View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0767_low_28 (Length: 331)

Name: NF0767_low_28
Description: NF0767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0767_low_28
NF0767_low_28
[»] chr3 (83 HSPs)
chr3 (168-290)||(16751565-16751687)
chr3 (168-290)||(19774477-19774599)
chr3 (168-247)||(27411044-27411123)
chr3 (168-247)||(15964000-15964078)
chr3 (168-247)||(15971848-15971926)
chr3 (168-239)||(17318111-17318182)
chr3 (168-239)||(4108214-4108284)
chr3 (168-239)||(4112066-4112136)
chr3 (168-239)||(7108760-7108830)
chr3 (168-239)||(7112695-7112765)
chr3 (168-247)||(15967924-15968002)
chr3 (168-239)||(22320728-22320798)
chr3 (168-239)||(22335783-22335853)
chr3 (168-239)||(28948906-28948976)
chr3 (179-247)||(37440504-37440572)
chr3 (168-239)||(11166503-11166573)
chr3 (168-239)||(14498469-14498539)
chr3 (168-239)||(30064911-30064982)
chr3 (168-239)||(55022049-55022119)
chr3 (178-239)||(8490047-8490108)
chr3 (178-247)||(14664794-14664863)
chr3 (178-247)||(14667958-14668027)
chr3 (168-239)||(11069212-11069282)
chr3 (175-249)||(11853911-11853985)
chr3 (168-230)||(15616699-15616760)
chr3 (178-239)||(8490154-8490215)
chr3 (178-247)||(11301277-11301346)
chr3 (178-245)||(5220147-5220214)
chr3 (208-275)||(49390330-49390397)
chr3 (208-290)||(18440570-18440652)
chr3 (208-290)||(19485644-19485726)
chr3 (221-270)||(12853049-12853098)
chr3 (221-290)||(14664725-14664794)
chr3 (221-290)||(14667889-14667958)
chr3 (221-285)||(7108574-7108638)
chr3 (221-285)||(7112509-7112573)
chr3 (221-285)||(11069026-11069090)
chr3 (221-285)||(11166695-11166759)
chr3 (221-285)||(14498283-14498347)
chr3 (221-285)||(15616513-15616577)
chr3 (221-285)||(22320542-22320606)
chr3 (221-285)||(22335597-22335661)
chr3 (221-285)||(28948720-28948784)
chr3 (221-285)||(30064725-30064789)
chr3 (221-285)||(55021863-55021927)
chr3 (221-280)||(11301388-11301447)
chr3 (178-249)||(14670231-14670301)
chr3 (185-239)||(4589816-4589870)
chr3 (221-298)||(4589867-4589946)
chr3 (240-290)||(12338828-12338878)
chr3 (221-275)||(14067703-14067757)
chr3 (178-248)||(14681753-14681822)
chr3 (224-290)||(18440492-18440558)
chr3 (224-290)||(19485566-19485632)
chr3 (221-290)||(12338842-12338911)
chr3 (221-290)||(12853062-12853131)
chr3 (222-271)||(22791677-22791726)
chr3 (191-239)||(19774613-19774661)
chr3 (221-259)||(8490213-8490251)
chr3 (221-259)||(8490249-8490287)
chr3 (208-285)||(11914694-11914772)
chr3 (168-202)||(14159826-14159860)
chr3 (208-285)||(24513307-24513385)
chr3 (222-290)||(14670164-14670231)
chr3 (208-259)||(1466100-1466151)
chr3 (221-290)||(14067721-14067787)
chr3 (173-207)||(4589991-4590025)
chr3 (221-259)||(14067917-14067955)
chr3 (221-259)||(16795742-16795780)
chr3 (221-259)||(17318334-17318372)
chr3 (221-259)||(17318370-17318408)
chr3 (221-259)||(18440490-18440528)
chr3 (221-259)||(18440568-18440606)
chr3 (221-259)||(19485564-19485602)
chr3 (221-259)||(19485642-19485680)
chr3 (185-239)||(27410899-27410953)
chr3 (222-290)||(1466102-1466171)
chr3 (222-259)||(14067856-14067893)
chr3 (238-275)||(27410976-27411013)
chr3 (221-257)||(1466061-1466097)
chr3 (225-273)||(14667819-14667867)
chr3 (222-290)||(14681686-14681753)
chr3 (221-272)||(22651573-22651625)
[»] chr1 (52 HSPs)
chr1 (168-290)||(39244876-39244998)
chr1 (168-290)||(39248431-39248553)
chr1 (168-290)||(41389324-41389446)
chr1 (168-239)||(1009784-1009854)
chr1 (168-239)||(1926128-1926198)
chr1 (168-239)||(16376379-16376449)
chr1 (168-239)||(20925142-20925212)
chr1 (168-247)||(33796634-33796716)
chr1 (168-239)||(52634855-52634925)
chr1 (191-239)||(41389262-41389310)
chr1 (221-288)||(20229938-20230005)
chr1 (221-290)||(35982327-35982396)
chr1 (221-285)||(21406543-21406607)
chr1 (221-285)||(33796418-33796482)
chr1 (185-239)||(20229874-20229928)
chr1 (208-290)||(28195094-28195176)
chr1 (225-290)||(21740466-21740531)
chr1 (221-290)||(22131829-22131898)
chr1 (221-285)||(1009598-1009662)
chr1 (221-285)||(1926320-1926384)
chr1 (221-285)||(16376571-16376635)
chr1 (225-297)||(20315791-20315862)
chr1 (221-285)||(20925334-20925398)
chr1 (221-289)||(33796281-33796348)
chr1 (221-285)||(52634684-52634748)
chr1 (178-249)||(41801010-41801080)
chr1 (225-275)||(20229984-20230034)
chr1 (228-290)||(41801080-41801142)
chr1 (225-290)||(20315603-20315668)
chr1 (225-290)||(41306224-41306289)
chr1 (191-239)||(39244814-39244862)
chr1 (191-239)||(39248369-39248417)
chr1 (221-259)||(21406433-21406471)
chr1 (221-285)||(12271051-12271116)
chr1 (225-290)||(21740401-21740466)
chr1 (221-285)||(22357215-22357280)
chr1 (221-285)||(22358901-22358966)
chr1 (183-275)||(41306369-41306460)
chr1 (221-269)||(35982315-35982363)
chr1 (222-290)||(41801113-41801180)
chr1 (225-290)||(20315823-20315885)
chr1 (225-272)||(21740354-21740401)
chr1 (241-275)||(12271038-12271072)
chr1 (226-272)||(20315539-20315585)
chr1 (178-275)||(21406469-21406564)
chr1 (221-259)||(22131791-22131829)
chr1 (221-259)||(22131827-22131865)
chr1 (221-259)||(22131896-22131934)
chr1 (183-290)||(21740499-21740606)
chr1 (221-258)||(28195093-28195130)
chr1 (225-290)||(41306289-41306354)
chr1 (222-290)||(22131898-22131966)
[»] chr7 (72 HSPs)
chr7 (168-298)||(18424530-18424663)
chr7 (191-290)||(18424666-18424765)
chr7 (168-247)||(45170998-45171076)
chr7 (168-239)||(32170-32240)
chr7 (168-239)||(71782-71852)
chr7 (168-239)||(75891-75961)
chr7 (168-239)||(12713985-12714055)
chr7 (168-239)||(18278504-18278574)
chr7 (168-239)||(18282467-18282537)
chr7 (179-247)||(39721383-39721451)
chr7 (168-239)||(12705642-12705712)
chr7 (168-239)||(12717809-12717879)
chr7 (168-239)||(12722720-12722790)
chr7 (178-247)||(2833093-2833162)
chr7 (178-244)||(2530979-2531045)
chr7 (178-247)||(7519933-7520002)
chr7 (179-236)||(15083413-15083470)
chr7 (221-290)||(2833195-2833263)
chr7 (222-275)||(10607143-10607196)
chr7 (221-290)||(25928183-25928252)
chr7 (221-288)||(26291364-26291431)
chr7 (221-290)||(2531045-2531114)
chr7 (221-290)||(6170747-6170816)
chr7 (221-290)||(9390364-9390433)
chr7 (221-290)||(16582721-16582790)
chr7 (225-290)||(17232048-17232113)
chr7 (221-285)||(31984-32048)
chr7 (221-285)||(12713799-12713863)
chr7 (221-285)||(12717623-12717687)
chr7 (221-285)||(12722534-12722598)
chr7 (178-249)||(25928110-25928183)
chr7 (185-239)||(26291441-26291495)
chr7 (221-290)||(2833162-2833230)
chr7 (221-290)||(6170780-6170849)
chr7 (225-290)||(14270736-14270801)
chr7 (225-290)||(16582659-16582724)
chr7 (225-290)||(17231853-17231918)
chr7 (225-290)||(17231918-17231983)
chr7 (225-290)||(17231983-17232048)
chr7 (221-290)||(18278254-18278322)
chr7 (221-290)||(18282217-18282285)
chr7 (221-290)||(20486903-20486971)
chr7 (208-275)||(6170828-6170895)
chr7 (225-272)||(8467858-8467905)
chr7 (178-237)||(16908188-16908246)
chr7 (178-249)||(20486971-20487041)
chr7 (208-285)||(8939661-8939739)
chr7 (193-290)||(14270769-14270865)
chr7 (221-259)||(18301531-18301569)
chr7 (225-267)||(26291335-26291377)
chr7 (221-270)||(9390351-9390400)
chr7 (225-290)||(14270671-14270736)
chr7 (221-285)||(15112375-15112440)
chr7 (221-285)||(15115947-15116012)
chr7 (183-275)||(17231747-17231838)
chr7 (178-290)||(8467777-8467890)
chr7 (221-275)||(16998076-16998131)
chr7 (228-275)||(18278294-18278340)
chr7 (228-275)||(18282257-18282303)
chr7 (221-259)||(6170745-6170783)
chr7 (241-275)||(15112362-15112396)
chr7 (241-275)||(15115934-15115968)
chr7 (221-290)||(9752340-9752409)
chr7 (240-285)||(12705834-12705879)
chr7 (221-290)||(14270704-14270772)
chr7 (221-290)||(16582623-16582691)
chr7 (225-290)||(17231821-17231885)
chr7 (221-290)||(17231882-17231950)
chr7 (221-290)||(17231947-17232015)
chr7 (221-290)||(17232012-17232080)
chr7 (208-275)||(15719548-15719616)
chr7 (183-275)||(16323503-16323588)
[»] chr6 (45 HSPs)
chr6 (168-290)||(16623083-16623205)
chr6 (168-247)||(31479183-31479262)
chr6 (168-247)||(23414037-23414115)
chr6 (168-239)||(11565923-11565993)
chr6 (168-239)||(19869690-19869760)
chr6 (168-239)||(22948178-22948248)
chr6 (168-239)||(22952134-22952204)
chr6 (168-239)||(23394129-23394199)
chr6 (168-239)||(23870622-23870692)
chr6 (168-239)||(23874578-23874648)
chr6 (168-239)||(23989021-23989091)
chr6 (168-238)||(14471354-14471424)
chr6 (168-239)||(8242935-8243005)
chr6 (168-239)||(12619817-12619887)
chr6 (168-239)||(16759298-16759368)
chr6 (178-247)||(22074997-22075066)
chr6 (221-288)||(1643542-1643609)
chr6 (185-239)||(23400974-23401028)
chr6 (178-247)||(22074890-22074958)
chr6 (178-239)||(22862017-22862077)
chr6 (221-290)||(18918411-18918479)
chr6 (221-285)||(8242749-8242813)
chr6 (221-285)||(11565737-11565801)
chr6 (221-285)||(12620009-12620073)
chr6 (221-285)||(22947992-22948056)
chr6 (221-285)||(22951948-22952012)
chr6 (221-285)||(23870436-23870500)
chr6 (221-285)||(23874392-23874456)
chr6 (221-285)||(23988835-23988899)
chr6 (185-239)||(1643619-1643673)
chr6 (178-249)||(2076635-2076708)
chr6 (185-239)||(18918350-18918403)
chr6 (221-290)||(22075066-22075135)
chr6 (221-290)||(22075099-22075168)
chr6 (191-239)||(16623219-16623267)
chr6 (178-290)||(2076519-2076635)
chr6 (221-272)||(15874924-15874976)
chr6 (225-269)||(18913329-18913373)
chr6 (221-275)||(2200815-2200870)
chr6 (178-267)||(23400889-23400976)
chr6 (178-207)||(1643471-1643500)
chr6 (225-290)||(18913297-18913361)
chr6 (225-290)||(31630888-31630953)
chr6 (183-275)||(18913220-18913314)
chr6 (185-229)||(18953192-18953236)
[»] chr4 (45 HSPs)
chr4 (168-290)||(15223841-15223963)
chr4 (168-239)||(9555591-9555661)
chr4 (168-239)||(14758401-14758471)
chr4 (168-239)||(14955166-14955236)
chr4 (168-239)||(25688964-25689034)
chr4 (178-247)||(20158198-20158267)
chr4 (178-247)||(20160874-20160943)
chr4 (178-247)||(20163652-20163721)
chr4 (168-236)||(12486746-12486813)
chr4 (168-239)||(4562260-4562330)
chr4 (168-239)||(5757785-5757855)
chr4 (168-239)||(33741361-33741431)
chr4 (179-247)||(10712012-10712080)
chr4 (179-247)||(10925782-10925850)
chr4 (221-290)||(15189760-15189829)
chr4 (178-247)||(20158091-20158159)
chr4 (208-290)||(15189714-15189796)
chr4 (185-239)||(27533008-27533062)
chr4 (178-247)||(20160767-20160835)
chr4 (178-247)||(20163545-20163613)
chr4 (221-290)||(27532932-27533000)
chr4 (221-285)||(4562452-4562516)
chr4 (221-285)||(9555405-9555469)
chr4 (221-285)||(14758593-14758657)
chr4 (221-285)||(14955358-14955422)
chr4 (221-285)||(25688778-25688842)
chr4 (221-285)||(33741175-33741239)
chr4 (221-275)||(631592-631646)
chr4 (225-290)||(15481980-15482045)
chr4 (182-239)||(17807243-17807299)
chr4 (225-290)||(19857001-19857066)
chr4 (221-285)||(5757977-5758041)
chr4 (221-288)||(12423211-12423281)
chr4 (221-275)||(23996762-23996813)
chr4 (225-290)||(361543-361608)
chr4 (225-290)||(15481915-15481980)
chr4 (239-290)||(12423196-12423247)
chr4 (223-269)||(15098691-15098737)
chr4 (221-259)||(15189793-15189831)
chr4 (221-259)||(17048967-17049005)
chr4 (225-290)||(6190069-6190134)
chr4 (225-290)||(15482013-15482077)
chr4 (241-290)||(22634792-22634841)
chr4 (222-290)||(17048969-17049037)
chr4 (183-275)||(19856895-19856986)
[»] chr5 (30 HSPs)
chr5 (178-298)||(15237854-15237977)
chr5 (191-290)||(15237752-15237851)
chr5 (168-247)||(10752096-10752175)
chr5 (168-247)||(18355335-18355414)
chr5 (168-239)||(40724510-40724581)
chr5 (168-239)||(19473659-19473729)
chr5 (168-239)||(20294962-20295032)
chr5 (174-247)||(20911836-20911909)
chr5 (221-290)||(22108185-22108254)
chr5 (221-290)||(22120330-22120399)
chr5 (178-247)||(24768164-24768232)
chr5 (221-290)||(5889804-5889873)
chr5 (221-290)||(18355045-18355113)
chr5 (221-285)||(19473851-19473915)
chr5 (221-285)||(20294776-20294840)
chr5 (221-275)||(24768246-24768300)
chr5 (221-285)||(18355146-18355213)
chr5 (221-290)||(22108152-22108221)
chr5 (221-270)||(22120284-22120333)
chr5 (221-291)||(5889836-5889909)
chr5 (193-275)||(20912133-20912214)
chr5 (221-259)||(22108150-22108188)
chr5 (241-290)||(5889873-5889922)
chr5 (240-285)||(11226427-11226472)
chr5 (208-259)||(21742238-21742289)
chr5 (208-290)||(21742240-21742323)
chr5 (178-249)||(29447377-29447447)
chr5 (221-290)||(22120297-22120366)
chr5 (178-207)||(40727230-40727259)
chr5 (240-268)||(40727171-40727199)
[»] scaffold0141 (1 HSPs)
scaffold0141 (168-247)||(15087-15165)
[»] chr8 (34 HSPs)
chr8 (168-247)||(21828943-21829021)
chr8 (168-247)||(30941077-30941155)
chr8 (168-239)||(21977607-21977677)
chr8 (179-247)||(21410088-21410156)
chr8 (179-247)||(21804580-21804648)
chr8 (168-239)||(22111112-22111182)
chr8 (168-239)||(43250872-43250942)
chr8 (178-247)||(21386407-21386476)
chr8 (178-239)||(21386515-21386576)
chr8 (172-239)||(21973516-21973582)
chr8 (178-247)||(14398770-14398839)
chr8 (168-226)||(18863623-18863680)
chr8 (185-239)||(15924230-15924284)
chr8 (239-288)||(15924294-15924343)
chr8 (225-290)||(38550622-38550687)
chr8 (221-285)||(22110926-22110990)
chr8 (221-285)||(43250686-43250750)
chr8 (176-275)||(1323859-1323957)
chr8 (222-271)||(5610331-5610380)
chr8 (223-275)||(20983487-20983539)
chr8 (222-290)||(20983505-20983573)
chr8 (221-285)||(21973708-21973772)
chr8 (245-285)||(21977799-21977839)
chr8 (225-272)||(38550705-38550752)
chr8 (240-290)||(14398839-14398889)
chr8 (221-275)||(20983553-20983607)
chr8 (225-270)||(1323734-1323779)
chr8 (225-290)||(13428679-13428744)
chr8 (178-249)||(23913437-23913507)
chr8 (225-275)||(13428727-13428776)
chr8 (208-285)||(16402245-16402323)
chr8 (225-290)||(1323779-1323844)
chr8 (241-290)||(23913389-23913437)
chr8 (225-290)||(38550720-38550784)
[»] chr2 (21 HSPs)
chr2 (168-247)||(1282512-1282590)
chr2 (168-247)||(41531940-41532018)
chr2 (168-239)||(10102783-10102853)
chr2 (168-239)||(24629454-24629524)
chr2 (168-239)||(24648416-24648486)
chr2 (168-239)||(30345990-30346060)
chr2 (168-238)||(27380328-27380397)
chr2 (168-238)||(27384374-27384443)
chr2 (168-239)||(27600893-27600963)
chr2 (178-245)||(31344279-31344346)
chr2 (178-239)||(12902360-12902420)
chr2 (221-285)||(10102975-10103039)
chr2 (221-285)||(24629646-24629710)
chr2 (221-285)||(27600707-27600771)
chr2 (221-285)||(30346182-30346246)
chr2 (221-285)||(27384565-27384629)
chr2 (221-290)||(31344211-31344279)
chr2 (221-285)||(27380519-27380583)
chr2 (178-216)||(9784216-9784253)
chr2 (240-285)||(24648249-24648294)
chr2 (248-296)||(9784185-9784233)
[»] scaffold0525 (2 HSPs)
scaffold0525 (168-239)||(4833-4903)
scaffold0525 (221-285)||(5025-5089)
[»] scaffold0023 (2 HSPs)
scaffold0023 (178-247)||(11996-12065)
scaffold0023 (178-247)||(12104-12172)
[»] scaffold0157 (1 HSPs)
scaffold0157 (168-236)||(33664-33731)
[»] scaffold0349 (2 HSPs)
scaffold0349 (168-239)||(11563-11633)
scaffold0349 (221-285)||(11392-11456)
[»] scaffold0061 (2 HSPs)
scaffold0061 (168-239)||(68155-68225)
scaffold0061 (240-285)||(68347-68392)
[»] scaffold0486 (2 HSPs)
scaffold0486 (178-247)||(8944-9013)
scaffold0486 (221-290)||(8875-8944)
[»] scaffold0372 (2 HSPs)
scaffold0372 (168-239)||(5994-6064)
scaffold0372 (239-285)||(6186-6232)
[»] scaffold0029 (9 HSPs)
scaffold0029 (168-239)||(79634-79704)
scaffold0029 (185-239)||(66417-66471)
scaffold0029 (221-290)||(62563-62631)
scaffold0029 (221-290)||(66479-66547)
scaffold0029 (221-290)||(79418-79486)
scaffold0029 (185-239)||(62501-62555)
scaffold0029 (174-207)||(62675-62708)
scaffold0029 (228-274)||(79458-79503)
scaffold0029 (178-207)||(66591-66620)
[»] scaffold0601 (4 HSPs)
scaffold0601 (221-290)||(8542-8611)
scaffold0601 (221-290)||(8608-8677)
scaffold0601 (221-290)||(8575-8644)
scaffold0601 (221-259)||(8540-8578)
[»] scaffold0327 (3 HSPs)
scaffold0327 (221-290)||(19118-19187)
scaffold0327 (221-290)||(19222-19291)
scaffold0327 (178-207)||(19291-19320)
[»] scaffold0293 (2 HSPs)
scaffold0293 (221-290)||(21151-21220)
scaffold0293 (178-249)||(21078-21151)
[»] scaffold0200 (2 HSPs)
scaffold0200 (221-290)||(11051-11120)
scaffold0200 (221-290)||(11084-11153)
[»] scaffold0166 (2 HSPs)
scaffold0166 (178-247)||(10661-10729)
scaffold0166 (221-275)||(10743-10797)
[»] scaffold0380 (2 HSPs)
scaffold0380 (221-285)||(945-1009)
scaffold0380 (221-259)||(832-870)
[»] scaffold1852 (2 HSPs)
scaffold1852 (178-229)||(526-577)
scaffold1852 (183-288)||(401-505)
[»] scaffold0575 (2 HSPs)
scaffold0575 (178-249)||(6761-6831)
scaffold0575 (222-290)||(6831-6898)
[»] scaffold0031 (2 HSPs)
scaffold0031 (178-249)||(36981-37051)
scaffold0031 (223-290)||(37051-37117)
[»] scaffold0299 (2 HSPs)
scaffold0299 (240-290)||(6029-6079)
scaffold0299 (221-290)||(6043-6112)
[»] scaffold0239 (1 HSPs)
scaffold0239 (184-285)||(22148-22249)
[»] scaffold0013 (1 HSPs)
scaffold0013 (221-290)||(74072-74142)
[»] scaffold0278 (3 HSPs)
scaffold0278 (225-290)||(6957-7022)
scaffold0278 (225-290)||(7022-7087)
scaffold0278 (225-290)||(6925-6989)
[»] scaffold0116 (5 HSPs)
scaffold0116 (225-290)||(44421-44486)
scaffold0116 (225-290)||(44486-44551)
scaffold0116 (183-275)||(44566-44657)
scaffold0116 (221-290)||(44454-44522)
scaffold0116 (225-290)||(44519-44583)
[»] scaffold0028 (1 HSPs)
scaffold0028 (178-239)||(59850-59910)
[»] scaffold0043 (2 HSPs)
scaffold0043 (225-272)||(9066-9113)
scaffold0043 (225-290)||(9034-9098)
[»] scaffold0484 (1 HSPs)
scaffold0484 (221-275)||(24-78)
[»] scaffold0142 (2 HSPs)
scaffold0142 (221-267)||(8504-8550)
scaffold0142 (241-285)||(8461-8505)
[»] scaffold0124 (2 HSPs)
scaffold0124 (221-271)||(25419-25469)
scaffold0124 (222-290)||(25433-25501)
[»] scaffold0109 (2 HSPs)
scaffold0109 (183-229)||(36942-36988)
scaffold0109 (221-259)||(37063-37101)
[»] scaffold0165 (4 HSPs)
scaffold0165 (221-290)||(2908-2977)
scaffold0165 (221-290)||(6971-7040)
scaffold0165 (222-290)||(2876-2944)
scaffold0165 (222-290)||(6939-7007)
[»] scaffold0004 (6 HSPs)
scaffold0004 (183-275)||(361945-362036)
scaffold0004 (225-270)||(362051-362096)
scaffold0004 (225-272)||(362214-362261)
scaffold0004 (225-290)||(362019-362083)
scaffold0004 (221-290)||(362080-362148)
scaffold0004 (221-290)||(362145-362214)
[»] scaffold0056 (1 HSPs)
scaffold0056 (225-272)||(79884-79931)
[»] scaffold0599 (1 HSPs)
scaffold0599 (208-285)||(6445-6523)
[»] scaffold0561 (1 HSPs)
scaffold0561 (221-285)||(10110-10175)
[»] scaffold0123 (1 HSPs)
scaffold0123 (221-285)||(15-80)
[»] scaffold0076 (1 HSPs)
scaffold0076 (221-285)||(26824-26889)
[»] scaffold0020 (1 HSPs)
scaffold0020 (221-285)||(170395-170460)
[»] scaffold0462 (1 HSPs)
scaffold0462 (221-272)||(7752-7804)
[»] scaffold0112 (1 HSPs)
scaffold0112 (183-252)||(22293-22364)
[»] scaffold0025 (1 HSPs)
scaffold0025 (220-275)||(75855-75911)


Alignment Details
Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 16751687 - 16751565
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16751687 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 16751588  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  16751587 catcttatgaaaacataacaaca 16751565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 19774477 - 19774599
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19774477 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 19774576  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  19774577 catcttatgaaaacataacaaca 19774599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 27411123 - 27411044
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27411123 catcatcaataacataacataatatttacttaataataatttatcatatatggaacaacatattcatcacttaataataa 27411044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 15964000 - 15964078
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  15964000 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 15964078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 15971848 - 15971926
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  15971848 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 15971926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 17318182 - 17318111
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  17318182 catcatcaataacataacataatattcacttaataataattaatcatatatagatcaacatattcatcactt 17318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 4108284 - 4108214
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4108284 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 4108214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 4112136 - 4112066
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4112136 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 4112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 7108760 - 7108830
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7108760 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 7108830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 7112695 - 7112765
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7112695 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 7112765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 15967924 - 15968002
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||    
T  15967924 catcatcaataacataacataatattcacttaataat-attagtcatatatagaacaacatattcatcacttaataataa 15968002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 22320728 - 22320798
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22320728 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 22320798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 22335783 - 22335853
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22335783 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 22335853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 28948906 - 28948976
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  28948906 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 28948976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 37440572 - 37440504
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  37440572 acataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 37440504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 11166573 - 11166503
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  11166573 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 11166503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 14498469 - 14498539
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  14498469 catcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaacatattcatcactt 14498539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 30064911 - 30064982
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||||||||    
T  30064911 catcatcaataacataacataatattcacttaataataattaatcctatataggacaacataatcatcactt 30064982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 55022049 - 55022119
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  55022049 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 55022119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 8490108 - 8490047
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  8490108 aacataacataatattcacttaataataattaatcatatatagtacaacatattcatcactt 8490047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 14664794 - 14664863
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  14664794 aacataacataatattcacttaataataattaatcatatatagtacaacataatcatcacttaataataa 14664863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 14667958 - 14668027
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  14667958 aacataacataatattcacttaataataattaatcatatatagtacaacataatcatcacttaataataa 14668027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 11069212 - 11069282
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  11069212 catcatcaataacataatataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 11069282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 11853911 - 11853985
Alignment:
Q  175 aataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| || || |||||||||    
T  11853911 aataatataacataatattcacttaataataattaatcatatatagtacaacatattcaccagttaataataata 11853985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 15616699 - 15616760
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatat 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  15616699 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatat 15616760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 8490215 - 8490154
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  8490215 aacataacataatattcacttaataataattaatcatatatcgtacaacatattcataactt 8490154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 11301346 - 11301277
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||| |||||||    
T  11301346 aacataacataatattcacttaataataattaatcatatatagtacaacatattcgccacttaataataa 11301277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 5220147 - 5220214
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataat 245  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| |||||    
T  5220147 aacataacataatattctcttaataataattaatcatatatagtacatcatattcatcacttaataat 5220214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 49390397 - 49390330
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||   ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  49390397 taatcatatagacaacaacatattcatcatcttataataatataacaacaacatattcatcatcttat 49390330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 18440652 - 18440570
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||   |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  18440652 taatcatataaacaacaacttattcatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 18440570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 19485726 - 19485644
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||   |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  19485726 taatcatataaacaacaacttattcatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 19485644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 12853098 - 12853049
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcat 270  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12853098 aacaacatattcatcattttataataatataacaacaacatattcatcat 12853049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 14664725 - 14664794
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| ||||||||||| ||||||||||||||||||| |||| |||||||||    
T  14664725 aacaacatattcatcttcttatattaatataacaaaaacgtattcatcatcttataaaaatataacaaca 14664794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 14667889 - 14667958
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| ||||||||||||||| ||||||||||||||| |||| |||||||||    
T  14667889 aacaacatattcatcttcttatattaatataacaacaacatattcatcatcttataaaaatataacaaca 14667958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 7108574 - 7108638
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  7108574 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 7108638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 7112509 - 7112573
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  7112509 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 7112573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 11069026 - 11069090
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  11069026 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 11069090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 11166759 - 11166695
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  11166759 aacaacatattcatcctcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 11166695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 14498283 - 14498347
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  14498283 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 14498347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 15616513 - 15616577
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  15616513 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 15616577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22320542 - 22320606
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  22320542 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 22320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22335597 - 22335661
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  22335597 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 22335661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 28948720 - 28948784
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  28948720 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 28948784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 30064725 - 30064789
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  30064725 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 30064789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 55021863 - 55021927
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  55021863 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 55021927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 11301447 - 11301388
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaa 280  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||||    
T  11301447 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttataaaaa 11301388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 14670231 - 14670301
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||| ||||||||| |   |||||||| ||||||||| |||||||||    
T  14670231 aacataacataatattcacttaataataa-taatcatatctaatacaacataatcatcacttaataataata 14670301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 4589870 - 4589816
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||| | |||||||| |||||||||    
T  4589870 cataacattcacttaataataattaatcatatataggacaacataatcatcactt 4589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 4589946 - 4589867
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaa---cataacaacatattcata 298  Q
    |||||||||||||||   ||||| || |||||||||||||||||||||||||||||||||   || |||||||||||||||    
T  4589946 aacaacatattcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatatcacaacaacatattcata 4589867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 12338828 - 12338878
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  12338828 tataataatataacaacaacatattcatcttcttatgaaaatataacaaca 12338878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 14067757 - 14067703
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||| |||||||||  |||||| ||||||||||||||||||||||||||||||    
T  14067757 aacaacgtattcatcatcttataaaaatataacaacaacgtattcatcatcttat 14067703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 14681753 - 14681822
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataat 248  Q
    ||||||||||||||||||||||||||||| ||||||||| |   |||||||| ||||||||| ||||||||    
T  14681753 aacataacataatattcacttaataataa-taatcatatctaatacaacataatcatcacttaataataat 14681822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 18440558 - 18440492
Alignment:
Q  224 aacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||  ||||||||||||| ||||||| ||||||||||||||| | || |||||||||    
T  18440558 aacatattcatcatcttataataatatagcaacaacatattcatcatcttataataatataacaaca 18440492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 19485632 - 19485566
Alignment:
Q  224 aacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||  ||||||||||||| ||||||| ||||||||||||||| | || |||||||||    
T  19485632 aacatattcatcatcttataataatatagcaacaacatattcatcatcttataataatataacaaca 19485566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 12338842 - 12338911
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   |||| | |||||||||||||| |||||||| ||||||||||| |||||||||    
T  12338842 aacaacatattcatcttcttatgaaaatataacaacaacatattcatcttcttatgaaaatataacaaca 12338911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 12853131 - 12853062
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||| || ||| ||||||||||||||| |||||||||| |||| | || |||||||||    
T  12853131 aacaacatattcatcatttaatagtaatataacaacaacatattcatcattttataataatataacaaca 12853062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 22791677 - 22791726
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatc 271  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  22791677 acaacataatcatcacttaataataatataacaacaacatattcatcatc 22791726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 19774613 - 19774661
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  19774613 attcacttaataataattaatcatatatagtacaacatatccatcactt 19774661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 8490251 - 8490213
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  8490251 aacaacatattcatcattttataataatataacaacaac 8490213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 8490287 - 8490249
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  8490287 aacaacatattcatcattttataataatataacaacaac 8490249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 11914772 - 11914694
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||  |||||||||||||||||  ||||||||| |||| ||||||| |||||| |||||||| | |||||||    
T  11914772 taatcatataaagaacaacatattcatcatcttataataacataagcaacaacatattcaccatcttataataacataa 11914694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 14159860 - 14159826
Alignment:
Q  168 catcatcaataacataacataatattcacttaata 202  Q
    |||||||||||||||||||||||||||||||||||    
T  14159860 catcatcaataacataacataatattcacttaata 14159826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 24513307 - 24513385
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||  |||||||||||||||||  ||||||||| ||||  |||||| ||||||||||||||| | |||||||    
T  24513307 taatcatataaagaacaacatattcatcatcttataataacataagaaacaacatattcatcatcttataataacataa 24513385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 14670164 - 14670231
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||| ||| ||||||  ||||||||||||| ||||||| ||||||||||||||| |||| |||||||||    
T  14670164 acaatataatcatcatcttataataatatatcaacaac-tattcatcatcttatcaaaatataacaaca 14670231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 1466151 - 1466100
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||   ||||||||||||||||  |||||||||||||||||||||    
T  1466151 taatcatatagacaacaacatattcatcatcttataataatataacaacaac 1466100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 14067787 - 14067721
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| |||||   ||||||||||||||||||||||| |||| |||||||||    
T  14067787 aacaacatattcatcttcttatattaata---caacaacgtattcatcatcttataaaaatataacaaca 14067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 4590025 - 4589991
Alignment:
Q  173 tcaataacataacataatattcacttaataataat 207  Q
    |||| ||||||||||||||||||||||||||||||    
T  4590025 tcaacaacataacataatattcacttaataataat 4589991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 14067955 - 14067917
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  14067955 aacaacatagtcatcattttataataatataacaacaac 14067917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 16795742 - 16795780
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  16795742 aacaagatattcatcattttataataatataacaacaac 16795780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 17318372 - 17318334
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  17318372 aacaacatattcgtcattttataataatataacaacaac 17318334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 17318408 - 17318370
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  17318408 aacaacatattcatcatattataataatataacaacaac 17318370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 18440528 - 18440490
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  18440528 aacaacatattcatcatcttataataatataacaacaac 18440490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 18440606 - 18440568
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  18440606 aacaacatattcatcatcttataataatataacaacaac 18440568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 19485602 - 19485564
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  19485602 aacaacatattcatcatcttataataatataacaacaac 19485564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 19485680 - 19485642
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  19485680 aacaacatattcatcatcttataataatataacaacaac 19485642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 27410953 - 27410899
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| ||||| |||||||||||||||||||||| | |||||||| || ||||||    
T  27410953 cataacattcagttaataataattaatcatatatagtacaacatactcgtcactt 27410899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 1466171 - 1466102
Alignment:
Q  222 acaacatattcatcactttataataatata-acaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||| || |||||| ||||| ||||| |||||||| ||||||||||||||| | || |||||||||    
T  1466171 acaacataatcctcacttcataatcatatagacaacaacatattcatcatcttataataatataacaaca 1466102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 14067893 - 14067856
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaac 259  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  14067893 acaacatagtcatcattttataataatataacaacaac 14067856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 27411013 - 27410976
Alignment:
Q  238 tttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  27411013 tttataataatataacaacaacatattcatcttcttat 27410976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 1466097 - 1466061
Alignment:
Q  221 aacaacatattcatcactttataataatataacaaca 257  Q
    ||||||||||||||||  |||||||||||||||||||    
T  1466097 aacaacatattcatcatcttataataatataacaaca 1466061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 14667819 - 14667867
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatctt 273  Q
    ||||||| ||||  ||||||||||||||||||||| ||| |||||||||    
T  14667819 acatattaatcatcttataataatataacaacaacatatacatcatctt 14667867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 14681686 - 14681753
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||| ||| ||||||  ||||||||||||| ||||||| |||| |||||||||| |||| |||||||||    
T  14681686 acaatataatcatcatcttataataatatatcaacaac-tatttatcatcttataaaaatataacaaca 14681753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 22651573 - 22651625
Alignment:
Q  221 aacaacatattcatcactttataataatat-aacaacaacgtattcatcatct 272  Q
    ||||||||| ||||||  |||||||||||| ||||||||| ||||||||||||    
T  22651573 aacaacataatcatcatcttataataatataaacaacaacatattcatcatct 22651625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 39244998 - 39244876
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39244998 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 39244899  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  39244898 catcttatgaaaacataacaaca 39244876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 39248553 - 39248431
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39248553 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 39248454  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  39248453 catcttatgaaaacataacaaca 39248431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 41389446 - 41389324
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41389446 catcatcaataacataatataatattcacttaataataattaatcatatatgaaacaacatattcatcactttataataatataacaacaacgtattcat 41389347  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  41389346 catcttatgaaaacataacaaca 41389324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 1009784 - 1009854
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1009784 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 1009854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 1926198 - 1926128
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1926198 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 1926128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 16376449 - 16376379
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16376449 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 16376379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 20925212 - 20925142
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20925212 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 20925142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 33796634 - 33796716
Alignment:
Q  168 catcatcaataacataacataatattcacttaat---aataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||| |||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||| |||||||    
T  33796634 catcttcaataacataacataatattcacttaataataataattaatcatatatagaacaacatattcatcacttaataataa 33796716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 52634855 - 52634925
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  52634855 catcatcaataacataacataatattcacttaataat-actaatcatatatagaacaacatattcatcactt 52634925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 41389310 - 41389262
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41389310 attcacttaataataattaatcatatatggaacaacatattcatcactt 41389262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 20230005 - 20229938
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaa 288  Q
    |||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  20230005 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataacaa 20229938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 35982396 - 35982327
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  35982396 aacaacatattcatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 35982327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 21406543 - 21406607
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  21406543 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 21406607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 33796418 - 33796482
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  33796418 aacaacatattcatcattttataataatataacaacaacatatacatcatcttataaaaatataa 33796482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 20229928 - 20229874
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  20229928 cataacattcacttaataataattaatcatatatagtacaacatattcatcactt 20229874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 28195176 - 28195094
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||   |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  28195176 taatcatataaacaacaacttattcatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 28195094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 21740531 - 21740466
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| || | || |||||||||    
T  21740531 acatattcatcatcttataataatataacaacaacgtattcatcatctcatcataatataacaaca 21740466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22131898 - 22131829
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||| |||| | || |||||||||    
T  22131898 aacaacatattcatcattttataataatataacaacaacatgttcatcattttataataatataacaaca 22131829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 1009598 - 1009662
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  1009598 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 1009662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 1926384 - 1926320
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  1926384 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 1926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 16376635 - 16376571
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  16376635 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 16376571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 20315791 - 20315862
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaacatattcat 297  Q
    ||||||||||||  |||||||||||||||||| || ||||||||||||||| | || ||||||||||||||||    
T  20315791 acatattcatcatcttataataatataacaac-acatattcatcatcttataataatataacaacatattcat 20315862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 20925398 - 20925334
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  20925398 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 20925334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 33796281 - 33796348
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaac 289  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  33796281 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataacaac 33796348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 52634684 - 52634748
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  52634684 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 52634748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 41801080 - 41801010
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||| ||||||||| |   |||||||| ||||||||| |||||||||    
T  41801080 aacataacataatattcacttaataataa-taatcatatctaatacaacataatcatcacttaataataata 41801010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 20230034 - 20229984
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  20230034 acatattcatcattttataataatataacaacaacatattcatcttcttat 20229984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 41801142 - 41801080
Alignment:
Q  228 tattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||  |||||| |||||||||||||| ||||||||||||||| |||| |||||||||    
T  41801142 tattcatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataacaaca 41801080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 20315603 - 20315668
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  20315603 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 20315668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 41306289 - 41306224
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  41306289 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 41306224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 39244862 - 39244814
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  39244862 attcacttaataataattaatcatatatagtacaacatatccatcactt 39244814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 39248417 - 39248369
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  39248417 attcacttaataataattaatcatatatagtacaacatatccatcactt 39248369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 21406433 - 21406471
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  21406433 aacaacatattcatcattttataataatataacaacaac 21406471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 12271051 - 12271116
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  |||||||||||||| ||||||| |||| |||||||||| | |||||||    
T  12271051 aacaacatattcatcatcttataataatataagcaacaacatattaatcatcttataataacataa 12271116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 21740466 - 21740401
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||| ||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  21740466 acatatttatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 21740401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22357215 - 22357280
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  ||||||||| |||| ||||||| ||||||||||||||| | |||||||    
T  22357215 aacaacatattcatcatcttataataaaataagcaacaacatattcatcatcttataataacataa 22357280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22358901 - 22358966
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  ||||||||| |||| ||||||| ||||||||||||||| | |||||||    
T  22358901 aacaacatattcatcatcttataataaaataagcaacaacatattcatcatcttataataacataa 22358966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 41306460 - 41306369
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttat 275  Q
    ||||||||  ||||||||||||||| |||||||||    |||||||| ||||||||| |||||||||| |||||| || |||||||||||||||    
T  41306460 aacataatcatcacttaataataat-aatcatatacaacacaacataatcatcacttaataataatataaacaac-acatattcatcatcttat 41306369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 35982363 - 35982315
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatca 269  Q
    ||||||||||||||||  ||||||||||||||||||||| || ||||||    
T  35982363 aacaacatattcatcatcttataataatataacaacaacataatcatca 35982315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 41801180 - 41801113
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||| ||| ||||||  ||||||||||||| ||||||| ||||||||||||||| |||| |||||||||    
T  41801180 acaatataatcatcatcttataataatatatcaacaac-tattcatcatcttataaaaatataacaaca 41801113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 20315823 - 20315885
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  |||||||||||||||||||   |||||||||||| || |||| |||||||||    
T  20315823 acatattcatcatcttataataatataacaaca---tattcatcatctcatcaaaatataacaaca 20315885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 21740401 - 21740354
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    ||||||| ||||  ||||||||||||||||||||| ||||||||||||    
T  21740401 acatatttatcatcttataataatataacaacaacatattcatcatct 21740354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 12271038 - 12271072
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||||||||||| |||||||||||||||    
T  12271038 ataataatataacaacaacatattcatcatcttat 12271072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 20315539 - 20315585
Alignment:
Q  226 catattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    |||||||||||  ||| ||||||||||||||||| ||||||||||||    
T  20315539 catattcatcatcttaaaataatataacaacaacatattcatcatct 20315585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 21406469 - 21406564
Alignment:
Q  178 aacataacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||||||||||||||||||||||  |||| ||||||   ||| |||  || |||   |||||||||||||||||||| |||||||| ||||||    
T  21406469 aacataacataatattcacttaataataataataattatatat---acatcat-ctcgtcataatataataatataacaacaacatattcatcttcttat 21406564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 22131829 - 22131791
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  22131829 aacaatatattcatcattttataataatataacaacaac 22131791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 22131865 - 22131827
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  22131865 aacaacatgttcatcattttataataatataacaacaac 22131827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 22131934 - 22131896
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  22131934 aacaacatattcaccattttataataatataacaacaac 22131896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 290
Target Start/End: Complemental strand, 21740606 - 21740499
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaac-aacatattcatcactttataataatat-aacaacaacgtattcatcatcttatgaaaa 280  Q
    ||||||||  |||||||||||||| ||||||||||    || |||||| ||||||||| |||||||||| |||||| || ||||||||||||||| | ||    
T  21740606 aacataatcatcacttaataataa-taatcatatacaacacaaacataatcatcacttaataataatataaacaac-acatattcatcatcttataataa 21740509  T
Q  281 cataacaaca 290  Q
     |||||||||    
T  21740508 tataacaaca 21740499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 28195130 - 28195093
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaa 258  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  28195130 aacaacatattcatcatcttataataatataacaacaa 28195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 41306354 - 41306289
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  |||||||| |||||||||||| |||| ||||||| || | || |||||||||    
T  41306354 acatattcatcatcttataatagtataacaacaacatattaatcatctcatcataatataacaaca 41306289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 22131966 - 22131898
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||  |||||  ||||||||||||||||||||| |||||| ||| |||| | || |||||||||    
T  22131966 acaacataaacatcatcttataataatataacaacaacatattcaccattttataataatataacaaca 22131898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 18424530 - 18424663
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18424530 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 18424629  T
Q  268 catcttatgaaaacat---aacaacatattcata 298  Q
    ||||||||||||||||   |||||||||||||||    
T  18424630 catcttatgaaaacatagcaacaacatattcata 18424663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 18424666 - 18424765
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18424666 attcacttaataataattaatcatatatagtacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 18424765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 45171076 - 45170998
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  45171076 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 45170998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 32170 - 32240
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  32170 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 32240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 71852 - 71782
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  71852 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 71782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 75961 - 75891
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  75961 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 75891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 12713985 - 12714055
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12713985 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 12714055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 18278504 - 18278574
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18278504 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 18278574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 18282467 - 18282537
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18282467 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 18282537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 39721383 - 39721451
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  39721383 acataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 39721451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 12705712 - 12705642
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  12705712 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcataactt 12705642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 12717809 - 12717879
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  12717809 catcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaacatattcatcactt 12717879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 12722720 - 12722790
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  12722720 catcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaacatattcatcactt 12722790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 2833162 - 2833093
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  2833162 aacataacataatattcacttaataataattaatcatatatagtacaacataatcatcacttaataataa 2833093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 2531045 - 2530979
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataa 244  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  2531045 aacataacataatattctcttaataataattaatcatatatagtacaacatattcatcacttaataa 2530979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 7520002 - 7519933
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||||||| |||||||    
T  7520002 aacataacataatattcccttaatattaattaatcatatatagtacaacatattcatcacttaataataa 7519933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 15083413 - 15083470
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatca 236  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  15083413 acataacataatattcacttaataataattaatcatatatagtacaacatattcatca 15083470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 2833263 - 2833195
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  2833263 aacaacatattcatcttcttataataatataacaacaacgtattcatcatcttat-aaaatataacaaca 2833195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 10607196 - 10607143
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10607196 acaacatattcatcattttataataatataacaacaacatattcatcatcttat 10607143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 25928252 - 25928183
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  |||||| |||||||||||||| ||||||||||||||| |||| |||||||||    
T  25928252 aacaacatattcatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataacaaca 25928183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 26291364 - 26291431
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaa 288  Q
    ||||||||||||||    ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  26291364 aacaacatattcattttcttatattaatataacaacaacgtattcatcatcttatgaaaatataacaa 26291431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 2531114 - 2531045
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||| ||||||   ||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  2531114 aacaacatgttcatcttcttatattaatataacaacaacgtaatcatcatcttatgaaaatataacaaca 2531045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 6170816 - 6170747
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  6170816 aacaacatattgatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 6170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 9390433 - 9390364
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  ||||||||||||||||||| | ||||||||||||||| | || |||||||||    
T  9390433 aacaacatattcatcatcttataataatataacaacatcatattcatcatcttataataatataacaaca 9390364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 16582721 - 16582790
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  16582721 aacaacatactcatcattttataataatataacaacaacatattcaccatcttatagaaatataacaaca 16582790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17232048 - 17232113
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | ||||||||||||    
T  17232048 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataacataacaaca 17232113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 31984 - 32048
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  31984 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 32048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 12713799 - 12713863
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  12713799 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 12713863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 12717623 - 12717687
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  12717623 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 12717687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 12722534 - 12722598
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  12722534 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 12722598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 25928183 - 25928110
Alignment:
Q  178 aacataacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||||  ||||||||| |   |||||||| ||||||||| |||||||||    
T  25928183 aacataacataatattcacttaataataataataatcatatctaatacaacataatcatcacttaataataata 25928110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 26291441 - 26291495
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||| |||||||    
T  26291441 cataacattcacttaataataattaatcatatatagtacaacatatttatcactt 26291495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 2833230 - 2833162
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||| |||||||||  |||||| |||||||||||||| ||||||||||||||| |||| |||||||||    
T  2833230 aacaacgtattcatcatcttataa-aatataacaacaacatattcatcatcttataaaaatataacaaca 2833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 6170849 - 6170780
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| |||||||||| | || |||||||||    
T  6170849 aacaacatattcatcatcttataataatatgacaacaacatattgatcatcttataataatataacaaca 6170780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 14270801 - 14270736
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  14270801 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 14270736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 16582659 - 16582724
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  16582659 acatattcatcatcttataataatataacaacaacatattcaccatcttatagaaatataacaaca 16582724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17231853 - 17231918
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  17231853 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 17231918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17231918 - 17231983
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  17231918 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 17231983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17231983 - 17232048
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  17231983 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 17232048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 18278254 - 18278322
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| |||||||||||||| |||||||||||||||| |||| |||||||||    
T  18278254 aacaacatattcatcttcttatattaatataacaacaatgtattcatcatcttat-aaaatataacaaca 18278322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 18282217 - 18282285
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| |||||||||||||| |||||||||||||||| |||| |||||||||    
T  18282217 aacaacatattcatcttcttatattaatataacaacaatgtattcatcatcttat-aaaatataacaaca 18282285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 20486903 - 20486971
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  |||||| |||||| ||||||| ||||||||||||||| |||| |||||||||    
T  20486903 aacaacatattcatcatcttataaaaatata-caacaacatattcatcatcttataaaaatataacaaca 20486971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 6170895 - 6170828
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||   |||||||| |||||||  |||||||||||| |||||||| |||||||||||||||    
T  6170895 taatcatataaacaacaacatgttcatcatcttataataatatgacaacaacatattcatcatcttat 6170828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 8467858 - 8467905
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  8467858 acatattcatcatcttataataatataacaacaacatattcatcatct 8467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 16908246 - 16908188
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcac 237  Q
    |||||| ||| ||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  16908246 aacatagcatgatattcacttaataata-ttaatcatatatagaacaatatattcatcac 16908188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 20486971 - 20487041
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    |||||||| |||||||||||||||||||| ||||||||| |   |||||||| ||||||||| |||||||||    
T  20486971 aacataacgtaatattcacttaataataa-taatcatatctaatacaacataatcatcacttaataataata 20487041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 8939661 - 8939739
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||  |||||||||||||||||  ||||||||| ||||  |||||| ||||||||||||||| | |||||||    
T  8939661 taatcatataaagaacaacatattcatcatcttataataacataagaaacaacatattcatcatcttataataacataa 8939739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 14270865 - 14270769
Alignment:
Q  193 tcacttaataataattaatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||| |||||||||    |||||||| ||||||||| |||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  14270865 tcacttaataataat-aatcatatacaacacaacataatcatcacttaataataatataaacaac-acatattcatcatcttataataatataacaaca 14270769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 18301531 - 18301569
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  18301531 aacaacatattcatcattttataataatataacaacaac 18301569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 26291335 - 26291377
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcat 267  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  26291335 acatattcatcattttataataatataacaacaacatattcat 26291377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 9390400 - 9390351
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcat 270  Q
    |||| |||||||||||  ||||||||||||||||||||| ||||||||||    
T  9390400 aacatcatattcatcatcttataataatataacaacaacatattcatcat 9390351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 14270736 - 14270671
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||  |||||||||||| || | || |||||||||    
T  14270736 acatattcatcatcttataataatataacaacaaaatattcatcatctcatcataatataacaaca 14270671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 15112375 - 15112440
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  |||||||||||||| ||||||| |||| |||||||||| | |||||||    
T  15112375 aacaacatattcatcatcttataataatataagcaacaacatattaatcatcttataataacataa 15112440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 15115947 - 15116012
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  |||||||||||||| ||||||| |||| |||||||||| | |||||||    
T  15115947 aacaacatattcatcatcttataataatataagcaacaacatattaatcatcttataataacataa 15116012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 17231747 - 17231838
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttat 275  Q
    ||||||||  ||||||||||||||| |||||||||    |||||||| ||||||||| |||||||||| |||||| || |||||||||||||||    
T  17231747 aacataatcatcacttaataataat-aatcatatacaacacaacataatcatcacttaataataatataaacaac-acatattcatcatcttat 17231838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 290
Target Start/End: Original strand, 8467777 - 8467890
Alignment:
Q  178 aacataacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||| ||||||||  |||||||||||||||  ||||||||||    | |||||| ||||||  ||||||||||| |||||| || |||||||||||||||    
T  8467777 aacacaacataatcatcacttaataataataataatcatatacaacataacatagtcatcatcttataataatacaacaac-acatattcatcatcttat 8467875  T
Q  276 gaaaacataacaaca 290  Q
     | || |||||||||    
T  8467876 aataatataacaaca 8467890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 16998076 - 16998131
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttat 275  Q
    ||||||||| ||||||  |||||||||||||| ||||||| |||||||||||||||    
T  16998076 aacaacataatcatcatcttataataatataagcaacaacatattcatcatcttat 16998131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 18278294 - 18278340
Alignment:
Q  228 tattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||||    
T  18278294 tattcatcatcttataa-aatataacaacaacgtattcatcatcttat 18278340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 18282257 - 18282303
Alignment:
Q  228 tattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||||    
T  18282257 tattcatcatcttataa-aatataacaacaacgtattcatcatcttat 18282303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 6170783 - 6170745
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  6170783 aacaacatattcatcatcttataataatataacaacaac 6170745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 15112362 - 15112396
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||||||||||| |||||||||||||||    
T  15112362 ataataatataacaacaacatattcatcatcttat 15112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 15115934 - 15115968
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||||||||||| |||||||||||||||    
T  15115934 ataataatataacaacaacatattcatcatcttat 15115968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 9752409 - 9752340
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||| |   |||| ||||||||||||||| ||||||||||| ||| | || |||||||||    
T  9752409 aacaacatattcataatcatatagtaatataacaacaacatattcatcatcatataataatataacaaca 9752340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 12705879 - 12705834
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||||||| |||||||| | ||||||||| ||||    
T  12705879 tataataatataacaacaacatattcatctttttatgaaaatataa 12705834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 14270772 - 14270704
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  | || ||||||||||||| || ||||||||||||||| | || |||||||||    
T  14270772 aacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataacaaca 14270704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 16582623 - 16582691
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  16582623 aacaacatattcatcgtcttataataatacaacaac-acatattcatcatcttataataatataacaaca 16582691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17231821 - 17231885
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  17231821 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 17231885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 17231882 - 17231950
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  | || ||||||||||||| || ||||||||||||||| | || |||||||||    
T  17231882 aacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataacaaca 17231950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 17231947 - 17232015
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  | || ||||||||||||| || ||||||||||||||| | || |||||||||    
T  17231947 aacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataacaaca 17232015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 17232012 - 17232080
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  | || ||||||||||||| || ||||||||||||||| | || |||||||||    
T  17232012 aacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataacaaca 17232080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 15719548 - 15719616
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttat 275  Q
    |||| ||||| | ||||||||||| ||||  |||||||||||| ||||||||| || ||||||||||||    
T  15719548 taataatataagcaacaacatatttatcatcttataataatataaacaacaacataatcatcatcttat 15719616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 16323503 - 16323588
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||  ||||||||||||||| |||||||||     ||||||||||||||  | || ||||||||||||| || |||||||||||||||    
T  16323503 aacataatcgtcacttaataataat-aatcatata-----caacatattcatcatctcatcataatataacaac-acatattcatcatcttat 16323588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 9e-61; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 16623083 - 16623205
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16623083 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacatattcat 16623182  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  16623183 catcttatgaaaacataacaaca 16623205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 31479262 - 31479183
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31479262 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcacttaataataa 31479183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 23414037 - 23414115
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  23414037 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 23414115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 11565923 - 11565993
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  11565923 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 11565993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 19869690 - 19869760
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19869690 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 19869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 22948178 - 22948248
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22948178 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 22948248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 22952134 - 22952204
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22952134 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 22952204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 23394129 - 23394199
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  23394129 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 23394199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 23870622 - 23870692
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  23870622 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 23870692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 23874578 - 23874648
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  23874578 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 23874648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 23989021 - 23989091
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  23989021 catcatcaataacataacataatattcacttaataat-attaatcatatattgaacaacatattcatcactt 23989091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 14471354 - 14471424
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcact 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  14471354 catcatcaataacataacataatattcacttaataataattaatcatatatagaacgacataatcatcact 14471424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 8242935 - 8243005
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  8242935 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 8243005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 12619887 - 12619817
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  12619887 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcgtcactt 12619817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 16759298 - 16759368
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||    
T  16759298 catcatcaataacataacataatatttacttaataat-attaatcatatatagaacaacatattcatcactt 16759368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 22075066 - 22074997
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| |||||||    
T  22075066 aacataacataatattcacttaataataattaatcatatatagtaaaacatattcatcacttaataataa 22074997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 1643542 - 1643609
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaa 288  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  1643542 aacaatatattcatctccttatattaatataacaacaacgtattcatcatcttatgaaaatataacaa 1643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 23400974 - 23401028
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23400974 cataatattcacttaataataattaatcatatatagtacaacatattcatcactt 23401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 22074958 - 22074890
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  22074958 aacataacataatattcacttaataataa-taatcatatatagtacaacataatcatcacttaataataa 22074890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 22862017 - 22862077
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22862017 aacataacatgatattcacttaataataat-aatcatatatagaacaacatattcatcactt 22862077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 18918479 - 18918411
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  18918479 aacaacatattcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataacaaca 18918411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 8242749 - 8242813
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  8242749 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 8242813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 11565737 - 11565801
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  11565737 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 11565801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 12620073 - 12620009
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  12620073 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 12620009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22947992 - 22948056
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  22947992 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 22948056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22951948 - 22952012
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  22951948 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 22952012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 23870436 - 23870500
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  23870436 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 23870500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 23874392 - 23874456
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  23874392 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 23874456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 23988835 - 23988899
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  23988835 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 23988899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 1643619 - 1643673
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||| | | ||||||||||||||||    
T  1643619 cataacattcacttaataataattaatcatatatagtaaaacatattcatcactt 1643673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 2076635 - 2076708
Alignment:
Q  178 aacataacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||||  ||||||||| |   |||||||| ||||||||| |||||||||    
T  2076635 aacataacataatattcacttaataataataataatcatatctaatacaacataatcatcacttaataataata 2076708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 18918403 - 18918350
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18918403 cataacattcacttaataataattaatcatatatggtacaaca-attcatcactt 18918350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22075135 - 22075066
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||| |||| ||||  |||||| |||||||||||||| ||||||||||||||| |||| |||||||||    
T  22075135 aacaacntattaatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataacaaca 22075066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22075168 - 22075099
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| ||||||||||||||| |||| |||||||||| |||| |||||||||    
T  22075168 aacaacatattcatcttcttatattaatataacaacaacntattaatcatcttataaaaatataacaaca 22075099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 16623219 - 16623267
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  16623219 attcacttaataataattaatcatatatagtacaacatatccatcactt 16623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 290
Target Start/End: Original strand, 2076519 - 2076635
Alignment:
Q  178 aacataacataatattcacttaataataat--taatc------atatatggaacaacatattcatcactttataataatataacaacaacgtattcatca 269  Q
    ||||||||||||||||||||||||||||||  |||||      |||||| | ||||||||||||||||    | ||  ||||| |||||| |||||||||    
T  2076519 aacataacataatattcacttaataataataataatcatatctatatatagtacaacatattcatcac----tcatcttataataacaacatattcatca 2076614  T
Q  270 tcttatgaaaacataacaaca 290  Q
    |||||| |||| |||||||||    
T  2076615 tcttataaaaatataacaaca 2076635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 15874924 - 15874976
Alignment:
Q  221 aacaacatattcatcactttataataatat-aacaacaacgtattcatcatct 272  Q
    |||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||    
T  15874924 aacaacatattcatcattttataataatataaacgacaacatattcatcatct 15874976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 18913329 - 18913373
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatca 269  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||    
T  18913329 acatattcatcatcttataataatataacaacaacatattcatca 18913373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 2200815 - 2200870
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttat 275  Q
    ||||||||||||||||  ||||||||| |||| ||||||| |||||||||||||||    
T  2200815 aacaacatattcatcatcttataataacataagcaacaacatattcatcatcttat 2200870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 23400889 - 23400976
Alignment:
Q  178 aacataacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||  |||| ||||||   ||| ||| ||| |||   |||||||||||||||||||| |||||||    
T  23400889 aacataacataatattcacttaataataataataattatatat---acatcat-ttcgtcataatataataatataacaacaacatattcat 23400976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 207
Target Start/End: Original strand, 1643471 - 1643500
Alignment:
Q  178 aacataacataatattcacttaataataat 207  Q
    ||||||||||||||||||||||||||||||    
T  1643471 aacataacataatattcacttaataataat 1643500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 18913297 - 18913361
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  18913297 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 18913361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 31630953 - 31630888
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||| ||||  |||||||||||| || | || |||||||||    
T  31630953 acatattcatcatcttataataatataacgacaatatattcatcatctcatcataatataacaaca 31630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 18913220 - 18913314
Alignment:
Q  183 aacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttat 275  Q
    ||||||||  |||||||||||||||  ||||||||||    |||||||| |||||||||  ||||||||| |||||| || |||||||||||||||    
T  18913220 aacataatcatcacttaataataataataatcatatacaacacaacataatcatcacttactaataatataaacaac-acatattcatcatcttat 18913314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 18953236 - 18953192
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacata 229  Q
    ||||| ||||||||||||| |||||||||||||| | ||||||||    
T  18953236 cataacattcacttaataacaattaatcatatatagtacaacata 18953192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 15223841 - 15223963
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  15223841 catcatcaataacataacataatattcacttaataataattaatcatatatagtacaacatattcatcactttataataatataacaacaacgtattcat 15223940  T
Q  268 catcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||    
T  15223941 catcttatgaaaacataacaaca 15223963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 9555591 - 9555661
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  9555591 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 9555661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 14758471 - 14758401
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14758471 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 14758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 14955236 - 14955166
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14955236 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 14955166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 25688964 - 25689034
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  25688964 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 25689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 20158267 - 20158198
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  20158267 aacataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 20158198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 20160943 - 20160874
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  20160943 aacataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 20160874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 20163721 - 20163652
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  20163721 aacataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 20163652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 12486746 - 12486813
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatca 236  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  12486746 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatca 12486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 4562330 - 4562260
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4562330 catcatcaataacataacatgatattcacttaataat-attaatcatatatagaacaacatattcatcactt 4562260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 5757855 - 5757785
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  5757855 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 5757785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 33741361 - 33741431
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  33741361 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcgtcactt 33741431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 10712012 - 10712080
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||    
T  10712012 acataacataatattcacttaataataattaatcatatatagtgcaacatattcatcacttaataataa 10712080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 10925782 - 10925850
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||    
T  10925782 acataacataatattcacttaataataattaatcatatatagtgcaacatattcatcacttaataataa 10925850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 15189760 - 15189829
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  15189760 aacaacatattcatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 15189829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 20158159 - 20158091
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  20158159 aacataacataatattcacttaataataa-taatcatatatagtacaacataatcatcacttaataataa 20158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 15189714 - 15189796
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||   |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  15189714 taatcatataaacaacaacttattcatcatcttataataatataacaacaacatattcatcatcttataataatataacaaca 15189796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 27533008 - 27533062
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  27533008 cataacattcacttaataataattaatcatatatagtacaacatattcatcactt 27533062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 20160835 - 20160767
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||| |||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  20160835 aacataacataatattcactgaataataa-taatcatatatagtacaacataatcatcacttaataataa 20160767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 20163613 - 20163545
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||| |||| |||||||    
T  20163613 aacataacataatattcacttaataataa-taatcatatatagtacaacataatcatgacttaataataa 20163545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 27532932 - 27533000
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  27532932 aacaacatattcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataacaaca 27533000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 4562516 - 4562452
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  4562516 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 4562452  T

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Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 9555405 - 9555469
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  9555405 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 9555469  T

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Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 14758657 - 14758593
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  14758657 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 14758593  T

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Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 14955422 - 14955358
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  14955422 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 14955358  T

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Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 25688778 - 25688842
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  25688778 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 25688842  T

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Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 33741175 - 33741239
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  33741175 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 33741239  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 631646 - 631592
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||| ||||    
T  631646 aacaacatattcatctttttataataatataacaacaacatattcatcattttat 631592  T

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Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 15482045 - 15481980
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  15482045 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 15481980  T

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Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 17807243 - 17807299
Alignment:
Q  182 taacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  17807243 taacatgatattcacttaataataat-aataatatatagaacaacatattcatcactt 17807299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 19857001 - 19857066
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  19857001 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 19857066  T

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Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 5758041 - 5757977
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || ||||||||||||||| |||||||||||||||||||| ||||    
T  5758041 aacaacatattcatcttcttgtattaatataacaacaacatattcatcatcttatgaaaatataa 5757977  T

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Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 12423211 - 12423281
Alignment:
Q  221 aacaacatattcatcactttataataatat---aacaacaacgtattcatcatcttatgaaaacataacaa 288  Q
    |||||||||||||||| |||||||||||||   ||||||||| ||||||||||||||| || | |||||||    
T  12423211 aacaacatattcatcattttataataatataacaacaacaacatattcatcatcttataaatatataacaa 12423281  T

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Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 23996813 - 23996762
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||||||| ||||||||||||||||||||   |||||||||||||||    
T  23996813 aacaacatattcatcattttataataatataacaaca---tattcatcatcttat 23996762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 361543 - 361608
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  |||||||||||||||| |||| |||||||||||| || | || |||||||||    
T  361543 acatattcatcatcttataataatataacagcaacatattcatcatctcatcataatataacaaca 361608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 15481980 - 15481915
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||| ||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  15481980 acatatttatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 15481915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 12423196 - 12423247
Alignment:
Q  239 ttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||||||| |||||||||| |||| | || |||||||||    
T  12423196 ttataataatataacaacaacatattcatcattttataataatataacaaca 12423247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 15098691 - 15098737
Alignment:
Q  223 caacatattcatcactttataataatataacaacaacgtattcatca 269  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||||    
T  15098691 caacatattcatcatcttataataatataacaacaacataatcatca 15098737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 15189793 - 15189831
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  15189793 aacaacatattcatcatcttataataatataacaacaac 15189831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 17049005 - 17048967
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  17049005 aacaacatgttcatcattttataataatataacaacaac 17048967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 6190069 - 6190134
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||| |||||  ||||||||||| || | || |||||||||    
T  6190069 acatattcatcatcttataataatataaccacaacacattcatcatctcatcataatataacaaca 6190134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 15482077 - 15482013
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  15482077 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 15482013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 22634841 - 22634792
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||||| ||||||||||| ||| | || |||||||||    
T  22634841 ataataatataacaacaacatattcatcatcatataataatataacaaca 22634792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 17049037 - 17048969
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||  |||||  ||||||||||||||||||||| | |||||||| |||| | || |||||||||    
T  17049037 acaacataaacatcatcttataataatataacaacaacatgttcatcattttataataatataacaaca 17048969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 19856895 - 19856986
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||  |||||||||||||| || |||||||    |||||||| ||||||||| ||||||||||||  |  || |||||||||||||||    
T  19856895 aacataatcatcacttaataataaata-tcatatacaacacaacataatcatcacttaataataatataaacaatacatattcatcatcttat 19856986  T

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Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 15237977 - 15237854
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatga 277  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||  |  ||||||||||||||||||||||||    
T  15237977 aacataacataatattcacttaataataattaatcatatatgtaacaacatgttcatcactttataataattaagtaacaacgtattcatcatcttatga 15237878  T
Q  278 aaacata---acaacatattcata 298  Q
    |||||||   ||||||||||||||    
T  15237877 aaacataacgacaacatattcata 15237854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 15237851 - 15237752
Alignment:
Q  191 attcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||    
T  15237851 attcacttaataataattaatcatatatggaacaacatgttcatcactttataataattaagtaacaacgtattcatcatcttatgaaaacataacaaca 15237752  T

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Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 10752096 - 10752175
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10752096 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcacttaataataa 10752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 18355335 - 18355414
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18355335 catcatcaataacataacataatattcacttaataataattaatcatatatagaacaacatattcatcacttaataataa 18355414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 40724581 - 40724510
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40724581 catcatcaataacataacataatattcacttaataataattaatcatatatagaacaacatattcatcactt 40724510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 19473729 - 19473659
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19473729 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 19473659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 20294962 - 20295032
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20294962 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 20295032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 20911909 - 20911836
Alignment:
Q  174 caataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  20911909 caataacataacataatattcacttaataataattaatcatatatagtacaacataatcatcacttaataataa 20911836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22108254 - 22108185
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  22108254 aacaacatattcatcattttataataatataacaacaacatattcatcatcttataaaaatataacaaca 22108185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22120399 - 22120330
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||| |||||||||    
T  22120399 aacaacatattcatcattttataataatataacaacaacatattcatcatcttatagaaatataacaaca 22120330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 24768232 - 24768164
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  24768232 aacataacataatat-cacttaataataattaatcatatatagtacaacataatcatcacttaataataa 24768164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 5889873 - 5889804
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  ||||||||||||||||||| | ||||||||||||||| | || |||||||||    
T  5889873 aacaacatattcatcatcttataataatataacaacatcatattcatcatcttataataatataacaaca 5889804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 18355045 - 18355113
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  18355045 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataacaaca 18355113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 19473915 - 19473851
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  19473915 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 19473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 20294776 - 20294840
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  20294776 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 20294840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 24768300 - 24768246
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||||||   ||||| |||||||||||||||||||||||||||||||    
T  24768300 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttat 24768246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 18355146 - 18355213
Alignment:
Q  221 aacaacatattcatcactttataataatat---aacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||| |||||||||||||   ||||||||| ||||||||||||||| |||| ||||    
T  18355146 aacaacatattcatcattttataataatataaaaacaacaacatattcatcatcttataaaaatataa 18355213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22108221 - 22108152
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  |||||| |||||||||||||| |||||||||| |||| | || |||||||||    
T  22108221 aacaacatattcatcatcttataaaaatataacaacaacatattcatcattttataataatataacaaca 22108152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 22120333 - 22120284
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcat 270  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  22120333 aacaacatactcatcattttataataatataacaacaacatattcatcat 22120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 5889909 - 5889836
Alignment:
Q  221 aacaacatattcatcactttataataatataacaa---caacgtattcatcatcttatgaaaacataacaacat 291  Q
    ||||||||||||||||  |||||||||||||||||   |||| ||||||||||||||| | || ||||||||||    
T  5889909 aacaacatattcatcatcttataataatataacaacaacaacatattcatcatcttataataatataacaacat 5889836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 275
Target Start/End: Complemental strand, 20912214 - 20912133
Alignment:
Q  193 tcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||||||| ||||||||||    |||||||  |||||  ||||||||||||||||||||| |||||||| ||||||    
T  20912214 tcacttaataataat-aatcatatataccgcaacataaacatcatcttataataatataacaacaacatattcatcttcttat 20912133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 22108188 - 22108150
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22108188 aacaacatattcatcattttataataatataacaacaac 22108150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 5889922 - 5889873
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  5889922 ataataatataacaacaacatattcatcatcttataataatataacaaca 5889873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 11226427 - 11226472
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||    
T  11226427 tataataatataacaacaacatattcatcatcttatcaaaatataa 11226472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 21742289 - 21742238
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||   ||||||||||||||||  |||||||||||||||||||||    
T  21742289 taatcatataaacaacaacatattcatcatcttataataatataacaacaac 21742238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 21742323 - 21742240
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||   ||||||||||||||||  | ||||| |||||| ||||||| ||||||||||||||| | || |||||||||    
T  21742323 taatcatatagacaacaacatattcatcatctcataatcatataaacaacaacatattcatcatcttataataatataacaaca 21742240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 29447377 - 29447447
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    |||| ||||||||  ||||||||||||| |||||||||||  | |||||||| ||||||||| |||||||||    
T  29447377 aacacaacataatcatcacttaataata-ttaatcatatacagcacaacataatcatcacttaataataata 29447447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 22120366 - 22120297
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  |||||  |||||||||||||| || ||||||| |||| | || |||||||||    
T  22120366 aacaacatattcatcatcttatagaaatataacaacaacatactcatcattttataataatataacaaca 22120297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 207
Target Start/End: Complemental strand, 40727259 - 40727230
Alignment:
Q  178 aacataacataatattcacttaataataat 207  Q
    ||||||||||||||||||||||||||||||    
T  40727259 aacataacataatattcacttaataataat 40727230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 40727199 - 40727171
Alignment:
Q  240 tataataatataacaacaacgtattcatc 268  Q
    |||||||||||||||||||||||||||||    
T  40727199 tataataatataacaacaacgtattcatc 40727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 15165 - 15087
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  15165 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 15087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 21829021 - 21828943
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  21829021 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 21828943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 30941155 - 30941077
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  30941155 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 30941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 21977677 - 21977607
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  21977677 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 21977607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 21410088 - 21410156
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  21410088 acataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 21410156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 21804580 - 21804648
Alignment:
Q  179 acataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  21804580 acataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 21804648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 22111112 - 22111182
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  22111112 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 22111182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 43250872 - 43250942
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  43250872 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 43250942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 21386407 - 21386476
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  21386407 aacataacataacattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 21386476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 21386515 - 21386576
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21386515 aacataacataatattcacttaataataattaatcatatatagtacaacatattcatcactt 21386576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 21973582 - 21973516
Alignment:
Q  172 atcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  21973582 atcaataacataacataatattcacttaataat-attaatcatatatagaacaacatatttatcactt 21973516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 14398839 - 14398770
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||| |||||||    
T  14398839 aacataacataatattcacttaataataattaatcatatatattacaacatattcattacttaataataa 14398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 18863680 - 18863623
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaac 226  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  18863680 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaac 18863623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 15924284 - 15924230
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15924284 cataacattcacttaataataattaatcatatatagtacaacatattcatcactt 15924230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 15924343 - 15924294
Alignment:
Q  239 ttataataatataacaacaacgtattcatcatcttatgaaaacataacaa 288  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  15924343 ttatattaatataacaacaacgtattcatcatcttatgaaaatataacaa 15924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 38550687 - 38550622
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || |||| |||||||||    
T  38550687 acatattcatcatcttataataatataacaacaacatattcatcatctcatcaaaatataacaaca 38550622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 22110926 - 22110990
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  22110926 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 22110990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 43250686 - 43250750
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  43250686 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 43250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 1323957 - 1323859
Alignment:
Q  176 ataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||| ||||||||||| |||||||||||||| ||||||||||    |||||||| ||||||||| ||||||||||||  |  || |||||||||||||||    
T  1323957 ataatataacataataatcacttaataataa-taatcatatacaacacaacataatcatcacttaataataatataaacaatacatattcatcatcttat 1323859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 5610380 - 5610331
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatc 271  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  5610380 acaacataatcatcacttaataataatataacaacaacatattcatcatc 5610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 20983539 - 20983487
Alignment:
Q  223 caacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  20983539 caacatattcctcatcttataataatataacaacaacatattcatcatcttat 20983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 20983573 - 20983505
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||  |||||||||||||||| |||| ||||| ||||||||| | || |||||||||    
T  20983573 acaacatattcatcatcttataataatataacatcaacatattcctcatcttataataatataacaaca 20983505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 21973772 - 21973708
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||| ||||||||||||||||||||| ||||    
T  21973772 aacaacatattcatcttcttgtattaatataacaacaaggtattcatcatcttatgaaaatataa 21973708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 21977839 - 21977799
Alignment:
Q  245 taatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  21977839 taatataacaacaacgtattcatcatcttatgaaaatataa 21977799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 38550752 - 38550705
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  38550752 acatattcatcatcttataataatataacaacaacatattcatcatct 38550705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 14398889 - 14398839
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||| |||||||| |||||| |||| |||||||||    
T  14398889 tataataatataacaacaacatattcatcttcttataaaaatataacaaca 14398839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 20983607 - 20983553
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    ||||||||||| ||||  ||||||||||||||| ||||| |||||||||||||||    
T  20983607 aacaacatatttatcatcttataataatataaccacaacatattcatcatcttat 20983553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 1323779 - 1323734
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcat 270  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||    
T  1323779 acatattcatcatcttataataatataacaacaacatattcatcat 1323734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 13428744 - 13428679
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||| ||||||| |||||||||||| || | || |||||||||    
T  13428744 acatattcatcatcttataataatatagcaacaacatattcatcatctcatcataatataacaaca 13428679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 23913437 - 23913507
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    |||||||||||||||| |||||||||||| ||||||||| |   |||||||| |||||| || |||||||||    
T  23913437 aacataacataatattaacttaataataa-taatcatatctaatacaacataatcatcatttaataataata 23913507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 13428776 - 13428727
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||| |||||||||||| |||||| || |||||||||||||||    
T  13428776 acatattcatcattttataataatacaacaac-acatattcatcatcttat 13428727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 16402323 - 16402245
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||  |||||||||||||||||  ||||||||| ||||  |||||| |||||| |||||||| | |||||||    
T  16402323 taatcatataaagaacaacatattcatcatcttataataacataagaaacaacatattcagcatcttataataacataa 16402245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 1323844 - 1323779
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||| |||||||  ||||||||||| || | || |||||||||    
T  1323844 acatattcatcatcttataataatatagcaacaacaaattcatcatctcatcataatataacaaca 1323779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 23913389 - 23913437
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||| ||||||| ||||||||||||||| |||| |||||||||    
T  23913389 ataataatatatcaacaac-tattcatcatcttataaaaatataacaaca 23913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 38550784 - 38550720
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  38550784 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 38550720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 1282512 - 1282590
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  1282512 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 1282590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 41532018 - 41531940
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  41532018 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcacttaataataa 41531940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 10102853 - 10102783
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10102853 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 10102783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 24629524 - 24629454
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24629524 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 24629454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 24648416 - 24648486
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24648416 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 24648486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 30346060 - 30345990
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  30346060 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 30345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 27380397 - 27380328
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcact 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27380397 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcact 27380328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 27384443 - 27384374
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcact 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27384443 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcact 27384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 27600893 - 27600963
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  27600893 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 27600963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 31344279 - 31344346
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataat 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  31344279 aacataacataatattcacttaataataattaatcatatatggtacaacataatcatcacttaataat 31344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 12902420 - 12902360
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  12902420 aacatagcatgatattcacttaataata-ttaatcatatatagaacaacatattcatcactt 12902360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 10103039 - 10102975
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  10103039 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 10102975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 24629710 - 24629646
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  24629710 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 24629646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 27600707 - 27600771
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  27600707 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 27600771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 30346246 - 30346182
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  30346246 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 30346182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 27384629 - 27384565
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || ||||||||| |||||||||||||||||||||||||| ||||    
T  27384629 aacaacatattcatcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataa 27384565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 31344211 - 31344279
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   || || ||||||||||| ||||||||||||||||||| |||| |||||||||    
T  31344211 aacaacatattcatcttcttgtattaatataacaataacgtattcatcatcttat-aaaatataacaaca 31344279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 27380583 - 27380519
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||| |||   || || ||||||||| |||||||||||||||||||||||||| ||||    
T  27380583 aacaacatatttatcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataa 27380519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 9784216 - 9784253
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatat 216  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  9784216 aacataacataatattcacttaataataa-taatcatat 9784253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 24648249 - 24648294
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||||||| |||||||| | ||||||||| ||||    
T  24648249 tataataatataacaacaacatattcatctttttatgaaaatataa 24648294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 9784185 - 9784233
Alignment:
Q  248 tataacaacaacgtattcatcatcttatgaaaacataacaacatattca 296  Q
    |||||||||||| ||||||||||||||| | |||||||||  |||||||    
T  9784185 tataacaacaacatattcatcatcttataacaacataacataatattca 9784233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 4903 - 4833
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4903 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatcactt 4833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 5089 - 5025
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||  ||| || ||||||||||||||| |||||||||||||||||||||||||    
T  5089 aacaacatattcatctttttgtattaatataacaacaacatattcatcatcttatgaaaacataa 5025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 11996 - 12065
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  11996 aacataacataatattcacttaataataattaatcatatatagtacaacatattcatcacttaataataa 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 12104 - 12172
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  12104 aacataacataatattcacttaataataa-taatcatatatagtacaacataatcatcacttaataataa 12172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 33731 - 33664
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatca 236  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  33731 catcatcaataacataacataatattcacttaataat-attaatcatatatagaacaacatattcatca 33664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 11563 - 11633
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  11563 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 11392 - 11456
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||| ||||    
T  11392 aacaacatattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataa 11456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 68225 - 68155
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  68225 catcatcaataacataacataatattcatttaataat-attaatcatatatagaacaacatattcatcactt 68155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 68392 - 68347
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||    
T  68392 tataataatataacaacaacatattcatcatcttatgaaaatataa 68347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 8944 - 9013
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  8944 aacataacataatattcacttaataataattaatcatatatagtacaacataatcatcacttaataataa 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 8875 - 8944
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||  |||||| ||||||||||| |||||||||||||| |||| |||| |||||||||    
T  8875 aacaacatattcatctttttatattaatataacaaaaacgtattcatcattttataaaaatataacaaca 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 6064 - 5994
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  6064 catcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaacatattcctcactt 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 6232 - 6186
Alignment:
Q  239 ttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  6232 ttatattaatataacaacaacgtattcatcatcttatgaaaatataa 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 9e-21; HSPs: 9)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 79634 - 79704
Alignment:
Q  168 catcatcaataacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  79634 catcatcaataacataacacaatattcacttaataat-attaatcatatataaaacaacatattcatcactt 79704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 66471 - 66417
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  66471 cataacattcacttaataatagttaatcatatatagtacaacatattcatcactt 66417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 62631 - 62563
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| || ||||||||||||||||||| ||||||||||||| |||||||||    
T  62631 aacaacatattcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataacaaca 62563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 66547 - 66479
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| || ||||||||||||||||||| ||||||||||||| |||||||||    
T  66547 aacaacatattcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataacaaca 66479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 79418 - 79486
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| |||||||||||||| |||||||||||||||| |||| |||||||||    
T  79418 aacaacatattcatcttcttatattaatataacaacaatgtattcatcatcttat-aaaatataacaaca 79486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 62555 - 62501
Alignment:
Q  185 cataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||||||| ||||    
T  62555 cataacattcacttaataatagttaatcatatatagtacaacatattcatgactt 62501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 62708 - 62675
Alignment:
Q  174 caataacataacataatattcacttaataataat 207  Q
    ||||||||||||||||||||||||||||||||||    
T  62708 caataacataacataatattcacttaataataat 62675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 79458 - 79503
Alignment:
Q  228 tattcatcactttataataatataacaacaacgtattcatcatctta 274  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||    
T  79458 tattcatcatcttataa-aatataacaacaacgtattcatcatctta 79503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 207
Target Start/End: Complemental strand, 66620 - 66591
Alignment:
Q  178 aacataacataatattcacttaataataat 207  Q
    ||||||||||||||||||||||||||||||    
T  66620 aacataacataatattcacttaataataat 66591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 8611 - 8542
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  8611 aacaatatattcatcattttataataatataacaacaacatattcatcatcttataataatataacaaca 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 8677 - 8608
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  || |||||||||||||||||| ||||||||||||||| | || |||||||||    
T  8677 aacaacatattcatcatcttctaataatataacaacaacatattcatcatcttataataatataacaaca 8608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 8644 - 8575
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  ||||||||||||||||||||  |||||||||| |||| | || |||||||||    
T  8644 aacaacatattcatcatcttataataatataacaacaatatattcatcattttataataatataacaaca 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 8578 - 8540
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  8578 aacaacatattcatcatcttataataatataacaacaac 8540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 19118 - 19187
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  19118 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttataaaaatataacaaca 19187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 19222 - 19291
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| |||| |||||||||||||||||||||||||| |||| |||||||||    
T  19222 aacaacatattcatcttcttatattaatctaacaacaacgtattcatcatcttataaaaatataacaaca 19291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 207
Target Start/End: Original strand, 19291 - 19320
Alignment:
Q  178 aacataacataatattcacttaataataat 207  Q
    ||||||||||||||||||||||||||||||    
T  19291 aacataacataatattcacttaataataat 19320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 21220 - 21151
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  |||||| |||||||||||||| ||||||||||||||| |||| |||||||||    
T  21220 aacaacatattcatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataacaaca 21151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 21151 - 21078
Alignment:
Q  178 aacataacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||||  ||||||||| |   |||||||| ||||||||| |||||||||    
T  21151 aacataacataatattcacttaataataataataatcatatctaatacaacataatcatcacttaataataata 21078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 11051 - 11120
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  11051 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttataaaaatataacaaca 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 11084 - 11153
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||| |||||||||  |||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  11084 aacaacgtattcatcatcttataaaaatataacaacaatgtattcatcatcttatgaaaatataacaaca 11153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 10729 - 10661
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataa 247  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  10729 aacataacataatat-cacttaataataattaatcatatatagtacaacataatcatcacttaataataa 10661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 10797 - 10743
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||||||   ||||| |||||||||||||||||||||||||||||||    
T  10797 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttat 10743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 945 - 1009
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  945 aacaacatattcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 832 - 870
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  832 aacaacatattcatcattttataataatataacaacaac 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 577 - 526
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacata 229  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  577 aacataacataatattcacttaataataattaatcatatatagtacaacata 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 505 - 401
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaaca 282  Q
    |||||||| |||||||||||||||| ||| |||||    ||||||||  |||||  |||||| |||||||| ||||| ||||||||||||||| |||| |    
T  505 aacataatcttcacttaataataat-aattatatacatcacaacataaacatcatcttataaaaatataaccacaacatattcatcatcttataaaaata 407  T
Q  283 taacaa 288  Q
    ||||||    
T  406 taacaa 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 6831 - 6761
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||| ||||||||| |   |||||||| ||||||||| |||||||||    
T  6831 aacataacataatattcacttaataataa-taatcatatctaatacaacataatcatcacttaataataata 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 6898 - 6831
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||| ||| ||||||  ||||||||||||| ||||||| ||||||||||||||| |||| |||||||||    
T  6898 acaatataatcatcatcttataataatatatcaacaac-tattcatcatcttataaaaatataacaaca 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 37051 - 36981
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataata 249  Q
    ||||||||||||||||||||||||||||| ||||||||| |   |||||||| ||||||||| |||||||||    
T  37051 aacataacataatattcacttaataataa-taatcatatctaatacaacataatcatcacttaataataata 36981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 37117 - 37051
Alignment:
Q  223 caacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||||||||||||| |||| |||||||||    
T  37117 caacatattcatcatcttataaaaatata-caacaacatattcatcatcttataaaaatataacaaca 37051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 6029 - 6079
Alignment:
Q  240 tataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  6029 tataataatataacaacaacatattcatcttcttatgaaaatataacaaca 6079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 6043 - 6112
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||   |||| | |||||||||||||| |||||||| ||||||||||| |||||||||    
T  6043 aacaacatattcatcttcttatgaaaatataacaacaacatattcatcttcttatgaaaatataacaaca 6112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 22249 - 22148
Alignment:
Q  184 acataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaaca 282  Q
    |||||||  ||||||||||||||| |||||||||  | |||||||| ||||||||| ||||||| |||| ||||||| || |||||||||||| | ||||    
T  22249 acataatcatcacttaataataat-aatcatatacagcacaacataatcatcacttcataataacataaacaacaacataatcatcatcttataataaca 22151  T
Q  283 taa 285  Q
    |||    
T  22150 taa 22148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 74142 - 74072
Alignment:
Q  221 aacaacatattcatcactttat-aataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||  ||| |||||||||    
T  74142 aacaacatattcatcatttttttaataatataacaacaacatattcatcatcttatagaaatataacaaca 74072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 6957 - 7022
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  6957 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 7022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 7022 - 7087
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| ||||||||| |||||||||||| || | || |||||||||    
T  7022 acatattcatcatcttataataatacaacaacaacatattcatcatctcatcataatataacaaca 7087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 6925 - 6989
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  6925 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 6989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 44486 - 44421
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  44486 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 44421  T

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Target: scaffold0116; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 44551 - 44486
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || | || |||||||||    
T  44551 acatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataacaaca 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 44657 - 44566
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttat 275  Q
    ||||||||  ||||||||||||||| |||||||||    |||||||| ||||||||| |||||||||| |||||| || |||||||||||||||    
T  44657 aacataatcatcacttaataataat-aatcatatacaacacaacataatcatcacttaataataatataaacaac-acatattcatcatcttat 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 44522 - 44454
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||||||  | || ||||||||||||| || ||||||||||||||| | || |||||||||    
T  44522 aacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataacaaca 44454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 44583 - 44519
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  44583 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 44519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 59910 - 59850
Alignment:
Q  178 aacataacataatattcacttaataataattaatcatatatggaacaacatattcatcactt 239  Q
    |||||| ||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  59910 aacatagcatgatattcacttaataataat-aataatatatagaacaacatattcatcactt 59850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 9066 - 9113
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  9066 acatattcatcatcttataataatataacaacaacatattcatcatct 9113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 9034 - 9098
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  9034 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 9098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 24 - 78
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttat 275  Q
    |||||||||||||||| ||||||||||||||| |||||| | |||||||| ||||    
T  24 aacaacatattcatcattttataataatataataacaacatgttcatcattttat 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 8550 - 8504
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcat 267  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||||    
T  8550 aacaacatactcatcattttataataatataacaacaacatattcat 8504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 8505 - 8461
Alignment:
Q  241 ataataatataacaacaacgtattcatcatcttatgaaaacataa 285  Q
    |||| |||||||||||||| ||||||||||||||| |||| ||||    
T  8505 ataaaaatataacaacaacatattcatcatcttataaaaatataa 8461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 25469 - 25419
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatc 271  Q
    ||||||||||||||||   |||||||||||||||||||| |||||||||||    
T  25469 aacaacatattcatcatcatataataatataacaacaacatattcatcatc 25419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 25501 - 25433
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||  |||||  ||||| ||||||||||||||| ||||||||||| ||| | || |||||||||    
T  25501 acaacataaacatcatcttatagtaatataacaacaacatattcatcatcatataataatataacaaca 25433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 36988 - 36942
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacata 229  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  36988 aacataacattcacttaataataattaatcatatatagtacaacata 36942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 37101 - 37063
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaac 259  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  37101 aacaacatagtcatcattttataataatataacaacaac 37063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 2908 - 2977
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||| ||||||| |||||||||||||||||||||| | || ||||| |||| | || |||||||||    
T  2908 aacaacatgttcatcattttataataatataacaacaacatgtttatcattttatcataatataacaaca 2977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 6971 - 7040
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||| ||||||| |||||||||||||||||||||| | || ||||| |||| | || |||||||||    
T  6971 aacaacatgttcatcattttataataatataacaacaacatgtttatcattttatcataatataacaaca 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 2876 - 2944
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||  |||||  ||||||||||||||||||||| | |||||||| |||| | || |||||||||    
T  2876 acaacataaacatcatcttataataatataacaacaacatgttcatcattttataataatataacaaca 2944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 6939 - 7007
Alignment:
Q  222 acaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||  |||||  ||||||||||||||||||||| | |||||||| |||| | || |||||||||    
T  6939 acaacataaacatcatcttataataatataacaacaacatgttcatcattttataataatataacaaca 7007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 361945 - 362036
Alignment:
Q  183 aacataatattcacttaataataattaatcatatatggaacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttat 275  Q
    ||||||||  ||||||||||||||| |||||||||    |||||||| ||||||||| |||||||||| |||||| || |||||||||||||||    
T  361945 aacataatcatcacttaataataat-aatcatatacaacacaacataatcatcacttaataataatataaacaac-acatattcatcatcttat 362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 362051 - 362096
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcat 270  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||    
T  362051 acatattcatcatcttataataatataacaacaacatattcatcat 362096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 362214 - 362261
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    ||||||| ||||  ||||||||||||||||||||| ||||||||||||    
T  362214 acatatttatcatcttataataatataacaacaacatattcatcatct 362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 362019 - 362083
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||||||||||  ||||||||||| |||||| || ||||||||||||||| | || |||||||||    
T  362019 acatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataacaaca 362083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 362080 - 362148
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    |||||||||||||||| || || ||||||||||||| || |||| |||||||||  | ||||||||||||    
T  362080 aacaacatattcatcatttcatcataatataacaac-acatatttatcatcttagaataacataacaaca 362148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 362145 - 362214
Alignment:
Q  221 aacaacatattcatcactttataataatataacaacaacgtattcatcatcttatgaaaacataacaaca 290  Q
    ||||| ||||||||||  | || |||||||||||||||| |||||||||||| || | || |||||||||    
T  362145 aacaaaatattcatcatctcatcataatataacaacaacatattcatcatctcataataatataacaaca 362214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 79931 - 79884
Alignment:
Q  225 acatattcatcactttataataatataacaacaacgtattcatcatct 272  Q
    ||||||||||||  ||||||||||||||||| ||| ||||||||||||    
T  79931 acatattcatcatcttataataatataacaataacatattcatcatct 79884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 6523 - 6445
Alignment:
Q  208 taatcatatatggaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||  |||||||||||||||||  ||||||||| ||||  || ||| ||||||||||||||| | |||||||    
T  6523 taatcatataaagaacaacatattcatcatcttataataacataagaaataacatattcatcatcttataataacataa 6445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 10110 - 10175
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  ||||||||| |||| ||||||  ||||||||||||||| | |||||||    
T  10110 aacaacatattcatcatcttataataacataagcaacaatatattcatcatcttataataacataa 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 15 - 80
Alignment:
Q  221 aacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||||||||||  |||||||||||| ||||||||| || ||||||||| || | |||||||    
T  15 aacaacatattcatcatcttataataatataaacaacaacataatcatcatctcataataacataa 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 26889 - 26824
Alignment:
Q  221 aacaacatattcatcactttataataatat-aacaacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||| ||||||  |||||||||||| ||||||||| || |||||||||||| | |||||||    
T  26889 aacaacataatcatcatcttataataatataaacaacaacataatcatcatcttataataacataa 26824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 170460 - 170395
Alignment:
Q  221 aacaacatattcatcactttataataatataa-caacaacgtattcatcatcttatgaaaacataa 285  Q
    ||||||||| ||||||  ||||||||| |||| ||||||| ||||||||||||||| |||| ||||    
T  170460 aacaacataatcatcatcttataataacataagcaacaacatattcatcatcttataaaaatataa 170395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 7752 - 7804
Alignment:
Q  221 aacaacatattcatcactttataataatat-aacaacaacgtattcatcatct 272  Q
    ||||||||||||||||  |||||||||||| ||||||||| || |||||||||    
T  7752 aacaacatattcatcatcttataataatataaacaacaacataatcatcatct 7804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 22364 - 22293
Alignment:
Q  183 aacataatattcacttaataataat--taatcatatatggaacaacatattcatcactttataataatataa 252  Q
    ||||||||  |||||||||||||||  ||||||||||    |||||||| ||||||||| ||||||||||||    
T  22364 aacataatcatcacttaataataataataatcatatacaacacaacataatcatcacttaataataatataa 22293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 75855 - 75911
Alignment:
Q  220 gaacaacatattcatcactttataataatataa-caacaacgtattcatcatcttat 275  Q
    |||||||||| ||||||  ||||||||| |||| ||||||| |||||||||||||||    
T  75855 gaacaacataatcatcatcttataataacataagcaacaacatattcatcatcttat 75911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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