View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0768_low_31 (Length: 349)

Name: NF0768_low_31
Description: NF0768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0768_low_31
NF0768_low_31
[»] chr5 (17 HSPs)
chr5 (151-277)||(23112977-23113103)
chr5 (151-277)||(22335918-22336044)
chr5 (151-277)||(22339456-22339582)
chr5 (151-277)||(41878226-41878352)
chr5 (151-277)||(9775278-9775404)
chr5 (151-281)||(28371661-28371793)
chr5 (155-277)||(42959895-42960019)
chr5 (155-277)||(22749566-22749690)
chr5 (155-277)||(37599533-37599657)
chr5 (151-277)||(38145992-38146119)
chr5 (155-268)||(19510843-19510958)
chr5 (155-269)||(22232851-22232967)
chr5 (156-278)||(34828841-34828966)
chr5 (156-268)||(6728470-6728584)
chr5 (156-268)||(22008134-22008248)
chr5 (158-270)||(6404709-6404822)
chr5 (155-269)||(21888383-21888501)
[»] chr7 (29 HSPs)
chr7 (151-277)||(146878-147004)
chr7 (151-277)||(29795541-29795667)
chr7 (151-277)||(29799360-29799486)
chr7 (155-281)||(16007897-16008025)
chr7 (155-277)||(14565523-14565645)
chr7 (151-277)||(23666067-23666193)
chr7 (155-277)||(15166587-15166711)
chr7 (155-277)||(14421167-14421291)
chr7 (151-277)||(18871675-18871803)
chr7 (155-269)||(16109281-16109397)
chr7 (155-277)||(11302668-11302789)
chr7 (155-269)||(833161-833276)
chr7 (155-269)||(1198341-1198456)
chr7 (155-268)||(3289995-3290110)
chr7 (155-269)||(837158-837272)
chr7 (155-269)||(1202338-1202452)
chr7 (155-269)||(15437831-15437947)
chr7 (155-269)||(46348968-46349084)
chr7 (156-268)||(14946052-14946166)
chr7 (156-268)||(15373645-15373759)
chr7 (155-269)||(12547008-12547123)
chr7 (155-281)||(10897419-10897545)
chr7 (155-269)||(14582874-14582991)
chr7 (155-230)||(16188012-16188088)
chr7 (158-269)||(45185295-45185409)
chr7 (165-230)||(14320854-14320920)
chr7 (165-270)||(14281852-14281960)
chr7 (155-192)||(16074262-16074299)
chr7 (165-270)||(11220320-11220426)
[»] chr6 (14 HSPs)
chr6 (151-277)||(12941611-12941737)
chr6 (151-277)||(4476174-4476302)
chr6 (155-277)||(28290447-28290568)
chr6 (155-269)||(17413840-17413956)
chr6 (156-267)||(19818752-19818865)
chr6 (156-270)||(14616479-14616595)
chr6 (155-269)||(24412512-24412629)
chr6 (165-270)||(8760641-8760748)
chr6 (156-268)||(2708218-2708336)
chr6 (165-270)||(19588790-19588894)
chr6 (156-201)||(14582136-14582181)
chr6 (165-268)||(14724225-14724331)
chr6 (155-269)||(22798736-22798853)
chr6 (165-230)||(31250114-31250180)
[»] chr3 (27 HSPs)
chr3 (151-277)||(12304560-12304686)
chr3 (151-277)||(14764370-14764496)
chr3 (151-277)||(9532660-9532786)
chr3 (155-281)||(20249372-20249500)
chr3 (151-277)||(3802348-3802474)
chr3 (155-277)||(38312390-38312513)
chr3 (155-269)||(11305987-11306103)
chr3 (151-277)||(23372116-23372244)
chr3 (151-277)||(51299911-51300039)
chr3 (155-269)||(18136531-18136647)
chr3 (155-277)||(29545392-29545516)
chr3 (155-269)||(12202170-12202286)
chr3 (151-269)||(54900325-54900445)
chr3 (155-269)||(2270477-2270593)
chr3 (179-269)||(23173656-23173748)
chr3 (169-269)||(18130017-18130119)
chr3 (157-268)||(11965112-11965225)
chr3 (155-269)||(17495965-17496081)
chr3 (155-230)||(12356258-12356333)
chr3 (155-230)||(12362807-12362882)
chr3 (165-270)||(17199248-17199356)
chr3 (155-269)||(14569632-14569749)
chr3 (155-205)||(18130121-18130171)
chr3 (156-270)||(19443324-19443440)
chr3 (165-281)||(12034583-12034700)
chr3 (181-269)||(18719349-18719439)
chr3 (165-230)||(12961652-12961714)
[»] chr4 (19 HSPs)
chr4 (151-277)||(15533597-15533723)
chr4 (151-251)||(36037330-36037430)
chr4 (155-269)||(30146623-30146739)
chr4 (155-269)||(14047876-14047992)
chr4 (155-269)||(2585384-2585497)
chr4 (155-269)||(16484443-16484558)
chr4 (155-270)||(14556296-14556412)
chr4 (156-268)||(41529295-41529409)
chr4 (156-257)||(16221083-16221186)
chr4 (209-277)||(14910452-14910522)
chr4 (156-270)||(16156477-16156594)
chr4 (165-268)||(14062770-14062875)
chr4 (156-270)||(16152331-16152448)
chr4 (165-229)||(15324739-15324803)
chr4 (155-272)||(15546402-15546524)
chr4 (155-204)||(40908435-40908484)
chr4 (155-232)||(15005234-15005313)
chr4 (165-270)||(26077920-26078026)
chr4 (155-269)||(13899845-13899961)
[»] chr2 (15 HSPs)
chr2 (151-277)||(10685864-10685990)
chr2 (151-277)||(20260635-20260761)
chr2 (151-277)||(19663064-19663192)
chr2 (151-281)||(6261782-6261914)
chr2 (155-277)||(9241146-9241270)
chr2 (155-268)||(6482165-6482280)
chr2 (155-268)||(6485632-6485747)
chr2 (169-278)||(26883979-26884091)
chr2 (155-230)||(22796929-22797004)
chr2 (155-270)||(23290778-23290895)
chr2 (165-270)||(20723896-20724002)
chr2 (165-270)||(22809745-22809852)
chr2 (165-281)||(27211215-27211333)
chr2 (165-229)||(19703732-19703796)
chr2 (155-269)||(20914558-20914676)
[»] chr1 (22 HSPs)
chr1 (155-281)||(16371350-16371478)
chr1 (155-277)||(20438771-20438895)
chr1 (155-269)||(29534785-29534901)
chr1 (155-269)||(32649948-32650064)
chr1 (157-270)||(16883755-16883870)
chr1 (156-268)||(20824562-20824676)
chr1 (155-269)||(19666951-19667066)
chr1 (155-269)||(11141221-11141337)
chr1 (155-269)||(19859011-19859127)
chr1 (156-268)||(20838381-20838495)
chr1 (155-269)||(19852876-19852992)
chr1 (155-252)||(20942087-20942188)
chr1 (155-269)||(23630791-23630908)
chr1 (156-270)||(19778668-19778784)
chr1 (155-269)||(23712310-23712428)
chr1 (155-269)||(21697970-21698087)
chr1 (155-269)||(21999837-21999954)
chr1 (155-269)||(22040905-22041022)
chr1 (155-269)||(21664004-21664121)
chr1 (155-269)||(30491655-30491772)
chr1 (155-269)||(41311983-41312100)
chr1 (155-269)||(31927644-31927762)
[»] scaffold0026 (2 HSPs)
scaffold0026 (151-277)||(110002-110130)
scaffold0026 (165-270)||(124685-124792)
[»] scaffold0124 (1 HSPs)
scaffold0124 (151-277)||(37057-37185)
[»] chr8 (17 HSPs)
chr8 (155-277)||(8729252-8729376)
chr8 (155-268)||(44476080-44476195)
chr8 (155-268)||(44479342-44479457)
chr8 (155-277)||(27942413-27942537)
chr8 (155-270)||(19988403-19988521)
chr8 (155-270)||(21300390-21300506)
chr8 (158-269)||(16259360-16259475)
chr8 (156-270)||(21322469-21322585)
chr8 (156-270)||(21327057-21327173)
chr8 (165-269)||(20974238-20974344)
chr8 (165-270)||(41009667-41009773)
chr8 (156-267)||(22025802-22025912)
chr8 (156-267)||(22063805-22063915)
chr8 (165-217)||(22176164-22176216)
chr8 (155-269)||(22743538-22743656)
chr8 (156-268)||(1264057-1264170)
chr8 (165-230)||(10606781-10606847)
[»] scaffold0544 (1 HSPs)
scaffold0544 (151-277)||(3089-3217)
[»] scaffold0001 (2 HSPs)
scaffold0001 (155-269)||(95694-95810)
scaffold0001 (165-278)||(494196-494312)
[»] scaffold0011 (5 HSPs)
scaffold0011 (155-272)||(146852-146971)
scaffold0011 (155-270)||(197654-197770)
scaffold0011 (156-268)||(258345-258459)
scaffold0011 (155-269)||(251729-251845)
scaffold0011 (155-277)||(56979-57103)
[»] scaffold0106 (3 HSPs)
scaffold0106 (155-270)||(46972-47089)
scaffold0106 (155-270)||(51245-51362)
scaffold0106 (155-211)||(36016-36072)
[»] scaffold0407 (1 HSPs)
scaffold0407 (155-270)||(4574-4691)
[»] scaffold0348 (2 HSPs)
scaffold0348 (155-270)||(1940-2057)
scaffold0348 (165-225)||(13732-13791)
[»] scaffold0072 (1 HSPs)
scaffold0072 (156-268)||(55762-55876)
[»] scaffold0342 (1 HSPs)
scaffold0342 (156-270)||(17101-17217)
[»] scaffold0126 (1 HSPs)
scaffold0126 (156-254)||(38195-38295)
[»] scaffold0061 (1 HSPs)
scaffold0061 (155-269)||(57448-57564)
[»] scaffold0017 (2 HSPs)
scaffold0017 (155-269)||(141069-141185)
scaffold0017 (155-211)||(2979-3035)
[»] scaffold0077 (2 HSPs)
scaffold0077 (156-265)||(24010-24121)
scaffold0077 (155-270)||(18380-18496)
[»] scaffold0243 (1 HSPs)
scaffold0243 (155-270)||(8242-8360)
[»] scaffold0008 (1 HSPs)
scaffold0008 (156-268)||(29398-29513)
[»] scaffold0556 (2 HSPs)
scaffold0556 (155-221)||(5225-5291)
scaffold0556 (155-269)||(10743-10860)
[»] scaffold0664 (1 HSPs)
scaffold0664 (156-254)||(8276-8376)
[»] scaffold0192 (1 HSPs)
scaffold0192 (155-270)||(6441-6557)
[»] scaffold0022 (2 HSPs)
scaffold0022 (155-270)||(38913-39029)
scaffold0022 (155-270)||(136973-137089)
[»] scaffold0377 (1 HSPs)
scaffold0377 (165-270)||(7115-7223)
[»] scaffold0097 (1 HSPs)
scaffold0097 (165-270)||(27725-27831)
[»] scaffold0309 (1 HSPs)
scaffold0309 (156-230)||(20650-20724)
[»] scaffold0506 (1 HSPs)
scaffold0506 (156-270)||(8265-8381)
[»] scaffold0015 (1 HSPs)
scaffold0015 (165-270)||(172021-172131)
[»] scaffold0924 (2 HSPs)
scaffold0924 (155-269)||(2085-2201)
scaffold0924 (155-269)||(183-300)
[»] scaffold1853 (1 HSPs)
scaffold1853 (155-270)||(1021-1139)
[»] scaffold0574 (1 HSPs)
scaffold0574 (151-270)||(6116-6238)
[»] scaffold0304 (1 HSPs)
scaffold0304 (155-269)||(239-356)
[»] scaffold0034 (2 HSPs)
scaffold0034 (160-270)||(6892-7003)
scaffold0034 (158-230)||(774-846)
[»] scaffold0004 (2 HSPs)
scaffold0004 (156-270)||(320915-321031)
scaffold0004 (156-230)||(326624-326698)
[»] scaffold1290 (1 HSPs)
scaffold1290 (158-269)||(1493-1607)
[»] scaffold0203 (2 HSPs)
scaffold0203 (165-269)||(2548-2659)
scaffold0203 (165-269)||(17304-17415)
[»] scaffold0074 (1 HSPs)
scaffold0074 (165-204)||(16797-16836)
[»] scaffold0023 (1 HSPs)
scaffold0023 (170-229)||(157018-157077)
[»] scaffold0720 (1 HSPs)
scaffold0720 (165-230)||(4457-4523)
[»] scaffold0610 (1 HSPs)
scaffold0610 (155-225)||(5361-5431)
[»] scaffold0434 (1 HSPs)
scaffold0434 (155-269)||(1581-1698)
[»] scaffold0167 (1 HSPs)
scaffold0167 (155-269)||(19640-19756)
[»] scaffold0081 (1 HSPs)
scaffold0081 (155-269)||(56170-56287)
[»] scaffold0301 (1 HSPs)
scaffold0301 (165-269)||(13630-13733)
[»] scaffold0244 (2 HSPs)
scaffold0244 (155-269)||(9360-9478)
scaffold0244 (155-269)||(13433-13551)
[»] scaffold0108 (1 HSPs)
scaffold0108 (198-269)||(45382-45454)
[»] scaffold0025 (1 HSPs)
scaffold0025 (165-204)||(70947-70986)
[»] scaffold0324 (1 HSPs)
scaffold0324 (155-269)||(7355-7471)
[»] scaffold0007 (1 HSPs)
scaffold0007 (155-269)||(208010-208127)
[»] scaffold0323 (1 HSPs)
scaffold0323 (165-230)||(7115-7179)
[»] scaffold0222 (1 HSPs)
scaffold0222 (166-199)||(5289-5322)
[»] scaffold0076 (1 HSPs)
scaffold0076 (165-229)||(51951-52015)


Alignment Details
Target: chr5 (Bit Score: 119; Significance: 9e-61; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 23113103 - 23112977
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113103 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 23113004  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  23113003 caacaacgactcatgcaacaactcgac 23112977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 22335918 - 22336044
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335918 taactcatcaattaaatctaacaccctgtcataataacaattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 22336017  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  22336018 caacaacgactcatgcaacaactcgac 22336044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 22339456 - 22339582
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22339456 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtaaatcatcattaacaacatcaaccaaatgataattaaaaccaa 22339555  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  22339556 caacaacgactcatgcaacaactcgac 22339582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 41878352 - 41878226
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878352 taactcatcaattaaatctatcaccctgtcataaaaataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 41878253  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  41878252 caacaacgactcatgcaacaactcgac 41878226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 9775278 - 9775404
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9775278 taactcaccaattaaatatatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 9775377  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    ||||||||| |||||||||||| ||||    
T  9775378 caacgacgattcatgcaacaactcgac 9775404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 28371793 - 28371661
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  28371793 taactcatcaattaaatctaacaccctgtcataataataatttatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 28371694  T
Q  249 aacaacgacgactcatgcaacaacccgacttca 281  Q
    |||||||||||||||||  ||||||||||||||    
T  28371693 aacaacgacgactcatgtgacaacccgacttca 28371661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 42959895 - 42960019
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  42959895 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 42959994  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||||||||||| ||||    
T  42959995 acaacgactcatgcaacaactcgac 42960019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 22749566 - 22749690
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  22749566 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 22749665  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||| ||||||| ||||    
T  22749666 acaacgactcatacaacaactcgac 22749690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 37599657 - 37599533
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  37599657 tcatcaattaaatctaacaccctgtcataataataattcatcaatatagaagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 37599558  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||||||||||| ||||    
T  37599557 acaacgactcatgcaacaactcgac 37599533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 38146119 - 38145992
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  38146119 taactcatcaattaaatctaacaccctatcataataataattcatcaatatataagtatatcatcattaacaacatcacccaattgataattaaaaccaa 38146020  T
Q  251 ca-acgacgactcatgcaacaacccgac 277  Q
    ||   |||||||||||||||||| ||||    
T  38146019 cacgggacgactcatgcaacaactcgac 38145992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 19510843 - 19510958
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  19510843 tcatcaattaaatctaacatcctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 19510942  T
Q  253 acgacgactcatgcaa 268  Q
    || |||||||||||||    
T  19510943 acaacgactcatgcaa 19510958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 22232967 - 22232851
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||| |||||||||||||||    
T  22232967 tcatcaattgaatctaacaccctatcataataataattcatcaatatataaaaatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 22232868  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  22232867 acatcgactcatgcaac 22232851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 34828841 - 34828966
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaa-caacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||| | ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||||| |||||||||    
T  34828841 catcaaatgaatctaacaccctatcatcataataattcatcaatatatatgtatatcatcattaatcaacatcaacaacaaatggtaatttaaaccaaca 34828940  T
Q  253 acgacgactcatgcaacaacccgact 278  Q
    || ||||||||||||||||| |||||    
T  34828941 acaacgactcatgcaacaactcgact 34828966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 6728584 - 6728470
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| |||||||||| || |||||||||||||||||||| |||||   |||||||||||| |||| |||||  |||||||||||||||||||||||    
T  6728584 catcaattgaatctaacactctatcataataataattcatcaacatatataaatatcatcattatcaacgtcaacaacaaatgataattaaaaccaacaa 6728485  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  6728484 catcgactcatgcaa 6728470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 22008248 - 22008134
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| ||| |||||||||||||||| |||||   |||||||||||| ||||||||||  ||||||| | |||||||||||||    
T  22008248 catcaattgaatctaacaccctatcaaaataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatgacatttaaaaccaacaa 22008149  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  22008148 catcgactcatgcaa 22008134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 6404822 - 6404709
Alignment:
Q  158 tcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacg 255  Q
    |||||| ||||||| ||||| ||||||||| ||||||||||||||||   |||||||||||| ||||||||||  |||||| |||||||||||||| ||     
T  6404822 tcaattgaatctaagaccctatcataataacaattcatcaatatatataaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaac-aca 6404724  T
Q  256 acgactcatgcaaca 270  Q
     ||||||||||||||    
T  6404723 ccgactcatgcaaca 6404709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 21888383 - 21888501
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatca--accaaatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| |||||||||||||  |  || || |||||  ||||||    
T  21888383 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattaacaacatcatcaataagtggtaatttcaaccaa 21888482  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  21888483 caacaacgactcatgcaac 21888501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 146878 - 147004
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146878 taactcatcaattaaatctaacaccctatcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 146977  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  146978 caacaacgactcatgcaacaactcgac 147004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 29795541 - 29795667
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29795541 taactcatcaattaaatatatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 29795640  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    ||||||||| |||||||||||| ||||    
T  29795641 caacgacgattcatgcaacaactcgac 29795667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 29799360 - 29799486
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29799360 taactcatcaattaaatatatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 29799459  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    ||||||||| |||||||||||| ||||    
T  29799460 caacgacgattcatgcaacaactcgac 29799486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 16007897 - 16008025
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  16007897 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 16007996  T
Q  253 acgacgactcatgcaacaacccgacttca 281  Q
    || ||||||||||||||||||||||||||    
T  16007997 acaacgactcatgcaacaacccgacttca 16008025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 14565523 - 14565645
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaacaac 254  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14565523 tcatcaattaaatctaacaccctgacataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaacaac 14565622  T
Q  255 gacgactcatgcaacaacccgac 277  Q
     ||||||||||| ||||| ||||    
T  14565623 aacgactcatgccacaactcgac 14565645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 23666193 - 23666067
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23666193 taactcaccaattaaatatatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 23666094  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    ||||||||| |||||||||||| ||||    
T  23666093 caacgacgattcatgcaacaactcgac 23666067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 15166587 - 15166711
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  15166587 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 15166686  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    |||||||||||||||||||| ||||    
T  15166687 acgacgactcatgcaacaactcgac 15166711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 14421167 - 14421291
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  14421167 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 14421266  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||||||||||| ||||    
T  14421267 acaacgactcatgcaacaactcgac 14421291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 18871675 - 18871803
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  18871675 taactcttcaatttaatctaacaccctgtcatagtaataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 18871774  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    || ||| ||||||||||||||||| ||||    
T  18871775 aataacaacgactcatgcaacaactcgac 18871803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 16109397 - 16109281
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||    
T  16109397 tcatcaattaaatctaacaccctttcataataataattcatcagtatataattatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 16109298  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  16109297 acatcgactcatgcaac 16109281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 11302668 - 11302789
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaacaac 254  Q
    |||||| ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||    
T  11302668 tcatcatttacatctaacaccctgccataataataattcatcactatataagtatatcatcattaac-acatcaaccaaatgatgattaaagccatcaac 11302766  T
Q  255 gacgactcatgcaacaacccgac 277  Q
     ||||||||||||||||| ||||    
T  11302767 aacgactcatgcaacaactcgac 11302789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 833276 - 833161
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||| |||    
T  833276 tcatcaattaaatctaacactctatcataataataattcatcaatatataaatatatcatcattaacaacatcaacaacaatggtaattaaaaccatcaa 833177  T
Q  254 cgacgactcatgcaac 269  Q
    |  |||||||||||||    
T  833176 catcgactcatgcaac 833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 1198456 - 1198341
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||| |||    
T  1198456 tcatcaattaaatctaacactctatcataataataattcatcaatatataaatatatcatcattaacaacatcaacaacaatggtaattaaaaccatcaa 1198357  T
Q  254 cgacgactcatgcaac 269  Q
    |  |||||||||||||    
T  1198356 catcgactcatgcaac 1198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 3290110 - 3289995
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||  |||||| |||||||||| ||||    
T  3290110 tcatcaattgaatctaacaccctatcataataataattcatcaatatataaatatatcatcattaacaacgtcaacaacaaatggtaattaaaactaaca 3290011  T
Q  253 acgacgactcatgcaa 268  Q
    ||  ||||||||||||    
T  3290010 acatcgactcatgcaa 3289995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 837272 - 837158
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||| ||||||||| || |||    
T  837272 tcatcaattaaatctaacaccctatcataataataattcatcaatatataaatatatcatcattaacaacatgaacaacaatggtaattaaaa-catcaa 837174  T
Q  254 cgacgactcatgcaac 269  Q
    |  |||||||||||||    
T  837173 catcgactcatgcaac 837158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 1202452 - 1202338
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||| ||||||||| || |||    
T  1202452 tcatcaattaaatctaacaccctatcataataataattcatcaatatataaatatatcatcattaacaacatgaacaacaatggtaattaaaa-catcaa 1202354  T
Q  254 cgacgactcatgcaac 269  Q
    |  |||||||||||||    
T  1202353 catcgactcatgcaac 1202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 15437947 - 15437831
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||   ||||| |||||| |||||| |    
T  15437947 tcatcaattgaatctaacaccctaacattataataattcatcaatatataaatatatcatcattaacaacatcaacaataaatggtaattataaccaaaa 15437848  T
Q  253 acgacgactcatgcaac 269  Q
    || |||| |||||||||    
T  15437847 acaacgattcatgcaac 15437831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 46349084 - 46348968
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||| | |||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||| || ||| ||||||||    
T  46349084 tcatcaaatgaatctaacaccctaacataattataattcatcaatatataaatatatcatcattaacaacatcaacaacaaatggtatttataaccaaca 46348985  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  46348984 acatcgactcatgcaac 46348968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 14946166 - 14946052
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||  |||||   |||||||||||| |||| |||||  ||||||  |||||||||||||||    
T  14946166 catcaattgaatctaacaccctatcataataataattcatcatcatatataaatatcatcattatcaacctcaacaacaaatggcaattaaaaccaacaa 14946067  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  14946066 catcgactcatgcaa 14946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 15373759 - 15373645
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||  |||||   |||||||||||| |||| |||||  ||||||  |||||||||||||||    
T  15373759 catcaattgaatctaacaccctatcataataataattcatcatcatatataaatatcatcattatcaacctcaacaacaaatggcaattaaaaccaacaa 15373660  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  15373659 catcgactcatgcaa 15373645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 12547008 - 12547123
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||| |||||||||||||   ||||||||||||  || |||||||| ||||| || ||||||||||||||| | |||| |||||| |||||||||    
T  12547008 tcatcaattgaatctaacaccctaatataataataattattccatatataaatatatgataattaacaacatcaacaataatggtaattacaaccaacaa 12547107  T
Q  254 cgacgactcatgcaac 269  Q
    | || |||||||||||    
T  12547108 caacaactcatgcaac 12547123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 281
Target Start/End: Complemental strand, 10897545 - 10897419
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||| |||| |||||  | ||   |||| |||||    |    
T  10897545 tcatcaattaaatctaacactctgtcataataataattcatcaat-tat-agtatagcatcattagcaacttcaacatccaacagtaataaaaacagtaa 10897448  T
Q  253 acgacgactcatgcaacaacccgacttca 281  Q
    || ||||||||||||||||||||||||||    
T  10897447 acaacgactcatgcaacaacccgacttca 10897419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 14582991 - 14582874
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||| ||||||| ||||||||| |  |||||  |||  |||||||||||||  | |||| |||||| |||||||    
T  14582991 tcatcaattgaatctaacaccctaacataacaataattaatcaatatacatatatattacatatttaacaacatcaagaataatggtaattacaaccaac 14582892  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  14582891 aacaacgactcatgcaac 14582874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 16188088 - 16188012
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatc-aatatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||| ||| |||||||||  ||||||||||||||||| |||||| || ||||||| ||||| ||||||||||    
T  16188088 tcatcaattgaatataacaccctaacataataataattcatcaaatataaaaatatatcaccattatcaacatcaac 16188012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 45185295 - 45185409
Alignment:
Q  158 tcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca-aatgataattaaaaccaacaac 254  Q
    |||||| ||||||| |||||  |||||||||||||  |||||||| |  |||||  ||| || |||||||||||| | |||| |||||| ||||||||||    
T  45185295 tcaattgaatctaataccctaacataataataattattcaatataaatatatatttcataatcaacaacatcaacaataatggtaattacaaccaacaac 45185394  T
Q  255 gacgactcatgcaac 269  Q
     ||||||||||||||    
T  45185395 aacgactcatgcaac 45185409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 14320920 - 14320854
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaat-atataagtatatcatcattaacaacatcaac 230  Q
    ||||||||||||| |||| ||||||||| |||| | ||||||||||| ||||||||||| |||||||    
T  14320920 aatctaacaccctatcatcataataatttatcagttatataagtataacatcattaacagcatcaac 14320854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 14281960 - 14281852
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagta-tatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgact 261  Q
    |||||||||||||  ||| ||||| ||||||||| |||||  || ||||||||||||||||||||||   |||||  ||| |||||||| ||| ||||||    
T  14281960 aatctaacaccctagcatcataatcattcatcaacatatatataatatcatcattaacaacatcaacggtaaatggcaatgaaaaccaataacaacgact 14281861  T
Q  262 catgcaaca 270  Q
    | |||||||    
T  14281860 cgtgcaaca 14281852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 16074299 - 16074262
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataatt 192  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16074299 tcatcaattaaatctaacaccctatcataataataatt 16074262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 11220426 - 11220320
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||  ||||||||||||| |||| |  || |||||||||||| ||||||| | ||  | ||||||||||||| |||  | ||||    
T  11220426 aatctaacaccctatcatataaataattcatcaacatat-ataatgtcatcattaacatcatcaacaacattcggtaattaaaaccaataactgcaactc 11220328  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  11220327 atgcaaca 11220320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 12941611 - 12941737
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941611 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 12941710  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  12941711 caacaacgactcatgcaacaactcgac 12941737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 4476174 - 4476302
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  4476174 taactcttcaatttaatctaacaccatgtcatagtaataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 4476273  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    || ||| ||||||||||||||||| ||||    
T  4476274 aataacaacgactcatgcaacaactcgac 4476302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 28290568 - 28290447
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaacaac 254  Q
    |||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  28290568 tcatcaattacatctaacactctgccataataataattcaccaatatataagtatatcatcattaac-acatcaaccaaatgataattaaagccatcaac 28290470  T
Q  255 gacgactcatgcaacaacccgac 277  Q
     ||||||||||||||||| ||||    
T  28290469 aacgactcatgcaacaactcgac 28290447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 17413840 - 17413956
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||||   ||||| |||| ||||||||||    
T  17413840 tcatcaattgaatctaacaccctaacataataataattcctcaatatataaatatatcatcattaacaacatcaacaataaatggtaataaaaaccaaca 17413939  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  17413940 acatcgactcatgcaac 17413956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 19818752 - 19818865
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||| ||| | |||||||||||||||||||| |||||   |||||||||||| ||||||||||  |||||| ||||||||||||||||    
T  19818752 catcaattgaatctaaaaccttatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaacaa 19818851  T
Q  254 cgacgactcatgca 267  Q
    |  |||||||||||    
T  19818852 catcgactcatgca 19818865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 14616595 - 14616479
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatc--aaccaaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||  |||||||  || |||| | ||||||||||||||||    
T  14616595 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattttcaacatcaaaaacaaacggtaattaaaaccaacaa 14616496  T
Q  254 cgacgactcatgcaaca 270  Q
    |  ||||||||||||||    
T  14616495 cttcgactcatgcaaca 14616479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 24412629 - 24412512
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||||| |  |||||  ||| ||||||||||||||| | |||| |||||| |||||||    
T  24412629 tcatcaattgaatctaacaccctaacataaaaataattattcaatatacatatatatttcataattaacaacatcaacaataatggtaattacaaccaac 24412530  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  24412529 aacaacgactcatgcaac 24412512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 8760748 - 8760641
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| ||||| | | |||||||| | ||||||||||  |||||| ||| | |||| |||| |  ||||||    
T  8760748 aatctaacaccctatcataataataattcatcaacatatatgaacatcatcatcatcaacatcaacaacaaatggtaaatgaaacaaacaccatcgactc 8760649  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  8760648 atgcaaca 8760641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 2708218 - 2708336
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataata----attcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacca 249  Q
    |||||||| ||||||||||||| || ||||||||     |||||||| |||||   |||||||||||| ||||||||||  ||||||  |||||||||||    
T  2708218 catcaattgaatctaacaccctatcttaataatatttgtttcatcaacatatataaatatcatcattatcaacatcaacaacaaatggcaattaaaacca 2708317  T
Q  250 acaacgacgactcatgcaa 268  Q
    |||||  ||||||||||||    
T  2708318 acaacatcgactcatgcaa 2708336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 19588894 - 19588790
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||| ||||||| |||||||||||||||||||| |||||   |||||||||||| |||||||||| | ||  | ||||||||||||| |||  | ||||    
T  19588894 aatctgacaccctatcataataataattcatcaacatata---atatcatcattatcaacatcaacaatattcggtaattaaaaccaataactgcaactc 19588798  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  19588797 atgcaaca 19588790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 14582181 - 14582136
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatat 201  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  14582181 catcaattaaatctatcaccctatcataataataattcatcaatat 14582136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 14724225 - 14724331
Alignment:
Q  165 aatctaacaccctgtcataataataattcatca--atatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgac 260  Q
    ||||||||||||| |||||||||||||||||||  |||||||| || |||||||||  ||||||||||  |||| | || ||||||||||||||  | ||    
T  14724225 aatctaacaccctatcataataataattcatcaacatatataaata-atcatcattttcaacatcaacaacaaacggtagttaaaaccaacaacttcaac 14724323  T
Q  261 tcatgcaa 268  Q
    ||||||||    
T  14724324 tcatgcaa 14724331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 22798853 - 22798736
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||||  |||  ||| |||| ||||||||||||||| | |||| || ||| |||||||    
T  22798853 tcatcaattgaatctaacaccctaacataacaataattattcaatatacatatatatttcataattaacaacatcaacaataatggtatttacaaccaac 22798754  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| || |||||||||||    
T  22798753 aacaacaactcatgcaac 22798736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 31250114 - 31250180
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaa-tatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||||||| |||| |||| |||||||||| || ||||||| | |||||||| ||||||||||    
T  31250114 aatctaacaccctatcattataacaattcatcaattaaataagtacaacatcattagcaacatcaac 31250180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 12304560 - 12304686
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304560 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 12304659  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  12304660 caacaacgactcatgcaacaactcgac 12304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 14764496 - 14764370
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764496 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 14764397  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  14764396 caacaacgactcatgcaacaactcgac 14764370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 9532660 - 9532786
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9532660 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaactgataattaaaaccaa 9532759  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  9532760 caacaacgactcatgcaacaactcgac 9532786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 155 - 281
Target Start/End: Complemental strand, 20249500 - 20249372
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  20249500 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 20249401  T
Q  253 acgacgactcatgcaacaacccgacttca 281  Q
    || ||||||||||||||||||||||||||    
T  20249400 acaacgactcatgcaacaacccgacttca 20249372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 3802348 - 3802474
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3802348 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtacatcatcattaacaacatcaaccaaatgataattaaaaccaa 3802447  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||| ||||||||||| ||||    
T  3802448 caacaacgacccatgcaacaactcgac 3802474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 38312513 - 38312390
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  38312513 tcatcaattaaatctaacaccttgtcataataataactcatcaatatataagtatatcatcattaacaacatcaacaacaatggtaattaaaaccaacaa 38312414  T
Q  254 cgacgactcatgcaacaacccgac 277  Q
    | ||||||||||||||||| ||||    
T  38312413 caacgactcatgcaacaactcgac 38312390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 11306103 - 11305987
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||    
T  11306103 tcatcaattgaatctaacaccctgacataataataattcatcaatatataaatatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 11306004  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  11306003 acatcgactcatgcaac 11305987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 23372244 - 23372116
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||| |||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  23372244 taactcttcaatttaatcttacaccctgtcatcgtaataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 23372145  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    || ||| ||||||||||||||||| ||||    
T  23372144 aataacaacgactcatgcaacaactcgac 23372116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 51299911 - 51300039
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||| |||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  51299911 taactcttcaatttaatcttacaccctgtcatcgtaataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 51300010  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    || ||| ||||||||||||||||| ||||    
T  51300011 aataacaacgactcatgcaacaactcgac 51300039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 18136647 - 18136531
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||| |||||||||||||||    
T  18136647 tcatcaattgaatctaacaccctaacataataataattcatcaatttataaatatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 18136548  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  18136547 acatcgactcatgcaac 18136531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 29545516 - 29545392
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||| |||||||||||  |||||| ||||||||||||| |    
T  29545516 tcatcaattaaatctaacaccctgtcataataatgattcgtcaatatataaatatatcctcattcacaacatcaacaacaaatggtaattaaaaccaata 29545417  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    ||  |||||||||||||||| ||||    
T  29545416 acatcgactcatgcaacaactcgac 29545392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 12202170 - 12202286
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||   ||||| |||||| ||||||||    
T  12202170 tcatcaattgaatctaacaccctaacataataatgattcatcaatatataaatatatcatcattaacaacatcaacaataaatggtaattataaccaaca 12202269  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  12202270 acatcgactcatgcaac 12202286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 54900445 - 54900325
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    ||||||||||| | |||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||| || ||| ||||    
T  54900445 taactcatcaaatgaatctaacaccctaacataattataattcatcaatatataaatatatcatcattaacaacatcaacaacaaatggtatttataacc 54900346  T
Q  249 aacaacgacgactcatgcaac 269  Q
    ||||||  |||||||||||||    
T  54900345 aacaacatcgactcatgcaac 54900325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 2270593 - 2270477
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||   ||| | |||||| ||||||||    
T  2270593 tcatcaattgaatctaacaccctaacataataataattcatcaatatataaatatatcatcgttaacaacatcaacaataaagggtaattataaccaaca 2270494  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  2270493 acatcgactcatgcaac 2270477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 23173656 - 23173748
Alignment:
Q  179 tcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactcatgcaac 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||  | |||||||||||    
T  23173656 tcatagtaataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaacaacatctactcatgcaac 23173748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 18130119 - 18130017
Alignment:
Q  169 taacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactcatgc 266  Q
    |||||||||  |||||||||||||||||||| ||||| ||||| ||||||||||||||||||  |||||| |||||||||||||||||  ||||||||||    
T  18130119 taacaccctaacataataataattcatcaatttataaatatatgatcattaacaacatcaacaacaaatggtaattaaaaccaacaacatcgactcatgc 18130020  T
Q  267 aac 269  Q
    |||    
T  18130019 aac 18130017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 11965225 - 11965112
Alignment:
Q  157 atcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaac 254  Q
    ||||||| |||||||||| || |||||||||||||||||||| |||||   |||||||||||| ||||||||||  | |||| |||||||||||||||||    
T  11965225 atcaattgaatctaacactctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaactaatggtaattaaaaccaacaac 11965126  T
Q  255 gacgactcatgcaa 268  Q
      |||||| |||||    
T  11965125 atcgactcgtgcaa 11965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 17495965 - 17496081
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  || ||| |||||||||||||||  || ||||||||||||||||||||||||   ||||| |||||| ||| ||||    
T  17495965 tcatcaattgaatctaacaccctaacacaatgataattcatcaatattcaaatatatcatcattaacaacatcaacaataaatggtaattataactaaca 17496064  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  17496065 acatcgactcatgcaac 17496081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 12356333 - 12356258
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||  ||||||| ||||| ||||||||||    
T  12356333 tcatcaattgaatctaacaccctaacataataataattcatcaatatatagatatatcaccattatcaacatcaac 12356258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 12362882 - 12362807
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||  ||||||| ||||| ||||||||||    
T  12362882 tcatcaattgaatctaacaccctaacataataataattcatcaatatatagatatatcaccattatcaacatcaac 12362807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 17199356 - 17199248
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagta-tatcatcattaacaacatcaacc--aaatgataattaaaaccaacaacgacgact 261  Q
    ||||||||||||| | || ||||  ||||||||| |||||  || ||||||||||||||||||||||   |||||| |||||||||||| ||| ||||||    
T  17199356 aatctaacaccctattatcataaccattcatcaacatatatataatatcatcattaacaacatcaacggtaaatgacaattaaaaccaataacaacgact 17199257  T
Q  262 catgcaaca 270  Q
    |||||||||    
T  17199256 catgcaaca 17199248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 14569632 - 14569749
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaac-caaatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  ||  |||| | |||||  |||| || |||||||||||| | |||| || ||| |||||||    
T  14569632 tcatcaattgaatctaacaccctaacataataataattattccttataaatgtatatctcataatcaacaacatcaacactaatggtatttacaaccaac 14569731  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  14569732 aacaacgactcatgcaac 14569749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 18130171 - 18130121
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataa 205  Q
    ||||||||| |||||||||||||  |||||||||||||||||||| |||||    
T  18130171 tcatcaattgaatctaacaccctaacataataataattcatcaatttataa 18130121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 19443324 - 19443440
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaa-accaacaa 253  Q
    |||||||| ||||||||||||| | |||||||||||||||||| || | |  | |||||||||  ||| |||||| | |||| |||||||| |||||||     
T  19443324 catcaattgaatctaacaccctattataataataattcatcaacattttataacatcatcattttcaatatcaacaacaatggtaattaaagaccaacat 19443423  T
Q  254 cgacgactcatgcaaca 270  Q
    |  ||||||||||||||    
T  19443424 catcgactcatgcaaca 19443440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 12034700 - 12034583
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||| || || |||||||||| |||||||||| |||||||| |||| |||||  | ||  ||||| |||||    ||| |||||||    
T  12034700 aatctaacaccctatcatcatgatcattcatcaat-tataagtatagcatcattagcaacttcaacatccaacaataataaaaacagtaaacaacgactc 12034602  T
Q  263 atgcaacaacccgacttca 281  Q
    |||| ||||||||||||||    
T  12034601 atgcgacaacccgacttca 12034583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 18719439 - 18719349
Alignment:
Q  181 ataataataattcatcaatatataagtatatcatcattaacaacatca--accaaatgataattaaaaccaacaacgacgactcatgcaac 269  Q
    |||||||||||||||||| |||||   |||||||||||| ||||||||  | |||||| ||| ||| ||||||| |  |||||||||||||    
T  18719439 ataataataattcatcaacatatataaatatcatcattatcaacatcatcaacaaatggtaaataagaccaacaccatcgactcatgcaac 18719349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 12961714 - 12961652
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||||||| | |||||||||||||||||| |||||  || |||||||||| ||||||||||    
T  12961714 aatctaacaccctattataataataattcatcaacatata--ta-atcatcattatcaacatcaac 12961652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 6e-56; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 15533597 - 15533723
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533597 taactcatcaattaaatatatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 15533696  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    ||||||||| |||||||||||| ||||    
T  15533697 caacgacgattcatgcaacaactcgac 15533723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 36037330 - 36037430
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037330 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 36037429  T
Q  251 c 251  Q
    |    
T  36037430 c 36037430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 30146623 - 30146739
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  30146623 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 30146722  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  30146723 acatcgactcatgcaac 30146739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 14047876 - 14047992
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||    
T  14047876 tcatcaattaaatctaacaccctatcataataataattcatcaatatataaatatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 14047975  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  14047976 acatcgactcatgcaac 14047992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 2585497 - 2585384
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaacaac 254  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||||||||    
T  2585497 tcatcaattgaatctaacaccctatcataataataattcatcaatatataaatatatcatcattaacaacgtcaa-caaatggtaattaaaaccaacaac 2585399  T
Q  255 gacgactcatgcaac 269  Q
      |||||||||||||    
T  2585398 atcgactcatgcaac 2585384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 16484443 - 16484558
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||| |||||||||||||  |||  |||||||| |||||||||||| |||||||| ||||||||||||||| | |||| |||||| |||||||||    
T  16484443 tcatcaattgaatctaacaccctaacatggtaataattaatcaatatataaatatatcataattaacaacatcaacaataatggtaattacaaccaacaa 16484542  T
Q  254 cgacgactcatgcaac 269  Q
    | ||||||||||||||    
T  16484543 caacgactcatgcaac 16484558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 14556412 - 14556296
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||| |  |||||||||||||||||||| |||||  |||||||||||| ||||||||||  |||||| |||||||||||||||    
T  14556412 tcatcaattgaatctaacaccataacataataataattcatcaatgtataa-aatatcatcattatcaacatcaacaacaaatggtaattaaaaccaaca 14556314  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  14556313 acatcgactcatgcaaca 14556296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 41529409 - 41529295
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||| ||||||| ||||||||||  ||||||| |||||||||||||||    
T  41529409 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatattatcattatcaacatcaacaacaaatgacaattaaaaccaacaa 41529310  T
Q  254 cgacgactcatgcaa 268  Q
    |  |||| |||||||    
T  41529309 catcgacgcatgcaa 41529295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 16221083 - 16221186
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||||| ||| ||||  ||||||  ||||||||||||||     
T  16221083 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattaaccacagcaacaacaaatggcaattaaaaccaacat 16221182  T
Q  254 cgac 257  Q
    ||||    
T  16221183 cgac 16221186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 14910452 - 14910522
Alignment:
Q  209 tatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactcatgcaacaacccgac 277  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  14910452 tatcatcattaacaacatcaacaacaaatggtaattaaaaccaacaacaacgactcatgcaacaactcgac 14910522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 16156477 - 16156594
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaa-tgataattaaaaccaaca 252  Q
    |||||||| ||||||||||||| |||||||||||| ||||||| |||||   |||||||||||| ||||||||||  |||| |||  ||||||||| |||    
T  16156477 catcaattgaatctaacaccctatcataataataaatcatcaacatatataaatatcatcattaccaacatcaacaacaaattgacgattaaaacccaca 16156576  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  16156577 acatcgactcatgcaaca 16156594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 14062770 - 14062875
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||| ||||||||||||| |||||   |||| ||||||| ||||||||||  |||||| || ||||||||||||||  | ||||    
T  14062770 aatctaacaccctatcataacaataattcatcaacatatataaatattatcattatcaacatcaacaacaaatggtacttaaaaccaacaacttcaactc 14062869  T
Q  263 atgcaa 268  Q
    ||||||    
T  14062870 atgcaa 14062875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 16152331 - 16152448
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaa-tgataattaaaaccaaca 252  Q
    |||||||| ||||||||||||| | |||||||||| ||||||| |||||   |||||||||||| ||||||||||  |||| |||  ||||||||| |||    
T  16152331 catcaattgaatctaacaccctattataataataaatcatcaacatatataaatatcatcattaccaacatcaacaacaaattgaagattaaaacccaca 16152430  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  16152431 acatcgactcatgcaaca 16152448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 15324739 - 15324803
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaa 229  Q
    |||||| |||||| |||||||||||||||||||| |||||   |||||||||||| |||||||||    
T  15324739 aatctagcaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaa 15324803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 15546402 - 15546524
Alignment:
Q  155 tcatcaattaaatctaacaccctg-tcataataataattcatcaatat--ataagtatatcatcattaacaacatcaaccaa--atgataattaaaacca 249  Q
    ||||||||| |||||||||||||  |||||| |||||||  |||||||  |||  ||| |||| ||||||||||||||| ||  ||| |||||  |||||    
T  15546402 tcatcaattgaatctaacaccctaatcataacaataattattcaatatgcatatatatttcataattaacaacatcaacaaataatggtaatttcaacca 15546501  T
Q  250 acaacgacgactcatgcaacaac 272  Q
    ||||| |||||||||||||||||    
T  15546502 acaacaacgactcatgcaacaac 15546524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 40908435 - 40908484
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatata 204  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  40908435 tcatcaattgaatctaacaccctatcatgataataattcatcaacatata 40908484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 15005313 - 15005234
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca 232  Q
    ||||||||| |||||||||||||  |||||||||||||   ||||||  |||  |||||||| |||||||||||||||||    
T  15005313 tcatcaattgaatctaacaccctaacataataataattatccaatataaatatatatatcataattaacaacatcaacca 15005234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 26078026 - 26077920
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| |||| |  |||||||| ||| | |||||||| | ||  ||||||||| ||||| |||  | ||||    
T  26078026 aatctaacaccctatcataataataattcatcaacatat-ataatatcatcgttatccacatcaacaacattcgataattaagaccaataactgcaactc 26077928  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  26077927 atgcaaca 26077920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 13899961 - 13899845
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | |||||  |||| || ||| |||||||| | |||| || ||| |||||||    
T  13899961 tcatcaattgaatctaacaccctaacataataataattattcaatataaatgtatatttcataatcaac-acatcaacaacaatggtatttacaaccaac 13899863  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| | ||||||||||||    
T  13899862 aacaatgactcatgcaac 13899845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 10685990 - 10685864
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10685990 taactcatcaattaaatctatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattacaaccaa 10685891  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    |||| ||||||||||||||||| ||||    
T  10685890 caacaacgactcatgcaacaactcgac 10685864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 20260635 - 20260761
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 250  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260635 taactcatcaattaaatatatcaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaa 20260734  T
Q  251 caacgacgactcatgcaacaacccgac 277  Q
    ||||||||| |||||||||||| ||||    
T  20260735 caacgacgattcatgcaacaactcgac 20260761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 19663192 - 19663064
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  19663192 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 19663093  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    |||||| ||||||||||||||||| ||||    
T  19663092 aacaacaacgactcatgcaacaactcgac 19663064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 6261914 - 6261782
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  6261914 taactcatcaattaaatctaacaccctgtcataataataatttatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 6261815  T
Q  249 aacaacgacgactcatgcaacaacccgacttca 281  Q
    |||||| ||||||||||  ||||||||||||||    
T  6261814 aacaacaacgactcatgtgacaacccgacttca 6261782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 9241146 - 9241270
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  9241146 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 9241245  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||||||||||| ||||    
T  9241246 acaacgactcatgcaacaactcgac 9241270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 6482165 - 6482280
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  6482165 tcatcaattaaatctaacatcctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 6482264  T
Q  253 acgacgactcatgcaa 268  Q
    || |||||||||||||    
T  6482265 acaacgactcatgcaa 6482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 6485632 - 6485747
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  6485632 tcatcaattaaatctaacatcctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 6485731  T
Q  253 acgacgactcatgcaa 268  Q
    || |||||||||||||    
T  6485732 acaacgactcatgcaa 6485747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 26883979 - 26884091
Alignment:
Q  169 taacaccctgtcataataataattcatcaat-atataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactcatg 265  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||    
T  26883979 taacaccctatcatcataataattcatcaattatataagtatatcatcattaacaacatcaacatcaaatggtaataaaaaccaacaacaacgactcatg 26884078  T
Q  266 caacaacccgact 278  Q
    ||||||| |||||    
T  26884079 caacaactcgact 26884091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 22797004 - 22796929
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  22797004 tcatcaattgaatctaacaccctaacataataataattcatcaatatataaatatatcaccattatcaacatcaac 22796929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 23290778 - 23290895
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataatt-aaaaccaac 251  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||  | ||||| |||| ||||||||||  |||||| ||||| |||||| ||    
T  23290778 tcatcaattgaatctaacaccctatcataataataattcatcaatatacaa-aacatcatgattatcaacatcaacaacaaatggtaattaaaaaccgac 23290876  T
Q  252 aacgacgactcatgcaaca 270  Q
    |||  ||||||||||||||    
T  23290877 aacttcgactcatgcaaca 23290895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 20723896 - 20724002
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| |||| |  |||||||||||| |||||||||| ||||  | ||||||||||||| |||  | ||||    
T  20723896 aatctaacaccctatcataataataattcatcaacatat-ataatatcatcattatcaacatcaacaaaattcggtaattaaaaccaataactgcaactc 20723994  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  20723995 atgcaaca 20724002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 22809745 - 22809852
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| |||||||||| | ||  | ||||||||||||| |||  | ||||    
T  22809745 aatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacattcggtaattaaaaccaataactgcaactc 22809844  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  22809845 atgcaaca 22809852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 27211333 - 27211215
Alignment:
Q  165 aatctaacaccctgtcataataataattcatca-atatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgact 261  Q
    ||||||||||||| |||| ||||||||||||||  |||||||||||| ||||||||||| |||||||    |||| | | |||||||| |||| ||||||    
T  27211333 aatctaacaccctatcatcataataattcatcagttatataagtataacatcattaacagcatcaacattcaatggt-agtaaaaccagcaacaacgact 27211235  T
Q  262 catgcaacaacccgacttca 281  Q
    ||||||||||| ||||||||    
T  27211234 catgcaacaactcgacttca 27211215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 19703796 - 19703732
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaa 229  Q
    ||||| ||||||| |||||||||||||||||||| || ||   |||||||||||| |||||||||    
T  19703796 aatctgacaccctatcataataataattcatcaacatttataaatatcatcattatcaacatcaa 19703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 20914676 - 20914558
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatca--accaaatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| |||||||||||||  |  || || |||||  ||||||    
T  20914676 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattaacaacatcatcaataagtggtaatttcaaccaa 20914577  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  20914576 caacaacgactcatgcaac 20914558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 16371350 - 16371478
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  16371350 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaca 16371449  T
Q  253 acgacgactcatgcaacaacccgacttca 281  Q
    || ||||||||||||||||||||||||||    
T  16371450 acaacgactcatgcaacaacccgacttca 16371478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 20438895 - 20438771
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||| |||||||||||||||    
T  20438895 tcatcaattaaatctaacactctgtcataataataattcatcaatatataagtatattatcatcaacaacatcaacaacaaatggtaattaaaaccaaca 20438796  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||||||||||| ||||    
T  20438795 acaacgactcatgcaacaactcgac 20438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 29534785 - 29534901
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||    
T  29534785 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaagccaaca 29534884  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  29534885 acatcgactcatgcaac 29534901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 32649948 - 32650064
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| |    
T  32649948 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaaccaaaa 32650047  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  32650048 acatcgactcatgcaac 32650064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 16883870 - 16883755
Alignment:
Q  157 atcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaac 254  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||||  |||||||||||| ||||||||||  |||||| |||||||||||||||||    
T  16883870 atcaattgaatctaacaccctatcataataataattcatgaatatataaaaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaacaac 16883771  T
Q  255 gacgactcatgcaaca 270  Q
      ||||||||||||||    
T  16883770 atcgactcatgcaaca 16883755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 20824676 - 20824562
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  |||||||||||||||||||||||    
T  20824676 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatgataattaaaaccaacaa 20824577  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  20824576 catcgactcatgcaa 20824562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 19667066 - 19666951
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||| |||||||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||| ||  || |||||||||    
T  19667066 tcatcaattgaatctaacaccctaacataattataattcatcaatatataaatatatcatcattaacaacatcaacaacaatggtatatataaccaacaa 19666967  T
Q  254 cgacgactcatgcaac 269  Q
    || |||||||||||||    
T  19666966 cgtcgactcatgcaac 19666951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 11141337 - 11141221
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||   ||||| |||||| ||||||||    
T  11141337 tcatcaattgaatctaacaccctaacataataacaattcatcaatatataaatatatcatcattaacaacatcaacaataaatggtaattataaccaaca 11141238  T
Q  253 acgacgactcatgcaac 269  Q
    ||  || ||||||||||    
T  11141237 acatcgtctcatgcaac 11141221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 19859011 - 19859127
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||| | |||||||||||||  |||| | ||||||||||||||||||| ||||||||||||||||||||||||  |||||| || ||| ||||||||    
T  19859011 tcatcaaatgaatctaacaccctaacatagttataattcatcaatatataaatatatcatcattaacaacatcaacaacaaatggtatttataaccaaca 19859110  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  19859111 acatcgactcatgcaac 19859127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 20838495 - 20838381
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| |||||||||| || |||||||||||||||||||| |||||   |||||||||||| || |||||||  |||||| ||||||||||||||||    
T  20838495 catcaattgaatctaacactctatcataataataattcatcaacatatataaatatcatcattatcagcatcaacaacaaatggtaattaaaaccaacaa 20838396  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  20838395 catcgactcatgcaa 20838381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 19852876 - 19852992
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||| | |||||||||||||  |||| | |||||||| |||||||||| ||||||||||||||||||||||||  |||||| || ||| ||||||||    
T  19852876 tcatcaaatgaatctaacaccctaacatagttataattcaccaatatataaatatatcatcattaacaacatcaacaacaaatggtatttataaccaaca 19852975  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  19852976 acatcgactcatgcaac 19852992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 20942188 - 20942087
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaata--tataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaa 250  Q
    ||||||||| ||||||||||||| |||||| || ||||||||||||  |||||| ||| |||||||| ||||||||||  |||||| |||||||||||||    
T  20942188 tcatcaattgaatctaacaccctatcataaaaacaattcatcaatatatataagaataacatcattatcaacatcaacaacaaatggtaattaaaaccaa 20942089  T
Q  251 ca 252  Q
    ||    
T  20942088 ca 20942087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 23630791 - 23630908
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| ||||||||||||||| | |||| |||||| |||||||    
T  23630791 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattaacaacatcaacaataatggtaattacaaccaac 23630890  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  23630891 aacaacgactcatgcaac 23630908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 19778784 - 19778668
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||| ||||||||||||| |||||   ||||| |||||| ||||||||||  |||||| ||| ||| ||||| ||    
T  19778784 catcaattgaatctaacaccctatcataaaaataattcatcaacatatataaatatcttcattatcaacatcaacaacaaatggtaaataagaccaataa 19778685  T
Q  254 cgacgactcatgcaaca 270  Q
    |  | ||||||||||||    
T  19778684 ctgcaactcatgcaaca 19778668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 23712310 - 23712428
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataag---tatatcatcattaacaacatcaacca-aatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||  |||| ||||||||  |||||||| ||    ||| |||| ||||||||||||||| | |||| |||||| ||||||    
T  23712310 tcatcaattgaatctaacaccctaacatagtaataattattcaatatacaatatatatttcataattaacaacatcaacaataatggtaattacaaccaa 23712409  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  23712410 caacaacgactcatgcaac 23712428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 21697970 - 21698087
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||||  |||  ||| |||| ||||||||||||||| | ||||  ||||| |||||||    
T  21697970 tcatcaattgaatctaacaccctaacataacaataattattcaatatacatatatatttcataattaacaacatcaacaataatggaaattacaaccaac 21698069  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  21698070 aacaacgactcatgcaac 21698087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 21999954 - 21999837
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| |  ||||  |||| || |||||||||||| | |||| ||||||  ||||||    
T  21999954 tcatcaattgaatctaacaccctagcataataataattattcaatataaatatatacttcataatcaacaacatcaacaataatggtaattacgaccaac 21999855  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  21999854 aacaacgactcatgcaac 21999837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 22041022 - 22040905
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| |  ||||  |||| || |||||||||||| | |||| ||||||  ||||||    
T  22041022 tcatcaattgaatctaacaccctagcataataataattattcaatataaatatatacttcataatcaacaacatcaacaataatggtaattacgaccaac 22040923  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  22040922 aacaacgactcatgcaac 22040905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 21664004 - 21664121
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaac-caaatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| |  ||||  |||| || ||||| |||||| |||| | |||||| ||||| |    
T  21664004 tcatcaattgaatctaacaccctaacataataataattattcaatataaatatatacttcataatcaacaaaatcaacacaaagggtaattacaaccatc 21664103  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  21664104 aacaacgactcatgcaac 21664121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 30491772 - 30491655
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||||  |||  ||| |||| ||||||||||||||| | |||| || ||| |||||||    
T  30491772 tcatcaattgaatctaacaccctaacataacaataattattcaatatacatatatatttcataattaacaacatcaacaataatggtatttacaaccaac 30491673  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| || |||||||||||    
T  30491672 aacaacaactcatgcaac 30491655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 41311983 - 41312100
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  || ||||  |||  ||| |||| ||||||||||||||| | |||  |||||  |||||||    
T  41311983 tcatcaattgaatctaacaccctaacataataataattattctatatacatatatatttcataattaacaacatcaactataatagtaatttcaaccaac 41312082  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  41312083 aacaacgactcatgcaac 41312100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 31927762 - 31927644
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca--aatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||   ||||||||||||  |||||| | |  |||||  ||| ||||||||||||||| |  | || |||||  ||||||    
T  31927762 tcatcaattgaatctaacaccctaagataataataattattcaatacacatatatattccataattaacaacatcaacaaatagtggtaatttcaaccaa 31927663  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  31927662 caacaacgactcatgcaac 31927644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 110002 - 110130
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  110002 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 110101  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    |||||| ||||||||||||||||| ||||    
T  110102 aacaacaacgactcatgcaacaactcgac 110130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 124792 - 124685
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactc 262  Q
    ||||||||| ||| |||||||||||||||||||| ||||| | | |||||||| | ||||||||||  |||||| ||| | ||||||||| |  ||||||    
T  124792 aatctaacatcctatcataataataattcatcaacatatatgaacatcatcatcatcaacatcaacaacaaatggtaaatgaaaccaacaccatcgactc 124693  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  124692 atgcaaca 124685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 37185 - 37057
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||||    
T  37185 taactcatcaattaaatctaacaccctatcataataataattcatcaatatataagtatatcatcattaacaacatcaacaataaatggtaattaaaacc 37086  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    |||||| ||||||||||||||||| ||||    
T  37085 aacaacaacgactcatgcaacaactcgac 37057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 8729376 - 8729252
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||||||||    
T  8729376 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatctttaacaacatcaacaacaaatggtaattaaaaccaaca 8729277  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    || ||||||||||||||||| ||||    
T  8729276 acaacgactcatgcaacaactcgac 8729252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 44476080 - 44476195
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  44476080 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 44476179  T
Q  253 acgacgactcatgcaa 268  Q
    || |||||||||||||    
T  44476180 acaacgactcatgcaa 44476195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 44479342 - 44479457
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  44479342 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatattatcattaacaacatcaacaacaaatggtaattaaaaccaaca 44479441  T
Q  253 acgacgactcatgcaa 268  Q
    || |||||||||||||    
T  44479442 acaacgactcatgcaa 44479457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 27942537 - 27942413
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  | |||| |||| |||||||| |    
T  27942537 tcatcaattaaatctaacaccctgtcatattaataattcatcaatatataaatatatcatcattaacaacatcaacatccaatggtaataaaaaccaata 27942438  T
Q  253 acgacgactcatgcaacaacccgac 277  Q
    ||  |||||||||||||||| ||||    
T  27942437 acttcgactcatgcaacaactcgac 27942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 19988521 - 19988403
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataatt-aaaaccaac 251  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||  ||||| |||||| || |||||||  |||||| ||||| |||||||||    
T  19988521 tcatcaattgaatctaacaccctatcataataataattcttcaatatataaaaatatcctcattatcatcatcaacaacaaatggtaattaaaaaccaac 19988422  T
Q  252 aacgacgactcatgcaaca 270  Q
    |||  ||||||||||||||    
T  19988421 aacatcgactcatgcaaca 19988403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 21300506 - 21300390
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaa 253  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||  ||||||| |||||||||||||||| | ||  | ||||| ||||||| |    
T  21300506 tcatcaattgaatctaacaccctaacataataataattcatcaatatatagatatatcaccattaacaacatcaacaataaatagaattacaaccaacga 21300407  T
Q  254 cgacgactcatgcaaca 270  Q
    |  ||||||||||||||    
T  21300406 catcgactcatgcaaca 21300390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 16259360 - 16259475
Alignment:
Q  158 tcaattaaatctaacaccctgtcataataataattcatcaatatataagt--atatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||| |||||||||||||  |||||||| ||||||||||||||||| |  |||||||||||||||||||||||   ||||| |||||| |||||||||    
T  16259360 tcaattgaatctaacaccctaacataataacaattcatcaatatataaataaatatcatcattaacaacatcaacaataaatggtaattataaccaacaa 16259459  T
Q  254 cgacgactcatgcaac 269  Q
    |  || ||||||||||    
T  16259460 catcgtctcatgcaac 16259475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 21322585 - 21322469
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  |||||| ||| ||| ||||| ||    
T  21322585 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggtaaataagaccaataa 21322486  T
Q  254 cgacgactcatgcaaca 270  Q
    |  | ||||||||||||    
T  21322485 ctgcaactcatgcaaca 21322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 21327173 - 21327057
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  |||||| ||| ||| ||||| ||    
T  21327173 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggtaaataagaccaataa 21327074  T
Q  254 cgacgactcatgcaaca 270  Q
    |  | ||||||||||||    
T  21327073 ctgcaactcatgcaaca 21327057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 20974344 - 20974238
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  |||||| ||| ||| ||||||| |  ||||||    
T  20974344 aatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggtaaataagaccaacaccatcgactc 20974245  T
Q  263 atgcaac 269  Q
    |||||||    
T  20974244 atgcaac 20974238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 41009773 - 41009667
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| |||| |  ||||||||||||  ||||||||| | ||  | ||||||||||||| |||  | ||||    
T  41009773 aatctaacaccctatcataataataattcatcaacatat-ataatatcatcattataaacatcaacaacattcggtaattaaaaccaataactgcaactc 41009675  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  41009674 atgcaaca 41009667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 22025912 - 22025802
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataatt-aaaaccaaca 252  Q
    |||||||| |||||||||||||   || ||||||||||||||| |||||   |||||||||||| ||| ||||||  |||||| ||||| |||||||||     
T  22025912 catcaattgaatctaacaccct---atcataataattcatcaacatatataaatatcatcattatcaatatcaacaacaaatggtaattaaaaaccaac- 22025817  T
Q  253 acgacgactcatgca 267  Q
    || ||||||||||||    
T  22025816 acaacgactcatgca 22025802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 22063915 - 22063805
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataatt-aaaaccaaca 252  Q
    |||||||| |||||||||||||   || ||||||||||||||| |||||   |||||||||||| ||| ||||||  |||||| ||||| |||||||||     
T  22063915 catcaattgaatctaacaccct---atcataataattcatcaacatatataaatatcatcattatcaatatcaacaacaaatggtaattaaaaaccaac- 22063820  T
Q  253 acgacgactcatgca 267  Q
    || ||||||||||||    
T  22063819 acaacgactcatgca 22063805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 22176216 - 22176164
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcat 217  Q
    ||||||||||||| |||||||||||||||||||| |||||   ||||||||||    
T  22176216 aatctaacaccctatcataataataattcatcaacatatataaatatcatcat 22176164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 22743538 - 22743656
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||||  |||  ||| |||| |||||||||||||||   || || |||||  ||||||    
T  22743538 tcatcaattgaatctaacaccctaacataacaataattattcaatatacatatatatttcataattaacaacatcaacaataagtggtaatttcaaccaa 22743637  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  22743638 caacaacgactcatgcaac 22743656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 1264057 - 1264170
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaa-caa 253  Q
    |||||||| ||||||||||||| |||| ||||| ||||||||| |||||   ||| ||||||||  ||| ||||| | ||||| |||||||||||| |||    
T  1264057 catcaattgaatctaacaccctatcat-ataatcattcatcaacatatatagatagcatcattataaacgtcaacaacaatgacaattaaaaccaatcaa 1264155  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  1264156 catcgactcatgcaa 1264170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 10606781 - 10606847
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatata-agtatatcatcattaacaacatcaac 230  Q
    ||||||||||||| ||||||||||||| |||||| ||||| |  |||||||||||| || |||||||    
T  10606781 aatctaacaccctatcataataataatccatcaacatatatataatatcatcattatcagcatcaac 10606847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 3217 - 3089
Alignment:
Q  151 taactcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaacc 248  Q
    |||||| |||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  3217 taactcttcaatttaatcttacaccctgtcatcgtaataattcatcaatatataagtatatcatcattaacaacatcaacaacaaatggtaattaaaacc 3118  T
Q  249 aacaacgacgactcatgcaacaacccgac 277  Q
    || ||| ||||||||||||||||| ||||    
T  3117 aataacaacgactcatgcaacaactcgac 3089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 95694 - 95810
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||  |||||| |||||||||||||||    
T  95694 tcatcaattgaatctaacaccctatcataataataattcatcaatatataaatatatcatcattaacgacatcaacaacaaatggtaattaaaaccaaca 95793  T
Q  253 acgacgactcatgcaac 269  Q
    ||| |||||||||||||    
T  95794 acgtcgactcatgcaac 95810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 494312 - 494196
Alignment:
Q  165 aatctaacaccctgtcataataataattcat-caat-atataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacgac 260  Q
    ||||||||||||| |||| |||||||||||| |||| |||||||||| ||||||||| ||||||||||  |||||| || | |||||||||||| |||||    
T  494312 aatctaacaccctatcatcataataattcattcaattatataagtatgtcatcattatcaacatcaacatcaaatggtact-aaaaccaacaacaacgac 494214  T
Q  261 tcatgcaacaacccgact 278  Q
    ||||||||| || |||||    
T  494213 tcatgcaaccactcgact 494196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 6e-31; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 146852 - 146971
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||   ||||| |||||||||||||||    
T  146852 tcatcaattgaatctaacaccctaacataataataattcatcaatatataattatgtcatcattaacaacatcaacaataaatggtaattaaaaccaaca 146951  T
Q  253 acgacgactcatgcaacaac 272  Q
    ||  ||||||||| ||||||    
T  146952 acatcgactcatgaaacaac 146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 197770 - 197654
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||||||||||  |||||| ||||||||||||||     
T  197770 tcatcaattgaatctaacaccctatcataataacaattcatcaatatataagaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaac- 197672  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  197671 acatcgactcatgcaaca 197654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 258345 - 258459
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  ||||||  |||||||||||||||    
T  258345 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggcaattaaaaccaacaa 258444  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  258445 catcgactcatgcaa 258459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 251729 - 251845
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||| | |||||||||||||  |||||| |||||||| |||||||||| ||||||||||||||||||||||||  |||||| || ||| ||||||||    
T  251729 tcatcaaatgaatctaacaccctaacataattataattcaccaatatataaatatatcatcattaacaacatcaacaacaaatggtatttataaccaaca 251828  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  251829 acatcgactcatgcaac 251845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 57103 - 56979
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | |||||  |||| || ||| |||||||| | |||| || ||| |||||||    
T  57103 tcatcaattgaatctaacaccctaacataataataattattcaatataaatgtatatttcataatcaac-acatcaacaacaatggtatttacaaccaac 57005  T
Q  252 aacgacgactcatgcaacaacccgac 277  Q
    ||| | ||||||||||||||| ||||    
T  57004 aacaaagactcatgcaacaactcgac 56979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 47089 - 46972
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||  ||||| ||||||||| |||||||  |||||| |||||||||||||||    
T  47089 tcatcaattgaatctaacaccctatcataataataattcttcaatatataaaaatatcctcattaacatcatcaacaacaaatggtaattaaaaccaaca 46990  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  46989 acatcgactcatgcaaca 46972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 51362 - 51245
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||  ||||| ||||||||| |||||||  |||||| |||||||||||||||    
T  51362 tcatcaattgaatctaacaccctatcataataataattcttcaatatataaaaatatcctcattaacatcatcaacaacaaatggtaattaaaaccaaca 51263  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  51262 acatcgactcatgcaaca 51245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 36016 - 36072
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat 211  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | ||||||    
T  36016 tcatcaattgaatctaacaccctaacataataataattagtcaatataaatgtatat 36072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 4691 - 4574
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||  |||||| ||||||||    
T  4691 tcatcaattgaatctaacaccctaacataataataattcatcaacatataaatatatcatcattaacaacatcaacaacaaatcgtaattataaccaaca 4592  T
Q  253 acgacgactcatgcaaca 270  Q
    ||   |||||||||||||    
T  4591 acatggactcatgcaaca 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 2057 - 1940
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| ||||||||||| ||||| |||||||||  |||||||||||| ||||||||||  |||||| ||||||||||||||     
T  2057 tcatcaattgaatctaacaccctatcataataatatttcatgaatatataaaaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaacg 1958  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  1957 acatcgactcatgcaaca 1940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 13732 - 13791
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaaca 225  Q
    ||||||||||||| |||| ||||| |||||||| | |||||||||| |||||||| |||||    
T  13732 aatctaacaccctatcatcataatcattcatcagt-tataagtataacatcattagcaaca 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 55762 - 55876
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  ||||||  |||||||||||||||    
T  55762 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggcaattaaaaccaacaa 55861  T
Q  254 cgacgactcatgcaa 268  Q
    |  ||||||||||||    
T  55862 catcgactcatgcaa 55876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 17217 - 17101
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||| ||||||||||| ||| |||||   |||||||||||| ||||||||||  |||||| ||||||||||||||||    
T  17217 catcaattgaatctaacaccctatcatcataataattcaccaacatatataaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaacaa 17118  T
Q  254 cgacgactcatgcaaca 270  Q
    |  ||||||||||||||    
T  17117 catcgactcatgcaaca 17101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 38195 - 38295
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||||  |||||| ||||||||||||||||    
T  38195 catcaattgaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaacaa 38294  T
Q  254 c 254  Q
    |    
T  38295 c 38295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 57564 - 57448
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||| || |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||   ||| | |||||| ||||||||    
T  57564 tcatcagttgaatctaacaccctaacataataataattcatcaatatataaatatatcatcattaaccacatcaacaataaacggtaattataaccaaca 57465  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  57464 acatcgactcatgcaac 57448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 141069 - 141185
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    |||||| || |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||   ||| | |||||| ||||||||    
T  141069 tcatcagttgaatctaacaccctaacataataataattcatcaatatataaatatatcatcattaaccacatcaacaataaacggtaattataaccaaca 141168  T
Q  253 acgacgactcatgcaac 269  Q
    ||  |||||||||||||    
T  141169 acatcgactcatgcaac 141185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 3035 - 2979
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat 211  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | ||||||    
T  3035 tcatcaattgaatctaacaccctaacataataataattattcaatataaatgtatat 2979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 265
Target Start/End: Complemental strand, 24121 - 24010
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||||   |||||||||||| || |||||||  |||||| ||||||||||||||||    
T  24121 catcaattgaatccaacaccctatcataataataattcatcaatatatataaatatcatcattatcagcatcaacaacaaatggtaattaaaaccaacaa 24022  T
Q  254 cgacgactcatg 265  Q
    |  |||||||||    
T  24021 catcgactcatg 24010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 18496 - 18380
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| ||||||||||||| | ||||||| |||||||||||||||||| |||  ||| ||| ||||||||||   ||||| ||||||||||||||     
T  18496 tcatcaattgaatctaacaccctatgataataacaattcatcaatatataagaataagatccttatcaacatcaacaaaaaatggtaattaaaaccaac- 18398  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  18397 acctcgactcatgcaaca 18380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 8360 - 8242
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacat---caaccaaatgataattaaaaccaac 251  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||  | |||||||||| ||||||   |||| ||||| |||||||| |||||    
T  8360 tcatcaattgaatctaacaccctatcataataataattcatcaatatacaaaaacatcatcattatcaacatcaacaacaaaatggtaattaaagccaac 8261  T
Q  252 aacgacgactcatgcaaca 270  Q
    | |  ||||||||||||||    
T  8260 atcttcgactcatgcaaca 8242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 29398 - 29513
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatca--accaaatgataatt-aaaaccaaca 252  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||   |||||||||||| ||||||||  | |||||| ||||| ||||||||||    
T  29398 catcaattaaatctaacaccctatcataataataattcatcaacatatataaatatcatcattatcaacatcatcaacaaatggtaattaaaaaccaaca 29497  T
Q  253 acgacgactcatgcaa 268  Q
    |   ||||||||||||    
T  29498 atatcgactcatgcaa 29513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 5291 - 5225
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaac 221  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  5291 tcatcaattgaatctaacaccctaacataataataattcatcaatatataaatatatcatcattaac 5225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 10743 - 10860
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| ||||||||||||||| | |||| |||||  |||||||    
T  10743 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattaacaacatcaacaataatggtaatttcaaccaac 10842  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  10843 aacaacgactcatgcaac 10860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 8276 - 8376
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||| | |||||||||||||| ||||| |||||   |||||||||||| ||||||||||  |||||| ||||||||||||||||    
T  8276 catcaattgaatctaacaccttatcataataataatttatcaacatatataaatatcatcattatcaacatcaacaacaaatggtaattaaaaccaacaa 8375  T
Q  254 c 254  Q
    |    
T  8376 c 8376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 6441 - 6557
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||| || ||||||| | ||| ||||||||||   |||||  ||||| ||||||||    
T  6441 tcatcaattgaatctaacaccctaacataataataattcatcaatataaaaatatatcacctttatcaacatcaacaataaatg-gaattataaccaaca 6539  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  6540 acatcgactcatgcaaca 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 39029 - 38913
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||| |||  ||||||| ||||| ||||||||||   |||||| ||||| |||||||     
T  39029 tcatcaattgaatctaacaccctaacataataataattcatcaatacatagatatatcaccattatcaacatcaacaataaatga-aattataaccaacg 38931  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  38930 acatcgactcatgcaaca 38913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 137089 - 136973
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||| |||  ||||||| ||||| ||||||||||   |||||| ||||| |||||||     
T  137089 tcatcaattgaatctaacaccctaacataataataattcatcaatacatagatatatcaccattatcaacatcaacaataaatga-aattataaccaacg 136991  T
Q  253 acgacgactcatgcaaca 270  Q
    ||  ||||||||||||||    
T  136990 acatcgactcatgcaaca 136973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 7115 - 7223
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagta-tatcatcattaacaacatcaacc--aaatgataattaaaaccaacaacgacgact 261  Q
    ||||||||||||| |||| ||||  ||||||||| |||||  || ||||||||||||||||||||||   |||||| |||||||||||| ||| ||||||    
T  7115 aatctaacaccctatcatcataaccattcatcaacatatatataatatcatcattaacaacatcaacggtaaatgacaattaaaaccaataacaacgact 7214  T
Q  262 catgcaaca 270  Q
    |||||||||    
T  7215 catgcaaca 7223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 27725 - 27831
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaacgacgactc 262  Q
    ||||||||||||| |||||||||||||||||||| |||| |  |||||||||||| |||||||||| ||||  | ||||||||||||| |||  | ||||    
T  27725 aatctaacaccctatcataataataattcatcaacatat-ataatatcatcattatcaacatcaacaaaattcggtaattaaaaccaataactgcaactc 27823  T
Q  263 atgcaaca 270  Q
    ||||||||    
T  27824 atgcaaca 27831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 20650 - 20724
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    |||||||| ||||||||||||| |||||||||||| ||||||| |||||   |||||||||||| ||||||||||    
T  20650 catcaattgaatctaacaccctatcataataataaatcatcaacatatataaatatcatcattaccaacatcaac 20724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 8265 - 8381
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| |||||| ||||||||||||| |||||   ||||| |||||| ||||||||||  |||||| ||| ||| ||||| ||    
T  8265 catcaattgaatctaacaccctatcataaaaataattcatcaacatatataaatatcttcattatcaacatcaacaacaaatggtaaataagaccaataa 8364  T
Q  254 cgacgactcatgcaaca 270  Q
    |  | ||||||||||||    
T  8365 ctgcaactcatgcaaca 8381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 172131 - 172021
Alignment:
Q  165 aatctaacaccctgtcataataataat---tcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgacga 259  Q
    ||||||||||||| |||||||||||||   |||||||||||||   |||||||||||  ||||||||||  |||| | |||||||||||||||||  | |    
T  172131 aatctaacaccctatcataataataataattcatcaatatatataaatatcatcattttcaacatcaacaacaaacggtaattaaaaccaacaacttcaa 172032  T
Q  260 ctcatgcaaca 270  Q
    |||||||||||    
T  172031 ctcatgcaaca 172021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 2085 - 2201
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat-catcattaacaacatcaacca-aatgataattaaaaccaaca 252  Q
    ||||||||| |||||||||||||  ||||  |||| || ||||||||| |  ||||| ||| || |||||||||||| | ||||||||||| ||||||||    
T  2085 tcatcaattgaatctaacaccctaacatatcaatagttaatcaatatacatatatattcataatcaacaacatcaacaataatgataattacaaccaaca 2184  T
Q  253 acgacgactcatgcaac 269  Q
    || ||||||||||||||    
T  2185 acaacgactcatgcaac 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 183 - 300
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||  |||| || ||||||||| |  |||||  ||| || |||||||||||| | ||||||||||| |||||||    
T  183 tcatcaattgaatctaacaccctaacatatcaatatttaatcaatatacatatatatttcataatcaacaacatcaacaataatgataattacaaccaac 282  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| || |||||||||||    
T  283 aacaacaactcatgcaac 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 1139 - 1021
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| |||| |||||||||| | |||| |||||| |||||||    
T  1139 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattagcaacatcaacaataatggtaattacaaccaac 1040  T
Q  252 aacgacgactcatgcaaca 270  Q
    ||| | |||||||||||||    
T  1039 aacaatgactcatgcaaca 1021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 6238 - 6116
Alignment:
Q  151 taactcatcaatta-aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaac 247  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||| |||||   | |||||||| | ||||||||||  |||| | ||| | ||||    
T  6238 taactcatcaatttgaatctaacaccctatcataataataattcatcaacatatataaacatcatcatcatcaacatcaacgacaaaaggtaaatgaaac 6139  T
Q  248 caacaacgacgactcatgcaaca 270  Q
    ||||| |  ||||||||||||||    
T  6138 caacaccatcgactcatgcaaca 6116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 356 - 239
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaaccaaa-tgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||| ||  |||||||| |  |||||  ||| || |||||||||||| ||| || |||||| |||||||    
T  356 tcatcaattgaatctaacaccctaacataataatagttattcaatataaatatatatttcataatcaacaacatcaacaaaaatggtaattacaaccaac 257  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  256 aacaacgactcatgcaac 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 7003 - 6892
Alignment:
Q  160 aattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgac 257  Q
    |||| |||||||||||||  |||| ||||||||||||| ||||||| ||||||| ||| | ||||||||||   |||||  ||||| ||||||||||  |    
T  7003 aattgaatctaacaccctaacatagtaataattcatcattatataaatatatcaccatcatcaacatcaacaataaatg-gaattataaccaacaacatc 6905  T
Q  258 gactcatgcaaca 270  Q
    |||||||||||||    
T  6904 gactcatgcaaca 6892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 846 - 774
Alignment:
Q  158 tcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    |||||| |||||||||||||  |||| ||||||||||||| ||||||| ||||||| ||| | ||||||||||    
T  846 tcaattgaatctaacaccctaacatagtaataattcatcattatataaatatatcaccatcatcaacatcaac 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 320915 - 321031
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaat--gataattaaaaccaacaa 253  Q
    |||||||| ||||||||||||| ||||||||||| |||||||| |||||   | |||||||||  |||||||||| | ||  | ||||||||||||| ||    
T  320915 catcaattgaatctaacaccctatcataataatatttcatcaacatatataaacatcatcattttcaacatcaacaacattcggtaattaaaaccaataa 321014  T
Q  254 cgacgactcatgcaaca 270  Q
    |  | ||||||||||||    
T  321015 ctgcaactcatgcaaca 321031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 326624 - 326698
Alignment:
Q  156 catcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    |||||||| ||||||||||| | ||||||||||| |||||||| |||||   | |||||||||  ||||||||||    
T  326624 catcaattgaatctaacaccatatcataataatatttcatcaacatatataaacatcatcattttcaacatcaac 326698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 1607 - 1493
Alignment:
Q  158 tcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca-aatgataattaaaaccaacaac 254  Q
    |||||| ||||||| |||||  |||||||||||||  |||||||| |  |||||  ||| || |||||||||||| | |||| |||||| ||||||||||    
T  1607 tcaattgaatctaataccctaacataataataattattcaatataaatatatatttcataatcaacaacatcaacaataatggtaattacaaccaacaac 1508  T
Q  255 gacgactcatgcaac 269  Q
     ||||||||||||||    
T  1507 aacgactcatgcaac 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 2659 - 2548
Alignment:
Q  165 aatctaacaccctgtcataataataat---tcatcaatatataagt--atatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgac 257  Q
    ||||||||||||| |||||||||||||   |||||||||||||  |  |||||||||||  ||||||||||  |||| | |||||||||||||||||  |    
T  2659 aatctaacaccctatcataataataataattcatcaatatatatataaatatcatcattttcaacatcaacaacaaacggtaattaaaaccaacaacttc 2560  T
Q  258 gactcatgcaac 269  Q
     |||||||||||    
T  2559 aactcatgcaac 2548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 17415 - 17304
Alignment:
Q  165 aatctaacaccctgtcataataataat---tcatcaatatataagt--atatcatcattaacaacatcaac--caaatgataattaaaaccaacaacgac 257  Q
    ||||||||||||| |||||||||||||   |||||||||||||  |  |||||||||||  ||||||||||  |||| | |||||||||||||||||  |    
T  17415 aatctaacaccctatcataataataataattcatcaatatatatataaatatcatcattttcaacatcaacaacaaacggtaattaaaaccaacaacttc 17316  T
Q  258 gactcatgcaac 269  Q
     |||||||||||    
T  17315 aactcatgcaac 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 16797 - 16836
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatata 204  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  16797 aatctaacaccctatcataataataattcatcaatatata 16836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 157077 - 157018
Alignment:
Q  170 aacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaa 229  Q
    |||||||| |||||||||||||||||||| |||||   |||||||||||| |||||||||    
T  157077 aacaccctctcataataataattcatcaacatatataaatatcatcattatcaacatcaa 157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 4523 - 4457
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaa-tatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||||||| |||| ||||||||||||||| ||||  ||||||  ||||||||||||||||||    
T  4523 aatctaacaccctatcatcataataattcatcaattataagagtataatatcattaacaacatcaac 4457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 5361 - 5431
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaaca 225  Q
    ||||||||| |||||||||||||  |||||||||||||||||||  ||||  ||||||| ||||| |||||    
T  5361 tcatcaattgaatctaacaccctaacataataataattcatcaaggtatagatatatcaccattatcaaca 5431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 1698 - 1581
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||||  |||  ||| |||| ||||||||||||||| |  ||| |||||| |||||||    
T  1698 tcatcaattgaatctaacaccctaacataacaataattattcaatatacatatatatctcataattaacaacatcaacaattatggtaattacaaccaac 1599  T
Q  252 aacgacgactcatgcaac 269  Q
    |||  |||||||||||||    
T  1598 aacagcgactcatgcaac 1581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 19640 - 19756
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| ||||||||||||| ||||||||||||||  |||||||  |||  ||| |||| ||||||||| ||||| | |||| |||||  |||||||    
T  19640 tcatcaattgaatctaacaccctatcataataataattattcaatatacatatatatttcataattaacaacttcaacaataatggtaatttcaaccaac 19739  T
Q  252 aacgacgactcatgcaac 269  Q
     || ||||||||||||||    
T  19740 -acaacgactcatgcaac 19756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 56287 - 56170
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  | |||||  |||  ||| |||| || |||||||||||| | |||| || ||| |||||||    
T  56287 tcatcaattgaatctaacaccctaacataataataattattaaatataaatatatatttcataatcaacaacatcaacaataatggtatttacaaccaac 56188  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  56187 aacaacgactcatgcaac 56170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 13733 - 13630
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaaccaaatgataattaaaaccaacaacgacgactcat 264  Q
    ||||||||||||| |||||||||||||||||||| |||||   | ||||| || |||| || ||| |||||| ||| ||| ||||||| |  ||||||||    
T  13733 aatctaacaccctatcataataataattcatcaacatatataaagatcattatcaacatcaacaa-caaatggtaaataagaccaacaccatcgactcat 13635  T
Q  265 gcaac 269  Q
    |||||    
T  13634 gcaac 13630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 9360 - 9478
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatca--accaaatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| |||||||||||||  |  || || |||||  ||||||    
T  9360 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattaacaacatcatcaataagtggtaatttcaaccaa 9459  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  9460 caacaacgactcatgcaac 9478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 13433 - 13551
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatat--ataagtatatcatcattaacaacatca--accaaatgataattaaaaccaa 250  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||  |||  ||| |||| |||||||||||||  |  || || |||||  ||||||    
T  13433 tcatcaattgaatctaacaccctaacataataataattattcaatatacatatatatttcataattaacaacatcatcaataagtggtaatttcaaccaa 13532  T
Q  251 caacgacgactcatgcaac 269  Q
    |||| ||||||||||||||    
T  13533 caacaacgactcatgcaac 13551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 45382 - 45454
Alignment:
Q  198 atatataagtatatcatcattaacaacatcaacca-aatgataattaaaaccaacaacgacgactcatgcaac 269  Q
    |||||||  ||| |||| ||||||||||||||| | |||| |||||| |||||||||| ||||||||||||||    
T  45382 atatatatatatttcataattaacaacatcaacaataatggtaattacaaccaacaacaacgactcatgcaac 45454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 70947 - 70986
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatata 204  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  70947 aatctaacaccctatcataataataattcatcaacatata 70986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 7471 - 7355
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtata--tcatcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | |||||  |||| || ||| |||||||| | |||| || ||| |||||||    
T  7471 tcatcaattgaatctaacaccctaacataataataattattcaatataaatgtatatttcataatcaac-acatcaacaacaatggtatttacaaccaac 7373  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| | ||||||||||||    
T  7372 aacaatgactcatgcaac 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 208127 - 208010
Alignment:
Q  155 tcatcaattaaatctaacaccctgtcataataataattcatcaatatataagtatat--catcattaacaacatcaacca-aatgataattaaaaccaac 251  Q
    ||||||||| ||||||| |||||  ||||  ||||||| ||||| ||| |  |||||  ||| || |||||||||||| | |||| |||||| |||||||    
T  208127 tcatcaattgaatctaagaccctaacatatcaataattaatcaacatacatatatatttcataatcaacaacatcaacaataatggtaattacaaccaac 208028  T
Q  252 aacgacgactcatgcaac 269  Q
    ||| ||||||||||||||    
T  208027 aacaacgactcatgcaac 208010  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 7115 - 7179
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaac 230  Q
    ||||||||||||| |||||| || |||||||||| |||| |  |||||||||||| ||||||||||    
T  7115 aatctaacaccctatcataacaacaattcatcaacatat-ataatatcatcattatcaacatcaac 7179  T

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Target: scaffold0222 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 5322 - 5289
Alignment:
Q  166 atctaacaccctgtcataataataattcatcaat 199  Q
    |||||||||||| |||||||||||||||||||||    
T  5322 atctaacaccctatcataataataattcatcaat 5289  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 52015 - 51951
Alignment:
Q  165 aatctaacaccctgtcataataataattcatcaatatataagtatatcatcattaacaacatcaa 229  Q
    ||||||||||||| |||||| ||||||||||||| |||||   | |||| ||||| |||||||||    
T  52015 aatctaacaccctatcataaaaataattcatcaacatatataaacatcaccattatcaacatcaa 51951  T

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