt 16583113  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  16583114 tttctttgttcttctcatcaccctgaacgttaccctgattct 16583155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 23409332 - 23409469
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||||| |||||||||||| |||||||||    
T  23409332 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgttt--gtgattgaaattggcttggaatggcttcaaattgctcaaaatcgca 23409429  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||||||| ||||| | ||||||| |||||||||||||    
T  23409430 cctaggagaat-aaaaacgtaacaatggagttttggaaact 23409469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 22002916 - 22003055
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| ||||||||||  |||||||||||| ||||||||    
T  22002916 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcatgccacgtcataggtgatttt 22003015  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| ||| |||||||||||||||||    
T  22003016 tcttttttcttctcatcaccctgaacgttaccctgattct 22003055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 43492665 - 43492803
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||       |||||||||||||||||||| ||||||| |||||| | |||||||    
T  43492665 ctcctcgtcaacctggactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgccatgtcataggcgattttt 43492764  T
Q  168 ctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||| ||| ||| |||||||||||||||||    
T  43492765 ctttgttcttctcttcaccctgaacgttaccctgattct 43492803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 3942591 - 3942730
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||||       || ||||||| ||||||||| |||||||||||||| | ||||||    
T  3942591 gctcctcctcaacctcaagtgattgtacaccggcaccttcgaacccttctttttttcgaaaccatcgcaaacaattctgtgccacgtcataggcgatttt 3942690  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||| ||||||||||| ||| |||||||||||||||||    
T  3942691 tctttgctcttctcatcaccctgaacgttaccctgattct 3942730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 478 - 616
Target Start/End: Complemental strand, 19470202 - 19470065
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| | || |||||| |||||||||||| |||||||| |||||||||    
T  19470202 caattcgaccacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtaaatggaattggcttggaatgacttgaaattgctcaaaatcgca 19470103  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaa 616  Q
    |  |||| || |||||||| ||||||| |||||||||||    
T  19470102 cctagga-aaaaaaaaatgtaacaatggagttttggaaa 19470065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 28476596 - 28476757
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| |||||||||   |||||||||||| ||||||||    
T  28476596 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccacgtcataggtgatttt 28476695  T
Q  167 tctttgttcttctcatcatcctaaacgttacc------ctgattctaagacatatctacatt 222  Q
    ||||| |||||||||||| ||| |||||||||      |||||||| |||||||||||||||    
T  28476696 tcttttttcttctcatcaccctgaacgttaccatcattctgattctgagacatatctacatt 28476757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 23408925 - 23409065
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||        | |||||||||||||||||| |||| || |||||| | |||||    
T  23408925 gctcctcctcaaactcgactgattgtacaccggcaccttcgaacccttcttttttttcagaaccatcacaaacaattctgtgtcatgtcataggcgattt 23409024  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| || ||||||||||||||    
T  23409025 ttctttgttcttctcatcaccctgaatgttaccctgattct 23409065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 3936421 - 3936282
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  3936421 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 3936322  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  3936321 tcttttttcgtctcatcatcgtgaacgttaccctgattct 3936282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 17425880 - 17426019
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  17425880 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 17425979  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  17425980 tcttttttcgtctcatcatcgtgaacgttaccctgattct 17426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 43983816 - 43983955
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  43983816 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 43983915  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  43983916 tcttttttcgtctcatcatcgtgaacgttaccctgattct 43983955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 3936204 - 3935968
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  3936204 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 3936115  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  3936114 aacatacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 3936015  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   | | ||| ||||| ||||||||| |||||||||||||    
T  3936014 atcgcaccttgaaaaattaaaaacgcaacaatggagttttggaaact 3935968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 17426097 - 17426333
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  17426097 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 17426186  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  17426187 aacatacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 17426286  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   | | ||| ||||| ||||||||| |||||||||||||    
T  17426287 atcgcaccttgaaaaattaaaaacgcaacaatggagttttggaaact 17426333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 22003229 - 22003369
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    
T  22003229 caattcgaccacaaagcaagaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgca 22003328  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| |||  |||| ||||||||  |||||||||||||    
T  22003329 ccttggataatttaaaacgcaacaattgagttttggaaact 22003369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 35492736 - 35492877
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn----cggaaccatcacaaacaattttgtgccacgtcatatgtga 162  Q
    |||||||||||||||||| | ||||||||||||||||||| |||| ||            |||||||||||||||||||||||||||||||||||   ||    
T  35492736 gctcctcctcaacctcgagtaattgtacaccggcaccttcgaaccttttttttttcttttcggaaccatcacaaacaattttgtgccacgtcatagacga 35492835  T
Q  163 tttttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  35492836 tttttctttgttcttctcatcaccctgaacgttaccctgatt 35492877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 19470621 - 19470482
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| ||||||||||||||||  |||||| ||||||||       |||||||||||||||||||| |||| || ||||||   ||||||    
T  19470621 gctcctcctcaacctggactgattgtacaccgagaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgtcatgtcatagacgatttt 19470522  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| | | |||||||||||||||||    
T  19470521 tctttattcttctcatcaccttgaacgttaccctgattct 19470482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 28476895 - 28477035
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| || |||| || ||||||||| ||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    
T  28476895 caattcgaccacaaagcaccaatgcagtaggattcacaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgca 28476994  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
        ||| ||| ||||| ||||||||| |||||||||||||    
T  28476995 acttggataatcaaaaacgcaacaatggagttttggaaact 28477035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 23786787 - 23786643
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-----cggaaccatcacaaacaattttgtgccacgtcatatgtg 161  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||             |||||||||| ||||||||| ||||||||| |||| | |    
T  23786787 gctcctcctcaacctcgagtgattgtacactggcaccttcgaaccctttttttttctttttcggaaccatcgcaaacaattctgtgccacgccataggcg 23786688  T
Q  162 atttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  23786687 atttttctttgttcttctcatcaccctgaacgttaccctgattct 23786643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 578
Target Start/End: Original strand, 16583432 - 16583522
Alignment:
Q  489 caaaacaacaatacaataggattcaaaa-aacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcac 578  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||    
T  16583432 caaaacaacaatgcaataggattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaatagctcaaaatcgcac 16583522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 563
Target Start/End: Complemental strand, 39798688 - 39798603
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaat 563  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||    
T  39798688 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttaaaat 39798603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 14181673 - 14181737
Alignment:
Q  490 aaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14181673 aaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 14181737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 618
Target Start/End: Complemental strand, 29090811 - 29090681
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggaga-a 587  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||||  || |||| ||| ||||||||||   |||||      
T  29090811 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtggttgaaattggcttggaatgggttgaaatagctcaaaatcgcacattggagatc 29090712  T
Q  588 taaaaaatgcaacaatgaagttttggaaact 618  Q
     |||||| | ||||||| |||||||||||||    
T  29090711 aaaaaaacgtaacaatggagttttggaaact 29090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 39798985 - 39798846
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||| |||       | |||||||| |||||||||   |||||||||||| | ||||||    
T  39798985 gctcctcctcaaccgcgagtgattgtacactggcaccttcgaaccattctttttttcagaaccatcgcaaacaattccatgccacgtcataggagatttt 39798886  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| | | |||||||||||||||||    
T  39798885 tcttttttcttctcatcaccatgaacgttaccctgattct 39798846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 618
Target Start/End: Original strand, 34639152 - 34639281
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    ||||||||||||  ||||  ||| ||||||||||||||||||||| ||||||||||| |||||||| ||| |||| ||| ||||||||||   |||||      
T  34639152 caaaacaacaatgtaataaaattaaaaaaacttacttgtttttgttattgaaattggcttggaatggcttgaaatagctcaaaatcgcaccttggagatc 34639251  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||| ||||||| ||||| |||||||    
T  34639252 aaaaaatgtaacaatggagtttaggaaact 34639281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 43984129 - 43984269
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||||||||    
T  43984129 caattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgca 43984228  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |     | ||| ||||| ||||||||| |||||||||||||    
T  43984229 ccttcaaaaattaaaaacgcaacaatggagttttggaaact 43984269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 40676418 - 40676277
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn----cggaaccatcacaaacaattttgtgccacgtcatatgtga 162  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||||            ||||||||||||||||||||| ||| || |||||| |  |    
T  40676418 gctcctcctcaaccttgactgattgtacaccggcaccttcgaatccttttttttcttttccggaaccatcacaaacaatttcgtgtcatgtcataggcaa 40676319  T
Q  163 tttttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||    
T  40676318 tttttctttgttcttctcatcaccctgaactttactctgatt 40676277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 35493004 - 35493052
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35493004 aattataataattctacaacgattcatcaaaacctaaacctaacaattc 35493052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 43493037 - 43493091
Alignment:
Q  411 atcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaa 465  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  43493037 atcataaaatcaataaaacctatataatcgaatctatataatcgaaatttaacaa 43493091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 554
Target Start/End: Complemental strand, 10359023 - 10358966
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  10359023 caatgcaataggattcaaaaaacttacttgattttgtgtttgaaattggcttggaatg 10358966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 3942862 - 3942901
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3942862 aattctacaacgattcatcaaaacctaaacctaacaattc 3942901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 558
Target Start/End: Complemental strand, 23719582 - 23719511
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||| | |||| |||||||| |||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  23719582 cacaaaatagcaatgcaataggactcaaaaaacttacttaattttgtgcttgaaattggcttggaatgactt 23719511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 558
Target Start/End: Complemental strand, 24107254 - 24107183
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||| | |||| |||||||| |||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  24107254 cacaaaatagcaatgcaataggactcaaaaaacttacttaattttgtgcttgaaattggcttggaatgactt 24107183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 34520202 - 34520135
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  34520202 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatg 34520135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 342 - 380
Target Start/End: Original strand, 16583266 - 16583304
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaatt 380  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16583266 aattctacaacgattcatcaaaacctaaacctaacaatt 16583304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 17537381 - 17537320
Alignment:
Q  497 caatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    |||| |||||||||||| |||||||||||| ||||||| |||||||| | ||||||||||||    
T  17537381 caatgcaataggattcacaaaacttacttgattttgtgcttgaaattagcttggaatgactt 17537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 2918092 - 2918044
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  2918092 aattctaacaattctacaacgattcatcaaaacctcaacctaacaattc 2918044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 19470349 - 19470301
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  19470349 aattctaacaattctacaacaattcatcaaaacctaaacctaacaattc 19470301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 37311199 - 37311135
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttgga 551  Q
    ||||||| | |||| |||||||||||| |||||||||||| ||||||| |||||||||| |||||    
T  37311199 cacaaaatagcaatgcaataggattcagaaaacttacttgattttgtgcttgaaattggcttgga 37311135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 43492936 - 43492984
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  43492936 aattctaacaattctacaacgattcatcaaaatctaaacctaacaattc 43492984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 377
Target Start/End: Original strand, 23409196 - 23409231
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaaca 377  Q
    ||||||||||||||||||||||||||||||||||||    
T  23409196 aattctacaacgattcatcaaaacctaaacctaaca 23409231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 23786511 - 23786472
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  23786511 aattctacaacgattcatcaaaacctaaatctaacaattc 23786472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 40676133 - 40676094
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  40676133 aattctacaacgattcatcaaaacgtaaacctaacaattc 40676094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 23409248 - 23409290
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  23409248 ctaacaattctaacctaaactatcctaacatatcataaaatca 23409290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 23786459 - 23786417
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  23786459 ctaacaattctaacctaaactatcctaacatatcataaaatca 23786417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 33404960 - 33404998
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcacctt 105  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  33404960 gctcctcctcaacctcgactgattgtacaccagcacctt 33404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 17537909 - 17537799
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||| |||||| ||||||||||  |||||       |||| ||||||||    ||||||||||| |||||  ||||||||    
T  17537909 gctcctcctcaacctcgaatgattatacaccagcaccttcaagtccttctttttgacggatccatcacatgtgattttgtgccatgtcatcggtgatttt 17537810  T
Q  167 tctttgttctt 177  Q
    ||||| |||||    
T  17537809 tctttcttctt 17537799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 5422072 - 5422124
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||||| |||||||||||||||||| ||||||| |||||||||| ||| ||||    
T  5422072 caatagaattcaaaaaacttacttgattttgtgcttgaaattggcttgaaatg 5422124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 16413274 - 16413162
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| | ||||||| || |||||       |||||||||||||  | |||  ||| || |||||| | ||||||    
T  16413274 gctcctcctcaacctcgaatgattgtacactgacaccttcgaatccttcttttttacggaaccatcacattcgattccgtgtcatgtcataggcgatttt 16413175  T
Q  167 tctttgttcttct 179  Q
    ||||| |||||||    
T  16413174 tctttcttcttct 16413162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 8268495 - 8268537
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  8268495 ctaaccattctaacctaaactatcctaacatatcataaaatca 8268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 16583327 - 16583369
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  16583327 ctaaccattctaacctaaactatcctaacatatcataaaatca 16583369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 19470288 - 19470246
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||||||| | ||||||||| ||||||    
T  19470288 ctaacaattctaacctaaactatcttaacatatcataaaatca 19470246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 22003133 - 22003175
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  22003133 ctaaccattctaacctaaactatcctaacatatcataaaatca 22003175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 37311641 - 37311593
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    ||||||| |||||||||| ||||| |||||| ||||||||||| |||||    
T  37311641 gctcctcatcaacctcgaatgattatacaccagcaccttcaaatccttc 37311593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 7e-54; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 541266 - 541032
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||         |||||||| ||||||||| |||| |||||||          
T  541266 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaata---------taatcgaacctatataatcgaaatttaacaaaaaaaa 541176  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  541175 aaaaaacaattcgaccacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaa 541076  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    || ||   ||||||||||||||| ||||||| | |||||||||||||    
T  541075 atagc---aaggagaataaaaaacgcaacaagggagttttggaaact 541032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 41799170 - 41798924
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||          
T  41799170 ctaacaattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaatatatataatcgaacctatataatcgaaatttaacaa-aaaaa 41799072  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggatt-caaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaa 570  Q
           ||||  ||| |||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| ||    
T  41799071 aacaaataattcaaccgcaaaacaacaatgcaataagattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatgtcttgaaatagctcaa 41798972  T
Q  571 aatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||||||||   |||||  |||||| | ||||||| |||||||||||||    
T  41798971 aatcgcacattggagatcaaaaaacgtaacaatggagttttggaaact 41798924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 485 - 618
Target Start/End: Original strand, 25499722 - 25499855
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaagga 584  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||  ||||    
T  25499722 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatgacttgaaattgctcaaaatcgcacctagga 25499821  T
Q  585 gaataaaaaatgcaacaatgaagttttggaaact 618  Q
    ||  |||||||| ||||||| |||||||||||||    
T  25499822 gatcaaaaaatgtaacaatggagttttggaaact 25499855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 34682502 - 34682362
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||| |||||||||    
T  34682502 caattcgaccacaaaacaacaatgcaatagaattcaaaaaacttacttgttcttgtgattgaaattaacttggaatgacttcaaattgctcaaaatcgca 34682403  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||||||||||||| | ||||||| |||||||||||||    
T  34682402 cctaggagaataaaaaacgtaacaatggagttttggaaact 34682362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 8539063 - 8539198
Alignment:
Q  65 ctgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||| ||||||||||||| ||||||    
T  8539063 ctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttt----cggaaccatcgcaaacaatttcgtgccacgtcataggtgatt 8539158  T
Q  165 tttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  8539159 tttctttgttcttctcatcaccctgaacgttaccctgatt 8539198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 6137 - 5901
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| |||||||||  ||| |||||||          
T  6137 ctaacaattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcaaaatttaacaa-aaaat 6048  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  || |||    
T  6047 aaaaaacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaatgactcaaa 5948  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||| ||||| ||||||||| |||||||||||||    
T  5947 atcgcaccttggataatcaaaaacgcaacaatggagttttggaaact 5901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 67 - 220
Target Start/End: Original strand, 18309468 - 18309622
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||        |||||||||||||||||||| |||| || |||||| | |||||    
T  18309468 gctcctcctcaacctggactgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcacaaacaattatgtgtcatgtcataggcgattt 18309567  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctaca 220  Q
    ||||||||||||||||||| ||| ||||||||| | ||||| |||||||||||||    
T  18309568 ttctttgttcttctcatcaccctgaacgttaccttaattctgagacatatctaca 18309622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 8539371 - 8539510
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||    
T  8539371 caattcgactacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattggaattggtttggaatgacttcaaatgactcaaaatcgca 8539470  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| || |||||| ||||||||| |||||||||||||    
T  8539471 cattggataa-aaaaaacgcaacaatggagttttggaaact 8539510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 3602549 - 3602688
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||       ||||||||||||||||||||| |||||| ||| || | ||||||    
T  3602549 gctcctcctcaacctggactgattgtacaccgccaccttcgaacccttctttttttcggaaccatcacaaacaatttcgtgccatgtcgtaggcgatttt 3602648  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| ||| |||||||||||||    
T  3602649 tctttgttcttctcatcaccctgaacattaccctgattct 3602688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 8575262 - 8575108
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||        |||||||||  |||||||||   |||||||||||| ||||||||    
T  8575262 gctcctcctcaacctcgagtgattgtacactggcaccttcgaaccctt-attttttcggaaccatggcaaacaattccatgccacgtcataggtgatttt 8575164  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    ||||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  8575163 tcttttttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 8575108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 25499289 - 25499428
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||       |||||||||||||||||||| | ||||| |||||| |  |||||    
T  25499289 gctcctcctccacctggactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattctatgccatgtcataagcaatttt 25499388  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  25499389 tctttgttcttctcatcaccctgaacgttaccctgattct 25499428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 372 - 554
Target Start/End: Original strand, 3602881 - 3603062
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaac-aagnnnn 470  Q
    |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||| |||||| ||||||||| |||| ||||| ||         
T  3602881 ctaacaattctaacctaaactatcctaacatataataaaatcataaaatcaataaaacttatat-atcgaacctatataatcgaaatttaacaaaaaaaa 3602979  T
Q  471 nnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
            |||| |||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  3602980 aaaaaaaaaattcgaccacaaaacaac-atgcaatatgattcaaagaacttacttgtttttgtgattgaaattggcttggaatg 3603062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 8574966 - 8574826
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    
T  8574966 caattcgaccacaaagcaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgca 8574867  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| |||  |||| ||||||||| |||||||||||||    
T  8574866 ccttggataattcaaaacgcaacaatggagttttggaaact 8574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 11347889 - 11348048
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtc---atatgtga 162  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||        |||||||||| |||||||||   |||||||||   ||| | ||    
T  11347889 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcgcaaacaattccatgccacgtcgtcataggcga 11347988  T
Q  163 tttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||||||| | | ||||||||||||||||| |||||||||||||||    
T  11347989 tttttctttgttcttctcatcaccatgaacgttaccctgattctgagacatatctacatt 11348048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 11348329 - 11348469
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||||||| |||||||  ||||||||  || |||||||||    
T  11348329 caattcgaccacaaagcaacaatgcaataggattaaaaacacttacttgtttttgtgattgaaattggcttggaatagcttcaaatgactcaaaatcgca 11348428  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  11348429 ccttggataatcaaaaacgcaacaatggagttttggaaact 11348469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 20199879 - 20200065
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagt---taacaagnn 468  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||| |||| |   ||| ||       
T  20199879 ctaacaattctaacctaaactatcataacatatcataaaatcataaaatcaataaaacctatat-atcgaacctatataatcgaaatttaataataaaaa 20199977  T
Q  469 nnnnnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgac 556  Q
              |||| || |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  20199978 aaaaacaaagaattcgatcacaaaacaacaatgcaataagattcaaaaaatttacttgtttttgtgattgaaattggcttggaatgac 20200065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 35566479 - 35566634
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn-cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||| ||||||||||||||| |||||||| ||||||||| |||| ||         |||||||||||||||||||||||||||| |||||| | |||||    
T  35566479 gctccgcctcaacctcgactggttgtacactggcaccttcgaaccttttttttctttcggaaccatcacaaacaattttgtgccatgtcataggcgattt 35566578  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    | ||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  35566579 t-ctttgttcttctcatcaccctgaacgttaccctgattatgagacatatctacatt 35566634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 6351 - 6212
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       | |||||||| |||||||||   |||||| ||||| | ||||||    
T  6351 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcagaaccatcgcaaacaattccatgccacatcataggcgatttt 6252  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| ||| |||||||||||||||||    
T  6251 tcttttttcttctcatcaccctgaacgttaccctgattct 6212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 11028536 - 11028675
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| |||       |||||||||| |||||||||   |||||||||||| | ||||||    
T  11028536 gctcctcctcaacctcgagtgattgtacactggcaccttcaaaccattctttttttcggaaccatcgcaaacaattccatgccacgtcataggagatttt 11028635  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||| | | |||||||||||||||||    
T  11028636 tcttttttcttctcatcaccatgaacgttaccctgattct 11028675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 19035796 - 19035657
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  19035796 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 19035697  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  19035696 tcttttttcgtctcatcatcgtgaacgttaccctgattct 19035657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 30710688 - 30710827
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       | |||||||  |||||||||   |||||||||||| ||||||||    
T  30710688 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcagaaccattgcaaacaattccatgccacgtcataggtgatttt 30710787  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| |||||||||||||| | |||||||||||||||||    
T  30710788 tcttttttcttctcatcatcgtgaacgttaccctgattct 30710827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 19035579 - 19035343
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  19035579 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 19035490  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  19035489 aacatacaattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 19035390  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   | | ||| ||||| ||||||||| |||||||||||||    
T  19035389 atcgcaccttgaaaaattaaaaacgcaacaatggagttttggaaact 19035343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 41202400 - 41202262
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    ||||||||||||||| | ||||||||||||||||||||| |||| ||        |||||||||||||||||||| ||||||| ||||||   |||||||    
T  41202400 ctcctcctcaacctcaagtgattgtacaccggcaccttcgaaccattttttttttcggaaccatcacaaacaattatgtgccatgtcatagccgattttt 41202301  T
Q  168 ctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||| ||| ||||||||||| |||||    
T  41202300 ctttgttcttctcatcaccctgaacgttaccctaattct 41202262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 554
Target Start/End: Original strand, 18309885 - 18309961
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18309885 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 18309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 541523 - 541440
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||    
T  541523 cggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctcatcatcctgaacgttaccctgattct 541440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 478 - 612
Target Start/End: Complemental strand, 41201973 - 41201839
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||  |||| ||| |||||||| ||||||| |    
T  41201973 caattcgaccacaaaacaacaatgcaataggatttaaaaaacttacttatttttgtgattgaaattggcttaaaatggcttgaaattgctcaaaatcgta 41201874  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttg 612  Q
    || |||||   |||||| | |||||| ||||||||    
T  41201873 cgtaggagctcaaaaaacgtaacaataaagttttg 41201839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 11028832 - 11028917
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaat 563  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  11028832 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatgacttaaaat 11028917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 27660281 - 27660045
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  27660281 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 27660192  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||| ||| | ||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||    
T  27660191 aacatacaattcgactacagagcaataatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaa 27660092  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||| ||||| ||||||||| |||||||||||||    
T  27660091 atcgcaccttggataattaaaaacgcaacaatggagttttggaaact 27660045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 34682928 - 34682779
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnnc----------ggaaccatcacaaacaattttgtgccacgtcat 156  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||       |          ||||||||||||||||||| ||||||| |||||    
T  34682928 gctcctcctcaacctcgactgattgtacaccgtcaccttcgaacccttctttttttctttctttctcggaaccatcacaaacaattatgtgccatgtcat 34682829  T
Q  157 atgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    | | |||||||||||||||||||||||| ||| |||||||||||||||||    
T  34682828 aggcgatttttctttgttcttctcatcaccctgaacgttaccctgattct 34682779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 38855539 - 38855624
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaat 563  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  38855539 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaat 38855624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 27660498 - 27660358
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| |||||||||   |||||||||||| ||||||||    
T  27660498 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccacgtcataggtgatttt 27660399  T
Q  167 tc-tttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    || ||| || |||||||||  || |||||||||||||||||    
T  27660398 tcttttttttttctcatcactctgaacgttaccctgattct 27660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 578
Target Start/End: Original strand, 30710988 - 30711088
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| ||||||||  || |||||||||    
T  30710988 caattcgaccacaaagcaacaatacaatagaattcaaaaaacttacttgtttttgttattaaaattggcttgtaatggcttcaaatgactcaaaatcgca 30711087  T
Q  578 c 578  Q
    |    
T  30711088 c 30711088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 1399302 - 1399147
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||       ||||| |||||||||||||| ||||||| |||||| |  |||||    
T  1399302 gctcctcctcaacctagactaattgtacaccggcacctttgaacccttctttttttcggaatcatcacaaacaattctgtgccatgtcata-gcaatttt 1399204  T
Q  167 tctttgttcttctcatcatcctaaacgtt-accctgattctaagacatatctacatt 222  Q
    |||| ||||||||||||| ||| |||||| |   ||||||| |||||||||||||||    
T  1399203 tcttcgttcttctcatcaccctgaacgttgattatgattctgagacatatctacatt 1399147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 35927081 - 35926939
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnnc---ggaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||            ||||||||||||||||||||||||||| ||| || | ||     
T  35927081 gctcctcctcaacctcgactgattgtacatcggcaccttcgaacccttttttttttttttggaaccatcacaaacaattttgtgccatgtcgtaggcgaa 35926982  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||| ||||| |||||| |||||||||||||||| ||||    
T  35926981 ttttctttcttcttgtcatcaccctaaacgttaccctggttct 35926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 615
Target Start/End: Complemental strand, 35926592 - 35926466
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    ||||||| |||| ||||||||||||||||||||| || | ||||||||||||||    |||||||| ||| |||||||| ||||||||||  |||||||     
T  35926592 caaaacagcaatgcaataggattcaaaaaacttatttttctttgtgattgaaatgttcttggaatggcttgaaattgctcaaaatcgcacctaggagaac 35926493  T
Q  589 aaaaaatgcaacaatgaagttttggaa 615  Q
    |||||| | ||||||| ||||||||||    
T  35926492 aaaaaacgtaacaatggagttttggaa 35926466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 38855243 - 38855404
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||| |||        ||||||||  |||||||||   |||||||||||| | ||||||    
T  38855243 gctcctcctcaacctcgagtgattgtacactggcaccttcgaaccattcttttttttggaaccattgcaaacaattccatgccacgtcataggagatttt 38855342  T
Q  167 tctttgttcttctcatcatcctaaacgttaccc------tgattctaagacatatctacatt 222  Q
    ||||| |||||||||||| | | ||||||||||      |||||||||||||||||||||||    
T  38855343 tcttttttcttctcatcaccatgaacgttaccctgattatgattctaagacatatctacatt 38855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 20199611 - 20199694
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||| ||||||||||||||| |||||  | |||||||||||||||||||||||| ||| |||||| ||||||||||    
T  20199611 cggaaccatcactaacaattttgtgccatgtcatgggcgatttttctttgttcttctcatcaccctgaacgttgccctgattct 20199694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 558
Target Start/End: Complemental strand, 6791958 - 6791887
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||    
T  6791958 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatgactt 6791887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 523
Target Start/End: Original strand, 35566812 - 35566955
Alignment:
Q  378 attctaacctaaactatcctcacatatcattaaatcata----aaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnn 473  Q
    |||||||| ||||||||||| ||||||||| ||||||||    |||| |||||||| ||||||||||||  ||||||||  ||| |||||||            
T  35566812 attctaacttaaactatcctaacatatcataaaatcatatataaaataaataaaacctatataatcgaacttatataatcaaaatttaacaa------aa 35566905  T
Q  474 nnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttac 523  Q
        ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  35566906 aaaacaattcgaccacaaaacaacaatacaacaggattcaaaaaacttac 35566955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 1398944 - 1398890
Alignment:
Q  411 atcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaa 465  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  1398944 atcataaaatcaataaaacctatataatcgaacctatataattgaaatttaacaa 1398890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 3602820 - 3602868
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  3602820 aattgtaacaattctacaacgattcatcaaaacctaaacctaacaattc 3602868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 11348163 - 11348211
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  11348163 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 11348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 34682645 - 34682597
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  34682645 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 34682597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 555
Target Start/End: Complemental strand, 36348866 - 36348798
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatga 555  Q
    ||||||| | |||| |||||| |||||||||||||||||| ||||||| |||||||||| |||||||||    
T  36348866 cacaaaatagcaatgcaatagaattcaaaaaacttacttgattttgtgcttgaaattggcttggaatga 36348798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 551
Target Start/End: Original strand, 40937159 - 40937223
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttgga 551  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  40937159 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttgga 40937223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 541318 - 541279
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  541318 aattctacaacgattcatcaaaacctaaacctaacaattc 541279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 41202121 - 41202082
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41202121 aattctacaacgattcatcaaaacctaaacctaacaattc 41202082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 1399035 - 1398987
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  1399035 aattctaacaattctacaactattcatcaaaacctaaacctaacaattc 1398987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 8575063 - 8575011
Alignment:
Q  371 cctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaa 423  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||  |||||||    
T  8575063 cctaacaattctaacctaaactatcctaacatatcataaaatcaacaaatcaa 8575011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 30887096 - 30887144
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  30887096 aattctaacaattctacaacgattcatcaaaacctaaatctaacaattc 30887144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 41088355 - 41088303
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  41088355 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 41088303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 1696461 - 1696528
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||||||||||||||||||| ||| ||||||| |||||||||  ||||||||    
T  1696461 cacaaaatagcaatgcaataggattcaaaaaacttaattgattttgtgcttgaaattgacttggaatg 1696528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 41202054 - 41202011
Alignment:
Q  378 attctaacctaaactatcctcacatatcattaaatcataaaatc 421  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  41202054 attctaacctaaactatcctaacatatcataaaatcataaaatc 41202011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 34682584 - 34682542
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  34682584 ctaacaattctaacctaaactatcctaacatatcataaaatca 34682542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 380
Target Start/End: Original strand, 35566745 - 35566783
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaatt 380  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35566745 aattctacaacgatttatcaaaacctaaacctaacaatt 35566783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 30710906 - 30710959
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  30710906 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 30710959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 30886918 - 30886963
Alignment:
Q  161 gatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||    
T  30886918 gatttttctttgttcttctcatcaccctgaacgttactctgattct 30886963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 30887166 - 30887219
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  30887166 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata 30887219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 35926805 - 35926760
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaa 378  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||    
T  35926805 aattctaacaattctacaacaattcatcaaaacctaaacctaacaa 35926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 41799220 - 41799183
Alignment:
Q  344 ttctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  41799220 ttctacaacgattcatcaaaatctaaacctaacaattc 41799183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 7483979 - 7483927
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| ||| ||||    
T  7483979 caataggattaaaaaaacttacttgattttgtgcttgaaattggcttgaaatg 7483927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 1973095 - 1973162
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| | ||||||||||||||| ||||||| ||||||| |||||||| | ||||||||    
T  1973095 cacaaaatagcaatgccataggattcaaaaaatttacttgattttgtgcttgaaattagcttggaatg 1973162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 414
Target Start/End: Original strand, 11028743 - 11028786
Alignment:
Q  371 cctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||    
T  11028743 cctaacaattctaacctaaactatcctaaaatatcataaaatca 11028786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 20199548 - 20199587
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttc 106  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  20199548 gctcctcctcaacctggactgattgtacaccgacaccttc 20199587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 23190679 - 23190746
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||||||||||||| |||||||||   || |||||||||  ||||||| |||||||||| ||||||||    
T  23190679 cacaaaacaacaatgcaataggatgataacaacttacttaattttgtgcttgaaattggcttggaatg 23190746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 25499560 - 25499599
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  25499560 aattctacaacgattcatcaaaatctaaatctaacaattc 25499599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 18309804 - 18309845
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||| |||||||||||||||||||| ||||||||| ||||||    
T  18309804 taaccattctaacctaaactatcctaacatatcataaaatca 18309845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 618
Target Start/End: Original strand, 30887256 - 30887345
Alignment:
Q  530 ttgtgattgaaa-ttggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||||| |||| |||||||| ||| |||| ||| ||||||||||   |||||  |||||| | ||||||| |||||||||||||    
T  30887256 ttgtgattgaaaattggcttggaatggcttgaaatagctcaaaatcgcacattggagatcaaaaaacgtaacaatggagttttggaaact 30887345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 618
Target Start/End: Original strand, 35566958 - 35566995
Alignment:
Q  581 aggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  35566958 aggagaataaaaaacgcaacaatggagttttggaaact 35566995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 38855452 - 38855493
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||||||||||||||||||||||| | ||||||| ||||||    
T  38855452 taacaattctaacctaaactatcctaaaatatcataaaatca 38855493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 6792447 - 6792399
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  6792447 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 6792399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 28113028 - 28112888
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  28113028 caattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaattgctcaaaatcgca 28112929  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||||||||||||||| ||||||  |||||||||||||    
T  28112928 cctaggagaataaaaaatgtaacaatagagttttggaaact 28112888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 545
Target Start/End: Complemental strand, 46860850 - 46860679
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||          
T  46860850 ctaaccattctaacctaaactatcctaacatatcat-aaatcataaaatcaataaaacatatataatcgaacctatataatcgaaatttaacaa-aaaaa 46860753  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattgg 545  Q
          ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46860752 aaaaaacaattcgaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattgg 46860679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 10524059 - 10524299
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| ||||||||||||| |||||| ||||||||| ||||||  |||||||||     |||||||||||| ||||||||| |||| |||||||          
T  10524059 ctaaccattctaacctaaaatatcctaacatatcataaaatcaacaaatcaata-----tatataatcgaacctatataatcgaaatttaacaaaaaata 10524153  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
           |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||    
T  10524154 tcatat-aatttgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaa 10524252  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||||||||| |||||| |  |||||||||||||    
T  10524253 atcgcaccttggataataaaaaacgcaacattagagttttggaaact 10524299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 34142486 - 34142626
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  34142486 caattcgaccactcaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctttaaattgctcaaaatcgca 34142585  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
      ||||||||||||||| ||||||||| |||||||||||||    
T  34142586 gcaaggagaataaaaaacgcaacaatggagttttggaaact 34142626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 46597129 - 46596991
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||| |||| |||||||||||| |||||| ||    
T  46597129 caatttgaccacaaaacaacaatgcaataggatt-aaaaaacttagttgtttttgtgattgaaattggcttg-aatggcttcaaattgctcaaaatctca 46597032  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    | ||||||||||||||| ||||||||| |||||||||||||    
T  46597031 ccaaggagaataaaaaacgcaacaatggagttttggaaact 46596991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 36392371 - 36392230
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  36392371 caattcgaccacaaaacaacaatgcaataggattctaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgca 36392272  T
Q  578 cgaaggagaataaaaaat-gcaacaatgaagttttggaaact 618  Q
    |  ||||||  ||||||| | ||||||| |||||||||||||    
T  36392271 cctaggagatcaaaaaatcgtaacaatggagttttggaaact 36392230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 45257858 - 45257998
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  || |||||||||    
T  45257858 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgaaatgacttcaaatgactcaaaatcgca 45257957  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| |||||||||||||||||||||||    
T  45257958 ccttggataatcaaaaacgcaacaatgaagttttggaaact 45257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 28978233 - 28978094
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||       ||||||||||||||||||||  ||||||||||||||| ||||||    
T  28978233 gctcctcctcaacctcgagtgattgtacaccgggaccttcgaacccttctttttttcggaaccatcacaaacaattccgtgccacgtcatatgcgatttt 28978134  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| ||| |||||||||||||    
T  28978133 tctttgttcttctcatcaccctgaacattaccctgattct 28978094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 34142060 - 34142199
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||       |||||||||| |||||||||| ||||||||||||| | ||||||    
T  34142060 gctcctcctcaacctcgagtgattgtactccggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttt 34142159  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  34142160 tctttgttcttctcatcaccctgaacgttaccctgattct 34142199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 41623290 - 41623429
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||       ||||||||||||||||||||| |||||| |||||| | ||||||    
T  41623290 gctcctcctcaacctcgactgattgtacaccgacaccttcgaaccattctttttttcggaaccatcacaaacaatttcgtgccatgtcataggcgatttt 41623389  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  41623390 tctttgttcttctcatcatcctgaatgttaccctgattct 41623429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 614
Target Start/End: Original strand, 17840622 - 17840854
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  17840622 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 17840711  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||    
T  17840712 aacaaacaattcgaccacaaagcaagaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggattggaatgacttcaaatgacctaaa 17840811  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttgga 614  Q
    |||||||   ||| ||| ||||| |||||||||||||||||||    
T  17840812 atcgcaccttggataatcaaaaacgcaacaatgaagttttgga 17840854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 48194459 - 48194599
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||  |||||||||||| |||||||||    
T  48194459 caattcgaccacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattcgcttggaatagcttcaaattgctcaaaatcgca 48194558  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
      ||||| ||| ||||| ||||||||  |||||||||||||    
T  48194559 gcaaggaaaatcaaaaacgcaacaatagagttttggaaact 48194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 17840408 - 17840547
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||||       |||||||||| |||||||||  ||||||||||||| | ||||||    
T  17840408 gctcctcctcaacctcgagtgattgtacaccggcacattcgaacccttctttttttcggaaccatcgcaaacaattcagtgccacgtcataggcgatttt 17840507  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  17840508 tctttgttcttctcatcaccctgaacgttaccctgattct 17840547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 40589946 - 40590085
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||||||       |||||||||| ||||||||| ||||||||||| || | ||||||    
T  40589946 gctcctcctcaacctcgagtgattgtacaccggcatcttcgaacccttctttttttcggaaccatcgcaaacaattctgtgccacgtcgtaggcgatttt 40590045  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||| ||||||||||    
T  40590046 tctttgttcttctcatcaccctgaacgtttccctgattct 40590085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 34157890 - 34158027
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttc 168  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||         |||||||||| ||||||||||||||||||| |||| | ||||||||    
T  34157890 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcgcaaacaattttgtgccacggcataggcgatttttc 34157989  T
Q  169 tttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  34157990 tttgttcttctcatcaccctgaacgttaccctgattct 34158027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 15309803 - 15309943
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||  || ||||| |||    
T  15309803 caattcgaccacaaaacaacaatgcaataagattaaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaatgactcaaaattgca 15309902  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |  |||||||  |||||   ||||||| |||||||||||||    
T  15309903 cctaggagaaccaaaaacaaaacaatggagttttggaaact 15309943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 485 - 616
Target Start/End: Complemental strand, 33603439 - 33603308
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaagga 584  Q
    ||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||| |||| ||| ||||||||||  ||||    
T  33603439 accacaaaacagcaatgcaataggattctaaaaatttacttgtttttgtgattgaaattgacttggaatgacttgaaatggctgaaaatcgcacctagga 33603340  T
Q  585 gaataaaaaatgcaacaatgaagttttggaaa 616  Q
    |||  ||||| | ||||||| |||||||||||    
T  33603339 gaaccaaaaaggtaacaatggagttttggaaa 33603308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 36392757 - 36392658
Alignment:
Q  123 cggaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||||||||||||||||||| |||| || |||||| | |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  36392757 cggaaccatcacaaacaattatgtgtcatgtcataggcgatttttctttgttcttctcatcaccctgaacgttaccctgattctgagacatatctacatt 36392658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 42683612 - 42683754
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggc---accttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    |||||||||||||||||| |||||||||||||||   |||||| ||||||||       ||||||||||||||||||||  |||||| | |||| | |||    
T  42683612 gctcctcctcaacctcgagtgattgtacaccggcggcaccttcgaacccttctttttttcggaaccatcacaaacaattcagtgccatgccataggcgat 42683711  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  42683712 ttttctttgttcttctcatcaacctgaacgttaccctgattct 42683754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 9366237 - 9366098
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  9366237 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 9366138  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  9366137 tcttttttcgtctcatcatcgtgaacgttaccctgattct 9366098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 20565848 - 20565987
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||| |||||||||   ||||| |||||| |||| |||    
T  20565848 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccatgtcataggtgacttt 20565947  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||| ||| |||||||||| | |||||||||||||||||    
T  20565948 tcttttttcgtctcatcatcgtgaacgttaccctgattct 20565987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 45362293 - 45362154
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       | | |||||| |||||||||| ||| ||||||||| | ||||||    
T  45362293 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttctgtaccatcgcaaacaatttcgtgtcacgtcataggcgatttt 45362194  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||| ||||||||  ||| |||||||||||||||||    
T  45362193 tctttgtttttctcatctccctgaacgttaccctgattct 45362154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 28113406 - 28113266
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaaccc---ttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||        |||||||||||||||||||| |||| || ||||||   |||    
T  28113406 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttatttttttttccggaaccatcacaaacaattatgtgtcatgtcatagacgat 28113307  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    ||||||||||||||||||||| ||  |||||||||||||||    
T  28113306 ttttctttgttcttctcatcacccagaacgttaccctgatt 28113266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 485 - 578
Target Start/End: Complemental strand, 28977796 - 28977703
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcac 578  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||| ||||||||||    
T  28977796 accacaaaacaacaatgcaataggattaaaaaaacttacttgtttatgtgattgaaattggattggaatgacttgaaatagctcaaaatcgcac 28977703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 489 - 618
Target Start/End: Complemental strand, 45361858 - 45361729
Alignment:
Q  489 caaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaat 588  Q
    |||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||| ||||| ||| |||| ||| ||||||||||   |||||      
T  45361858 caaaacaacaatgcaatagaattaaaaaaacttacttgtttttatgattgaaattggtttagaatggcttgaaatagctcaaaatcgcaccttggagatc 45361759  T
Q  589 aaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||| ||||||| |||||||||||||    
T  45361758 aaaaaatgtaacaatggagttttggaaact 45361729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 48314984 - 48314832
Alignment:
Q  400 catatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnnnnnnnncaatttgaccacaaaacaacaa 499  Q
    |||||||| ||||||||||||||||||||| |||||| ||||| ||||||||| |||| |||||||            ||||| ||||||||||||||||    
T  48314984 catatcataaaatcataaaatcaataaaacttatata-tcgaacctatataatcgaaatttaacaa-aaaaaaacaaacaattcgaccacaaaacaacaa 48314887  T
Q  500 tacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    | ||||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  48314886 tgcaatatgattcaaaaaacttacttgtttttgtgattgaaatttgcttggaatg 48314832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 20566161 - 20566301
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||||||||    
T  20566161 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgca 20566260  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   | | ||| ||||| ||||||||| |||||||||||||    
T  20566261 ccttgaaaaattaaaaacgcaacaatggagttttggaaact 20566301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 42504375 - 42504238
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| |||||||||   |||||||||||| | ||||||    
T  42504375 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccatgccacgtcataggagatttt 42504276  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    ||||| |||||||||||| ||| |||||||| ||||||    
T  42504275 tcttttttcttctcatcaccctgaacgttactctgatt 42504238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 48271860 - 48271997
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||       ||||||||||||||||||||| ||| || |||||| |  |||||    
T  48271860 gctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttacggaaccatcacaaacaatttcgtgtcatgtcataggcaatttt 48271959  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgatt 204  Q
    ||||||||||||| || | | | |||||||||||||||    
T  48271960 tctttgttcttcttattaccatgaacgttaccctgatt 48271997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 554
Target Start/End: Original strand, 48272283 - 48272359
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48272283 caattcgaccacaaaacaacaatgtaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 48272359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 10225279 - 10225421
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncg---gaaccatcacaaacaattttgtgccacgtcatatgtgat 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||             ||||||||||||||||||  ||||||  ||||| | |||    
T  10225279 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacctttttttttttttttagaaccatcacaaacaattccgtgccatatcataggcgat 10225378  T
Q  164 ttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  10225379 ttttctttgttcttctcatcaccctgaacgttaccctgattct 10225421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 1641682 - 1641565
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||       |||||||||||||  ||||| ||||||| |||||| | ||||||    
T  1641682 gctcctcctcaacctcgtttgattgtacaccggcaccttcaaatccttcttttttacggaaccatcacattcaattatgtgccatgtcataggcgatttt 1641583  T
Q  167 tctttgttcttctcatca 184  Q
    ||||| ||||||||||||    
T  1641582 tctttcttcttctcatca 1641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 494 - 618
Target Start/End: Complemental strand, 15070584 - 15070460
Alignment:
Q  494 caacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaa 593  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||||||||    ||| | | ||||    
T  15070584 caacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttgtaatgtcttcaaatgactcaaaatcgcaacttggatactcaaaa 15070485  T
Q  594 atgcaacaatgaagttttggaaact 618  Q
    | ||||||||| |||||||||||||    
T  15070484 acgcaacaatggagttttggaaact 15070460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 522 - 618
Target Start/End: Original strand, 34139600 - 34139696
Alignment:
Q  522 acttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||||||||||||||||||| |||||||||||||||||  || ||||||||||   ||| ||||||||| ||||||||| |||||||||||||    
T  34139600 acttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttggataataaaaaacgcaacaatggagttttggaaact 34139696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 486 - 554
Target Start/End: Original strand, 42684043 - 42684111
Alignment:
Q  486 ccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  42684043 ccacaaaacaacaatgcaataggattaaaaaaacttacttatttttgtgattgaaattggtttggaatg 42684111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 46861194 - 46861054
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cggaaccatcacaaacaattttgtgccacgtcatatgtgattt 165  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||         ||||||||||||||||||||   || ||  ||||| | |||||    
T  46861194 ctcctcctcaatctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaattccatgtcatatcataagcgattt 46861095  T
Q  166 ttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  46861094 ttctttgttcttctcatcaccctgaacgttaccctgattct 46861054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 492 - 618
Target Start/End: Original strand, 40590391 - 40590517
Alignment:
Q  492 aacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcacgaaggagaataaa 591  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||| |||| ||| ||||||||||   |||||  |||    
T  40590391 aacaacaatgcaataggattaaaaaaacttacttgtttttgcgattgaaattggcttggaatggcttgaaatagctcaaaatcgcaccttggagatcaaa 40590490  T
Q  592 aaatgcaacaatgaagttttggaaact 618  Q
    ||| | | ||||| | |||||||||||    
T  40590491 aaacgtagcaatggaattttggaaact 40590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 478 - 544
Target Start/End: Original strand, 41623712 - 41623778
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattg 544  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41623712 caattcgaccgcaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattg 41623778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 21186229 - 21186148
Alignment:
Q  125 gaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| |||| || ||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||    
T  21186229 gaaccatcacaaacaattctgtgtcatgtcatatgcaatttttctttgttcttctcatcaccctgaacgttaccctgattct 21186148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 21185870 - 21185794
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  21185870 caattcgaccacaaaataacaatgcaataggattcaaaaaacttatttgtttttgtgattgaaattggcttgaaatg 21185794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 42504062 - 42503922
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| || |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||  ||  |||| ||||||||  || |||||||||    
T  42504062 caattcgatcacaaagcaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattgacttctaatgtcttcaaatgactcaaaatcgca 42503963  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
        ||| | | ||||| ||||||||| |||||||||||||    
T  42503962 acttggatactcaaaaacgcaacaatggagttttggaaact 42503922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 36392461 - 36392394
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatc 439  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  36392461 ctaaccattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaacctatataatc 36392394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 9366020 - 9365784
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| ||||||||| |||| |||||||          
T  9366020 ctaaccattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataatcgaaatttaacaa-aaaat 9365931  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| |||| ||   |||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||    
T  9365930 aacatacaattcgaccacaaagcaactattgcataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaa 9365831  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||     | ||| ||||| ||||||||| |||||||||||||    
T  9365830 atcgcaccttcaaaaattaaaaacgcaacaatggagttttggaaact 9365784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 48194174 - 48194291
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||       |  ||||||| |||||||||| ||| || |||||| | ||||||    
T  48194174 gctcctcctcaacctcgagtgattgtacaccagcaccttcgaacccttctttttttccaaaccatcgcaaacaatttcgtgtcatgtcataggcgatttt 48194273  T
Q  167 tctttgttcttctcatca 184  Q
    | ||||||||||||||||    
T  48194274 tatttgttcttctcatca 48194291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 28113119 - 28113050
Alignment:
Q  373 taacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    |||||||||||||||||| |||||| |||||| || |||||||||||||| |||||| ||||||||||||    
T  28113119 taacaattctaacctaaaatatcctaacatataataaaatcataaaatcagtaaaacctatataatcgaa 28113050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 485 - 544
Target Start/End: Original strand, 10225699 - 10225758
Alignment:
Q  485 accacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattg 544  Q
    |||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||    
T  10225699 accacaaaacaacaattcagtaggattaaaaaaacttacttatttttgtgattgaaattg 10225758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 10225538 - 10225586
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  10225538 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 10225586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 20876548 - 20876484
Alignment:
Q  490 aaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||| ||| |||||| ||||||||    
T  20876548 aaaataacaatgcaataggattcaaaaaacttacttgattttgtgcttggaattggcttggaatg 20876484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 22292588 - 22292640
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  22292588 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 22292640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 28977961 - 28977913
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  28977961 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 28977913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 48194305 - 48194353
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  48194305 aattctaacaattctacaacgattcatcaaaacctaaacctaacaattc 48194353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 1641112 - 1641045
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||| | |||| ||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  1641112 cacaaaaaaccaatgcaatatgattcaaaacacttacttgattttgtgattgaaattggcttggaatg 1641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 21186015 - 21185976
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21186015 aattctacaacgattcatcaaaacctaaacctaacaattc 21185976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 40590218 - 40590257
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40590218 aattctacaacgattcatcaaaacctaaacctaacaattc 40590257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Original strand, 42683887 - 42683926
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42683887 aattctacaacgattcatcaaaacctaaacctaacaattc 42683926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 34142333 - 34142381
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  34142333 aattctaacaattctacaacgattcatcaaaacataaacctaacaattc 34142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 43349861 - 43349809
Alignment:
Q  502 caataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  43349861 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttcgaatg 43349809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 46860920 - 46860872
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  46860920 aattttaacaattctacaacgattcatcaaaacctaaatctaacaattc 46860872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 558
Target Start/End: Original strand, 4231093 - 4231164
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgactt 558  Q
    ||||||||| |||| |||||||||   || |||||||||| ||||||| |||||||||| ||||||||||||    
T  4231093 cacaaaacagcaatgcaataggatgataacaacttacttgattttgtgcttgaaattggcttggaatgactt 4231164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 28113172 - 28113133
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  28113172 aattctaccacgattcatcaaaacctaaacctaacaattc 28113133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 36392522 - 36392483
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  36392522 aattctacaacgattcatcaaaacataaacctaacaattc 36392483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 495 - 554
Target Start/End: Original strand, 42736713 - 42736772
Alignment:
Q  495 aacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||||| ||||| |||| |||||||||||||| ||||||| |||||||||| ||||||||    
T  42736713 aacaatgcaataagattaaaaaaacttacttgattttgtgcttgaaattggcttggaatg 42736772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 45362029 - 45361990
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  45362029 aattctacaatgattcatcaaaacctaaacctaacaattc 45361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 28977899 - 28977846
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    |||||||||||||||||||||||||| | ||||||| ||||||  |||||||||    
T  28977899 ctaacaattctaacctaaactatcctaatatatcataaaatcaacaaatcaata 28977846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 48272194 - 48272266
Alignment:
Q  392 tatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaa 465  Q
    |||||| ||||||||| ||||||||||| ||||||||| ||||| ||| || ||||||||| |||| |||||||    
T  48272194 tatcctaacatatcataaaatcataaaaccaataaaacttatat-atcaaacctatataatcgaaatttaacaa 48272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 17184926 - 17184973
Alignment:
Q  507 ggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    |||||| ||||||||| ||| |||||||||||||||||| ||||||||    
T  17184926 ggattcgaaaaacttaattgattttgtgattgaaattggcttggaatg 17184973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 21186294 - 21186247
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaaccctt 114  Q
    ||||||||||||||| || |||||||| |||||||||||| |||||||    
T  21186294 gctcctcctcaacctggattgattgtataccggcaccttcgaaccctt 21186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 618
Target Start/End: Original strand, 10225753 - 10225811
Alignment:
Q  560 aaattgcttaaaatcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||| ||||| ||||  |||||||| ||||| ||||||||| |||||||||||||    
T  10225753 aaattgctcaaaattgcacctaggagaatcaaaaacgcaacaatggagttttggaaact 10225811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 15900405 - 15900367
Alignment:
Q  68 ctcctcctcaacctcgactgattgtacaccggcaccttc 106  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  15900405 ctcctcctcagcctcgactgattgtacaccagcaccttc 15900367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 21185954 - 21185912
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  21185954 ctaaccattctaacctaaactatcctaacatatcataaaatca 21185912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 34142394 - 34142436
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||    
T  34142394 ctaacaattctaacctaaattatcctaacatatcataaaatca 34142436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 380
Target Start/End: Original strand, 41623563 - 41623601
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaatt 380  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  41623563 aattctacaacgattcatcaaaccctaaacctgacaatt 41623601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 42683948 - 42683990
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  42683948 ctaaccattctaacctaaactatcctaacatatcataaaatca 42683990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 48194366 - 48194408
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||    
T  48194366 ctaacaattctaacctaaacaatcctaacatatcataaaatca 48194408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 36392821 - 36392776
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaaccc 112  Q
    ||||||||||||||| |||||||||||||  ||||||||| |||||    
T  36392821 gctcctcctcaacctggactgattgtacaatggcaccttcgaaccc 36392776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 41623624 - 41623686
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaa 442  Q
    ||||| |||||||||||||||||||| ||||        ||||||||||||||||||| ||||||||||||    
T  41623624 ctaactattctaacctaaactatcctaacat--------atcataaaatcaataaaacctatataatcgaa 41623686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 42504158 - 42504105
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaata 425  Q
    ||||| |||||||||||||||||||| | ||||||| ||||||  |||||||||    
T  42504158 ctaaccattctaacctaaactatcctaaaatatcataaaatcaacaaatcaata 42504105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 17184408 - 17184456
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| |||||||| || |||||    
T  17184408 gctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 17184456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 42736199 - 42736247
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 115  Q
    |||||||||||||||||| ||||| |||||| ||| ||||||| |||||    
T  42736199 gctcctcctcaacctcgaatgattatacaccagcatcttcaaatccttc 42736247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 89; Significance: 1e-42; HSPs: 5)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 3411 - 3551
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  3411 caattcgaccactcaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctttaaattgctcaaaatcgca 3510  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
      ||||||||||||||| ||||||||| |||||||||||||    
T  3511 gcaaggagaataaaaaacgcaacaatggagttttggaaact 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 2985 - 3124
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||       |||||||||| |||||||||| ||||||||||||| | ||||||    
T  2985 gctcctcctcaacctcgagtgattgtactccggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttt 3084  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  3085 tctttgttcttctcatcaccctgaacgttaccctgattct 3124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 618
Target Start/End: Original strand, 389 - 621
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    |||||||||||||||||||||||||| ||||||||| ||||||  |||||||||         |||||||| |||||||||||||| |||||||          
T  389 ctaacaattctaacctaaactatcctaacatatcataaaatcaacaaatcaata---------taatcgaacctatataattgaaatttaacaa-aaaat 478  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaa 571  Q
          ||||| ||||||||| ||||||| ||||| ||||||||||||||    |||||||||||||||||||| |||||||||||||||||  || |||    
T  479 aacaaacaattcgaccacaaagcaacaatgcaataagattcaaaaaactt----gtttttgtgattgaaattggcttggaatgacttcaaatgactcaaa 574  T
Q  572 atcgcacgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |||||||   ||| ||||||||| ||||||||| |||||||||||||    
T  575 atcgcaccttggataataaaaaacgcaacaatggagttttggaaact 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 3258 - 3306
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  3258 aattctaacaattctacaacgattcatcaaaacataaacctaacaattc 3306  T

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Target: scaffold0176; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 3319 - 3361
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatca 414  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||    
T  3319 ctaacaattctaacctaaattatcctaacatatcataaaatca 3361  T

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Target: scaffold0192 (Bit Score: 86; Significance: 9e-41; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 554
Target Start/End: Complemental strand, 16741 - 16561
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| |||| |||||||          
T  16741 ctaaccattctaacctaaactatcctaacatatcataaaatcataaaatcaataaaac-tatataatcgaacctatataatcgaaatttaacaa-aaaga 16644  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
          ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  16643 aacaaacaattcgaccacaaaacaacaatgcaataggattcaaaaaatttacttgtttttgtgcttgaaattgacttggaatg 16561  T

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Target: scaffold0192; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 16811 - 16764
Alignment:
Q  333 aattataagaattctacaacgattcatcaaaacctaaacctaacaatt 380  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  16811 aattctaacaattctacaacgattcatcaaaacctaaacctaacaatt 16764  T

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Target: scaffold0192; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 17025 - 16945
Alignment:
Q  125 gaaccatcacaaacaattttgtgccacgtcatatgtgatttttctttgttcttctcatcatcctaaacgttaccctgattct 206  Q
    |||||||||| |||||||| |||||| ||||||   |||||||||||||||||||||||| |||  || |||||||||||||    
T  17025 gaaccatcactaacaatttcgtgccatgtcatagacgatttttctttgttcttctcatcaccct-gacattaccctgattct 16945  T

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Target: scaffold0199 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 479 - 618
Target Start/End: Complemental strand, 10922 - 10783
Alignment:
Q  479 aatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgcac 578  Q
    |||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||  || ||||||||||    
T  10922 aattcgaccacaaagcaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattggcttaaaatgaattcaaatgactcaaaatcgcac 10823  T
Q  579 gaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
       ||| ||||||||| |||||||||||||||||||||||    
T  10822 cttggataataaaaaacgcaacaatgaagttttggaaact 10783  T

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Target: scaffold0094 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 32 - 172
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||  ||| |||| ||||||||  || |||||||||    
T  32 caattcgaccacaaagcaataatacaataggattcaaaaaacttacttgtttttgtgattaaaattgacttgtaatggcttcaaatgactcaaaatcgca 131  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   ||| ||| ||||| ||||||||| |||||||||||||    
T  132 ccttggataattaaaaacgcaacaatggagttttggaaact 172  T

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Target: scaffold0014 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 84825 - 84685
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||  || |||||||||    
T  84825 caattcgaccacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgca 84726  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
    |   | | ||| ||||||||||||||| |||||||||||||    
T  84725 ccttgaaaaattaaaaatgcaacaatggagttttggaaact 84685  T

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Target: scaffold0494 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 618
Target Start/End: Complemental strand, 5576 - 5436
Alignment:
Q  478 caatttgaccacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgcttaaaatcgca 577  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||| ||| |||| ||||||||  || ||||| |||    
T  5576 caatttgaccacaaagcaacaatgcaataggattaaaaaaacttacttgtttttatgattgaaattggcttgtaatggcttcaaatgactcaaaattgca 5477  T
Q  578 cgaaggagaataaaaaatgcaacaatgaagttttggaaact 618  Q
        ||| | ||||||| ||||||||| |||||||||||||    
T  5476 acttggatactaaaaaacgcaacaatggagttttggaaact 5436  T

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Target: scaffold0494; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 5842 - 5701
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||       |||||||||| |||| ||||   ||||||||| || | ||||||    
T  5842 gctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatcgcaaaaaattccatgccacgtcttaggagatttt 5743  T
Q  167 tctttgttcttctcatcatcctaaacgttaccctgattctaa 208  Q
    ||||| |||||||||||| ||| |||||||||||||||||||    
T  5742 tcttttttcttctcatcaccctgaacgttaccctgattctaa 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 1545 - 1662
Alignment:
Q  67 gctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnncggaaccatcacaaacaattttgtgccacgtcatatgtgatttt 166  Q
    |||||||||||||||||| ||||| |||||||||||||||||| |||||       | ||||||||||||||||||| |||||| |||||| | ||||||    
T  1545 gctcctcctcaacctcgattgattatacaccggcaccttcaaatccttctattttacagaaccatcacaaacaatttcgtgccatgtcataggcgatttt 1644  T
Q  167 tctttgttcttctcatca 184  Q
    ||||| || |||||||||    
T  1645 tctttcttgttctcatca 1662  T

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Target: scaffold0859; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 2004 - 2071
Alignment:
Q  487 cacaaaacaacaatacaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 554  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||  ||||||||    
T  2004 cacaaaacatcaatacaatagaattcacaaaacttacttgtttttgtgcttgaaattgacttggaatg 2071  T

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Target: scaffold0618 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 554
Target Start/End: Complemental strand, 4228 - 4044
Alignment:
Q  372 ctaacaattctaacctaaactatcctcacatatcattaaatcataaaatcaataaaacatatataatcgaatctatataattgaaagttaacaagnnnnn 471  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||| ||||||  |||||||| |||| |||| ||          
T  4228 ctaacaattctaacctaaactattctaacatatcataaaatcataaaatcaataaaacctatat-atcgaacttatataatcgaaatttaaaaaaaaaaa 4130  T
Q  472 nnnnnncaatttgaccacaaaacaacaatacaataggatt-caaaaaactt-acttgtttttg-tgattgaaattggtttggaatg 554  Q
           |||| ||||||||||||||||| ||||| ||||  ||||||||| ||||||||||| ||||||||||||| ||||||||    
T  4129 aaaaacaaattcgaccacaaaacaacaatgcaataagattaaaaaaaacttaacttgtttttgttgattgaaattggcttggaatg 4044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 4555 - 4400
Alignment:
Q  71 ctcctcaacctcgactgattgtacaccggcaccttcaaacccttcnnnnnnn--cgg-aaccatcacaaacaattttgtgccacgtcatatgtgattttt 167  Q
    ||||||||||| ||||||||||||||||||||||||  ||| |||         ||| |||||||||||||||||| |||||| |||||| | |||||||    
T  4555 ctcctcaacctggactgattgtacaccggcaccttcggaccattctttttttttcggtaaccatcacaaacaatttcgtgccatgtcataggcgattttt 4456  T
Q  168 cttt-gttcttctcatcatcctaaacgttaccctgattctaagacatatctacatt 222  Q
    |||| ||||||||||||| ||| || |||||||||||||| |||| ||||||||||    
T  4455 cttttgttcttctcatcaccctgaatgttaccctgattctgagacttatctacatt 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 4280 - 4241
Alignment:
Q  342 aattctacaacgattcatcaaaacctaaacctaacaattc 381  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4280 aattctacaacgattcatcaaaacctaaacctaacaattc 4241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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