View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0768_low_37 (Length: 331)

Name: NF0768_low_37
Description: NF0768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0768_low_37
NF0768_low_37
[»] chr4 (44 HSPs)
chr4 (2-255)||(11101344-11101595)
chr4 (4-38)||(51458678-51458712)
chr4 (4-41)||(2186360-2186397)
chr4 (4-41)||(9946424-9946461)
chr4 (4-41)||(24885827-24885864)
chr4 (4-41)||(35021494-35021531)
chr4 (4-41)||(38340347-38340384)
chr4 (4-41)||(52270057-52270094)
chr4 (4-40)||(5924647-5924683)
chr4 (4-38)||(8464102-8464136)
chr4 (4-38)||(10564492-10564526)
chr4 (4-38)||(19854565-19854599)
chr4 (4-38)||(20383488-20383522)
chr4 (11-41)||(23809946-23809976)
chr4 (4-38)||(24479339-24479373)
chr4 (4-41)||(2430994-2431031)
chr4 (4-41)||(7230277-7230314)
chr4 (4-41)||(9539220-9539257)
chr4 (4-41)||(9913896-9913933)
chr4 (4-41)||(10082399-10082436)
chr4 (4-41)||(10303538-10303575)
chr4 (4-41)||(11198761-11198798)
chr4 (4-37)||(11949790-11949823)
chr4 (4-41)||(12322670-12322707)
chr4 (4-41)||(15849231-15849268)
chr4 (4-41)||(19588151-19588188)
chr4 (4-41)||(20799421-20799458)
chr4 (4-41)||(21052584-21052621)
chr4 (4-41)||(24665018-24665055)
chr4 (4-41)||(32139336-32139373)
chr4 (4-41)||(32180827-32180864)
chr4 (4-41)||(35287534-35287571)
chr4 (4-41)||(38453262-38453299)
chr4 (4-41)||(39171397-39171434)
chr4 (4-41)||(43034369-43034406)
chr4 (4-41)||(43374299-43374336)
chr4 (4-41)||(47814278-47814315)
chr4 (4-41)||(50362166-50362203)
chr4 (10-38)||(2580733-2580761)
chr4 (4-40)||(4138544-4138580)
chr4 (4-40)||(10497257-10497293)
chr4 (4-40)||(16431614-16431650)
chr4 (4-48)||(22411754-22411798)
chr4 (4-40)||(55421596-55421632)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-41)||(223155-223192)
scaffold0011 (4-41)||(185260-185297)
[»] chr2 (45 HSPs)
chr2 (4-41)||(22523039-22523076)
chr2 (4-41)||(8761591-8761628)
chr2 (4-41)||(9383236-9383273)
chr2 (4-41)||(27934884-27934921)
chr2 (4-41)||(32513671-32513708)
chr2 (10-47)||(36648823-36648860)
chr2 (4-41)||(44496727-44496764)
chr2 (4-41)||(44526125-44526162)
chr2 (4-43)||(7350541-7350580)
chr2 (4-39)||(10156016-10156051)
chr2 (10-40)||(42066710-42066740)
chr2 (4-41)||(2256968-2257005)
chr2 (4-41)||(4122040-4122077)
chr2 (4-41)||(9842229-9842266)
chr2 (4-41)||(10109673-10109710)
chr2 (4-41)||(14414922-14414959)
chr2 (4-41)||(15381630-15381667)
chr2 (4-41)||(16877121-16877158)
chr2 (4-41)||(16989252-16989289)
chr2 (4-41)||(17736790-17736827)
chr2 (4-41)||(19976150-19976187)
chr2 (4-41)||(20455888-20455925)
chr2 (4-41)||(20565102-20565139)
chr2 (4-41)||(25598589-25598626)
chr2 (4-41)||(29798544-29798581)
chr2 (4-41)||(32063615-32063652)
chr2 (4-41)||(33063983-33064020)
chr2 (4-41)||(34464436-34464473)
chr2 (4-41)||(34977201-34977238)
chr2 (4-41)||(35820328-35820365)
chr2 (4-41)||(36171525-36171562)
chr2 (10-47)||(36615066-36615103)
chr2 (4-41)||(40365433-40365470)
chr2 (4-41)||(40896536-40896573)
chr2 (4-41)||(41187484-41187521)
chr2 (4-41)||(42714436-42714473)
chr2 (4-40)||(5842160-5842196)
chr2 (4-40)||(11953944-11953980)
chr2 (12-40)||(15333123-15333151)
chr2 (5-41)||(15447748-15447784)
chr2 (4-40)||(34685991-34686027)
chr2 (4-40)||(34708412-34708448)
chr2 (4-40)||(41204528-41204564)
chr2 (5-41)||(41763906-41763942)
chr2 (4-36)||(43826469-43826501)
[»] chr8 (29 HSPs)
chr8 (10-45)||(10297634-10297669)
chr8 (4-41)||(19163563-19163600)
chr8 (4-38)||(2554239-2554273)
chr8 (4-38)||(30427731-30427765)
chr8 (10-47)||(2188537-2188574)
chr8 (4-41)||(2958422-2958459)
chr8 (4-41)||(7380041-7380078)
chr8 (4-41)||(8137932-8137969)
chr8 (4-41)||(8717502-8717539)
chr8 (4-41)||(11708983-11709020)
chr8 (4-41)||(13286128-13286165)
chr8 (4-41)||(13357468-13357505)
chr8 (4-41)||(17704010-17704047)
chr8 (4-41)||(23852908-23852945)
chr8 (4-41)||(27718921-27718958)
chr8 (4-41)||(29499768-29499805)
chr8 (4-41)||(33451376-33451413)
chr8 (4-41)||(35682719-35682756)
chr8 (4-41)||(37570780-37570817)
chr8 (4-41)||(39433407-39433444)
chr8 (4-41)||(39821881-39821918)
chr8 (4-41)||(43962051-43962088)
chr8 (4-41)||(44293572-44293609)
chr8 (5-41)||(8639907-8639943)
chr8 (4-40)||(10982724-10982760)
chr8 (4-40)||(13004163-13004199)
chr8 (4-40)||(35103104-35103140)
chr8 (4-40)||(36781406-36781442)
chr8 (4-40)||(37872975-37873011)
[»] chr5 (45 HSPs)
chr5 (4-38)||(20927639-20927673)
chr5 (4-41)||(10199016-10199053)
chr5 (4-41)||(28207129-28207166)
chr5 (4-41)||(32283576-32283613)
chr5 (4-41)||(37932327-37932364)
chr5 (4-40)||(36818931-36818967)
chr5 (4-39)||(6375522-6375557)
chr5 (10-41)||(20175722-20175753)
chr5 (4-39)||(26409252-26409287)
chr5 (4-38)||(10704358-10704392)
chr5 (4-37)||(1488365-1488398)
chr5 (4-41)||(3445274-3445311)
chr5 (4-41)||(4573086-4573123)
chr5 (4-41)||(5485183-5485220)
chr5 (4-41)||(6489004-6489041)
chr5 (4-41)||(6624773-6624810)
chr5 (10-39)||(8902809-8902838)
chr5 (4-41)||(11637599-11637636)
chr5 (4-41)||(13864341-13864378)
chr5 (4-41)||(13880193-13880230)
chr5 (4-41)||(15889408-15889445)
chr5 (4-41)||(16036824-16036861)
chr5 (4-41)||(16133092-16133129)
chr5 (4-41)||(17046331-17046368)
chr5 (4-41)||(17261788-17261825)
chr5 (4-41)||(19248476-19248513)
chr5 (4-41)||(22522828-22522865)
chr5 (4-41)||(22619871-22619908)
chr5 (4-41)||(24485696-24485733)
chr5 (4-41)||(29178444-29178481)
chr5 (4-41)||(31561371-31561408)
chr5 (4-41)||(32858667-32858704)
chr5 (4-41)||(33133636-33133673)
chr5 (4-41)||(33369440-33369477)
chr5 (4-41)||(34436848-34436885)
chr5 (4-41)||(36321521-36321558)
chr5 (4-41)||(38534657-38534694)
chr5 (4-41)||(39610368-39610405)
chr5 (4-45)||(39800063-39800104)
chr5 (4-41)||(39980505-39980542)
chr5 (4-41)||(42505869-42505906)
chr5 (4-40)||(10032301-10032337)
chr5 (4-48)||(17861969-17862013)
chr5 (5-41)||(22555228-22555264)
chr5 (4-40)||(41650966-41651002)
[»] scaffold0118 (2 HSPs)
scaffold0118 (4-41)||(39995-40032)
scaffold0118 (4-41)||(45409-45446)
[»] chr7 (35 HSPs)
chr7 (4-41)||(5352326-5352363)
chr7 (4-41)||(5526722-5526759)
chr7 (4-41)||(10244724-10244761)
chr7 (4-41)||(19416511-19416548)
chr7 (4-41)||(20243252-20243289)
chr7 (4-41)||(38728205-38728242)
chr7 (4-41)||(39801703-39801740)
chr7 (4-41)||(40752866-40752903)
chr7 (4-41)||(48980484-48980521)
chr7 (5-41)||(31038550-31038586)
chr7 (4-35)||(26471219-26471250)
chr7 (4-35)||(26547659-26547690)
chr7 (4-38)||(42043093-42043127)
chr7 (4-41)||(580953-580990)
chr7 (4-41)||(1120058-1120095)
chr7 (4-41)||(3953438-3953475)
chr7 (4-41)||(4227555-4227592)
chr7 (4-41)||(7705067-7705104)
chr7 (4-41)||(8683067-8683104)
chr7 (4-41)||(8883550-8883587)
chr7 (4-41)||(11373669-11373706)
chr7 (4-45)||(13044169-13044210)
chr7 (4-41)||(18505684-18505721)
chr7 (4-41)||(21993179-21993216)
chr7 (4-41)||(27462463-27462500)
chr7 (4-41)||(35142176-35142213)
chr7 (4-41)||(38088044-38088081)
chr7 (4-37)||(38841988-38842021)
chr7 (4-41)||(41527557-41527594)
chr7 (4-41)||(44558801-44558838)
chr7 (4-41)||(46207757-46207794)
chr7 (4-41)||(47342674-47342711)
chr7 (4-41)||(47589580-47589617)
chr7 (4-36)||(21286352-21286384)
chr7 (4-40)||(46220977-46221013)
[»] chr6 (25 HSPs)
chr6 (4-41)||(4494898-4494935)
chr6 (4-41)||(5655334-5655371)
chr6 (4-45)||(11982544-11982585)
chr6 (4-41)||(20744135-20744172)
chr6 (4-41)||(32053785-32053822)
chr6 (4-40)||(26320590-26320626)
chr6 (10-41)||(17382081-17382112)
chr6 (4-39)||(26400863-26400898)
chr6 (10-40)||(7989223-7989253)
chr6 (4-38)||(14296984-14297018)
chr6 (4-41)||(2108722-2108759)
chr6 (4-41)||(5271390-5271427)
chr6 (4-41)||(8810637-8810674)
chr6 (4-41)||(9558445-9558482)
chr6 (4-41)||(9677232-9677269)
chr6 (4-41)||(10780134-10780171)
chr6 (4-41)||(12333595-12333632)
chr6 (4-41)||(13376309-13376346)
chr6 (4-37)||(21847195-21847228)
chr6 (4-41)||(24269880-24269917)
chr6 (4-41)||(29740479-29740516)
chr6 (4-41)||(33938706-33938743)
chr6 (4-41)||(34828303-34828340)
chr6 (4-40)||(16130763-16130799)
chr6 (4-40)||(20720808-20720844)
[»] chr3 (38 HSPs)
chr3 (4-41)||(10498722-10498759)
chr3 (4-41)||(14827522-14827559)
chr3 (4-41)||(21506785-21506822)
chr3 (4-41)||(25340951-25340988)
chr3 (4-41)||(27185474-27185511)
chr3 (4-41)||(39481138-39481175)
chr3 (4-41)||(44579633-44579670)
chr3 (4-41)||(47313399-47313436)
chr3 (4-40)||(32836171-32836207)
chr3 (4-40)||(50037309-50037345)
chr3 (4-43)||(25874125-25874164)
chr3 (4-39)||(32629079-32629114)
chr3 (4-38)||(23148005-23148039)
chr3 (4-38)||(53996299-53996333)
chr3 (4-41)||(1149096-1149133)
chr3 (4-41)||(2186454-2186491)
chr3 (4-41)||(3100218-3100255)
chr3 (4-41)||(5117205-5117242)
chr3 (4-41)||(7557561-7557598)
chr3 (4-41)||(8831372-8831409)
chr3 (4-41)||(16980381-16980418)
chr3 (4-41)||(18870752-18870789)
chr3 (4-41)||(20370308-20370345)
chr3 (4-41)||(21331444-21331481)
chr3 (4-41)||(21914862-21914899)
chr3 (4-37)||(29631187-29631220)
chr3 (4-41)||(32843289-32843326)
chr3 (4-37)||(33404229-33404262)
chr3 (4-41)||(35863840-35863877)
chr3 (4-41)||(43345034-43345071)
chr3 (4-41)||(43490444-43490481)
chr3 (10-43)||(47244414-47244447)
chr3 (4-40)||(7974539-7974575)
chr3 (4-40)||(20413779-20413815)
chr3 (9-41)||(23086041-23086073)
chr3 (4-36)||(24428500-24428532)
chr3 (9-41)||(29687079-29687111)
chr3 (1-41)||(48796242-48796282)
[»] chr1 (49 HSPs)
chr1 (4-41)||(2613719-2613756)
chr1 (4-41)||(24752675-24752712)
chr1 (4-41)||(30895331-30895368)
chr1 (4-41)||(40268207-40268244)
chr1 (4-41)||(42045399-42045436)
chr1 (4-40)||(43611422-43611458)
chr1 (4-39)||(14520943-14520978)
chr1 (10-41)||(17280117-17280148)
chr1 (4-39)||(19620575-19620610)
chr1 (4-39)||(41677617-41677652)
chr1 (4-39)||(42888574-42888609)
chr1 (4-39)||(45140033-45140068)
chr1 (3-41)||(2636781-2636819)
chr1 (4-38)||(8253739-8253773)
chr1 (4-38)||(25086483-25086517)
chr1 (4-42)||(34733396-34733434)
chr1 (4-38)||(48100722-48100756)
chr1 (4-41)||(1794593-1794630)
chr1 (4-41)||(3509968-3510005)
chr1 (4-41)||(6567707-6567744)
chr1 (4-41)||(8269395-8269432)
chr1 (4-41)||(13590107-13590144)
chr1 (4-41)||(15602204-15602241)
chr1 (4-41)||(16826351-16826388)
chr1 (4-41)||(17139544-17139581)
chr1 (4-37)||(17188695-17188728)
chr1 (4-41)||(17201233-17201270)
chr1 (4-41)||(21400050-21400087)
chr1 (4-41)||(24162789-24162826)
chr1 (4-41)||(24695556-24695593)
chr1 (4-41)||(25532970-25533007)
chr1 (4-41)||(26803478-26803515)
chr1 (4-41)||(27172749-27172786)
chr1 (4-41)||(29451009-29451046)
chr1 (4-37)||(34142391-34142424)
chr1 (4-41)||(39452457-39452494)
chr1 (4-37)||(40227830-40227863)
chr1 (4-37)||(43426181-43426214)
chr1 (4-41)||(48681960-48681997)
chr1 (4-41)||(49183170-49183207)
chr1 (12-41)||(51831271-51831300)
chr1 (4-41)||(52441538-52441575)
chr1 (4-40)||(10356210-10356246)
chr1 (13-41)||(12364141-12364169)
chr1 (4-40)||(26498059-26498095)
chr1 (4-40)||(39252284-39252320)
chr1 (4-40)||(40938478-40938514)
chr1 (4-36)||(44718085-44718117)
chr1 (5-41)||(47692933-47692969)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-40)||(47268-47304)
[»] scaffold0735 (1 HSPs)
scaffold0735 (4-39)||(1527-1562)
[»] scaffold0040 (2 HSPs)
scaffold0040 (10-41)||(56781-56812)
scaffold0040 (4-41)||(58850-58887)
[»] scaffold0896 (1 HSPs)
scaffold0896 (4-41)||(3138-3175)
[»] scaffold0743 (1 HSPs)
scaffold0743 (4-41)||(1446-1483)
[»] scaffold0458 (1 HSPs)
scaffold0458 (4-41)||(11179-11216)
[»] scaffold0197 (1 HSPs)
scaffold0197 (4-41)||(21782-21819)
[»] scaffold0188 (1 HSPs)
scaffold0188 (4-41)||(28140-28177)
[»] scaffold0180 (1 HSPs)
scaffold0180 (4-41)||(17729-17766)
[»] scaffold0006 (1 HSPs)
scaffold0006 (4-41)||(208939-208976)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-40)||(244477-244513)


Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 2 - 255
Target Start/End: Complemental strand, 11101595 - 11101344
Alignment:
Q  2 tcttatgtattgtccataccaactgagctaagctcacgagtaggacaaaatctctatagtttctcatcaatgacaaaatccctaactcatcactaaaccc 101  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||    
T  11101595 tcttatgtattgtccctaccaactgagctaagttcacgagtaggacaaaatctctatagtttc--atcaataacaaaatctctaactcatcactaaaccc 11101498  T
Q  102 aaaatacctaagatctaatatctcaaaccttctcacatgaacccatcagctagtcaatccttaatctcttaaatcagccgcaaaaccaagtatcagcaaa 201  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11101497 aaaatacctaagatctaatatctcaaaccttctctcttgaacccatcagctagtcaatccttaatctcttaaatcagtcgcaaaaccaagtatcagcaaa 11101398  T
Q  202 gcgcagaggtgatatgaacacggtccttgttgctatttctctaaaaattcattt 255  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  11101397 gcgcacaggtgatatgaacaaggtccttgttgctatttctctaaaaattcattt 11101344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 51458712 - 51458678
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    |||||||||||||||||||||||||||||||||||    
T  51458712 ttatgtattgtccataccaactgagctaagctcac 51458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 2186360 - 2186397
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  2186360 ttatgcattgtccataccaactgagctaagctcacgag 2186397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 9946461 - 9946424
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  9946461 ttatgcattgtccataccaactgagctaagctcacgag 9946424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24885827 - 24885864
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  24885827 ttatgtattgtccataccaactgagttaagctcacgag 24885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 35021494 - 35021531
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||||| |||||||||||||||||||||    
T  35021494 ttatgtattgtccatatcaactgagctaagctcacgag 35021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 38340347 - 38340384
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  38340347 ttatgtattgtccataccaactgagttaagctcacgag 38340384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 52270057 - 52270094
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  52270057 ttatgcattgtccataccaactgagctaagctcacgag 52270094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 5924683 - 5924647
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5924683 ttatgtattgtccatagcaactgagctaagctcacga 5924647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 8464102 - 8464136
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||||||||||| |||||||||||||||||||||    
T  8464102 ttatgtattgtccttaccaactgagctaagctcac 8464136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 10564492 - 10564526
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||||||||||||||||||||||||||| |||||    
T  10564492 ttatgtattgtccataccaactgagctaaactcac 10564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 19854599 - 19854565
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  19854599 ttatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 20383522 - 20383488
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  20383522 ttatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 23809976 - 23809946
Alignment:
Q  11 ttgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||||||||||||||||||||    
T  23809976 ttgtccataccaactgagctaagctcacgag 23809946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 24479339 - 24479373
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  24479339 ttatgcattgtccataccaactgagctaagctcac 24479373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2431031 - 2430994
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  2431031 ttatgtattgtcaataccaactgagctaaactcacgag 2430994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 7230314 - 7230277
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  7230314 ttatgcattgtccttaccaactgagctaagctcacgag 7230277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 9539220 - 9539257
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  9539220 ttatgcattgtccataacaactgagctaagctcacgag 9539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 9913933 - 9913896
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  9913933 ttatgcattgttcataccaactgagctaagctcacgag 9913896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10082436 - 10082399
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  10082436 ttatgtattgtccctaccaactgagctaagttcacgag 10082399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10303538 - 10303575
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  10303538 ttatgcattgtccttaccaactgagctaagctcacgag 10303575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11198798 - 11198761
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  11198798 ttatgcattctccataccaactgagctaagctcacgag 11198761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 11949790 - 11949823
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  11949790 ttatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 12322707 - 12322670
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  12322707 ttatgcattgtccgtaccaactgagctaagctcacgag 12322670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 15849268 - 15849231
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  15849268 ttatgcattatccataccaactgagctaagctcacgag 15849231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19588188 - 19588151
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  19588188 ttatgcattgtccataccaattgagctaagctcacgag 19588151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 20799421 - 20799458
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  20799421 ttatgcattgtccctaccaactgagctaagctcacgag 20799458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21052584 - 21052621
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  21052584 ttatgtattatccataccaactgagctaaactcacgag 21052621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24665018 - 24665055
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  24665018 ttatgcattctccataccaactgagctaagctcacgag 24665055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32139373 - 32139336
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| || |||||||||||||||||||||    
T  32139373 ttatgtattgtccctatcaactgagctaagctcacgag 32139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32180864 - 32180827
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  32180864 ttatgcattgtctataccaactgagctaagctcacgag 32180827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 35287534 - 35287571
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  35287534 ttatgcattgttcataccaactgagctaagctcacgag 35287571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 38453299 - 38453262
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  38453299 ttatgcattgtccatgccaactgagctaagctcacgag 38453262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 39171397 - 39171434
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  39171397 ttatgcattgtccatatcaactgagctaagctcacgag 39171434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 43034369 - 43034406
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  43034369 ttatgcattgtccataccaactgagttaagctcacgag 43034406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 43374299 - 43374336
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  43374299 ttatgcattgtccatatcaactgagctaagctcacgag 43374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 47814278 - 47814315
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  47814278 ttatgtgttgtccataccaactgagctaagcttacgag 47814315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 50362166 - 50362203
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  50362166 ttatgcattgtccctaccaactgagctaagctcacgag 50362203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 2580761 - 2580733
Alignment:
Q  10 attgtccataccaactgagctaagctcac 38  Q
    |||||||||||||||||||||||||||||    
T  2580761 attgtccataccaactgagctaagctcac 2580733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 4138580 - 4138544
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  4138580 ttatgcattgtccataccaagtgagctaagctcacga 4138544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 10497293 - 10497257
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  10497293 ttatgcattgtccataccaattgagctaagctcacga 10497257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 16431650 - 16431614
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  16431650 ttatgcattgtccataccaactgagctaagttcacga 16431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 22411798 - 22411754
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagtaggaca 48  Q
    ||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  22411798 ttatgcattgtccataccaactgagctatgctcatgaggaggaca 22411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 55421596 - 55421632
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  55421596 ttatgcattgtccaaaccaactgagctaagctcacga 55421632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 223192 - 223155
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  223192 ttatgtattgtccataccaactgagctaagctcacgag 223155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 185297 - 185260
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  185297 ttatgcattgtccataccaactgagctaagctcacgag 185260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22523039 - 22523076
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22523039 ttatgtattgtccataccaactgagctaagctcacgag 22523076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 8761591 - 8761628
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  8761591 ttatgtattgtccataccaactgagttaagctcacgag 8761628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 9383236 - 9383273
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  9383236 ttatgcattgtccataccaactgagctaagctcacgag 9383273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27934884 - 27934921
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27934884 ttatgtattgtccttaccaactgagctaagctcacgag 27934921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32513708 - 32513671
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32513708 ttatgtattgtccataccacctgagctaagctcacgag 32513671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 36648823 - 36648860
Alignment:
Q  10 attgtccataccaactgagctaagctcacgagtaggac 47  Q
    |||||||||||||||||||||||||||||||| |||||    
T  36648823 attgtccataccaactgagctaagctcacgaggaggac 36648860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44496727 - 44496764
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  44496727 ttatgtattgtccttaccaactgagctaagctcacgag 44496764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 44526162 - 44526125
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  44526162 ttatgcattgtccataccaactgagctaagctcacgag 44526125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 7350580 - 7350541
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagta 43  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  7350580 ttatgcattgtccataccaactgagctaagcttacgagta 7350541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 10156051 - 10156016
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10156051 ttatgtattgtccttaccaactgagctaagctcacg 10156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 42066740 - 42066710
Alignment:
Q  10 attgtccataccaactgagctaagctcacga 40  Q
    |||||||||||||||||||||||||||||||    
T  42066740 attgtccataccaactgagctaagctcacga 42066710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2257005 - 2256968
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  2257005 ttatgcattgtccataccaactgagttaagctcacgag 2256968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4122040 - 4122077
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  4122040 ttatgcattgtccataccagctgagctaagctcacgag 4122077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 9842229 - 9842266
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  9842229 ttatgcattgtccctaccaactgagctaagctcacgag 9842266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10109673 - 10109710
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  10109673 ttatgcattgtccaaaccaactgagctaagctcacgag 10109710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 14414922 - 14414959
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  14414922 ttatgcattgtccataccaactgagttaagctcacgag 14414959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 15381667 - 15381630
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  15381667 ttatgtattgtccctactaactgagctaagctcacgag 15381630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16877158 - 16877121
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  16877158 ttatgcattgtccataccagctgagctaagctcacgag 16877121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16989289 - 16989252
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  16989289 ttatgcattgtccataccagctgagctaagctcacgag 16989252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 17736827 - 17736790
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  17736827 ttatgcattgttcataccaactgagctaagctcacgag 17736790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19976187 - 19976150
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  19976187 ttatgcattgtccataccaactgagctaaactcacgag 19976150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 20455925 - 20455888
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  20455925 ttatgcattgtccataccaattgagctaagctcacgag 20455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 20565102 - 20565139
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  20565102 ttatgcattgtccctaccaactgagctaagctcacgag 20565139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 25598589 - 25598626
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  25598589 ttatgcattgtccataccaactgagctaagttcacgag 25598626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 29798544 - 29798581
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  29798544 ttatgcattgtccataccaactgagttaagctcacgag 29798581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32063615 - 32063652
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  32063615 ttatgcattatccataccaactgagctaagctcacgag 32063652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 33064020 - 33063983
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  33064020 ttatgcattgtccatatcaactgagctaagctcacgag 33063983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 34464436 - 34464473
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  34464436 ttatgcattgtccataccaactgagctaaactcacgag 34464473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 34977238 - 34977201
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  34977238 ttatgcattgtccataccaactgagttaagctcacgag 34977201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 35820328 - 35820365
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  35820328 ttatgcattgtccctaccaactgagctaagctcacgag 35820365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36171562 - 36171525
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  36171562 ttatgtattgtccctaccaactgagttaagctcacgag 36171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 36615066 - 36615103
Alignment:
Q  10 attgtccataccaactgagctaagctcacgagtaggac 47  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  36615066 attgtccataccaactgagttaagctcacgaggaggac 36615103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 40365433 - 40365470
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  40365433 ttatgcattgtacataccaactgagctaagctcacgag 40365470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 40896536 - 40896573
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  40896536 ttatgcattgtctataccaactgagctaagctcacgag 40896573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 41187484 - 41187521
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  41187484 ttatgcattgtccataccaactaagctaagctcacgag 41187521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 42714473 - 42714436
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  42714473 ttatgcattgtccataccaactgaactaagctcacgag 42714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 5842160 - 5842196
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  5842160 ttatgtattgtccatatcaacttagctaagctcacga 5842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 11953980 - 11953944
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  11953980 ttatgtattgtccctaccaactgagcttagctcacga 11953944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 15333151 - 15333123
Alignment:
Q  12 tgtccataccaactgagctaagctcacga 40  Q
    |||||||||||||||||||||||||||||    
T  15333151 tgtccataccaactgagctaagctcacga 15333123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 15447748 - 15447784
Alignment:
Q  5 tatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  15447748 tatgtattgtctataccaactgagctaaactcacgag 15447784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34685991 - 34686027
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  34685991 ttatgcattgtccaaaccaactgagctaagctcacga 34686027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34708412 - 34708448
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  34708412 ttatgcattgtccaaaccaactgagctaagctcacga 34708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 41204528 - 41204564
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  41204528 ttatgcattgtccataccaactaagctaagctcacga 41204564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 41763906 - 41763942
Alignment:
Q  5 tatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||| |||||||||||||||||||||||| |||||||    
T  41763906 tatgcattgtccataccaactgagctaagttcacgag 41763942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 43826469 - 43826501
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctc 36  Q
    ||||||||||||| |||||||||||||||||||    
T  43826469 ttatgtattgtccttaccaactgagctaagctc 43826501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 10297669 - 10297634
Alignment:
Q  10 attgtccataccaactgagctaagctcacgagtagg 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  10297669 attgtccataccaactgagctaagctcacgagtagg 10297634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 19163563 - 19163600
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  19163563 ttatgcattgtccataccaactgagctaagctcacgag 19163600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 2554239 - 2554273
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    |||||||||||||||| ||||||||||||||||||    
T  2554239 ttatgtattgtccatatcaactgagctaagctcac 2554273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 30427765 - 30427731
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  30427765 ttatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 2188574 - 2188537
Alignment:
Q  10 attgtccataccaactgagctaagctcacgagtaggac 47  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2188574 attgtccataccaactgagttaagctcacgaggaggac 2188537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2958459 - 2958422
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  2958459 ttatgcattgtccataccaactgaactaagctcacgag 2958422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 7380078 - 7380041
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  7380078 ttatgtattgtccataacaattgagctaagctcacgag 7380041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 8137969 - 8137932
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  8137969 ttatgcattgtccataccaactgagctaagcttacgag 8137932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 8717502 - 8717539
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  8717502 ttatgcattgtccataccaactgagctaaactcacgag 8717539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11709020 - 11708983
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  11709020 ttatgcattgtccctaccaactgagctaagctcacgag 11708983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13286165 - 13286128
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  13286165 ttatgcattgtctataccaactgagctaagctcacgag 13286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 13357468 - 13357505
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  13357468 ttatgcattgtccataccaactgagttaagctcacgag 13357505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 17704047 - 17704010
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  17704047 ttatgcattgtccttaccaactgagctaagctcacgag 17704010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23852945 - 23852908
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  23852945 ttatgcattgtccataccgactgagctaagctcacgag 23852908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27718921 - 27718958
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  27718921 ttatgcattgtccatatcaactgagctaagctcacgag 27718958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 29499805 - 29499768
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  29499805 ttatgcattgtccataccaattgagctaagctcacgag 29499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 33451376 - 33451413
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  33451376 ttatgcattatccataccaactgagctaagctcacgag 33451413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 35682719 - 35682756
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  35682719 ttatggattgtccgtaccaactgagctaagctcacgag 35682756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 37570780 - 37570817
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  37570780 ttatgtattgtccataccaaccgagctaagttcacgag 37570817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39433444 - 39433407
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  39433444 ttatgtattgttcatatcaactgagctaagctcacgag 39433407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39821918 - 39821881
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  39821918 ttatgcattgtccctaccaactgagctaagctcacgag 39821881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 43962051 - 43962088
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  43962051 ttatgtattgtccttaccaactgagctaagcccacgag 43962088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 44293609 - 44293572
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  44293609 ttatgcattgtctataccaactgagctaagctcacgag 44293572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 8639943 - 8639907
Alignment:
Q  5 tatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  8639943 tatgcattgtccatacaaactgagctaagctcacgag 8639907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 10982760 - 10982724
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    |||| |||||||||||||||||||| |||||||||||    
T  10982760 ttatatattgtccataccaactgagttaagctcacga 10982724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 13004199 - 13004163
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  13004199 ttatgcattgtccataccaactgagttaagctcacga 13004163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 35103140 - 35103104
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  35103140 ttatgcattgttcataccaactgagctaagctcacga 35103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 36781442 - 36781406
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  36781442 ttatgtattgtccttaccaactgagctaggctcacga 36781406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 37873011 - 37872975
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  37873011 ttatgcattgaccataccaactgagctaagctcacga 37872975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 20927673 - 20927639
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    |||||||||||||||||||||||||||||||||||    
T  20927673 ttatgtattgtccataccaactgagctaagctcac 20927639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10199053 - 10199016
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10199053 ttatgcattgtccataccaactgagctaagctcacgag 10199016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 28207166 - 28207129
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  28207166 ttatgcattgtccataccaactgagctaagctcacgag 28207129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32283613 - 32283576
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32283613 ttatgcattgtccataccaactgagctaagctcacgag 32283576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 37932364 - 37932327
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  37932364 ttatgcattgtccataccaactgagctaagctcacgag 37932327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 36818967 - 36818931
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    |||| ||||||||||||||||||||||||||||||||    
T  36818967 ttatatattgtccataccaactgagctaagctcacga 36818931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 6375557 - 6375522
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6375557 ttatgtattgtccttaccaactgagctaagctcacg 6375522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 20175753 - 20175722
Alignment:
Q  10 attgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||||    
T  20175753 attgtccataccaactgagctaagctcacgag 20175722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 26409287 - 26409252
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||| ||||||||||||||||||||||||||||||    
T  26409287 ttatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 10704358 - 10704392
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  10704358 ttatgcattgtccataccaactgagctaagctcac 10704392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 1488398 - 1488365
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  1488398 ttatgcattgtccataccaactgagctaagctca 1488365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 3445274 - 3445311
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  3445274 ttatgcattgtccttaccaactgagctaagctcacgag 3445311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4573086 - 4573123
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  4573086 ttatgcattgtccataccaactgaactaagctcacgag 4573123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5485220 - 5485183
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  5485220 ttatgcattgtccctaccaactgagctaagctcacgag 5485183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 6489041 - 6489004
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  6489041 ttatgcattgtccctaccaactgagctaagctcacgag 6489004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 6624810 - 6624773
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  6624810 ttatgcattgtccatgccaactgagctaagctcacgag 6624773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Original strand, 8902809 - 8902838
Alignment:
Q  10 attgtccataccaactgagctaagctcacg 39  Q
    ||||||||||||||||||||||||||||||    
T  8902809 attgtccataccaactgagctaagctcacg 8902838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11637599 - 11637636
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  11637599 ttatgcattgtccataccaactgagttaagctcacgag 11637636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13864378 - 13864341
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  13864378 ttatgtattgttcataccaactgagttaagctcacgag 13864341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13880230 - 13880193
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  13880230 ttatgtattgtccatatcaactgaactaagctcacgag 13880193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 15889445 - 15889408
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  15889445 ttatgcattgtccctaccaactgagctaagctcacgag 15889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16036861 - 16036824
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  16036861 ttatgtattgtccatgccaactgagctaagctctcgag 16036824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16133092 - 16133129
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  16133092 ttatgcattgtccttaccaactgagctaagctcacgag 16133129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 17046368 - 17046331
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  17046368 ttatgcattgtccataccaactgagttaagctcacgag 17046331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 17261825 - 17261788
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  17261825 ttatgtattgtccataccaaccgagctaaactcacgag 17261788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19248513 - 19248476
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  19248513 ttatgcattgtctataccaactgagctaagctcacgag 19248476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22522828 - 22522865
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  22522828 ttatgcattgtccataccaaccgagctaagctcacgag 22522865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 22619908 - 22619871
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  22619908 ttatgcattgttcataccaactgagctaagctcacgag 22619871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 24485733 - 24485696
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  24485733 ttatgcattgtccataccaactaagctaagctcacgag 24485696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 29178481 - 29178444
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  29178481 ttatgcattgtccataccaactgagttaagctcacgag 29178444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 31561371 - 31561408
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  31561371 ttatgcattgtccataccaactgagttaagctcacgag 31561408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32858704 - 32858667
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  32858704 ttatgcattgtccataccaacggagctaagctcacgag 32858667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 33133673 - 33133636
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  33133673 ttatgcattgtccctaccaactgagctaagctcacgag 33133636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 33369440 - 33369477
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  33369440 ttatgtattgttcataccaactgagttaagctcacgag 33369477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 34436885 - 34436848
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  34436885 ttatgcattgtccctaccaactgagctaagctcacgag 34436848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 36321521 - 36321558
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  36321521 ttatgcattgtccttaccaactgagctaagctcacgag 36321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 38534694 - 38534657
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  38534694 ttatgtattgtccataccaattgagttaagctcacgag 38534657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 39610368 - 39610405
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  39610368 ttatgcattgtccatatcaactgagctaagctcacgag 39610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 39800063 - 39800104
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagtagg 45  Q
    ||||| ||||||| |||||||||||||||||||||| |||||    
T  39800063 ttatgcattgtccctaccaactgagctaagctcacgggtagg 39800104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39980542 - 39980505
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  39980542 ttatgcattatccataccaactgagctaagctcacgag 39980505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 42505906 - 42505869
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  42505906 ttatgcattgtccataccaactgagctaagcttacgag 42505869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 10032301 - 10032337
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  10032301 ttatgcattgtccataccaactgagttaagctcacga 10032337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 17862013 - 17861969
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagtaggaca 48  Q
    ||||| ||||||| ||||||||||||||| |||||||| ||||||    
T  17862013 ttatgcattgtccctaccaactgagctaaactcacgaggaggaca 17861969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22555264 - 22555228
Alignment:
Q  5 tatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  22555264 tatgcattgtccataccaactgagttaagctcacgag 22555228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 41650966 - 41651002
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  41650966 ttatgcattgtccataccaactgagttaagctcacga 41651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 40032 - 39995
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  40032 ttatgcattgtccataccaactgagctaagctcacgag 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 45446 - 45409
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  45446 ttatgtattgtccaaaccaactgagttaagctcacgag 45409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5352363 - 5352326
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5352363 ttatgtattgtccttaccaactgagctaagctcacgag 5352326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5526759 - 5526722
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5526759 ttatgcattgtccataccaactgagctaagctcacgag 5526722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10244761 - 10244724
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10244761 ttatgcattgtccataccaactgagctaagctcacgag 10244724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19416548 - 19416511
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  19416548 ttatgcattgtccataccaactgagctaagctcacgag 19416511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 20243289 - 20243252
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  20243289 ttatgcattgtccataccaactgagctaagctcacgag 20243252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 38728242 - 38728205
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38728242 ttatgcattgtccataccaactgagctaagctcacgag 38728205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39801740 - 39801703
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  39801740 ttatgcattgtccataccaactgagctaagctcacgag 39801703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 40752866 - 40752903
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  40752866 ttatgtattgtccatactaactgagctaagctcacgag 40752903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 48980521 - 48980484
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  48980521 ttatgcattgtccataccaactgagctaagctcacgag 48980484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 31038550 - 31038586
Alignment:
Q  5 tatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31038550 tatgcattgtccataccaactgagctaagctcacgag 31038586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 35
Target Start/End: Complemental strand, 26471250 - 26471219
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagct 35  Q
    ||||||||||||||||||||||||||||||||    
T  26471250 ttatgtattgtccataccaactgagctaagct 26471219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 35
Target Start/End: Complemental strand, 26547690 - 26547659
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagct 35  Q
    ||||||||||||||||||||||||||||||||    
T  26547690 ttatgtattgtccataccaactgagctaagct 26547659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 42043093 - 42043127
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  42043093 ttatgcattgtccataccaactgagctaagctcac 42043127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 580953 - 580990
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  580953 ttatgcattgtccataccaaccgagctaagctcacgag 580990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1120058 - 1120095
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||  |||||||||||||||||||||||    
T  1120058 ttatgtattgtcctcaccaactgagctaagctcacgag 1120095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 3953475 - 3953438
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  3953475 ttatgcattgtccataccgactgagctaagctcacgag 3953438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4227555 - 4227592
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  4227555 ttatgcattgtccataccaactgagttaagctcacgag 4227592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 7705067 - 7705104
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  7705067 ttatgcattgtccatgccaactgagctaagctcacgag 7705104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 8683104 - 8683067
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  8683104 ttatgcattgtctataccaactgagctaagctcacgag 8683067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 8883587 - 8883550
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  8883587 ttatgcattgtccataccaactgagttaagctcacgag 8883550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11373706 - 11373669
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  11373706 ttatgcattgtccacaccaactgagctaagctcacgag 11373669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 13044169 - 13044210
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagtagg 45  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||    
T  13044169 ttatgcattgtccttaccaactgagctaagctcacgattagg 13044210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 18505684 - 18505721
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  18505684 ttatgcattgtccctaccaactgagctaagctcacgag 18505721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21993216 - 21993179
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  21993216 ttatgcattgtccataccaactgagttaagctcacgag 21993179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27462463 - 27462500
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  27462463 ttatgcattgtccataccaactgagctatgctcacgag 27462500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 35142176 - 35142213
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  35142176 ttatgcattgtccatatcaactgagctaagctcacgag 35142213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 38088044 - 38088081
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  38088044 ttatgttttgtccttaccaactgagctaagctcacgag 38088081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 38842021 - 38841988
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  38842021 ttatgcattgtccataccaactgagctaagctca 38841988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 41527594 - 41527557
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  41527594 ttatgcattgtccataccaactaagctaagctcacgag 41527557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44558801 - 44558838
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  44558801 ttatgcattgtccataccaactgagctaaactcacgag 44558838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 46207794 - 46207757
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  46207794 ttatgcattgttcataccaactgagctaagctcacgag 46207757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 47342711 - 47342674
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  47342711 ttatgcattgtccataccaactgagctaagttcacgag 47342674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 47589580 - 47589617
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  47589580 ttatgcattgttcataccaactgagctaagctcacgag 47589617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 21286384 - 21286352
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctc 36  Q
    |||||||||||||||||||| ||||||||||||    
T  21286384 ttatgtattgtccataccaattgagctaagctc 21286352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 46220977 - 46221013
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  46220977 ttatgcattgtccataccaactgagttaagctcacga 46221013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4494898 - 4494935
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  4494898 ttatgcattgtccataccaactgagctaagctcacgag 4494935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 5655334 - 5655371
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5655334 ttatgtattgtccctaccaactgagctaagctcacgag 5655371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 11982585 - 11982544
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagtagg 45  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  11982585 ttatgtattgtccataccatttgagctaagctcacgagtagg 11982544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 20744172 - 20744135
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  20744172 ttatgcattgtccataccaactgagctaagctcacgag 20744135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32053822 - 32053785
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32053822 ttatgcattgtccataccaactgagctaagctcacgag 32053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 26320590 - 26320626
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||||||||||||||||||    
T  26320590 ttatgcattgtccataccaactgagctaagctcacga 26320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 17382112 - 17382081
Alignment:
Q  10 attgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||||    
T  17382112 attgtccataccaactgagctaagctcacgag 17382081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 26400898 - 26400863
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  26400898 ttatgtattgtccataccaattgagctaagctcacg 26400863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 7989223 - 7989253
Alignment:
Q  10 attgtccataccaactgagctaagctcacga 40  Q
    |||||||||||||||||||||||||||||||    
T  7989223 attgtccataccaactgagctaagctcacga 7989253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 14296984 - 14297018
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    |||||||||||||||||||||| ||||||||||||    
T  14296984 ttatgtattgtccataccaactcagctaagctcac 14297018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2108759 - 2108722
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  2108759 ttatgcattgtccataccaactgagttaagctcacgag 2108722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5271427 - 5271390
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  5271427 ttatgtattgtccataccaactgagttaagttcacgag 5271390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 8810674 - 8810637
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  8810674 ttatgtattgtctttaccaactgagctaagctcacgag 8810637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 9558482 - 9558445
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  9558482 ttatgtattgttcataccaaccgagctaagctcacgag 9558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 9677269 - 9677232
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  9677269 ttatgcattgtccaaaccaactgagctaagctcacgag 9677232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10780134 - 10780171
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  10780134 ttatgcattgtccctaccaactgagctaagctcacgag 10780171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12333595 - 12333632
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  12333595 ttatgcattgtccatactaactgagctaagctcacgag 12333632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13376346 - 13376309
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  13376346 ttatgcattgtccataccaattgagctaagctcacgag 13376309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 21847228 - 21847195
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||||||||||| ||||||||||||||||||||    
T  21847228 ttatgtattgtccctaccaactgagctaagctca 21847195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 24269917 - 24269880
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  24269917 ttatgcattgtccatactaactgagctaagctcacgag 24269880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 29740516 - 29740479
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  29740516 ttatgcattgtccataccaattgagctaagctcacgag 29740479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 33938706 - 33938743
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  33938706 ttatgcattgttcataccaactgagctaagctcacgag 33938743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 34828340 - 34828303
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  34828340 ttatgcattgtccataccaactgagctaaactcacgag 34828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 16130799 - 16130763
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  16130799 ttatgcattgtccataccaactaagctaagctcacga 16130763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 20720808 - 20720844
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  20720808 ttatgcattgtccataacaactgagctaagctcacga 20720844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10498722 - 10498759
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10498722 ttatgcattgtccataccaactgagctaagctcacgag 10498759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 14827559 - 14827522
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  14827559 ttatgcattgtccataccaactgagctaagctcacgag 14827522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21506785 - 21506822
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21506785 ttatgcattgtccataccaactgagctaagctcacgag 21506822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 25340951 - 25340988
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  25340951 ttatgcattgtccataccaactgagctaagctcacgag 25340988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 27185511 - 27185474
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27185511 ttatgtattgtccctaccaactgagctaagctcacgag 27185474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39481175 - 39481138
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  39481175 ttatgcattgtccataccaactgagctaagctcacgag 39481138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 44579670 - 44579633
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  44579670 ttatgcattgtccataccaactgagctaagctcacgag 44579633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 47313399 - 47313436
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  47313399 ttatgcattgtccataccaactgagctaagctcacgag 47313436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 32836207 - 32836171
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||||||||||||||||||    
T  32836207 ttatgcattgtccataccaactgagctaagctcacga 32836171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 50037345 - 50037309
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||||||||||||||||||    
T  50037345 ttatgcattgtccataccaactgagctaagctcacga 50037309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 25874164 - 25874125
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagta 43  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  25874164 ttatgcattgtccataccaactgagttaagctcacgagta 25874125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 32629114 - 32629079
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32629114 ttatgcattgtccataccaactgagctaagctcacg 32629079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 23148005 - 23148039
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||||||||||| |||||||||||||||||||||    
T  23148005 ttatgtattgtccttaccaactgagctaagctcac 23148039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 53996333 - 53996299
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  53996333 ttatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1149096 - 1149133
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  1149096 ttatgcattgtccttaccaactgagctaagctcacgag 1149133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 2186454 - 2186491
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  2186454 ttatgtattgtccataccaactgagttaagttcacgag 2186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 3100255 - 3100218
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  3100255 ttatgcattgtccacaccaactgagctaagctcacgag 3100218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5117242 - 5117205
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| || |||||||||||||||||||||    
T  5117242 ttatgtattgtccttatcaactgagctaagctcacgag 5117205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 7557561 - 7557598
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  7557561 ttatgcattgtccataccaactgagttaagctcacgag 7557598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 8831372 - 8831409
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  8831372 ttatgtattgtacataccaactgagctaagcttacgag 8831409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16980381 - 16980418
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  16980381 ttatgcattgtccttaccaactgagctaagctcacgag 16980418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 18870752 - 18870789
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  18870752 ttatgcattgtccctaccaactgagctaagctcacgag 18870789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 20370308 - 20370345
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  20370308 ttatgcattgtccatatcaactgagctaagctcacgag 20370345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21331444 - 21331481
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  21331444 ttatgcattgtccataacaactgagctaagctcacgag 21331481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21914862 - 21914899
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  21914862 ttatgtattgtcattaccaactgagctaagctcacgag 21914899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 29631220 - 29631187
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  29631220 ttatgcattgtccataccaactgagctaagctca 29631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32843289 - 32843326
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  32843289 ttatgcattgtccaaaccaactgagctaagctcacgag 32843326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 33404262 - 33404229
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    |||||||||||||||| |||||||||||||||||    
T  33404262 ttatgtattgtccatatcaactgagctaagctca 33404229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 35863840 - 35863877
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  35863840 ttatgtattgtccttaccaactgagctaagcttacgag 35863877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 43345034 - 43345071
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  43345034 ttatgtattgttcataccaactgagctaaactcacgag 43345071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 43490444 - 43490481
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  43490444 ttatgcattgttcataccaactgagctaagctcacgag 43490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 47244414 - 47244447
Alignment:
Q  10 attgtccataccaactgagctaagctcacgagta 43  Q
    |||||| |||||||||||||||||||||||||||    
T  47244414 attgtctataccaactgagctaagctcacgagta 47244447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 7974539 - 7974575
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  7974539 ttatgcattatccataccaactgagctaagctcacga 7974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 20413779 - 20413815
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  20413779 ttatgtattatccatatcaactgagctaagctcacga 20413815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 23086073 - 23086041
Alignment:
Q  9 tattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||| |||||||||||||||||||||||    
T  23086073 tattgtccaaaccaactgagctaagctcacgag 23086041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 24428500 - 24428532
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctc 36  Q
    ||||| |||||||||||||||||||||||||||    
T  24428500 ttatgcattgtccataccaactgagctaagctc 24428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 29687111 - 29687079
Alignment:
Q  9 tattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| |||||||||||||||||||||    
T  29687111 tattgtccatatcaactgagctaagctcacgag 29687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48796242 - 48796282
Alignment:
Q  1 atcttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||||| |||||||| || ||||||||||||||||||||    
T  48796242 atcttatgcattgtccaaactaactgagctaagctcacgag 48796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2613756 - 2613719
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  2613756 ttatgcattgtccataccaactgagctaagctcacgag 2613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24752675 - 24752712
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  24752675 ttatgcattgtccataccaactgagctaagctcacgag 24752712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 30895368 - 30895331
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  30895368 ttatgtattgtccataccaactgagttaagctcacgag 30895331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 40268244 - 40268207
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  40268244 ttatgtactgtccataccaactgagctaagctcacgag 40268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 42045399 - 42045436
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  42045399 ttatgcattgtccataccaactgagctaagctcacgag 42045436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 43611458 - 43611422
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||||||||||||||||||||||||||| |||||||    
T  43611458 ttatgtattgtccataccaactgagctaaactcacga 43611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 14520978 - 14520943
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14520978 ttatgcattgtccataccaactgagctaagctcacg 14520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 41
Target Start/End: Original strand, 17280117 - 17280148
Alignment:
Q  10 attgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||||    
T  17280117 attgtccataccaactgagctaagctcacgag 17280148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 19620610 - 19620575
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||||||||||| ||||||||||||||||||||||    
T  19620610 ttatgtattgtccttaccaactgagctaagctcacg 19620575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 41677617 - 41677652
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41677617 ttatgtattgtccttaccaactgagctaagctcacg 41677652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 42888609 - 42888574
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||| ||||||||||||||||||||||||||||||    
T  42888609 ttatgcattgtccataccaactgagctaagctcacg 42888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 45140033 - 45140068
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||| ||||||||||||||||||||||||||||||    
T  45140033 ttatgcattgtccataccaactgagctaagctcacg 45140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 2636781 - 2636819
Alignment:
Q  3 cttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  2636781 cttatgcattgtccataccaactgagttaagctcacgag 2636819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 8253773 - 8253739
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  8253773 ttatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 25086517 - 25086483
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  25086517 ttatgcattgtccataccaactgagctaagctcac 25086483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 34733434 - 34733396
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgagt 42  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  34733434 ttatgcattgtccttaccaactgagctaagctcacgagt 34733396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 48100756 - 48100722
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcac 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  48100756 ttatgcattgtccataccaactgagctaagctcac 48100722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 1794630 - 1794593
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  1794630 ttatgcattgtccatactaactgagctaagctcacgag 1794593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 3509968 - 3510005
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  3509968 ttatgcattgtccataccaactgagctaagttcacgag 3510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 6567744 - 6567707
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  6567744 ttatgcattgtccataccaattgagctaagctcacgag 6567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 8269395 - 8269432
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  8269395 ttatgtattgtccttaccaactgagctaagttcacgag 8269432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13590144 - 13590107
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  13590144 ttatgcattgtccaaaccaactgagctaagctcacgag 13590107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 15602204 - 15602241
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  15602204 ttatgcattgtccataccaactgagctatgctcacgag 15602241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16826388 - 16826351
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  16826388 ttatgcattgtccatagcaactgagctaagctcacgag 16826351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17139544 - 17139581
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  17139544 ttatgcattgtccctaccaactgagctaagctcacgag 17139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 17188695 - 17188728
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  17188695 ttatgcattgtccataccaactgagctaagctca 17188728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17201233 - 17201270
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  17201233 ttatgtattgtccctaccaactgagctaagttcacgag 17201270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21400050 - 21400087
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  21400050 ttatgcattgtccctaccaactgagctaagctcacgag 21400087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24162789 - 24162826
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  24162789 ttatgcattgtccataccaacagagctaagctcacgag 24162826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 24695593 - 24695556
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  24695593 ttatgtattgttcataccaactgagctaaactcacgag 24695556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 25533007 - 25532970
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  25533007 ttatgcattgtccataccaactgaactaagctcacgag 25532970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 26803478 - 26803515
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  26803478 ttatgcattgtccataccaactgagctaagttcacgag 26803515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27172749 - 27172786
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  27172749 ttatgttttgtccataccaactgagttaagctcacgag 27172786  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 29451009 - 29451046
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  29451009 ttatgcattgtccataccaactgagttaagctcacgag 29451046  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 34142391 - 34142424
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||||||||| ||||||||||||||||||||||    
T  34142391 ttatgtattgtgcataccaactgagctaagctca 34142424  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39452494 - 39452457
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  39452494 ttatgcattgttcataccaactgagctaagctcacgag 39452457  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 40227863 - 40227830
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  40227863 ttatgcattgtccataccaactgagctaagctca 40227830  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 43426214 - 43426181
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctca 37  Q
    ||||||||||||| ||||||||||||||||||||    
T  43426214 ttatgtattgtccctaccaactgagctaagctca 43426181  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 48681960 - 48681997
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  48681960 ttatgcattgttcataccaactgagctaagctcacgag 48681997  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 49183207 - 49183170
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  49183207 ttatgtattgtccttaccaactgagctaaactcacgag 49183170  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 51831300 - 51831271
Alignment:
Q  12 tgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||    
T  51831300 tgtccataccaactgagctaagctcacgag 51831271  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 52441538 - 52441575
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  52441538 ttatgcattgtctataccaactgagctaagctcacgag 52441575  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 10356210 - 10356246
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  10356210 ttatgcattgtccataccaactgagttaagctcacga 10356246  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 12364141 - 12364169
Alignment:
Q  13 gtccataccaactgagctaagctcacgag 41  Q
    |||||||||||||||||||||||||||||    
T  12364141 gtccataccaactgagctaagctcacgag 12364169  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 26498095 - 26498059
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  26498095 ttatgcattgtccgtaccaactgagctaagctcacga 26498059  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 39252284 - 39252320
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  39252284 ttatgtattgtcgatatcaactgagctaagctcacga 39252320  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 40938514 - 40938478
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  40938514 ttatgtattgtccataccaattgagctaaggtcacga 40938478  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 44718085 - 44718117
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctc 36  Q
    |||| ||||||||||||||||||||||||||||    
T  44718085 ttatctattgtccataccaactgagctaagctc 44718117  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 47692933 - 47692969
Alignment:
Q  5 tatgtattgtccataccaactgagctaagctcacgag 41  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  47692933 tatgcattgtccataccaactgagttaagctcacgag 47692969  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 47268 - 47304
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||||||||||||||||||||||||    
T  47268 ttatgcattgtccataccaactgagctaagctcacga 47304  T

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Target: scaffold0735 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 1562 - 1527
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacg 39  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1562 ttatgcattgtccataccaactgagctaagctcacg 1527  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 56812 - 56781
Alignment:
Q  10 attgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||||||||||||||||||||||    
T  56812 attgtccataccaactgagctaagctcacgag 56781  T

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Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 58887 - 58850
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  58887 ttatgcattatccataccaactgagctaagctcacgag 58850  T

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Target: scaffold0896 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 3175 - 3138
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  3175 ttatgtattgtctttaccaactgagctaagctcacgag 3138  T

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Target: scaffold0743 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1446 - 1483
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  1446 ttatgcattgtccataccaactgtgctaagctcacgag 1483  T

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Target: scaffold0458 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11179 - 11216
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  11179 ttatgcattgtccataccaactgatctaagctcacgag 11216  T

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Target: scaffold0197 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21782 - 21819
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  21782 ttatgcattgtctataccaactgagctaagctcacgag 21819  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 28140 - 28177
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  28140 ttatgcattgtccataccaactgagctaaactcacgag 28177  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 17766 - 17729
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  17766 ttatgcattgtccataccaactgagctaaactcacgag 17729  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 208976 - 208939
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacgag 41  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  208976 ttatgcattgtccaaaccaactgagctaagctcacgag 208939  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 244513 - 244477
Alignment:
Q  4 ttatgtattgtccataccaactgagctaagctcacga 40  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  244513 ttatgcattgtccatatcaactgagctaagctcacga 244477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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