View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0768_high_27 (Length: 279)
Name: NF0768_high_27
Description: NF0768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0768_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 50778473 - 50778664
Alignment:
| Q |
32 |
ccaagaatatttaccagcagagttggcgagggtattccaacgaccttcaccatgagtagcaatgtaattcatgagggttaagtcctcatccacggtccaa |
131 |
Q |
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| T |
50778473 |
ccaataatatttaccagcagagttggcgagggtattccaacgaccttcaccatgagtagcaatgtaattcatgagggttaagtcctcatccacggtccaa |
50778572 |
T |
|
| Q |
132 |
ggacctcttctaaggtccatatcatcctcatcactactcataaggttgtttttgttgttgcttcctcttccttttacatccattgattctcc |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50778573 |
ggacctcttctaaggtccatatcatcctcatcactactcataaggttgtttttgttgttgcttcctcttccttttacatccattgattctcc |
50778664 |
T |
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