View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0767_low_59 (Length: 228)
Name: NF0767_low_59
Description: NF0767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0767_low_59 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 43109283 - 43109510
Alignment:
| Q |
1 |
cttggagtctcttgatctattctattcaaaattattttccctgagcttagtaaattcccttcacagcttctaagagttgttacaaactccattccgtggt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
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| T |
43109283 |
cttggagtctcttgatctattctattcaaaattattttccctgagcttagtaaattcccttcacagcttctaagagttgttacaagctccattccatggt |
43109382 |
T |
|
| Q |
101 |
aggactcaagaggaggtacccgggatccgcaatcagaggagcgagatagagttcggtccatcatcataggcttttgagaagtgcaatcagcatagtctga |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43109383 |
aggactcaaggggaggtacccgggatccgcaatcagaggagcgagatagagttcggtccatcatcataggcttttgagaagtgcaatcagcatagtctga |
43109482 |
T |
|
| Q |
201 |
ttcacatccatgttcatcgaatgataat |
228 |
Q |
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||||||||| ||||||||| |||||||| |
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| T |
43109483 |
ttcacatccttgttcatcggatgataat |
43109510 |
T |
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