View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0767_low_61 (Length: 206)

Name: NF0767_low_61
Description: NF0767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0767_low_61
NF0767_low_61
[»] chr1 (24 HSPs)
chr1 (1-162)||(43571025-43571186)
chr1 (1-163)||(5489775-5489937)
chr1 (1-163)||(48498901-48499063)
chr1 (1-162)||(37814778-37814939)
chr1 (1-164)||(750244-750407)
chr1 (1-160)||(7447828-7447986)
chr1 (1-163)||(24769438-24769600)
chr1 (1-160)||(4401329-4401489)
chr1 (1-163)||(23989462-23989625)
chr1 (1-162)||(50448199-50448360)
chr1 (1-160)||(2497501-2497660)
chr1 (9-120)||(4888085-4888196)
chr1 (63-163)||(44112676-44112776)
chr1 (63-162)||(38335918-38336017)
chr1 (63-162)||(48119628-48119727)
chr1 (63-162)||(35003294-35003393)
chr1 (63-164)||(41065151-41065252)
chr1 (63-164)||(45427746-45427847)
chr1 (69-164)||(38113202-38113297)
chr1 (63-162)||(46168383-46168482)
chr1 (63-164)||(45705823-45705924)
chr1 (63-163)||(45639733-45639833)
chr1 (63-162)||(35000114-35000213)
chr1 (105-163)||(14427346-14427404)
[»] chr3 (28 HSPs)
chr3 (1-163)||(46941052-46941214)
chr3 (1-163)||(47190965-47191126)
chr3 (9-163)||(54246095-54246249)
chr3 (9-162)||(42100688-42100841)
chr3 (1-161)||(54237097-54237257)
chr3 (1-163)||(40808864-40809026)
chr3 (1-161)||(42394358-42394518)
chr3 (1-164)||(25413679-25413842)
chr3 (1-160)||(53581797-53581956)
chr3 (1-163)||(24688341-24688503)
chr3 (1-162)||(45126867-45127028)
chr3 (1-161)||(40480750-40480910)
chr3 (1-162)||(36150130-36150291)
chr3 (23-160)||(27748565-27748702)
chr3 (23-163)||(53273645-53273785)
chr3 (1-120)||(52629870-52629989)
chr3 (1-147)||(51249323-51249469)
chr3 (1-163)||(11064661-11064821)
chr3 (1-160)||(1078229-1078379)
chr3 (63-163)||(4190266-4190366)
chr3 (63-163)||(9434123-9434223)
chr3 (74-164)||(25996266-25996356)
chr3 (63-163)||(10457893-10457993)
chr3 (1-60)||(29556898-29556956)
chr3 (60-163)||(29558232-29558335)
chr3 (63-162)||(34791829-34791928)
chr3 (63-163)||(52627978-52628078)
chr3 (63-162)||(51757593-51757692)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-163)||(684-846)
[»] chr6 (18 HSPs)
chr6 (1-163)||(26669948-26670110)
chr6 (1-164)||(9698272-9698435)
chr6 (1-163)||(7273274-7273436)
chr6 (1-163)||(3213399-3213561)
chr6 (1-163)||(7292746-7292908)
chr6 (1-164)||(21293616-21293779)
chr6 (9-162)||(13743168-13743321)
chr6 (9-162)||(13748668-13748821)
chr6 (1-160)||(24203926-24204085)
chr6 (1-163)||(7367548-7367710)
chr6 (1-163)||(26466798-26466960)
chr6 (9-164)||(21279927-21280082)
chr6 (1-160)||(30735984-30736143)
chr6 (1-162)||(30014343-30014504)
chr6 (63-163)||(33242402-33242502)
chr6 (63-160)||(27441544-27441641)
chr6 (85-164)||(31109245-31109324)
chr6 (63-162)||(33253913-33254012)
[»] chr5 (15 HSPs)
chr5 (1-163)||(18033981-18034143)
chr5 (1-162)||(41334602-41334763)
chr5 (1-162)||(2614588-2614749)
chr5 (1-162)||(22512305-22512466)
chr5 (1-163)||(33801468-33801630)
chr5 (1-160)||(5256997-5257156)
chr5 (1-163)||(7617132-7617294)
chr5 (1-163)||(38470578-38470740)
chr5 (1-160)||(25914935-25915085)
chr5 (26-164)||(39122397-39122534)
chr5 (63-162)||(32473395-32473494)
chr5 (87-162)||(33855068-33855143)
chr5 (63-164)||(17208072-17208173)
chr5 (26-75)||(39122320-39122369)
chr5 (63-163)||(30622720-30622819)
[»] chr8 (27 HSPs)
chr8 (1-162)||(11582766-11582927)
chr8 (1-162)||(29705362-29705523)
chr8 (1-163)||(36743422-36743584)
chr8 (1-163)||(30660681-30660843)
chr8 (1-160)||(29800889-29801048)
chr8 (1-164)||(42197374-42197537)
chr8 (9-160)||(42295197-42295347)
chr8 (1-162)||(2165902-2166063)
chr8 (4-161)||(45397317-45397474)
chr8 (1-164)||(2546994-2547157)
chr8 (1-160)||(30912501-30912660)
chr8 (1-163)||(5754902-5755064)
chr8 (1-160)||(20148762-20148921)
chr8 (9-164)||(31384662-31384817)
chr8 (1-160)||(26125637-26125795)
chr8 (1-146)||(3743787-3743932)
chr8 (9-162)||(1375542-1375695)
chr8 (4-120)||(9241594-9241710)
chr8 (10-164)||(40528582-40528737)
chr8 (66-160)||(42699259-42699353)
chr8 (63-163)||(35181515-35181615)
chr8 (63-163)||(34304787-34304887)
chr8 (63-164)||(18066719-18066820)
chr8 (63-160)||(33629994-33630091)
chr8 (69-164)||(16603633-16603728)
chr8 (68-161)||(16358839-16358933)
chr8 (125-162)||(28977146-28977183)
[»] chr7 (30 HSPs)
chr7 (1-162)||(5810863-5811024)
chr7 (1-162)||(24000951-24001112)
chr7 (1-162)||(42538370-42538531)
chr7 (23-164)||(35069719-35069860)
chr7 (1-162)||(42972852-42973013)
chr7 (1-163)||(5015394-5015556)
chr7 (1-160)||(43343563-43343722)
chr7 (1-160)||(44416873-44417032)
chr7 (1-163)||(41861673-41861837)
chr7 (1-140)||(32029756-32029895)
chr7 (1-160)||(44326180-44326339)
chr7 (1-159)||(26898341-26898499)
chr7 (9-146)||(27393207-27393344)
chr7 (9-160)||(10573751-10573902)
chr7 (1-164)||(43317441-43317604)
chr7 (11-164)||(5194180-5194333)
chr7 (1-160)||(4638138-4638297)
chr7 (1-160)||(16180296-16180454)
chr7 (1-162)||(45326020-45326181)
chr7 (1-164)||(9216300-9216462)
chr7 (1-139)||(38160518-38160656)
chr7 (23-164)||(24280557-24280698)
chr7 (63-161)||(31408634-31408732)
chr7 (74-163)||(40236918-40237007)
chr7 (63-162)||(31513287-31513386)
chr7 (1-82)||(47279663-47279744)
chr7 (95-162)||(39998408-39998475)
chr7 (63-163)||(27535232-27535332)
chr7 (129-164)||(38160661-38160696)
chr7 (63-163)||(33384869-33384970)
[»] chr2 (29 HSPs)
chr2 (1-165)||(30838629-30838793)
chr2 (1-161)||(19047158-19047318)
chr2 (4-162)||(1750414-1750572)
chr2 (1-160)||(43490340-43490499)
chr2 (3-162)||(13780676-13780835)
chr2 (9-163)||(12302200-12302354)
chr2 (10-163)||(43335711-43335864)
chr2 (1-163)||(4764665-4764827)
chr2 (1-162)||(16096747-16096909)
chr2 (1-120)||(42849798-42849916)
chr2 (11-161)||(34817725-34817875)
chr2 (1-164)||(42026765-42026930)
chr2 (23-160)||(8896544-8896681)
chr2 (84-160)||(33229303-33229380)
chr2 (63-160)||(41281975-41282072)
chr2 (63-163)||(16803967-16804067)
chr2 (63-163)||(16843249-16843349)
chr2 (63-163)||(43114556-43114656)
chr2 (63-162)||(12415461-12415560)
chr2 (63-162)||(12427521-12427620)
chr2 (63-160)||(11825655-11825752)
chr2 (50-124)||(39149280-39149354)
chr2 (69-164)||(18491703-18491798)
chr2 (63-163)||(966835-966935)
chr2 (63-163)||(34895742-34895842)
chr2 (73-160)||(7070418-7070505)
chr2 (77-160)||(6518484-6518566)
chr2 (127-162)||(42849911-42849946)
chr2 (63-124)||(4451951-4452012)
[»] chr4 (36 HSPs)
chr4 (1-163)||(1771205-1771367)
chr4 (1-162)||(27550309-27550470)
chr4 (1-163)||(33703140-33703302)
chr4 (9-159)||(23204725-23204875)
chr4 (10-162)||(35017733-35017884)
chr4 (1-160)||(27893781-27893940)
chr4 (1-163)||(55966285-55966447)
chr4 (18-163)||(28988472-28988617)
chr4 (1-160)||(43514625-43514784)
chr4 (9-163)||(23035979-23036133)
chr4 (1-163)||(27864563-27864725)
chr4 (1-163)||(28982761-28982923)
chr4 (10-163)||(25051692-25051845)
chr4 (1-160)||(43949740-43949900)
chr4 (1-164)||(48463389-48463552)
chr4 (1-161)||(41878407-41878567)
chr4 (1-160)||(43735744-43735903)
chr4 (9-160)||(39631102-39631254)
chr4 (23-162)||(27316674-27316813)
chr4 (1-160)||(31680904-31681063)
chr4 (1-162)||(12496956-12497117)
chr4 (23-120)||(51512226-51512323)
chr4 (10-162)||(45490261-45490413)
chr4 (23-162)||(41847971-41848110)
chr4 (1-160)||(41327482-41327641)
chr4 (23-164)||(21687004-21687145)
chr4 (23-160)||(46412430-46412557)
chr4 (63-162)||(17619153-17619252)
chr4 (63-163)||(711959-712059)
chr4 (63-162)||(55272377-55272476)
chr4 (11-108)||(56215847-56215943)
chr4 (95-160)||(3756279-3756344)
chr4 (63-164)||(32728355-32728456)
chr4 (63-164)||(48435580-48435681)
chr4 (74-160)||(35037007-35037093)
chr4 (84-163)||(960892-960971)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-161)||(112656-112816)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-164)||(14128-14290)
scaffold0187 (1-164)||(24456-24618)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-163)||(11250-11412)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-162)||(23360-23521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (63-160)||(45720-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (63-162)||(35457-35556)


Alignment Details
Target: chr1 (Bit Score: 134; Significance: 6e-70; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43571025 - 43571186
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  43571025 aatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 43571124  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43571125 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5489937 - 5489775
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  5489937 aatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 5489838  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  5489837 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 5489775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48498901 - 48499063
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  48498901 aatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 48499000  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||| |||||||||||  |||||| ||||||| ||||||| |||||||||||||    
T  48499001 tccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 48499063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 37814939 - 37814778
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  37814939 aatacaccctttacatccatataaaattctgacacgtggcaatctggaccccacataaatagaagataaagtgtggttgtgaaatgaatttaccaaaata 37814840  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||| ||||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  37814839 tccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 750244 - 750407
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  750244 aatacaccctttacacccacacaaaattctgacacgtggtaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttatcaaaata 750343  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  750344 tccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttccta 750407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 7447986 - 7447828
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7447986 aatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 7447887  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||  |||||||| |||||||||||| | |||||||||||||| |||||| ||||||||||    
T  7447886 tctgtaatacat-gggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24769438 - 24769600
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  24769438 aatacactctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgataagaacttaccaaaata 24769537  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||||||||||||||||  |||||| |||||| |||||||| | |||||||||||    
T  24769538 tccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcct 24769600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4401489 - 4401329
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4401489 aatacaccctttacacccacacaaaattctgacacgtggcatattggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 4401390  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcacgtaacatttt 160  Q
    || ||||||||||||||||||||||| |||||||||| |||| ||||||| ||| ||||||    
T  4401389 tctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 23989462 - 23989625
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||    
T  23989462 aatacaccctttacacccacacaagattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagataaatttaccaaaata 23989561  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| |||| ||||||   ||||| |||| |||||||||||| |||||||||||||    
T  23989562 tccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcct 23989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 50448199 - 50448360
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||| |||||| |||||||||||||| ||||||||| | |||||||||  ||||||    
T  50448199 aatacaccctttacacccacacaaaattctgacacgtggcaacatggaacccacaaaaatagaagataaaatgtggttgtaagatgaacttacaaaaata 50448298  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||  |||||||||||  |||||| ||||||| ||||||| ||||||||||||    
T  50448299 tccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 2497501 - 2497660
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||| ||||| |||||||||||||| ||| ||| ||||| |||||| ||||||| |||||||||||||||||| ||||||||| |||||||    
T  2497501 aatacaccctttatacccacataaaattctgacacgtgacaatctggatcccacataaatagatgataaagtgtggttgtgagatgaacttaccaaaata 2497600  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||| ||||| |||||||||||||||   |||| ||||||| |||||| | ||||||||||    
T  2497601 tccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 4888196 - 4888085
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||| ||| | |||||||||| |  ||||||  ||||| |||||||||||||| ||||||||||||||||| || |||||| |||||||||||||||    
T  4888196 ctttacatccacacaaaattctgatacatggcaatttggacaccacacaaatagaaaataaagtgtggttgtgagataaacttaccaaaatatccctaat 4888097  T
Q  109 acatggggtgta 120  Q
    ||||||| ||||    
T  4888096 acatgggatgta 4888085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 44112776 - 44112676
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| |||||||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  44112776 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 44112677  T
Q  163 t 163  Q
    |    
T  44112676 t 44112676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 38336017 - 38335918
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||| |||||| |||||||| ||||||| || ||||||||||||| ||||||||||||    
T  38336017 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 48119727 - 48119628
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  48119727 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 35003393 - 35003294
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| ||||  ||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  35003393 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 41065252 - 41065151
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| ||||||  ||||||| ||||||||||||||   |||||| || ||||||||||||| ||||||||||||    
T  41065252 aagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcc 41065153  T
Q  163 ta 164  Q
    ||    
T  41065152 ta 41065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 45427746 - 45427847
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| |||||||| ||||| |||||||||  |||||| || |||| ||| |||| ||||||||||||    
T  45427746 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcc 45427845  T
Q  163 ta 164  Q
    ||    
T  45427846 ta 45427847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 164
Target Start/End: Original strand, 38113202 - 38113297
Alignment:
Q  69 aagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||| ||||||||| ||||| ||| |||||| ||  |||| |||||||||||||||  |||||| || |||||||||||||  |||||||||||||    
T  38113202 aagtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttccta 38113297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 46168482 - 46168383
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||| ||| |||||||||||  | | || || ||||||||||||| ||||||||||||    
T  46168482 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 45705924 - 45705823
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| |||||||||| ||| |||| ||||| |||||||||    |||| || |||||||||||||  |||||||||||    
T  45705924 aagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcc 45705825  T
Q  163 ta 164  Q
    ||    
T  45705824 ta 45705823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 45639733 - 45639833
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| || |||||| ||||| ||| |||||||||| ||||  ||||||||||||||  | |||| || ||||| ||||||| ||||||||||||    
T  45639733 aagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcc 45639832  T
Q  163 t 163  Q
    |    
T  45639833 t 45639833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 35000114 - 35000213
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| || || |||||||||| |||||||||||||  || ||||||   ||||| || |||| |||||||| ||||||||||||    
T  35000114 aagagaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 14427404 - 14427346
Alignment:
Q  105 taatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||| |||| ||||||||||  |||||| || ||||||||||||| |||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 14427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46941214 - 46941052
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  46941214 aatacactctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 46941115  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  46941114 tccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcct 46941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 47190965 - 47191126
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47190965 aatacaccctttacacccacacaaaattctgacatgtggtaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 47191064  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47191065 tctctaatacat-gggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 47191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 54246095 - 54246249
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||    
T  54246095 ctttacacccacataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatctctaat 54246194  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  54246195 acatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 54246249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 42100841 - 42100688
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| |||||||||||||| ||||||||||| || ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||||||    
T  42100841 ctttacacccacataaaattctgacacgtggcaacctgaactccacacaaataaaagataaaatgtggttgtgagatgaacttaccaaaatatccctaat 42100742  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42100741 acatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 54237257 - 54237097
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  54237257 aatacaccctttacacccatacaatattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 54237158  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||    
T  54237157 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40809026 - 40808864
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  40809026 aatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 40808927  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| | |||||||||||||    
T  40808926 tccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcct 40808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42394358 - 42394518
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42394358 aatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 42394457  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||||||||||| ||||||||||||   ||||||||||||||||||||| |||||||||||    
T  42394458 tccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25413842 - 25413679
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||    
T  25413842 aatacaccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaata 25413743  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  25413742 tccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttccta 25413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 53581797 - 53581956
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53581797 aatacaccctttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 53581896  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||||||||| || |||||||||  ||||| |||||||| ||||||| ||||||||||    
T  53581897 tccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24688341 - 24688503
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  ||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  24688341 aatacaccatttacccccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaata 24688440  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| ||||||||||||  |||||| ||||||||||||||| |||||||||||||    
T  24688441 tccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcct 24688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 45126867 - 45127028
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| ||||||||||| ||||||| || |||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||    
T  45126867 aatacaccctttacacccacataaaattctggcatgtggtaatctggaccccacataaatagaaaataaagtgtggttgtgagatgaacttaccaaaata 45126966  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||| | ||||||||||||    
T  45126967 tccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 40480910 - 40480750
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  40480910 aatacaccctttacacccacacaaaattctgacacgtggcaacctggaccctacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 40480811  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||||||||||| || ||||||||| ||  || |||||||||||||||| |||||||||||    
T  40480810 tccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36150291 - 36150130
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  36150291 aatacaccctttacatccacacaaaattctgacacgtggcaacctggactccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 36150192  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||| |||||| ||||||| |||| |||||| ||||||||||| |||| ||||||||||||    
T  36150191 tccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 27748702 - 27748565
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||  |||||| |    
T  27748702 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtata 27748603  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||||||| ||||||| |||||||| ||||||||||    
T  27748602 atgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 53273645 - 53273785
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||| | |||| |||||||| |||||| ||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  53273645 aaaattctgatacgtggtaacctggatcccacataaataaaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtaca 53273744  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||| |||||||||| | ||||||  ||||||||||||    
T  53273745 atgaggtataggaataaatgatgttcatataacattttcct 53273785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 52629989 - 52629870
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||  ||||||    
T  52629989 aatacaccctttacacccacacaaaattctgacacgtagcaacctggaccctacataaatagaagataaagtgtggttgtgagatgaacttacaaaaata 52629890  T
Q  101 tccctaatacatggggtgta 120  Q
    ||| |||||||| |||||||    
T  52629889 tccttaatacatagggtgta 52629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 51249469 - 51249323
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| | |||||  |||| |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||| ||| |||||||    
T  51249469 aatacactccttacattcatacaaaattctgacatgtggcaatctggatcccacacaaatagaagagaaagtgtggttgtgagatgaatttaccaaaata 51249370  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgtt 147  Q
    ||| |||| |||| |||||| |||| | ||   ||||||||||||||    
T  51249369 tccttaatgcatgaggtgtataatgggttgggtgaataaagggtgtt 51249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11064661 - 11064821
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| | ||||||||| | |||||| |||||||||| || || ||||||||||||||||||||  ||||||| || ||| ||||| | |||||||||    
T  11064661 aatacaccccttacacccacacaaaattttgacatgtggtaatctagaccccacacaaatagaagagtaagtgtgattatgagatgaattaatcaaaata 11064760  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    || ||||  ||| ||||||||||||||||||| ||||||| | ||||||  ||||||||||||    
T  11064761 tctctaaagcatagggtgtacaatgaggtgtatgaataaatgatgttca--taacattttcct 11064821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 1078379 - 1078229
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| ||||||||||| || ||||||||||||||||||        |||||| |||||| ||  ||||||    
T  1078379 aatacaccctttacatccacacaaaattctgacacgtggcaacctgaactccacacaaatagaagata--------ttgtgagatgaacctacaaaaata 1078288  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||| ||||||||  |||||||||||||||| |||||||||||||||||| ||||||||||    
T  1078287 tcc-taatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 4190266 - 4190366
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| ||||||||| |||||||||  ||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  4190266 aagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T
Q  163 t 163  Q
    |    
T  4190366 t 4190366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 9434223 - 9434123
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| |||||||| |||||||||||||||   ||||| || ||||||||||||| ||||||||||||    
T  9434223 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 9434124  T
Q  163 t 163  Q
    |    
T  9434123 t 9434123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 25996356 - 25996266
Alignment:
Q  74 tggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||| ||||| ||| |||||| ||| ||||| |||||||||||||| || |||| || ||||||||||||| ||||||||||||||    
T  25996356 tggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttccta 25996266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 10457893 - 10457993
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| || || ||| |||||||||| |||| |||||||||||||||  |||||| || |||| |||||||| ||||||||||||    
T  10457893 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 10457992  T
Q  163 t 163  Q
    |    
T  10457993 t 10457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29556898 - 29556956
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaat 60  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  29556898 aatacacaatttacacccatataaaat-ctgacatgtggcaacctgaaccccacacaaat 29556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 29558232 - 29558335
Alignment:
Q  60 tagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattt 159  Q
    ||||| ||||| |||| |||||| ||||| ||| ||| |||| ||||||| || |||||||||||||| |||| ||||||||||||||||  |||||||     
T  29558232 tagaaaataaaatgtgattgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacattg 29558331  T
Q  160 tcct 163  Q
    ||||    
T  29558332 tcct 29558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 34791928 - 34791829
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| |||| ||||| |||||||| |||| ||| ||||||  |||||| || ||||||||||||| ||||||||||||    
T  34791928 aagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 52627978 - 52628078
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| || |||||| ||||| ||| |||||||| | |||| |||| ||||||||||  | |||| || ||||||||||||||||||||||||||    
T  52627978 aagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcc 52628077  T
Q  163 t 163  Q
    |    
T  52628078 t 52628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 51757692 - 51757593
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| |||  ||||| ||| |||| |||| ||||||||||  |||||| || ||||||||||| | |||| |||||||    
T  51757692 aagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 846 - 684
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  846 aatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 747  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  746 tccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 9e-66; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26669948 - 26670110
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  26669948 aatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 26670047  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26670048 tccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 26670110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9698272 - 9698435
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9698272 aatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 9698371  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  9698372 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccta 9698435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7273274 - 7273436
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  7273274 aatacactctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaata 7273373  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  7273374 tctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcct 7273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 3213561 - 3213399
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||| |||||||    
T  3213561 aatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagataaagtatggttgtgaaatgaatttaccaaaata 3213462  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||| ||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||    
T  3213461 tccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcct 3213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7292908 - 7292746
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  7292908 aatacaccctttacacacaaacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 7292809  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| ||||||| ||||||||||| ||||||| |||||||  |||||||||||||    
T  7292808 tccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcct 7292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21293616 - 21293779
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  21293616 aatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagataaagtgtggttgtgaaatgaatttaccaaaata 21293715  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||| |||||||||||||||||| |||  |||| |||||||||||||| | ||||||||||||||    
T  21293716 tccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttccta 21293779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 13743168 - 13743321
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| | || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  13743168 ctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaat 13743267  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||  | |||| ||||||| |||||||| ||||||||||||    
T  13743268 acatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 13748668 - 13748821
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| | || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  13748668 ctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaat 13748767  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||  | |||| ||||||| |||||||| ||||||||||||    
T  13748768 acatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 24203926 - 24204085
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  24203926 aatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaatataaagtgtggttgtgagatgaacttaccaaaata 24204025  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||||||||||| |||||||||  |||||||||||||| |||||||| ||||||||||    
T  24204026 tccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7367710 - 7367548
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||| |||||||    
T  7367710 aatacaccctttacacccacacaaaattctgacacgtggcaacctggatcccacataaatagaaaataaagtgtggttgtgagatgaacttaccaaaata 7367611  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||||| |||||||||||||||| ||||||| | ||||||  ||||||||||||    
T  7367610 tccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcct 7367548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26466960 - 26466798
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||||| ||||| |||| | ||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  26466960 aatacaccttttacacccatacaaaatcctgatacgtggcaacctgaaccccaaacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 26466861  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
     ||||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||||||    
T  26466860 accctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcct 26466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 21280082 - 21279927
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  21280082 ctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaatttaccaaaatatccctaat 21279983  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||| ||| |||||   ||||| ||||||||||||||| ||||||||||||||    
T  21279982 acatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttccta 21279927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 30736143 - 30735984
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  30736143 aatacaccctttacatccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaata 30736044  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    || |||||||||| ||||||||||| ||||||||||||||  ||||||| ||||||||||    
T  30736043 tcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 30014504 - 30014343
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||| ||| ||||||||| | |||||||||||||||| ||||||||| ||||||||| |||||||    
T  30014504 aatacaccctttacatccacacaaaattctgacacgtggtaacttggaccccatataaatagaagataaagtatggttgtgagatgaacttaccaaaata 30014405  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    | ||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||||||||    
T  30014404 tgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 33242502 - 33242402
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| || |||||| ||||| ||| |||||| ||| |||||||||||||||||||| ||||||| || |||| |||||||| ||||||||||||    
T  33242502 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcc 33242403  T
Q  163 t 163  Q
    |    
T  33242402 t 33242402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 27441641 - 27441544
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||||||| || ||||||||  |||||| || ||||||||||||| ||||||||||    
T  27441641 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 31109245 - 31109324
Alignment:
Q  85 tgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||| ||||||||||||||||| | ||||||||||| |||| | |||| || ||||||||||||| ||||||||||||||    
T  31109245 tgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttccta 31109324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 33254012 - 33253913
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||| || |||||| ||||| ||| ||| || |||||||| |||||||||||||||  |||||  || |||| |||||||| ||||||||||||    
T  33254012 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 9e-66; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18034143 - 18033981
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||    
T  18034143 aatacaccctttacacccatataaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaata 18034044  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  18034043 tccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcct 18033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 41334602 - 41334763
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  41334602 aatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 41334701  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  41334702 tccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2614588 - 2614749
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  2614588 aatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 2614687  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  2614688 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22512466 - 22512305
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  22512466 aatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 22512367  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||    
T  22512366 tccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33801630 - 33801468
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||    
T  33801630 aatacactctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataaagtgtggttgtgagatgaacttactaaaata 33801531  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||||||||||    
T  33801530 tccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcct 33801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5257156 - 5256997
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||    
T  5257156 aatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaaattaccaaaata 5257057  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||| | ||||||||||    
T  5257056 tccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7617294 - 7617132
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||| | | |||||||||||||||| |||| | || |||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  7617294 aatacaccttttacaccaacacaaaattctgacatgtgacaacttagatcccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaata 7617195  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||||||||||| ||||  ||||| |||||||||||||||| |||||||||||||    
T  7617194 tccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcct 7617132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38470740 - 38470578
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||| | |||| || |||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||    
T  38470740 aatacaccctttacacccacataaaattctgatacgtggtaatctggaccccacataaatagaagataaagtgtgattgtgaaatgaatttaccaaaata 38470641  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||| |||||||||||||||||||||   |||| |||||||||||||| | |||||||||||||    
T  38470640 tccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcct 38470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 25914935 - 25915085
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||        || ||| |||||| ||  ||||||    
T  25914935 aatacaccatttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagata--------ttatgagatgaacctacaaaaata 25915026  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    | | |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  25915027 ttc-taatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 39122397 - 39122534
Alignment:
Q  26 attctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatg 125  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||| |||||||||| ||||||  |||     
T  39122397 attctgacatgtggcaacctaaaccccacacaaatagaagataaagtgtagttgtgagatgaatttaccaaaatattcctaatacat-gggtgtctaatt 39122495  T
Q  126 aggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    || |||| ||||||| |||||||| |||| | |||||||    
T  39122496 agatgtatgaataaaaggtgttcatgtaatagtttccta 39122534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 32473395 - 32473494
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| ||||||||||||||| |||| |||||||||| ||||||| || ||||||||||||| ||||||||||||    
T  32473395 aagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 33855068 - 33855143
Alignment:
Q  87 aacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 17208173 - 17208072
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| ||| |||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  17208173 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcc 17208074  T
Q  163 ta 164  Q
    ||    
T  17208073 ta 17208072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 39122320 - 39122369
Alignment:
Q  26 attctgacatgtggcaacctggaccccacacaaatagaagataaagtgtg 75  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  39122320 attctgacatgtggcaacctaaaccccacacaaatagaagataaagtgtg 39122369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 30622720 - 30622819
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| || || ||| |||||||||| |||| |||||| | ||||||  |||||| || |||||| |||||| ||||||||||||    
T  30622720 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcc 30622818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 9e-63; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11582927 - 11582766
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  11582927 aatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 11582828  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  11582827 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29705523 - 29705362
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  29705523 aatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccgcacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 29705424  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  29705423 tccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 36743422 - 36743584
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  36743422 aatacaccatttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 36743521  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  36743522 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 36743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 30660681 - 30660843
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  30660681 aatacaccctttacatccacataaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtaagatgaacttaccaaaata 30660780  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||| |||||||||||| | ||||| ||||||||||||||| |||||||||||||    
T  30660781 tccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcct 30660843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29800889 - 29801048
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  29800889 aatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaata 29800988  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||| | ||||||||||    
T  29800989 tccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 42197374 - 42197537
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42197374 aatacaccctttacacccacacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 42197473  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||||||||||| | |||| ||||| |||||||||||||| |||||||| ||||||||||||||    
T  42197474 tccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttccta 42197537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 42295347 - 42295197
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||| ||| | ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  42295347 ctttacatccacacaaaattctgacatgtggcaacttggaccc-acataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaat 42295249  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  42295248 acatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2165902 - 2166063
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  2165902 aatacaccctttacacccacacaaaattctgacacgtggcaacctgaaccccacacaaatagaagataaagtgtggttatgagatgaacttaccaaaata 2166001  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    || |||||||||||||| ||||||| |||||||||||||| |||||||| |||| |||||||    
T  2166002 tctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 45397474 - 45397317
Alignment:
Q  4 acacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatcc 103  Q
    |||| ||||||||||| | |||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||  |||||||||    
T  45397474 acaccctttacacccacacaaaattctgacacgtggcaatctggagcccacacaaatagaagataaattgtggttgtgagatgaacttacaaaaatatcc 45397375  T
Q  104 ctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  45397374 ctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2547157 - 2546994
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||    
T  2547157 aatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataaagtgtggttgtgagatgaacttactaaaata 2547058  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||||||| |||||||||||  |||||| ||||||| ||||||| ||||||||||||||    
T  2547057 tccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttccta 2546994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 30912501 - 30912660
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  30912501 aatacactctttacacccacacaaaattctgacacgtggcaacctagaccccacacaaatagaagataaggtgcggttgtgagatgaacttaccaaaata 30912600  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
     ||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||||    
T  30912601 cccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5755064 - 5754902
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||| ||| |||||||| |||| |||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  5755064 aatacaccctttacacccacacaaaattctaacacgtggcaacttggatcccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaata 5754965  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||| ||||| ||||||||| | |||||||||||| |||||||| |||||||||||||    
T  5754964 tccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcct 5754902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 20148921 - 20148762
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||| ||||||||| |||||||    
T  20148921 aatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatgataaagtgtggttgtgagatgaacttaccaaaata 20148822  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||| ||| ||||||||||| | |||| |||||||||||||| | ||||||||||    
T  20148821 tccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 31384817 - 31384662
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  31384817 ctttacatccacataaaattctgacacgtagcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatattcctaat 31384718  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||||||||||    |||| |||||||||||||||| |||| | |||||||    
T  31384717 acatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttccta 31384662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26125795 - 26125637
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||  |||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  26125795 aatacaccctttacacccgcataaaattctgacacgtggcaatctggaccc-acataaatagaagataaagtgtggttgtgagatgaacttaccaaaata 26125697  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||||||||| ||||||||||||   |||| |||||||||||||| | ||||||||||    
T  26125696 tccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 3743932 - 3743787
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| ||| |||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  3743932 aatacaccctttacacccacataaaattctgacacgtggcaatctgaaccctacataaatagaagataaagtgtggttgtgagatgaacttatcaaaata 3743833  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgt 146  Q
    | | ||||| |||||||||| |||| |  | | |||||||||||||    
T  3743832 tacttaatatatggggtgtataatgggagggatgaataaagggtgt 3743787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 1375695 - 1375542
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| | || ||||| ||| ||||||| ||| || |||||||||||||||||||||||| ||||||| || || ||| |||||||||||||||    
T  1375695 ctttacacccacacaagattctaacacgtggcaatctgaactccacacaaatagaagataaagtgtagttgtgagataaatttaccaaaatatccctaat 1375596  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    | ||||||||||||||  |||||| ||||||| |||||||| |||| |||||||    
T  1375595 atatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 9241710 - 9241594
Alignment:
Q  4 acacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatcc 103  Q
    |||| |||| |||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||||||    
T  9241710 acaccctttgcacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatcc 9241611  T
Q  104 ctaatacatggggtgta 120  Q
    |||||| || |||||||    
T  9241610 ctaatatatagggtgta 9241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 40528582 - 40528737
Alignment:
Q  10 tttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaata 109  Q
    |||||| ||| | |||||| ||||||||| |||| || ||||||||||||||||||| ||||||||||||||| || || |||||||||| |||||||||    
T  40528582 tttacatccacacaaaattatgacatgtgacaacttgaaccccacacaaatagaagagaaagtgtggttgtgagataaatttatcaaaatgtccctaata 40528681  T
Q  110 catggggtgtacaatgaggtgtaggaat-aaagggtgttcacgtaacattttccta 164  Q
     ||||||||||||||| ||| |  |||| |||||||||||| |||  |||||||||    
T  40528682 tatggggtgtacaatggggtttgtgaataaaagggtgttcatgtattattttccta 40528737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 42699353 - 42699259
Alignment:
Q  66 ataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||| |||||||||  ||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  42699353 ataaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 35181615 - 35181515
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| |||||||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  35181615 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35181516  T
Q  163 t 163  Q
    |    
T  35181515 t 35181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 34304887 - 34304787
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| |||||||| |||||||||||||||  |||||| || |||||| |||||| ||||||||||||    
T  34304887 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 34304788  T
Q  163 t 163  Q
    |    
T  34304787 t 34304787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 18066719 - 18066820
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| |||  ||||||||||||||||||||| ||||||||    |||| || ||||||||||||| ||||||||||||    
T  18066719 aagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcc 18066818  T
Q  163 ta 164  Q
    ||    
T  18066819 ta 18066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 33629994 - 33630091
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||| ||||| | ||||||| ||||| |||  ||||| |||||||| ||| ||||||||||||||||||| || ||||||||||||  ||||||||||    
T  33629994 aagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 164
Target Start/End: Original strand, 16603633 - 16603728
Alignment:
Q  69 aagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||| ||||||||| ||||| ||| |||||| ||  |||| ||||||||||| ||| ||||||| || |||||||||| || ||||||||||||||    
T  16603633 aagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttccta 16603728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 16358839 - 16358933
Alignment:
Q  68 aaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttc-acgtaacattttc 161  Q
    ||||| ||||||||| ||||| |||||||||||| | |||| |||||| ||||||||  |||||| || |||||||| ||| | |||||||||||    
T  16358839 aaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 28977183 - 28977146
Alignment:
Q  125 gaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  28977183 gaggtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 9e-63; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5810863 - 5811024
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5810863 aatacaccctttacacccatacaaaattttgacatgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 5810962  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||| || |||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  5810963 tccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24000951 - 24001112
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  24000951 aatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 24001050  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  24001051 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42538370 - 42538531
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42538370 aatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 42538469  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  42538470 tccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 35069860 - 35069719
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  35069860 aaaattctgacacgtggcaacttggacctcacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtaca 35069761  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  35069760 atgaggtgtaggaataaagagtgttcatgtaacattttccta 35069719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42973013 - 42972852
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  42973013 aatacaccatttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaaatgtggttgtgagatgaacttaccaaaata 42972914  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||| |||||||||||  ||||||||||||||| |||||| ||||||||||||    
T  42972913 tccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5015556 - 5015394
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  ||||||| || | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  5015556 aatacaccttttacactcacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 5015457  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||| |||||||||||  |||||| ||||||| ||||||| |||||||||||||    
T  5015456 tccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 5015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 43343563 - 43343722
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43343563 aatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 43343662  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||||||||||  ||||||| |||||| | |||||| ||||||||||    
T  43343663 tccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44416873 - 44417032
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44416873 aatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaata 44416972  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||||||||||  ||||||| |||||| | |||||| ||||||||||    
T  44416973 tccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41861837 - 41861673
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || |||||| |||||||    
T  41861837 aatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccatacaaatagaagataaagtgtggttgtgagataaacttaccaaaata 41861738  T
Q  101 tccc--taatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    || |  |||||||| ||||||| |||  |||||| |||||||||||||||| |||||||||||||    
T  41861737 tctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcct 41861673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32029756 - 32029895
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| | ||||| ||| |||||||    
T  32029756 aatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtggttgttagatgaatttaccaaaata 32029855  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaa 140  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  32029856 tccctaatacatggggtgtacaatggggtgtaggaataaa 32029895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44326339 - 44326180
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||| ||||||||| |||||||    
T  44326339 aatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatgataaagtgtggttgtgagatgaacttaccaaaata 44326240  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||| ||| ||||||||||| | |||| |||||||||||||| | ||||||||||    
T  44326239 tccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 26898341 - 26898499
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||| |||||||    
T  26898341 aatacaccttttacacccacataaaattctgacacgtggtaacctggaccccacacaaatagaatataaagtgtggttgtaagatgaacttaccaaaata 26898440  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattt 159  Q
    ||||||||||||||  ||||||||  |||||| ||||||| |||||||| |||||||||    
T  26898441 tccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 27393207 - 27393344
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  27393207 ctttacacccacataaaattctgacatgaggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaat 27393306  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgt 146  Q
    |||| | |||||||||  | ||||||||||||||||||    
T  27393307 acatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 10573902 - 10573751
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| |||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||| ||||||    
T  10573902 ctttacacccacataaaattctgatatgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaatttaccaaaatattcctaat 10573803  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||  | |||| |||||||||||||| | ||||||||||    
T  10573802 acatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

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Target: chr7; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43317604 - 43317441
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| | ||||||||| | |||||||||||||||||||| || ||||||||||||||||||||  ||||||| |||||| ||||| |||||||||||    
T  43317604 aatacaccccttacacccacacaaaattctgacatgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatcaaaata 43317505  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||||||  ||| || |||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  43317504 tccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttccta 43317441  T

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Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 5194180 - 5194333
Alignment:
Q  11 ttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatac 110  Q
    ||||||||| | |||||| ||||||||||||| || ||||||||||||||||||||  ||||||| |||||| ||||| |||||||||||||| ||| ||    
T  5194180 ttacacccacacaaaattttgacatgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatcaaaatatccttaaaac 5194279  T
Q  111 atggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    || ||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  5194280 atagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttccta 5194333  T

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Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4638138 - 4638297
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||||| || ||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  4638138 aatacaccctttacatccatacaagattctgacacgtggtaacctagaccccacacaaatagaagataaagtatggttgtgagatgaacttaccaaaata 4638237  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||| ||||| ||||||||||||||   ||||| ||||||| |||||||| ||||||||||    
T  4638238 tccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

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Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16180296 - 16180454
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  16180296 aatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaatttaccaaaata 16180395  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |   |||||| |||||||||||||| |||||||||||||| |||||| | ||||||||||    
T  16180396 tttataatacgtggggtgtacaatg-ggtgtaggaataaatggtgttgatgtaacatttt 16180454  T

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Target: chr7; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 45326181 - 45326020
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||| |||||||||||||| |||| |  |||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  45326181 aatacaccatttacacccacataaaattctgacaggtggtagtctggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaata 45326082  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||| ||||||||||||||| | |||| ||||||| |||||| | |||||| |||||    
T  45326081 tccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9216462 - 9216300
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | |||||||||||||| |||||| |  ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  9216462 aatacaccttttacatccacacaaaattctgacatgcggcaacttaaaccccacacaaatagaagataaaatgtggttgtgagatgaacttaccaaaata 9216363  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    || ||||| ||| |||||||||||  | | ||||||||||||||||||| ||||||||||||||    
T  9216362 tctctaatgcat-gggtgtacaataggatataggaataaagggtgttcatgtaacattttccta 9216300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 38160518 - 38160656
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| | ||||||||| | |||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||| ||||| |||  ||||||    
T  38160518 aatacaccccttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtagttgtgagatgaagttactaaaata 38160617  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataa 139  Q
    |||||||||||||||||||||||||  ||||| ||||||    
T  38160618 tccctaatacatggggtgtacaatggagtgtaagaataa 38160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 24280557 - 24280698
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||| || ||||||| |||||||||||||||||||||| |||||||| |||||| ||||| ||| ||||||||  ||| | |||||| |||| |    
T  24280557 aaaattctgatatatggcaacttggaccccacacaaatagaagagaaagtgtgattgtgagatgaatttaccaaaatatttctagtgcatgggatgtaga 24280656  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||  |||||| |||||||||||||||||||||||||||||||    
T  24280657 atagggtgtatgaataaagggtgttcacgtaacattttccta 24280698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 31408634 - 31408732
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||| ||||| ||||||||||||||| ||| |||||||||| |||| |||||| ||||||||   ||||| || ||||||||||||| |||||||||||    
T  31408634 aagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 40237007 - 40236918
Alignment:
Q  74 tggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||| ||||| ||| |||||| |||||||| |||||||||||||||  | |||| || ||||||||||||| |||||||||||||    
T  40237007 tggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcct 40236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 31513386 - 31513287
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||| |||||||| ||||||  |||||| || ||||| ||||||| ||||||||||||    
T  31513386 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47279663 - 47279744
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtga 82  Q
    ||||||| ||||| ||||| |||||||||||| |||||| || ||||| || | | ||||||||||||||||||||||||||    
T  47279663 aatacaccctttatacccacataaaattctgatatgtggtaatctggatcctatataaatagaagataaagtgtggttgtga 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  95 aaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||||||||  | |||| || ||||  ||||||| ||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 27535232 - 27535332
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| | ||||||| ||||| ||| |||||| ||  ||| |||||| |||||||||   ||||| || ||||||||||||| ||||||||||||    
T  27535232 aagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 27535331  T
Q  163 t 163  Q
    |    
T  27535332 t 27535332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 38160661 - 38160696
Alignment:
Q  129 tgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38160661 tgtaggaataaagggtgttcatgtaacattttccta 38160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 33384970 - 33384869
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaat-gaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||| ||||| || |||||| ||||| ||| |||||| |||||||| ||||| || |||||| | |||||| || |||| | |||||| |||||||||||    
T  33384970 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttc 33384871  T
Q  162 ct 163  Q
    ||    
T  33384870 ct 33384869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 8e-60; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 30838793 - 30838629
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||| | | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  30838793 aatacaccttttacacctacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 30838694  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcctac 165  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||    
T  30838693 tccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcctac 30838629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 19047318 - 19047158
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  19047318 aatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 19047219  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||||||||||| ||||||||||||   ||||||||||||||||||||| |||||||||||    
T  19047218 tccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 1750572 - 1750414
Alignment:
Q  4 acacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatcc 103  Q
    |||| |||||||| || | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  1750572 acaccctttacactcacacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatcc 1750473  T
Q  104 ctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1750472 ctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 43490340 - 43490499
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||    
T  43490340 aatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacataaatagaagataaagtgtggttatgagatgaacttaccaaaata 43490439  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||||||||| | |||||||||| | ||||||||||||||||||||| ||||||||||    
T  43490440 tccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 13780676 - 13780835
Alignment:
Q  3 tacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatc 102  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||||    
T  13780676 tacaccctttacacctatacaaaattctgacatgtggcaacctggaccccacataaatagaagagaaagtgtggttgtgagatgaatttatcaaaatatc 13780775  T
Q  103 cctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||  |||||||||||||||||||||  |||||||  ||||| | ||||||||||||    
T  13780776 cctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 12302200 - 12302354
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||| ||| | ||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  12302200 ctttacatccacacaaaattctgacacatggtaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaat 12302299  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||| |||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  12302300 acatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 12302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 43335711 - 43335864
Alignment:
Q  10 tttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaata 109  Q
    |||||| ||| | |||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  43335711 tttacatccacacaaaattctgacacgtggcaacctggatcccacataaatagaagataaagtgtagttgtgagatgaacttaccaaaatatccctaata 43335810  T
Q  110 catggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||| |||||||||||||||||||||||| | ||||||  ||||||||||||    
T  43335811 catgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcct 43335864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4764665 - 4764827
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  4764665 aatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaatttaccaaaata 4764764  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |   ||||||||||||||||||||  |||||||||||||| |||||| | |||||||||||||    
T  4764765 tttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcct 4764827  T

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Target: chr2; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16096909 - 16096747
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggacccc-acacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaat 99  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| | |||||| ||| || ||||||||||||||||||||||| || |||| | ||||||    
T  16096909 aatacaccctttacacccacacaaaattctgacacgtggcaacttagacccccacataagtagaagataaagtgtggttgtgagattaactcaccaaaat 16096810  T
Q  100 atccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  16096809 atccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

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Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42849798 - 42849916
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  42849798 aatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaa-ataaagtgtggttgtgagatgaacttatcaaaata 42849896  T
Q  101 tccctaatacatggggtgta 120  Q
    ||||||||||||||||||||    
T  42849897 tccctaatacatggggtgta 42849916  T

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Target: chr2; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 34817725 - 34817875
Alignment:
Q  11 ttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatac 110  Q
    ||||||||||| |||||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||| ||||| ||| |||||| | | || | |    
T  34817725 ttacacccatacaaaattctgacatgtggcaacctggatcccgtacaaatagaagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgc 34817824  T
Q  111 atggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  34817825 atggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

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Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 42026930 - 42026765
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| | ||||||||| | ||||||||||||| | ||||||| |||||||||||||||||| | ||||||| ||||||| ||||| ||  |||||||    
T  42026930 aatacaccccttacacccacacaaaattctgacatcttgcaacctagaccccacacaaatagaaaagaaagtgtagttgtgagatgaatttgccaaaata 42026831  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaa--gggtgttcacgtaacattttccta 164  Q
    |||||||| |  ||| |||||||||   |||| |||||||  ||||||||| ||||||||||||||    
T  42026830 tccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttccta 42026765  T

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Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 8896544 - 8896681
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||||||||||||||| ||| ||||||||||||| | |||||||| |||||| ||||| ||| |||||||| |||| |  || |||||||||    
T  8896544 aaaattctgacatgtggcaacctgaacctcacacaaatagaaaagaaagtgtgattgtgagatgaatttaccaaaatattcctattgtatagggtgtaca 8896643  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||   |||  |||||||||||||||| ||||||||||    
T  8896644 atggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 33229380 - 33229303
Alignment:
Q  84 atgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcacgtaacatttt 160  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  33229380 atgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

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Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 41281975 - 41282072
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||| ||||| ||||||||| ||||| |||||||||| |||||||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||    
T  41281975 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 16804067 - 16803967
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| |||||||||| |||||||| |||||| ||||||||  |||||| || ||||||||||||| ||||||||||||    
T  16804067 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16803968  T
Q  163 t 163  Q
    |    
T  16803967 t 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 16843349 - 16843249
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| |||||||||| |||||||| |||||| ||||||||  |||||| || ||||||||||||| ||||||||||||    
T  16843349 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16843250  T
Q  163 t 163  Q
    |    
T  16843249 t 16843249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 43114656 - 43114556
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||| |||||||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  43114656 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 43114557  T
Q  163 t 163  Q
    |    
T  43114556 t 43114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 12415461 - 12415560
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| || || ||| |||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||| ||||||||||||    
T  12415461 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

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Target: chr2; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 12427521 - 12427620
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| || || ||| |||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||| ||||||||||||    
T  12427521 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

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Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 11825655 - 11825752
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||| ||||| || |||||| ||||| ||| |||||| |||||||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||    
T  11825655 aagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 39149280 - 39149354
Alignment:
Q  50 cccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaat 124  Q
    |||||||||||| |||||||||||| ||||||  ||||||||| ||||||||| ||||||||| || ||||||||    
T  39149280 cccacacaaataaaagataaagtgtagttgtgggatgaacttaccaaaatatctctaatacataggatgtacaat 39149354  T

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Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 18491798 - 18491703
Alignment:
Q  69 aagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||| ||||||||| ||||| ||| |||||| | | |||| |||| ||||||||||  |||||| || ||||||||||||| ||||||||||||||    
T  18491798 aagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccta 18491703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 966835 - 966935
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| || |||||| ||||| ||| |||||  | | |||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  966835 aagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 966934  T
Q  163 t 163  Q
    |    
T  966935 t 966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 34895742 - 34895842
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||| || |||||| ||||| ||| ||| || |||||||| |||||||||||||||  |||||  || |||| |||||||| |||||| |||||    
T  34895742 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 34895841  T
Q  163 t 163  Q
    |    
T  34895842 t 34895842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 7070505 - 7070418
Alignment:
Q  73 gtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||||| | ||||| |||||||||| |||| |||| |||| |  ||||||| | |||| |||||||||||||||| ||||||||||    
T  7070505 gtggttgtaagatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 6518484 - 6518566
Alignment:
Q  77 ttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||||| ||||| ||| |||||| |||||||| |||||||||||||||   ||||| || |||| |||||||| ||||||||||    
T  6518484 ttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 42849911 - 42849946
Alignment:
Q  127 ggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42849911 ggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 4451951 - 4452012
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaat 124  Q
    |||| ||||| ||||||||| ||||| ||| ||||||||||||||| |||  ||||||||||    
T  4451951 aagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgtacaat 4452012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 1e-58; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1771205 - 1771367
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||| | |||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  1771205 aatacaccctttacacccacacaaaattctgagacgtggcaacttggaccccacataaatagaagataaaatgtggttgtgagatgaacttatcaaaata 1771304  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  1771305 tctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 1771367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27550470 - 27550309
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||    
T  27550470 aatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacataaatagaagataaagtgtggttgtaagatgaacttaccaaaata 27550371  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||| |||||||||||  |||||| ||||||||||||||| ||||||||||||    
T  27550370 tccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33703302 - 33703140
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| | |||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  33703302 aatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccgcacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 33703203  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||    
T  33703202 tccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 33703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 23204725 - 23204875
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  23204725 ctttacacccacataaaattctgacatgtggcaacctggaccccacataaatagaagataaagtgtggttgtgacatgaacttacaaaaatatccctaat 23204824  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattt 159  Q
    |||| || ||||||||| | ||||||||||||| ||||||| |||||||||    
T  23204825 acataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 35017884 - 35017733
Alignment:
Q  10 tttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaata 109  Q
    |||||| ||| | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||    
T  35017884 tttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccct-ata 35017786  T
Q  110 catggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  35017785 catggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 27893781 - 27893940
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||    
T  27893781 aatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaaattaccaaaata 27893880  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||| | ||||||||||    
T  27893881 tccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 55966285 - 55966447
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| || ||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||    
T  55966285 aatacaccctttacacccacataaaattctgacaggtggcaatctagaccccacataaatagaagataaattgtggttgtgagatgaacttaccaaaata 55966384  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||||| ||||||||| | |||| |||||||||||||| | |||||||||||||    
T  55966385 tccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcct 55966447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 28988617 - 28988472
Alignment:
Q  18 catataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggt 117  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||| |||||| | ||||||||    
T  28988617 catacaaaattctgacatatggcaacctggaccccacacaaatagaagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggt 28988518  T
Q  118 gtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  28988517 gtacaatgaggtgtatgaataaagggtgttcatgtaacattttcct 28988472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 43514625 - 43514784
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  43514625 aatacactctttacatccacaaaaaattctgacacgtggcaacctagaccccacacaaatagaagataaggtgtggttgtgagatgaacttaccaaaata 43514724  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
     ||||||||||||  ||||||||||  |||||||||||||||||||||| ||||||||||    
T  43514725 accctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 23036133 - 23035979
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  23036133 ctttacacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaat 23036034  T
Q  109 acatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    | || |||||||||||  ||||||||||||||||  ||||| |||||||||||||    
T  23036033 atatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcct 23035979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27864725 - 27864563
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| ||||||||||||||||||| || ||| |||||||| |||||||| ||||||||||||||||| ||||||||| |||||||    
T  27864725 aatacaccctttacatccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagtgtggttgtgagatgaacttaccaaaata 27864626  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||| | |||||||||||||    
T  27864625 tccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcct 27864563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28982761 - 28982923
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||| ||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  28982761 aatacaccttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgcggttgtgagatgaacttaccaaaata 28982860  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||| ||||| ||||||||  ||||||| ||||||||||||||| |||||||||||||    
T  28982861 tccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcct 28982923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 25051845 - 25051692
Alignment:
Q  10 tttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaata 109  Q
    |||||| ||| | |||||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  25051845 tttacatccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaatatccctaata 25051746  T
Q  110 catggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||| |||||||||||| ||||||||||||||| ||||||| || ||||||||||    
T  25051745 catagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcct 25051692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 43949740 - 43949900
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||| ||||||| |||||||||||| ||||||   |||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  43949740 aatacaccctttatacccatacaaaattctgacacgtggcatattggatcccgcacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 43949839  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcacgtaacatttt 160  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| ||| ||||||    
T  43949840 tccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 48463389 - 48463552
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||| ||||||||||||||||||| || ||| |||||||| |||||||| ||||||| ||||||||| ||||||||| |||||||    
T  48463389 aatacaccctttacacccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagtatggttgtgagatgaacttaccaaaata 48463488  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||||||||||||||| ||||||||||  |||| ||||||| |||||| | ||||||||||||||    
T  48463489 tccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttccta 48463552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41878567 - 41878407
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||| | | |||||||||||| ||| ||| ||||||||||||||||||||||| || || ||||||||| |||||||||||||||||    
T  41878567 aatacactctttacaccaacacaaaattctgacacgtgacaatctggaccccacacaaatagaagagaaggtttggttgtgagatgaacttatcaaaata 41878468  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  41878467 tccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43735903 - 43735744
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| |||||||||||||| ||| |||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43735903 aatacaccctttacatccacataaaattctgacacgtgacaacttggatcccacacaaatagaagataaagtgtgattgtgagatgaacttatcaaaata 43735804  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    || |||||||||||  |||| |||||| |||||||||||||| |||||| |||| |||||    
T  43735803 tctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 39631254 - 39631102
Alignment:
Q  9 ctttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||||| | |||||||||||| ||| ||   || ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  39631254 ctttacacccacacaaaattctgacacgtgacatattgaaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaat 39631155  T
Q  109 acatggggtgtacaatgaggtgtaggaat-aaagggtgttcacgtaacatttt 160  Q
    ||||| ||||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  39631154 acatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 27316674 - 27316813
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||| |||||||| ||||| ||| | |||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||| |    
T  27316674 aaaattctgacacgtggcaacttggactccaaataaatagaagataaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtata 27316773  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  27316774 atgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 31681063 - 31680904
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||| | |||||||||||||| ||||||| ||  |||||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  31681063 aatacaccctttacacctacataaaattctgacacgtggcaatctaaaccccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaata 31680964  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||| | |||||||||||||   |||| ||||||| |||||| ||||||||||||    
T  31680963 tccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12497117 - 12496956
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||| | |||||||| ||| |||||||  || ||| |||||||||||||||||||||||| |||| | ||||||||| |||||||    
T  12497117 aatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgtgattgtaagatgaacttaccaaaata 12497018  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    || |||||||||||| |||||||||  ||||||||||||||||||||||  |||||||||||    
T  12497017 tctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 51512226 - 51512323
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgta 120  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| | | ||||||||| ||||||||| |||||||||||||||||    
T  51512226 aaaattctgacacgtggcaacctggaccccacacaaataaaagataaagtgtggttataagatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 45490261 - 45490413
Alignment:
Q  10 tttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaata 109  Q
    |||||||||| | || ||||||||| ||||||||||||| |||  |||||||||||||||||||||||||||| ||||| |||  ||| |||||||||||    
T  45490261 tttacacccacacaagattctgacacgtggcaacctggatcccgtacaaatagaagataaagtgtggttgtgagatgaatttactaaagtatccctaata 45490360  T
Q  110 catggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||||||||  | ||||  ||||||  ||||||| ||||||||||||    
T  45490361 catgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 41848110 - 41847971
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||  ||||| ||  |||||| || ||||| |||||||||||||    
T  41848110 aaaattctgacatgtgacaatctgaaccccacacaaatagaagagaaagtgtggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtaca 41848011  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||  ||| ||||| |||||  ||||||||||||    
T  41848010 atgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 41327482 - 41327641
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| | |||||| || | |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||| ||| ||||||     
T  41327482 aatacaccccttacactcacaaaaaattctaacatgtggcaacctggaccccacacaaattgaagagaaagtgtggatgtgagatgaatttaccaaaatg 41327581  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||| || | |||  ||||||||||| |||||  |||||||||||||  | ||||||||||    
T  41327582 tccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 21687145 - 21687004
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||| ||||||||||| || ||| |||||||||||||||||| ||||| ||| |||||||||  |||||||  |||||||||  | |||| |    
T  21687145 aaaattctgacacgtggcaacctgaactccagacaaatagaagataaagtatggttatgagatgaacttactaaaatatttctaatacataagatgtata 21687046  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    ||| ||||||  |||||||| |||||| ||||||||||||||    
T  21687045 atggggtgtaaaaataaaggatgttcatgtaacattttccta 21687004  T

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Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 46412430 - 46412557
Alignment:
Q  23 aaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtaca 122  Q
    |||||||||||| |||||||  |  |||||||| |||||||||||||||||||||||||| | ||||||| ||||||||| ||||||          | |    
T  46412430 aaaattctgacacgtggcaatttaaaccccacataaatagaagataaagtgtggttgtgagaagaacttaccaaaatatctctaata----------ata 46412519  T
Q  123 atgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  46412520 atgaagtgtaggaataaaaggtgttcacgtaacatttt 46412557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 17619153 - 17619252
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||| |||||||||||||||  |||||| || |||| |||||||| ||||||||||||    
T  17619153 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

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Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 712059 - 711959
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| || |||||| ||||| ||| |||||||||| |||| ||| |||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  712059 aagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 711960  T
Q  163 t 163  Q
    |    
T  711959 t 711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 55272377 - 55272476
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||| |||||||||||||||   ||||| || |||||| |||||| ||||||||||||    
T  55272377 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 56215847 - 56215943
Alignment:
Q  11 ttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaatatccctaat 108  Q
    ||||||||| | ||||||||||||| | ||||||| |||||||||||||||| ||| ||||||||||||||| || || ||  ||||||||| |||||    
T  56215847 ttacacccacacaaaattctgacatatagcaacctagaccccacacaaatag-agagaaagtgtggttgtgagataaattttccaaaatatcgctaat 56215943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 3756279 - 3756344
Alignment:
Q  95 aaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||| |||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||    
T  3756279 aaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 32728456 - 32728355
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| || |||||| ||||| |||  ||||| ||| |||| |||||||||||||||  |||||| || |||||| |||||| ||||||||||||    
T  32728456 aagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 32728357  T
Q  163 ta 164  Q
    ||    
T  32728356 ta 32728355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 48435580 - 48435681
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||||||||| || |||||| ||||| ||| ||| || |||||||| |||||||||||||||  |||||  || |||| |||||||| |||||| |||||    
T  48435580 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 48435679  T
Q  163 ta 164  Q
    ||    
T  48435680 ta 48435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 35037093 - 35037007
Alignment:
Q  74 tggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    ||||||||| ||||| ||| |||||||||| |||| |||||||||||||||   ||||| |  ||||||||| ||| ||||||||||    
T  35037093 tggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 960892 - 960971
Alignment:
Q  84 atgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||| ||| |||||| ||||||||  || |||||||||||   ||||| || ||||||||||||| |||||||||||||    
T  960892 atgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 960971  T

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Target: scaffold0038 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 112816 - 112656
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  112816 aatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 112717  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttc 161  Q
    |||||||||||| ||||||||||||   ||||||||||||||||||||| |||||||||||    
T  112716 tccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14128 - 14290
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||    
T  14128 aatacaccctttacatccacacaaaattctgacacgtggcaacctggaccc-acacaaatagaagataaagtgtggttgtgagatgaacttacaaaaata 14226  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||||||||||| || ||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  14227 tccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttccta 14290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24456 - 24618
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    ||||||| ||||||| ||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||    
T  24456 aatacaccctttacatccacacaaaattctgacacgtggcaacctggaccc-acacaaatagaagataaagtgtggttgtgagatgaacttacaaaaata 24554  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttccta 164  Q
    |||||||||||| || ||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  24555 tccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttccta 24618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11412 - 11250
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||| | | |||||||||||| || ||||| |||||||||||  ||||||||||||||||||||||||| ||||||||| |||||||    
T  11412 aatacactatttacacctacacaaaattctgacacgtagcaacttggaccccacatcaatagaagataaagtgtggttgtgagatgaacttaccaaaata 11313  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcct 163  Q
    ||||||||| ||||||||||||||| |||||| |||||||| ||||||| || ||||||||||    
T  11312 tccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcct 11250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23360 - 23521
Alignment:
Q  1 aatacacactttacacccatataaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgaaatgaacttatcaaaata 100  Q
    |||||||  |||||||||| | |||||||| ||| |||||||  || ||| |||||||||||||||||||||||| |||| | ||||||||| |||||||    
T  23360 aatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgtgattgtaagatgaacttaccaaaata 23459  T
Q  101 tccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    || |||||||||||| |||||||||  ||||||||||||||||||||||  |||||||||||    
T  23460 tctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 45720 - 45817
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacatttt 160  Q
    |||| ||||| ||||||||| ||||| ||| |||||||||| |||||||| || ||||||||  |||||| || ||||||||||||| ||||||||||    
T  45720 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 35457 - 35556
Alignment:
Q  63 aagataaagtgtggttgtgaaatgaacttatcaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcacgtaacattttcc 162  Q
    |||| ||||| ||||||||| ||||| ||| ||| || |||||||| |||||||||||||||  |||||| || |||| |||||| | ||||||||||||    
T  35457 aagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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