View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0768_high_40 (Length: 207)

Name: NF0768_high_40
Description: NF0768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0768_high_40
NF0768_high_40
[»] chr2 (7 HSPs)
chr2 (2-207)||(25130286-25130491)
chr2 (2-207)||(22760130-22760335)
chr2 (2-207)||(24829749-24829954)
chr2 (2-207)||(24568229-24568434)
chr2 (29-200)||(22279789-22279960)
chr2 (36-146)||(10037927-10038037)
chr2 (36-146)||(10098312-10098422)
[»] chr1 (7 HSPs)
chr1 (2-207)||(41215949-41216154)
chr1 (2-207)||(20927115-20927320)
chr1 (2-207)||(20829485-20829690)
chr1 (10-174)||(20527147-20527311)
chr1 (8-116)||(22133855-22133963)
chr1 (28-146)||(21200998-21201116)
chr1 (2-69)||(35930918-35930985)
[»] scaffold0610 (1 HSPs)
scaffold0610 (2-207)||(6953-7158)
[»] chr8 (9 HSPs)
chr8 (2-207)||(22436415-22436620)
chr8 (19-207)||(23902276-23902464)
chr8 (2-207)||(23155506-23155709)
chr8 (2-207)||(16875559-16875764)
chr8 (2-207)||(21848801-21849006)
chr8 (2-207)||(20650819-20651024)
chr8 (2-207)||(21195004-21195208)
chr8 (2-108)||(16414302-16414408)
chr8 (14-146)||(19869866-19869998)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-207)||(970-1175)
[»] scaffold0561 (1 HSPs)
scaffold0561 (2-207)||(7029-7234)
[»] scaffold0170 (1 HSPs)
scaffold0170 (2-207)||(34162-34367)
[»] scaffold0021 (3 HSPs)
scaffold0021 (2-207)||(21871-22076)
scaffold0021 (2-207)||(31447-31652)
scaffold0021 (60-207)||(7291-7438)
[»] chr3 (8 HSPs)
chr3 (2-207)||(15611778-15611983)
chr3 (2-207)||(13965612-13965817)
chr3 (2-207)||(15948730-15948935)
chr3 (2-207)||(8272659-8272864)
chr3 (2-207)||(30139481-30139686)
chr3 (2-207)||(30149032-30149237)
chr3 (2-207)||(6151113-6151318)
chr3 (2-207)||(25767993-25768198)
[»] scaffold0302 (2 HSPs)
scaffold0302 (2-207)||(7230-7435)
scaffold0302 (10-207)||(288-485)
[»] chr6 (9 HSPs)
chr6 (2-207)||(1646980-1647185)
chr6 (2-207)||(16380539-16380744)
chr6 (2-207)||(16648135-16648340)
chr6 (2-196)||(23998169-23998363)
chr6 (2-207)||(14130379-14130584)
chr6 (2-204)||(16099922-16100130)
chr6 (2-97)||(23025912-23026007)
chr6 (121-207)||(23026010-23026096)
chr6 (73-146)||(14643721-14643794)
[»] chr7 (9 HSPs)
chr7 (2-204)||(17925688-17925890)
chr7 (2-205)||(4441965-4442168)
chr7 (2-207)||(7825935-7826140)
chr7 (2-207)||(27105804-27106009)
chr7 (2-207)||(27172316-27172521)
chr7 (10-199)||(13458078-13458267)
chr7 (2-146)||(13378981-13379123)
chr7 (18-176)||(15716949-15717107)
chr7 (50-146)||(17143354-17143450)
[»] chr5 (3 HSPs)
chr5 (2-207)||(23507644-23507849)
chr5 (2-207)||(21935391-21935596)
chr5 (2-207)||(24583170-24583375)
[»] scaffold1488 (1 HSPs)
scaffold1488 (2-207)||(827-1031)
[»] scaffold0387 (1 HSPs)
scaffold0387 (2-207)||(16135-16340)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-203)||(7885-8086)
[»] scaffold0225 (1 HSPs)
scaffold0225 (2-207)||(25471-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (2-207)||(11198-11403)
scaffold0162 (2-207)||(14985-15190)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-207)||(26290-26495)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-207)||(42335-42540)
[»] scaffold0467 (1 HSPs)
scaffold0467 (2-207)||(1645-1850)
[»] scaffold0218 (2 HSPs)
scaffold0218 (2-207)||(1976-2181)
scaffold0218 (13-201)||(26410-26598)
[»] scaffold0692 (1 HSPs)
scaffold0692 (2-207)||(1908-2113)
[»] scaffold0120 (1 HSPs)
scaffold0120 (2-207)||(24253-24458)
[»] chr4 (2 HSPs)
chr4 (2-207)||(15291179-15291384)
chr4 (28-203)||(12340912-12341087)
[»] scaffold0124 (1 HSPs)
scaffold0124 (2-207)||(5830-6037)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-207)||(8867-9055)
[»] scaffold0092 (1 HSPs)
scaffold0092 (13-207)||(184-378)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-207)||(132513-132718)
scaffold0008 (10-113)||(25938-26041)
[»] scaffold0369 (1 HSPs)
scaffold0369 (2-140)||(6888-7026)
[»] scaffold0462 (1 HSPs)
scaffold0462 (2-106)||(2117-2221)
[»] scaffold0719 (1 HSPs)
scaffold0719 (24-86)||(4785-4847)
[»] scaffold0635 (1 HSPs)
scaffold0635 (36-146)||(9033-9143)
[»] scaffold0465 (1 HSPs)
scaffold0465 (2-60)||(13649-13707)
[»] scaffold0029 (1 HSPs)
scaffold0029 (100-144)||(114699-114743)
[»] scaffold0730 (1 HSPs)
scaffold0730 (100-144)||(123-167)


Alignment Details
Target: chr2 (Bit Score: 138; Significance: 2e-72; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 25130491 - 25130286
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||  |||| ||||||||  ||||| ||||||| ||| |||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaag 25130292  T
Q  202 tctgag 207  Q
    ||||||    
T  25130291 tctgag 25130286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 22760130 - 22760335
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||  ||| | ||||||||||||| |||||| |||||||||||||||||||||| |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||  |||| ||||||||  ||||| |||||||||||| |||     
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaa 22760329  T
Q  202 tctgag 207  Q
    ||||||    
T  22760330 tctgag 22760335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 24829749 - 24829954
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24829948  T
Q  202 tctgag 207  Q
    ||||||    
T  24829949 tctgag 24829954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 24568229 - 24568434
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||| ||| | ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||  |||||||||||||||| ||||||||||||||||||||||| |  |||||||||||  ||||  |||||||  || || |||||||||||||||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaag 24568428  T
Q  202 tctgag 207  Q
    ||||||    
T  24568429 tctgag 24568434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 22279960 - 22279789
Alignment:
Q  29 atatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatat 128  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||| ||    
T  22279960 atatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacat 22279861  T
Q  129 gaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaa 200  Q
    ||||||||||||| |||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||||||    
T  22279860 gaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaa 22279789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 10037927 - 10038037
Alignment:
Q  36 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaataga 135  Q
    |||||| || || ||||||| |||||| |||||| | || | ||||||| ||||||| ||  | |||||||  ||||||||||||||||| |||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  136 atatttcatcc 146  Q
    || || |||||    
T  10038027 atcttccatcc 10038037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 10098312 - 10098422
Alignment:
Q  36 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaataga 135  Q
    |||||| || || ||||||| |||||| |||||| | || | ||||||| ||||||| ||  | |||||||  ||||||||||||||||| |||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  136 atatttcatcc 146  Q
    || || |||||    
T  10098412 atcttccatcc 10098422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 2e-72; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 41215949 - 41216154
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| ||||| | |||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||  ||||| |||||||||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaag 41216148  T
Q  202 tctgag 207  Q
    ||||||    
T  41216149 tctgag 41216154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 20927320 - 20927115
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||| ||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaag 20927121  T
Q  202 tctgag 207  Q
    ||||||    
T  20927120 tctgag 20927115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 20829485 - 20829690
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 20829684  T
Q  202 tctgag 207  Q
    ||||||    
T  20829685 tctgag 20829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 20527311 - 20527147
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccag 109  Q
    ||||||| |||||| ||||||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  20527311 attagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 20527212  T
Q  110 gtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgttt 174  Q
    ||||||| || ||||| |||||||||||||||||||| |  |||||||||||  |||| ||||||    
T  20527211 gtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttt 20527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 22133855 - 22133963
Alignment:
Q  8 atattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgcc 107  Q
    |||||||||  |||||||||||||||||||| ||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  22133855 atattagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcc 22133954  T
Q  108 aggtgtctt 116  Q
    |||||||||    
T  22133955 aggtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 21200998 - 21201116
Alignment:
Q  28 gatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatata 127  Q
    |||||||||||||| |||||||||||||  ||||| |||||| | |||| ||||||||||||| | ||  | ||| ||||  ||||||||||||||||||    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  128 tgaatagaatatttcatcc 146  Q
    |||||||||||||||||||    
T  21201098 tgaatagaatatttcatcc 21201116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 35930918 - 35930985
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactat 69  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactat 35930985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 6953 - 7158
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| |||||||||||||| || |||||||||| |||||||||||| |  ||||||||||| ||||| |||||||| |||||| |||||||||||| ||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaag 7152  T
Q  202 tctgag 207  Q
    ||||||    
T  7153 tctgag 7158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 6e-70; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 22436620 - 22436415
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||||||  ||||| |||||||||||||||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 22436421  T
Q  202 tctgag 207  Q
    ||||||    
T  22436420 tctgag 22436415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 23902464 - 23902276
Alignment:
Q  19 aaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttca 118  Q
    |||| |||||||||||||||||||||||||| ||||| | ||||||||||| |||||| ||||||||||||||||||||||||||| | |||||||||||    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  119 tggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaagtctgag 207  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgag 23902276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 23155506 - 23155709
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||   |||||| ||||||||||||||||| | ||||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactg--agtattctgtgatgccatttggagcacccaa 23155603  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |   ||||||||||  |||| ||||||||  ||||| |||| ||||||||||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaag 23155703  T
Q  202 tctgag 207  Q
    ||||||    
T  23155704 tctgag 23155709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 16875559 - 16875764
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16875758  T
Q  202 tctgag 207  Q
    ||||||    
T  16875759 tctgag 16875764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 21848801 - 21849006
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  |||||| |||||||||||||||| ||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21849000  T
Q  202 tctgag 207  Q
    ||||||    
T  21849001 tctgag 21849006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 20650819 - 20651024
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||||||||| || |||||||||||||||||| |||| |  |||||||||||  | || ||||| ||  ||||| ||||||||||||||||     
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaa 20651018  T
Q  202 tctgag 207  Q
    ||||||    
T  20651019 tctgag 20651024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 21195004 - 21195208
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||||| |||||||||||  ||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    || |||||||  ||||||||||||||||||||||||||||||||| |  |||||||||||  |||| || |||||  ||| | ||||||||||||||||     
T  21195104 tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaa 21195202  T
Q  202 tctgag 207  Q
    ||||||    
T  21195203 tctgag 21195208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||| |||||  ||||  |||||||||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| |||||||    
T  16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa 16414309  T
Q  102 tgcgcca 108  Q
    |||||||    
T  16414308 tgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 19869998 - 19869866
Alignment:
Q  14 gagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgt 113  Q
    |||||||| ||||||||||||| || || || ||| ||||    ||||| || ||| ||||||  |||||||| |||||||| ||||| |||||||| ||    
T  19869998 gagcgaagtcggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagt 19869899  T
Q  114 cttcatggaatatatgaatagaatatttcatcc 146  Q
     || ||||| |||||||| ||||| || |||||    
T  19869898 gtttatggagtatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 970 - 1175
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||| | ||||||  ||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||| ||||| ||||||||  ||||| |||||||||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaag 1169  T
Q  202 tctgag 207  Q
    ||||||    
T  1170 tctgag 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 7029 - 7234
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||  ||||| ||||||||||||||||||||||||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |   ||||||||||  |||| ||||||||  ||||| ||||||||||||||||     
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 7228  T
Q  202 tctgag 207  Q
    ||||||    
T  7229 tctgag 7234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 34367 - 34162
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 34168  T
Q  202 tctgag 207  Q
    ||||||    
T  34167 tctgag 34162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 130; Significance: 1e-67; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 21871 - 22076
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||  |||| || |||||  ||||| |||||||||||||||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 22070  T
Q  202 tctgag 207  Q
    | ||||    
T  22071 tttgag 22076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 31447 - 31652
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||  |||| || |||||  ||||| |||||||||||||||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 31646  T
Q  202 tctgag 207  Q
    | ||||    
T  31647 tttgag 31652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 7438 - 7291
Alignment:
Q  60 tggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgt 159  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| |  ||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  160 ttcatggtagtgtttatcaatgatgttttggtgtattcgaagtctgag 207  Q
    ||  |||| | ||| ||  ||||| ||||||| |||||||| ||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgag 7291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 1e-67; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 15611983 - 15611778
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 15611784  T
Q  202 tctgag 207  Q
    ||||||    
T  15611783 tctgag 15611778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 13965612 - 13965817
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 13965811  T
Q  202 tctgag 207  Q
    ||||||    
T  13965812 tctgag 13965817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 15948730 - 15948935
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |   ||||||| ||  |||| || || ||  ||||| |||||||||||||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaag 15948929  T
Q  202 tctgag 207  Q
    ||||||    
T  15948930 tctgag 15948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 8272659 - 8272864
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 8272858  T
Q  202 tctgag 207  Q
    ||||||    
T  8272859 tctgag 8272864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 30139686 - 30139481
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30139487  T
Q  202 tctgag 207  Q
    ||||||    
T  30139486 tctgag 30139481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 30149237 - 30149032
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30149038  T
Q  202 tctgag 207  Q
    ||||||    
T  30149037 tctgag 30149032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 6151113 - 6151318
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||| ||||||||||||||||| | ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||| |  || ||||||||  |||| ||||||||  ||||| ||||||||||||||||     
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 6151312  T
Q  202 tctgag 207  Q
    ||||||    
T  6151313 tctgag 6151318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 25768198 - 25767993
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| ||| || || |||||||||||||||||||||| ||| | ||||||||||||| |||||| |||||||||||| |||||||| ||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||  |||| ||||||||  ||||| ||||||||||||| ||     
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaa 25767999  T
Q  202 tctgag 207  Q
    ||||||    
T  25767998 tctgag 25767993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 7435 - 7230
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||| || |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||||||  ||||| |||||||||||||||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 7236  T
Q  202 tctgag 207  Q
    ||||||    
T  7235 tctgag 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 485 - 288
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccag 109  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||    
T  485 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccag 386  T
Q  110 gtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaagtctgag 207  Q
    |||| || |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||||||  ||||| |||||||||||||||||||||||    
T  385 gtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgag 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 1646980 - 1647185
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||  |||||||||||||||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaag 1647179  T
Q  202 tctgag 207  Q
    | ||||    
T  1647180 tttgag 1647185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 16380539 - 16380744
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16380738  T
Q  202 tctgag 207  Q
    ||||||    
T  16380739 tctgag 16380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 16648135 - 16648340
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16648334  T
Q  202 tctgag 207  Q
    ||||||    
T  16648335 tctgag 16648340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 23998363 - 23998169
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtatt 196  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtatt 23998169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 14130584 - 14130379
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||| |||||||| |||||||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    || || ||||||||||||||||||||||||||||| ||||||||| |   ||||||||||  |||| |||||||   ||||| |||||||||||||||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaag 14130385  T
Q  202 tctgag 207  Q
    | ||||    
T  14130384 tttgag 14130379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 16100130 - 16099922
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||| || ||||||||||||||||||||||||  |||| ||||||| ||||||||||||| |||||||||| |||||||||||||| || ||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  102 tgcgccaggtg------tcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtat 195  Q
    || ||||||||      |||| ||||| ||||||||||||||||||||||| |   ||||||||||  |||| ||||||||  |||||  ||||||||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtat 16099931  T
Q  196 tcgaagtct 204  Q
    |||||||||    
T  16099930 tcgaagtct 16099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtat 97  Q
    ||||||| ||||||| ||||||||||||||||||||||||  |||  ||||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 23026010 - 23026096
Alignment:
Q  121 gaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaagtctgag 207  Q
    |||||||||||||||||||||||||| ||  || |||||||  |||| ||||||||  ||||| |||||||||||| ||||||||||    
T  23026010 gaatatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaagtctgag 23026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 14643721 - 14643794
Alignment:
Q  73 tattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaatagaatatttcatcc 146  Q
    |||| ||||||||||||||| ||  |  ||||||  ||||||||||||||||||||||||||||| || |||||    
T  14643721 tattctgtgatgccatttggtgttactgatgcgcatggtgtcttcatggaatatatgaatagaatcttccatcc 14643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 17925890 - 17925688
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||| |||| || ||||||||||||| |||||| ||||||||||||||||||||||||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||  |||| ||||||||  || || ||||||| ||||| |||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaag 17925691  T
Q  202 tct 204  Q
    |||    
T  17925690 tct 17925688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 4442168 - 4441965
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||  ||| ||||| ||||||  |||||| |||||||||||| |||||||||||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||||  |||| ||||||||  ||||| |||||||||||||||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 4441969  T
Q  202 tctg 205  Q
    ||||    
T  4441968 tctg 4441965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 7826140 - 7825935
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 7825941  T
Q  202 tctgag 207  Q
    ||||||    
T  7825940 tctgag 7825935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 27105804 - 27106009
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27106003  T
Q  202 tctgag 207  Q
    ||||||    
T  27106004 tctgag 27106009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 27172521 - 27172316
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27172322  T
Q  202 tctgag 207  Q
    ||||||    
T  27172321 tctgag 27172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 13458267 - 13458078
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccag 109  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  13458267 attagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaatgcgccag 13458168  T
Q  110 gtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcga 199  Q
    ||||||||||||||||||||||||||| ||| ||||| || | ||| |||||  |||| ||||||||| ||||| |||||||||||||||    
T  13458167 gtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcga 13458078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 13379123 - 13378981
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||||||| |||||||||||   |||||| ||||||||||||||||||||||||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactg--agtattctgtgatgccatttggagtatccaa 13379026  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcc 146  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatcc 13378981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 15716949 - 15717107
Alignment:
Q  18 gaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttc 117  Q
    ||||||||| |||||||||||||| ||||||||||| |  ||||| |||||| | |||| ||| |||||||||||  || | |||| |||  ||||||||    
T  15716949 gaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttc 15717048  T
Q  118 atggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttat 176  Q
    ||||||||||||||||||||||| ||||| || |||||||  ||  |||||||||||||    
T  15717049 atggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttat 15717107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 17143354 - 17143450
Alignment:
Q  50 gaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaatagaatatttcatcc 146  Q
    |||||| ||||||||||||| | |||| || |||| ||||||| ||  | ||| |||| ||||||||||||||||||||||||||||| || |||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcc 17143450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 9e-63; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 23507849 - 23507644
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 23507650  T
Q  202 tctgag 207  Q
    ||||||    
T  23507649 tctgag 23507644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 21935391 - 21935596
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21935590  T
Q  202 tctgag 207  Q
    ||||||    
T  21935591 tctgag 21935596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 24583375 - 24583170
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  |||||  |||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24583176  T
Q  202 tctgag 207  Q
    | ||||    
T  24583175 tttgag 24583170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 827 - 1031
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| | ||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |   |||||| |||  |||| ||||||||  |||||  ||||||||||||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgat-atttggtgtattcgaag 1025  T
Q  202 tctgag 207  Q
    ||||||    
T  1026 tctgag 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 16340 - 16135
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||  ||| |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||||||||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||| ||||||||||||||||||| ||||||||||||||||| || |  |||||||||||  ||||  |||||||  ||||| |||||||||||||||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaag 16141  T
Q  202 tctgag 207  Q
    ||||||    
T  16140 tctgag 16135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 203
Target Start/End: Original strand, 7885 - 8086
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  |||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||||||  ||||| |||| ||||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaag 8084  T
Q  202 tc 203  Q
    ||    
T  8085 tc 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 25676 - 25471
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 25477  T
Q  202 tctgag 207  Q
    ||||||    
T  25476 tctgag 25471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 11198 - 11403
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||| | |||||||||||||||| || ||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 11397  T
Q  202 tctgag 207  Q
    ||||||    
T  11398 tctgag 11403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 15190 - 14985
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 14991  T
Q  202 tctgag 207  Q
    ||||||    
T  14990 tctgag 14985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 26290 - 26495
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||||||  ||||||  ||||||||| |||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 26489  T
Q  202 tctgag 207  Q
    ||||||    
T  26490 tctgag 26495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 42540 - 42335
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 42341  T
Q  202 tctgag 207  Q
    ||||||    
T  42340 tctgag 42335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 1645 - 1850
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||| |||||| |||||||||||||||||||||| | ||||||| ||||| ||||||  || |||||||||||||| |||||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||||||  |||| ||||||||  ||||| |||||||||||||||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 1844  T
Q  202 tctgag 207  Q
    ||||||    
T  1845 tctgag 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 1976 - 2181
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||||| |||||| ||||||||||||||||||||| ||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||| |  ||||||| |||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaag 2175  T
Q  202 tctgag 207  Q
    ||||||    
T  2176 tctgag 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 26598 - 26410
Alignment:
Q  13 agagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtg 112  Q
    |||| ||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |||||| ||||||| ||||| ||||||| |||||||||||||    
T  26598 agagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtg 26499  T
Q  113 tcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||  ||||  |||||||  ||||  |||||||||||||||||    
T  26498 tcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaag 26410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 1908 - 2113
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||  |||||||||||||||||||| ||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||| |  |||||| ||||  |||| ||||| ||  ||||| ||||||||||||||||     
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaa 2107  T
Q  202 tctgag 207  Q
    ||||||    
T  2108 tctgag 2113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 24458 - 24253
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||| |||||||||  |||| ||||||||||||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| ||||||| ||||||||     
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaa 24259  T
Q  202 tctgag 207  Q
    ||||||    
T  24258 tctgag 24253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 15291179 - 15291384
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||| |  ||||||| |||  |||| ||||| ||  ||||| ||||||||||||| |||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaag 15291378  T
Q  202 tctgag 207  Q
    ||||||    
T  15291379 tctgag 15291384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 28 - 203
Target Start/End: Original strand, 12340912 - 12341087
Alignment:
Q  28 gatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatata 127  Q
    ||||||||||||||||||||||||||   | ||||||||||| |||||| ||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  128 tgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaagtc 203  Q
    ||||||| ||||| ||||| || |||||| ||||  ||||| | |||||| ||||| | || |||||| |||||||    
T  12341012 tgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtc 12341087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 5830 - 6037
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  102 tgcgccaggtgtcttca-tggaatatatgaat-agaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcga 199  Q
    ||||||||||||||| | || |||| |||||| |||||||||||||| |  |||||||||||  |||| ||||| ||  ||||| |||||||||||||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcga 6029  T
Q  200 agtctgag 207  Q
    ||||||||    
T  6030 agtctgag 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 8867 - 9055
Alignment:
Q  19 aaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttca 118  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| |    
T  8867 aaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtcttta 8966  T
Q  119 tggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaagtctgag 207  Q
    ||| ||| |||||||||||||||||||| |  ||||| |||||  || | ||||| ||  ||||| ||||||||||||| |||||||||    
T  8967 tgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaagtctgag 9055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 378 - 184
Alignment:
Q  13 agagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtg 112  Q
    |||| |||||||||| |||||||||||| |||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  113 tcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaagtctgag 207  Q
    ||||||| || ||||||||||||||||||||||| |  ||| || ||||  |||| ||||||||  ||||| |||||| ||||| ||| ||||||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgag 184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 94; Significance: 4e-46; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 132513 - 132718
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  ||||| |||||||||||| ||||||||||||||||||  |||||||||||| |||| | ||||||||||||||||||||| ||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatcccttcctggaccgtttcatggtagtgtttatcaatgatgttttggtgtattcgaag 201  Q
    |||||| |||||||| |||||||| ||||||||||||||| |||| |  |||||| ||||  |||| || |||||  ||||| |||| ||||||||||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaag 132712  T
Q  202 tctgag 207  Q
    | ||||    
T  132713 tttgag 132718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 26041 - 25938
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccag 109  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||| |||||| |||||||||||    
T  26041 attagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaatgcgccag 25942  T
Q  110 gtgt 113  Q
    ||||    
T  25941 gtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| |||||||  |||||||||||||||| ||||||  |||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  102 tgcgccaggtgtcttcatggaatatatgaatagaatatt 140  Q
    ||| ||||||||||| |||||||| ||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  102 tgcgc 106  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  24 ggaagatatatccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgcc 86  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||| | |||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 9143 - 9033
Alignment:
Q  36 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaataga 135  Q
    |||||| || || ||||||| |||||| |||||| | || | ||||||| ||||||| ||  | |||||||  ||||||||||||||||| |||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  136 atatttcatcc 146  Q
    || || |||||    
T  9043 atcttccatcc 9033  T

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Target: scaffold0465 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgacgtat 60  Q
    ||||||| |||| || ||||||  |||||||||||||||||||||||||||||| ||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 114743 - 114699
Alignment:
Q  100 aatgcgccaggtgtcttcatggaatatatgaatagaatatttcat 144  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||    
T  114743 aatgcgcctggtgtgttcatggaatatatgaatagaatttttcat 114699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 123 - 167
Alignment:
Q  100 aatgcgccaggtgtcttcatggaatatatgaatagaatatttcat 144  Q
    |||||||| ||||| |||||||| |||||||||||||| ||||||    
T  123 aatgcgcctggtgtgttcatggagtatatgaatagaatttttcat 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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