View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0769_high_25 (Length: 249)

Name: NF0769_high_25
Description: NF0769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0769_high_25
NF0769_high_25
[»] scaffold2111 (1 HSPs)
scaffold2111 (1-242)||(133-374)
[»] chr7 (42 HSPs)
chr7 (1-242)||(19615153-19615394)
chr7 (22-241)||(15342930-15343149)
chr7 (16-241)||(14140172-14140397)
chr7 (13-221)||(15100154-15100362)
chr7 (22-233)||(16948011-16948222)
chr7 (22-227)||(13966213-13966418)
chr7 (22-227)||(26116135-26116340)
chr7 (13-221)||(16069848-16070056)
chr7 (22-221)||(13675951-13676149)
chr7 (16-239)||(11385962-11386185)
chr7 (16-227)||(14283919-14284130)
chr7 (22-241)||(18051484-18051703)
chr7 (22-227)||(21754911-21755116)
chr7 (22-227)||(26092343-26092548)
chr7 (22-227)||(49154800-49155005)
chr7 (13-234)||(14261783-14262004)
chr7 (22-176)||(8710103-8710257)
chr7 (22-176)||(14334894-14335048)
chr7 (22-176)||(44788969-44789123)
chr7 (22-176)||(10873188-10873342)
chr7 (22-176)||(13688539-13688693)
chr7 (22-176)||(15158675-15158829)
chr7 (22-176)||(18587789-18587943)
chr7 (13-150)||(11234857-11234994)
chr7 (116-233)||(12459221-12459338)
chr7 (22-233)||(13023856-13024055)
chr7 (22-188)||(11300797-11300963)
chr7 (12-137)||(11550759-11550884)
chr7 (12-137)||(14957042-14957167)
chr7 (22-137)||(18180243-18180358)
chr7 (22-137)||(9590866-9590981)
chr7 (82-221)||(12799052-12799191)
chr7 (13-137)||(16727040-16727164)
chr7 (13-137)||(17704112-17704236)
chr7 (22-197)||(12204375-12204550)
chr7 (110-176)||(8200634-8200700)
chr7 (82-176)||(19149570-19149664)
chr7 (82-176)||(20748969-20749063)
chr7 (12-137)||(12689990-12690115)
chr7 (19-137)||(11770059-11770177)
chr7 (13-59)||(14150170-14150216)
chr7 (13-62)||(12799253-12799302)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-242)||(115079-115320)
scaffold0029 (38-227)||(94455-94644)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-242)||(3716-3957)
[»] chr3 (55 HSPs)
chr3 (1-242)||(13969891-13970132)
chr3 (1-242)||(14088790-14089031)
chr3 (21-227)||(13318288-13318494)
chr3 (13-221)||(11949700-11949908)
chr3 (22-221)||(31941041-31941240)
chr3 (22-221)||(18132138-18132337)
chr3 (22-221)||(31692977-31693176)
chr3 (19-234)||(24189439-24189654)
chr3 (22-221)||(12358319-12358518)
chr3 (19-241)||(17188509-17188731)
chr3 (22-241)||(16832300-16832519)
chr3 (13-197)||(17493775-17493959)
chr3 (38-227)||(10417831-10418020)
chr3 (13-234)||(14291311-14291532)
chr3 (21-221)||(12180481-12180681)
chr3 (22-241)||(13944162-13944381)
chr3 (22-241)||(44779385-44779604)
chr3 (22-227)||(28756457-28756662)
chr3 (19-197)||(12272473-12272651)
chr3 (82-224)||(16327498-16327640)
chr3 (22-227)||(12510269-12510474)
chr3 (22-227)||(47126082-47126287)
chr3 (22-227)||(10408106-10408311)
chr3 (22-241)||(8745162-8745381)
chr3 (22-176)||(13254818-13254972)
chr3 (22-176)||(16637901-16638055)
chr3 (22-176)||(26791261-26791415)
chr3 (22-176)||(43164803-43164957)
chr3 (12-176)||(15400365-15400529)
chr3 (13-176)||(15587240-15587403)
chr3 (22-176)||(12888837-12888991)
chr3 (22-176)||(15346093-15346247)
chr3 (22-176)||(20059902-20060056)
chr3 (22-176)||(48427575-48427729)
chr3 (22-239)||(16378708-16378920)
chr3 (13-197)||(16826097-16826281)
chr3 (13-176)||(5422778-5422941)
chr3 (13-176)||(15713904-15714067)
chr3 (22-176)||(10007728-10007882)
chr3 (22-176)||(10908338-10908492)
chr3 (19-197)||(15229738-15229916)
chr3 (19-197)||(15235606-15235784)
chr3 (13-137)||(3688062-3688186)
chr3 (13-137)||(14874455-14874579)
chr3 (12-176)||(15358201-15358365)
chr3 (116-233)||(11958961-11959078)
chr3 (13-137)||(16694283-16694407)
chr3 (23-197)||(14575125-14575299)
chr3 (22-176)||(16754549-16754703)
chr3 (22-176)||(53382866-53383020)
chr3 (22-137)||(6602864-6602979)
chr3 (12-137)||(24185308-24185433)
chr3 (22-134)||(14579298-14579410)
chr3 (13-137)||(16804834-16804958)
chr3 (82-130)||(11888248-11888296)
[»] chr6 (31 HSPs)
chr6 (1-242)||(34643274-34643515)
chr6 (1-221)||(8761463-8761681)
chr6 (1-215)||(24516129-24516343)
chr6 (22-221)||(19437375-19437574)
chr6 (13-221)||(19455387-19455595)
chr6 (13-230)||(14377616-14377833)
chr6 (16-241)||(21567680-21567905)
chr6 (16-241)||(18797057-18797282)
chr6 (38-227)||(15461725-15461914)
chr6 (22-176)||(24293536-24293690)
chr6 (13-233)||(10466545-10466766)
chr6 (22-176)||(29590193-29590347)
chr6 (13-176)||(2872557-2872720)
chr6 (22-176)||(16574263-16574417)
chr6 (22-176)||(16620963-16621117)
chr6 (13-241)||(21473964-21474192)
chr6 (22-176)||(27189809-27189963)
chr6 (22-176)||(27259277-27259431)
chr6 (12-137)||(22828148-22828273)
chr6 (12-176)||(25114915-25115079)
chr6 (116-227)||(24366867-24366978)
chr6 (22-176)||(28312003-28312157)
chr6 (19-144)||(25770214-25770339)
chr6 (13-137)||(19867051-19867175)
chr6 (22-131)||(16961281-16961390)
chr6 (13-137)||(27563626-27563750)
chr6 (22-137)||(28260990-28261105)
chr6 (22-137)||(28284811-28284926)
chr6 (22-137)||(28339739-28339854)
chr6 (22-137)||(21755305-21755420)
chr6 (19-221)||(23085480-23085682)
[»] chr5 (36 HSPs)
chr5 (1-242)||(21676559-21676800)
chr5 (22-233)||(23078639-23078850)
chr5 (52-224)||(20823906-20824078)
chr5 (52-227)||(28892682-28892857)
chr5 (22-227)||(20344705-20344910)
chr5 (13-197)||(592-776)
chr5 (13-221)||(23563914-23564122)
chr5 (22-227)||(22505102-22505307)
chr5 (22-227)||(24796137-24796342)
chr5 (22-227)||(25850498-25850703)
chr5 (52-215)||(28921520-28921683)
chr5 (22-227)||(14884731-14884936)
chr5 (22-176)||(27520847-27521001)
chr5 (22-176)||(16358943-16359097)
chr5 (1-215)||(22464353-22464566)
chr5 (22-176)||(34568935-34569089)
chr5 (22-176)||(41773283-41773437)
chr5 (22-227)||(17267074-17267279)
chr5 (67-227)||(20778381-20778541)
chr5 (13-176)||(22330678-22330841)
chr5 (13-176)||(29473864-29474027)
chr5 (13-176)||(40711212-40711375)
chr5 (22-176)||(19772401-19772555)
chr5 (22-176)||(27666281-27666435)
chr5 (22-176)||(37289287-37289441)
chr5 (12-176)||(22350350-22350514)
chr5 (22-176)||(27683191-27683345)
chr5 (13-137)||(22137100-22137224)
chr5 (22-189)||(37541159-37541326)
chr5 (22-176)||(14997530-14997684)
chr5 (13-176)||(27612786-27612951)
chr5 (13-146)||(22233741-22233874)
chr5 (13-137)||(18781546-18781670)
chr5 (13-137)||(20803029-20803153)
chr5 (19-209)||(21561783-21561973)
chr5 (22-229)||(21983915-21984122)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-242)||(21368-21609)
[»] scaffold0028 (4 HSPs)
scaffold0028 (8-214)||(48088-48294)
scaffold0028 (22-176)||(53265-53419)
scaffold0028 (12-150)||(17466-17603)
scaffold0028 (12-59)||(11004-11051)
[»] scaffold0420 (2 HSPs)
scaffold0420 (16-230)||(8146-8360)
scaffold0420 (16-230)||(1177-1391)
[»] scaffold0046 (2 HSPs)
scaffold0046 (16-230)||(79389-79603)
scaffold0046 (13-146)||(60268-60401)
[»] chr4 (31 HSPs)
chr4 (7-241)||(16154351-16154585)
chr4 (7-241)||(16150205-16150439)
chr4 (22-234)||(1646828-1647040)
chr4 (22-227)||(11204790-11204995)
chr4 (1-225)||(27902873-27903097)
chr4 (13-221)||(15356684-15356892)
chr4 (22-229)||(51604348-51604555)
chr4 (22-227)||(3262352-3262557)
chr4 (22-227)||(29451095-29451300)
chr4 (38-221)||(44659430-44659613)
chr4 (22-227)||(20892540-20892745)
chr4 (13-176)||(16234341-16234504)
chr4 (22-176)||(12479109-12479263)
chr4 (13-176)||(14301328-14301491)
chr4 (13-176)||(19634636-19634799)
chr4 (22-176)||(8050972-8051126)
chr4 (22-176)||(8388921-8389075)
chr4 (13-215)||(15258427-15258629)
chr4 (22-176)||(17092498-17092652)
chr4 (22-176)||(19776142-19776296)
chr4 (22-176)||(27713845-27713999)
chr4 (22-176)||(23958256-23958410)
chr4 (13-146)||(15072859-15072992)
chr4 (13-176)||(40475540-40475703)
chr4 (12-137)||(14683066-14683191)
chr4 (13-137)||(16251238-16251362)
chr4 (13-137)||(16352918-16353042)
chr4 (13-137)||(15145281-15145405)
chr4 (22-137)||(18224834-18224949)
chr4 (13-102)||(15001048-15001137)
chr4 (97-197)||(14993956-14994056)
[»] scaffold0114 (2 HSPs)
scaffold0114 (16-230)||(39590-39804)
scaffold0114 (16-89)||(22408-22481)
[»] chr1 (29 HSPs)
chr1 (1-221)||(20833536-20833756)
chr1 (22-233)||(24097239-24097450)
chr1 (7-215)||(19856814-19857022)
chr1 (1-227)||(20854390-20854616)
chr1 (22-215)||(21953433-21953626)
chr1 (22-227)||(31537627-31537832)
chr1 (38-227)||(20296952-20297141)
chr1 (13-179)||(22016423-22016589)
chr1 (22-227)||(38910456-38910661)
chr1 (13-234)||(41311072-41311293)
chr1 (22-227)||(48425428-48425633)
chr1 (22-227)||(52988296-52988501)
chr1 (22-227)||(37679604-37679809)
chr1 (22-221)||(21739672-21739871)
chr1 (22-176)||(21832826-21832980)
chr1 (13-197)||(21743212-21743396)
chr1 (22-176)||(33388710-33388864)
chr1 (13-137)||(16348315-16348439)
chr1 (13-137)||(21839465-21839589)
chr1 (22-173)||(51331176-51331327)
chr1 (22-176)||(41351349-41351503)
chr1 (22-137)||(19108892-19109007)
chr1 (23-137)||(17042735-17042849)
chr1 (163-227)||(12200214-12200278)
chr1 (22-133)||(22503013-22503124)
chr1 (13-137)||(21233451-21233575)
chr1 (22-137)||(21751461-21751576)
chr1 (22-137)||(429836-429951)
chr1 (22-137)||(20140607-20140722)
[»] scaffold0348 (2 HSPs)
scaffold0348 (16-233)||(18038-18255)
scaffold0348 (16-227)||(5410-5621)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-230)||(9019-9248)
scaffold0235 (1-230)||(19233-19462)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-242)||(31223-31464)
scaffold0076 (116-230)||(53981-54095)
[»] chr8 (27 HSPs)
chr8 (22-230)||(22028278-22028486)
chr8 (22-227)||(16269225-16269430)
chr8 (13-197)||(21323310-21323494)
chr8 (22-227)||(28983486-28983691)
chr8 (22-227)||(28988705-28988910)
chr8 (22-239)||(31568832-31569049)
chr8 (22-233)||(22053437-22053649)
chr8 (112-232)||(31414528-31414648)
chr8 (13-199)||(19984746-19984932)
chr8 (13-234)||(21927994-21928215)
chr8 (22-227)||(27357111-27357316)
chr8 (22-176)||(19114975-19115129)
chr8 (22-176)||(20016315-20016469)
chr8 (22-176)||(17672074-17672229)
chr8 (13-176)||(22118227-22118390)
chr8 (22-137)||(18859152-18859267)
chr8 (25-176)||(22127011-22127162)
chr8 (22-176)||(19482124-19482278)
chr8 (13-137)||(15535949-15536073)
chr8 (13-137)||(30311235-30311359)
chr8 (13-137)||(19980533-19980657)
chr8 (13-137)||(32602711-32602835)
chr8 (25-137)||(21164629-21164741)
chr8 (13-137)||(22042393-22042517)
chr8 (19-179)||(29301475-29301635)
chr8 (22-137)||(19864184-19864299)
chr8 (13-58)||(22030669-22030714)
[»] scaffold0005 (1 HSPs)
scaffold0005 (22-241)||(262764-262983)
[»] scaffold0067 (4 HSPs)
scaffold0067 (19-241)||(49727-49949)
scaffold0067 (19-241)||(58761-58983)
scaffold0067 (19-241)||(65149-65371)
scaffold0067 (13-221)||(29153-29361)
[»] scaffold0243 (1 HSPs)
scaffold0243 (13-221)||(10339-10547)
[»] scaffold0010 (2 HSPs)
scaffold0010 (23-221)||(44994-45192)
scaffold0010 (22-227)||(39894-40099)
[»] scaffold0072 (1 HSPs)
scaffold0072 (22-221)||(53585-53784)
[»] scaffold0034 (2 HSPs)
scaffold0034 (22-221)||(2520-2719)
scaffold0034 (1-225)||(69889-70113)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-197)||(151088-151280)
[»] scaffold1530 (1 HSPs)
scaffold1530 (13-221)||(112-320)
[»] scaffold0404 (1 HSPs)
scaffold0404 (13-241)||(7273-7501)
[»] scaffold0222 (2 HSPs)
scaffold0222 (13-221)||(9592-9800)
scaffold0222 (22-230)||(1045-1255)
[»] scaffold0708 (1 HSPs)
scaffold0708 (22-233)||(5700-5911)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-233)||(251160-251371)
[»] scaffold0124 (1 HSPs)
scaffold0124 (7-221)||(14731-14945)
[»] scaffold0156 (1 HSPs)
scaffold0156 (7-197)||(36462-36652)
[»] chr2 (31 HSPs)
chr2 (13-230)||(19717112-19717329)
chr2 (22-215)||(23278916-23279109)
chr2 (22-241)||(27789880-27790099)
chr2 (22-241)||(12576493-12576712)
chr2 (16-241)||(23098102-23098327)
chr2 (13-197)||(25256049-25256233)
chr2 (23-176)||(24874899-24875052)
chr2 (22-176)||(9337722-9337876)
chr2 (22-176)||(9486356-9486510)
chr2 (22-176)||(16983380-16983534)
chr2 (22-176)||(17001140-17001294)
chr2 (22-176)||(24264510-24264664)
chr2 (22-176)||(27220156-27220310)
chr2 (22-176)||(44383719-44383873)
chr2 (13-176)||(27373400-27373563)
chr2 (22-176)||(24712174-24712328)
chr2 (22-176)||(41606534-41606688)
chr2 (22-137)||(10870990-10871105)
chr2 (12-176)||(21143190-21143354)
chr2 (22-189)||(1065891-1066058)
chr2 (22-189)||(31832798-31832965)
chr2 (13-137)||(21323454-21323578)
chr2 (83-176)||(22323491-22323584)
chr2 (13-137)||(23204445-23204569)
chr2 (13-137)||(24657846-24657969)
chr2 (22-137)||(24705670-24705785)
chr2 (22-119)||(16927500-16927597)
chr2 (22-137)||(23105916-23106031)
chr2 (22-120)||(16924117-16924215)
chr2 (22-62)||(19650313-19650353)
chr2 (22-137)||(24677629-24677742)
[»] scaffold1477 (1 HSPs)
scaffold1477 (13-197)||(757-941)
[»] scaffold0058 (1 HSPs)
scaffold0058 (22-230)||(21660-21868)
[»] scaffold0035 (1 HSPs)
scaffold0035 (7-197)||(5274-5464)
[»] scaffold1373 (1 HSPs)
scaffold1373 (40-233)||(389-582)
[»] scaffold0664 (1 HSPs)
scaffold0664 (101-221)||(6655-6775)
[»] scaffold0004 (1 HSPs)
scaffold0004 (38-221)||(325261-325444)
[»] scaffold0074 (1 HSPs)
scaffold0074 (13-230)||(14652-14869)
[»] scaffold1288 (1 HSPs)
scaffold1288 (13-221)||(422-630)
[»] scaffold0118 (1 HSPs)
scaffold0118 (24-227)||(1-204)
[»] scaffold0751 (1 HSPs)
scaffold0751 (19-221)||(4716-4918)
[»] scaffold0304 (1 HSPs)
scaffold0304 (13-234)||(1039-1260)
[»] scaffold0206 (1 HSPs)
scaffold0206 (22-227)||(25650-25855)
[»] scaffold0104 (2 HSPs)
scaffold0104 (22-233)||(24754-24965)
scaffold0104 (13-127)||(44079-44192)
[»] scaffold0239 (1 HSPs)
scaffold0239 (16-241)||(10333-10558)
[»] scaffold0165 (1 HSPs)
scaffold0165 (13-234)||(11489-11710)
[»] scaffold0088 (1 HSPs)
scaffold0088 (22-227)||(29472-29677)
[»] scaffold0077 (1 HSPs)
scaffold0077 (13-194)||(19228-19409)
[»] scaffold0020 (2 HSPs)
scaffold0020 (13-229)||(175517-175733)
scaffold0020 (113-220)||(99151-99258)
[»] scaffold0706 (1 HSPs)
scaffold0706 (101-220)||(5777-5896)
[»] scaffold0261 (2 HSPs)
scaffold0261 (21-224)||(21109-21312)
scaffold0261 (22-224)||(12929-13131)
[»] scaffold0443 (1 HSPs)
scaffold0443 (22-227)||(11347-11552)
[»] scaffold0309 (1 HSPs)
scaffold0309 (13-197)||(12325-12509)
[»] scaffold0054 (1 HSPs)
scaffold0054 (13-221)||(64086-64294)
[»] scaffold0053 (1 HSPs)
scaffold0053 (131-230)||(65856-65955)
[»] scaffold0001 (2 HSPs)
scaffold0001 (22-216)||(514925-515119)
scaffold0001 (13-197)||(452804-452988)
[»] scaffold0476 (1 HSPs)
scaffold0476 (16-241)||(1092-1317)
[»] scaffold0106 (1 HSPs)
scaffold0106 (22-227)||(33875-34080)
[»] scaffold0102 (1 HSPs)
scaffold0102 (13-234)||(42227-42448)
[»] scaffold0108 (1 HSPs)
scaffold0108 (13-229)||(49634-49850)
[»] scaffold0109 (2 HSPs)
scaffold0109 (10-176)||(40681-40847)
scaffold0109 (13-137)||(13775-13899)
[»] scaffold0865 (1 HSPs)
scaffold0865 (13-188)||(1872-2047)
[»] scaffold0190 (1 HSPs)
scaffold0190 (22-233)||(30874-31085)
[»] scaffold0133 (1 HSPs)
scaffold0133 (13-188)||(28885-29060)
[»] scaffold0031 (2 HSPs)
scaffold0031 (82-221)||(110208-110347)
scaffold0031 (13-137)||(52576-52700)
[»] scaffold0523 (1 HSPs)
scaffold0523 (19-189)||(2406-2576)
[»] scaffold0192 (1 HSPs)
scaffold0192 (20-234)||(29063-29277)
[»] scaffold0055 (1 HSPs)
scaffold0055 (22-176)||(21785-21939)
[»] scaffold0585 (1 HSPs)
scaffold0585 (13-229)||(4648-4864)
[»] scaffold0454 (1 HSPs)
scaffold0454 (13-137)||(9469-9593)
[»] scaffold0431 (1 HSPs)
scaffold0431 (12-176)||(9896-10060)
[»] scaffold0266 (1 HSPs)
scaffold0266 (19-131)||(16649-16761)
[»] scaffold0079 (3 HSPs)
scaffold0079 (22-221)||(3256-3455)
scaffold0079 (13-137)||(28607-28731)
scaffold0079 (13-137)||(36027-36151)
[»] scaffold0068 (1 HSPs)
scaffold0068 (82-227)||(67669-67814)
[»] scaffold0081 (2 HSPs)
scaffold0081 (13-137)||(21133-21257)
scaffold0081 (13-137)||(36557-36681)
[»] scaffold0042 (2 HSPs)
scaffold0042 (13-137)||(37471-37595)
scaffold0042 (19-131)||(25887-25999)
[»] scaffold0080 (4 HSPs)
scaffold0080 (22-137)||(13544-13659)
scaffold0080 (22-137)||(10889-11004)
scaffold0080 (13-137)||(31413-31537)
scaffold0080 (13-137)||(36879-37003)
[»] scaffold0044 (2 HSPs)
scaffold0044 (13-176)||(2953-3116)
scaffold0044 (13-137)||(16689-16813)
[»] scaffold0017 (1 HSPs)
scaffold0017 (22-137)||(17717-17832)
[»] scaffold0560 (1 HSPs)
scaffold0560 (22-176)||(8353-8507)
[»] scaffold0149 (3 HSPs)
scaffold0149 (13-127)||(5012-5126)
scaffold0149 (13-127)||(9443-9557)
scaffold0149 (13-137)||(358-482)
[»] scaffold0146 (1 HSPs)
scaffold0146 (22-215)||(5647-5840)
[»] scaffold0049 (1 HSPs)
scaffold0049 (13-176)||(49489-49652)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-146)||(51347-51474)
[»] scaffold0393 (1 HSPs)
scaffold0393 (12-137)||(15645-15770)
[»] scaffold0259 (1 HSPs)
scaffold0259 (12-137)||(7786-7911)
[»] scaffold0550 (1 HSPs)
scaffold0550 (13-137)||(10809-10933)
[»] scaffold0501 (1 HSPs)
scaffold0501 (13-137)||(12192-12316)
[»] scaffold1985 (1 HSPs)
scaffold1985 (22-137)||(223-335)
[»] scaffold0993 (1 HSPs)
scaffold0993 (22-139)||(420-537)
[»] scaffold0126 (1 HSPs)
scaffold0126 (13-106)||(43447-43540)
[»] scaffold1459 (1 HSPs)
scaffold1459 (41-137)||(1683-1779)
[»] scaffold0298 (1 HSPs)
scaffold0298 (139-215)||(9799-9875)
[»] scaffold0215 (1 HSPs)
scaffold0215 (13-137)||(28146-28270)
[»] scaffold0177 (1 HSPs)
scaffold0177 (13-137)||(12007-12131)
[»] scaffold0040 (1 HSPs)
scaffold0040 (22-137)||(111558-111673)
[»] scaffold1881 (1 HSPs)
scaffold1881 (13-137)||(1048-1172)
[»] scaffold0138 (1 HSPs)
scaffold0138 (22-234)||(6641-6853)
[»] scaffold0312 (1 HSPs)
scaffold0312 (22-137)||(599-714)
[»] scaffold0130 (1 HSPs)
scaffold0130 (19-146)||(4531-4658)
[»] scaffold0084 (1 HSPs)
scaffold0084 (22-137)||(7761-7876)
[»] scaffold0379 (1 HSPs)
scaffold0379 (19-137)||(5540-5658)
[»] scaffold0405 (1 HSPs)
scaffold0405 (22-59)||(1040-1077)
[»] scaffold0335 (1 HSPs)
scaffold0335 (103-188)||(4850-4935)
[»] scaffold0181 (1 HSPs)
scaffold0181 (13-86)||(29618-29691)
[»] scaffold0575 (1 HSPs)
scaffold0575 (22-130)||(4121-4229)


Alignment Details
Target: scaffold2111 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 374 - 133
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  374 aactctgcaagctcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggtactagatcgatggagaactcaacctccctttctggtg 275  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||||||| |||||    
T  274 gtacatctggaatctcatccggaaaaacttcaggaaactcattcaccactggtaactagtcgatcacagcttggttttctaacgacaaacatgctattag 175  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  174 agaatacatcagaatcccatctcgttctacctgcttcatctc 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 19615153 - 19615394
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19615153 aactcagcaagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggtactagatcgatggagaactcaacctccctttctggtg 19615252  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||||||||| |||||||||     
T  19615253 gtacatctggaatctcatccggaaaaacttcaggaaactcgttcaccactggtaacctgccaatcacagcttggttttctaacgacaaatatgccattaa 19615352  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  19615353 agaatacatcagaatcccatctcgttctagctgcttcatctc 19615394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 15342930 - 15343149
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| ||||||||| || ||| ||||| || || || || ||||| ||||||||||| |||||| |||| || ||| ||||||||||||    
T  15342930 gacatacggtacggtgccatcgacatcggctttgttcccggaacaaggtcaatggaaaactcaacctccctttcttgtggcacgtctggaatctcatccg 15343029  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  15343030 gaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacagcctgattttctaacgacaaatatgccattaaagaatacatcagaattccatc 15343129  T
Q  222 tcgttctagctgcatcatct 241  Q
      |||||| |||| ||||||    
T  15343130 atgttctaactgcttcatct 15343149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 14140172 - 14140397
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| |||||| |||||||| |||||||||||| |||||||||||| || || || || || ||||| ||||| || |||||||| |||||  ||||||    
T  14140172 gatgctgacatatgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaatcgaaaactccacctccctctctggtggcacatcaggaatct 14140271  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||  ||||| || || || ||||||||||||||  |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |||    
T  14140272 cattaggaaacacctccgggaactcattcaccacatgtaacctgtcaatcacagcttgattttctaacgacagatatgccattagagaatacatcaaaat 14140371  T
Q  216 cccatctcgttctagctgcatcatct 241  Q
     ||||| ||||||| |||| ||||||    
T  14140372 tccatcacgttctaactgcttcatct 14140397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 15100362 - 15100154
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||||||||||||||| |||||| |||    
T  15100362 tcggacgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctctctttctggtggcacatctggaa 15100263  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||| ||| | ||| |||| ||||||||||||||||| || |||||  ||||||| | |||| |||||||    
T  15100262 tctcatcaggaaaaacttctggaaattcattcacaactggcaacttgtcaatcacagcttgattttccaatgacaagtatgccatcaaagaaaacatcag 15100163  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  15100162 aattccatc 15100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 16948222 - 16948011
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||| |||||||| || || || || || || |||||||| || |||||||| |||||   ||||||||| |    
T  16948222 gacatacgataaggtgccatcgacaccggctttgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcagaaatctcatcag 16948123  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||   |||||||| ||||||||||||||| |||||    
T  16948122 gaaacacttctggaaattcattcaccactagcaacttgtcaatcacagcttgattttctaacgacaagtttgccattaaagaatacatcagaattccatc 16948023  T
Q  222 tcgttctagctg 233  Q
     |||||||||||    
T  16948022 acgttctagctg 16948011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 13966418 - 13966213
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  13966418 gacatacggtatggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 13966319  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||  ||||| |||||||| ||  |||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  13966318 gaaatacttttggaaattcattcactacaggtaacctgtcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 13966219  T
Q  222 tcgttc 227  Q
     |||||    
T  13966218 acgttc 13966213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 26116340 - 26116135
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || || || || || || |||||||| ||||||||||| |||||  |||||||||| |    
T  26116340 gacatacggtacggtgccatcgacaccggcttagttcctggaacaaggtcaattgaaaattcaacctccctttctggtggcacatcaggaatctcatcag 26116241  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  ||||||  || ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  26116240 gaaacacttccggaaattcattcactacaggtaacccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 26116141  T
Q  222 tcgttc 227  Q
     |||||    
T  26116140 acgttc 26116135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 16070056 - 16069848
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| ||||||||| || |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  16070056 tcggacgccgacatacgataaggtgccatcgacatcggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 16069957  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||| ||| | || || || |||||||||||||| || || |||||  ||||||||| |||| |||||||    
T  16069956 tctcatcaggaaaaacttctggaaattcattcacaactggcaatctatcaatcacagcttgattctccaatgacaagtatgccattaaagaaaacatcag 16069857  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  16069856 aattccatc 16069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 13675951 - 13676149
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||||||| | || || || ||  | || |||||||| || |||||| | |||||| ||||||| ||||    
T  13675951 gacatacgataaggtgccatcgacaccggcttcgttcctagaacaaggtcaattaa-aattcaacctccctctctggtagcacatctggaatctcgtccg 13676049  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||||||||||||||| | | | |||||||| |||| ||||||||| |||||||||||| ||||||| | |||| |||| ||||| |||||    
T  13676050 gaaaaacttcaggaaactcattcacaattggcaacctgtcaatcagagcttgattctctaacgacaaatatgccatcaaagaaaacataagaattccatc 13676149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 11386185 - 11385962
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||| ||| |||||||||||| |||||||||||| || || || || || ||||| ||||| || || ||||| |||||  | ||||    
T  11386185 gatgctgacatacgatatggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaactctacctccctctccggtggcacatcagggatct 11386086  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| || ||||| || |||||||| ||  |||| ||||| |||||||| ||||| || ||||||||| ||||||| | |||||||||||||||    
T  11386085 catcaggaaacacctcagggaattcattcactaccggtaatctgtcaatcacagcctgattctccaacgacaaagatgccatcaaagaatacatcagaat 11385986  T
Q  216 cccatctcgttctagctgcatcat 239  Q
     ||||| ||||||| |||| ||||    
T  11385985 tccatcacgttctaactgcttcat 11385962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 14284130 - 14283919
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| |||||||| || ||| |||||||||||| ||| |||||||| || || || || || ||||| ||||| || |||||||| |||||  ||||||    
T  14284130 gatgctgacatacggtatggtgccatcgacaccggctttgttcctggaacaaggtcaatcgaaaactccacctccctctctggtggcacatcaggaatct 14284031  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| |  ||  |||| |||||||||||  |||||||||| ||||||||||||||||| ||||||||  ||||||| | |||||||||||||||    
T  14284030 catcaggaaacatctccagaaattcattcaccaccggtaacctgtcaatcacagcttgattttccaacgacaaggatgccatcaaagaatacatcagaat 14283931  T
Q  216 cccatctcgttc 227  Q
     ||||| |||||    
T  14283930 tccatcacgttc 14283919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 241
Target Start/End: Complemental strand, 18051703 - 18051484
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || |||  ||||||||||| ||| ||||| || || || || || || ||||| ||||| || ||||| || |||||  |||||||||| |    
T  18051703 gacatacggtacggtgtcatcgacaccggctttgttccaggaacaaggtcaattgaaaactccacctccctctctggcggcacatcaggaatctcatcag 18051604  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || ||||||||||||||||||  || | |||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||    
T  18051603 ggaacacctctggaaactcattcaccactgctagcttgtcaatcacagcttgattttctaacgacagatatgccattagagaaaacatcagaattccatc 18051504  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  18051503 acgttctaactgcttcatct 18051484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 21754911 - 21755116
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||||||||| || || || || || || || |||| ||| || |||||| | |||||  |||||||||| |    
T  21754911 gacatacggtatggtgccatcgacaccggcttcgttccgggaacaaggtcaattgaaaattcaatctccctctctggtagcacatcaggaatctcatcag 21755010  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| ||||| |||||||| ||  ||||| | || ||||||||||||| ||||||||||||   |||||||||||||||||||||||| |||||    
T  21755011 gaaaaacttctggaaattcattcactacaggtaacatatcaatcacagcttgatgttctaacgacaattgtgccattagagaatacatcagaattccatc 21755110  T
Q  222 tcgttc 227  Q
     |||||    
T  21755111 acgttc 21755116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 26092548 - 26092343
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  26092548 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 26092449  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  26092448 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 26092349  T
Q  222 tcgttc 227  Q
     |||||    
T  26092348 acgttc 26092343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 49154800 - 49155005
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || ||||| |||||||| || |||||||| |||||  |||||||||| |    
T  49154800 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgagaattcaacctccctctctggtggcacatcaggaatctcatcag 49154899  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || | ||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  49154900 ggaatacttctggaaattcattcactacaggtaaaccatcaaccacagcttgattttctaacgacaactgtgccattagagaatacatcaggataccatc 49154999  T
Q  222 tcgttc 227  Q
     |||||    
T  49155000 acgttc 49155005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 14262004 - 14261783
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| || |||||||| |||||| |||    
T  14262004 tcggacgccgacatacggtaaggtgccatcgacaccggcttcgttccaggcacaagatcgattgaaaattcaacctccctctctggtggcacatctggaa 14261905  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| ||| |||| ||  | || || || |||||||||||||| || || |||||  | ||||| | |||| |||| ||    
T  14261904 tctcatcaggaaaaacttctggaaattcactcacaaccggcaatctatcaatcacagcttgattctccaatgacaagtacgccatcaaagaaaacattag 14261805  T
Q  213 aatcccatctcgttctagctgc 234  Q
    |||  |||| ||||||| ||||    
T  14261804 aatttcatcacgttctaactgc 14261783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 8710103 - 8710257
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  8710103 gacatacgataaggtgccatcgagaccgacttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 8710202  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  8710203 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 8710257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 14334894 - 14335048
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  14334894 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatcgg 14334993  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  14334994 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcaccgcttgatt 14335048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 44789123 - 44788969
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  |||||||||| |    
T  44789123 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatctg 44789024  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  44789023 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 44788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 10873188 - 10873342
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  10873188 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 10873287  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||||||||| || |||  ||||||  ||||||| || ||||| ||||||||    
T  10873288 gaaaaacttcagggaattcacacaccaccggtaacctatcaatcactgcttgatt 10873342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 13688539 - 13688693
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| |  ||||| ||||||||||  |    
T  13688539 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctctggagacacatcaagaatctcatttg 13688638  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  13688639 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 13688693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 15158829 - 15158675
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||| ||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  15158829 gacatacgataaggtgccatcgagaccggctttgttccagggacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 15158730  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  15158729 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 15158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 18587943 - 18587789
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  18587943 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 18587844  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  |||||   ||||||| || ||||| ||||||||    
T  18587843 gaaaaacttcaggaaattcacacaccatcggtaacctatcaatcactgcttgatt 18587789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 11234994 - 11234857
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  11234994 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 11234895  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccact 150  Q
    ||||||| ||||||||||||||||| |||  |||||||    
T  11234894 tctcatctggaaaaacttcaggaaattcacacaccact 11234857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 12459221 - 12459338
Alignment:
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| ||||| ||||| ||||||||||   | |||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||| |||||    
T  12459221 catcaggaaacacttctggaaattcattcaccataggcaacctgtctatcacaacttgattttctaacgacaaatatgccattaaagaatacataagaat 12459320  T
Q  216 cccatctcgttctagctg 233  Q
     || || |||||||||||    
T  12459321 tccgtcccgttctagctg 12459338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 13023856 - 13024055
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||| |||||||||||| |||||||||| | || || || || || || |||||||| ||||||||||| ||||| ||||             
T  13023856 gacatacggtaaggtgccatcgacaccggcttcgttcctagaacaaggtcaattgaaaattcaacctccctttctggtggcacatc-agaa--------- 13023945  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
      || ||||| ||||| |||||||| ||  |||||||||| |||||||||||||||||||  || ||| | ||||||| ||||||||||||||| |||||    
T  13023946 --aacacttctggaaattcattcacaaccggtaacctgtcaatcacagcttgattttctacggagaaataagccattaaagaatacatcagaattccatc 13024043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 11300963 - 11300797
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  11300963 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 11300864  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaa 188  Q
    | || ||||| ||||| |||||||| ||  | || |  || ||||||||||||||||||||||||||    
T  11300863 ggaatacttctggaaattcattcactacaggcaaaccatcaatcacagcttgattttctaacgacaa 11300797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 11550884 - 11550759
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| || || ||||| || ||||| |||    
T  11550884 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacatcaaga 11550785  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||| |||||||| ||||||||    
T  11550784 atttcatctggaaaaacatcaggaaa 11550759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 14957042 - 14957167
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| || || ||||| || |||||  ||    
T  14957042 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacatcagga 14957141  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||| |||||||||||||||||    
T  14957142 atttcatctggaaaaacttcaggaaa 14957167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 18180243 - 18180358
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  18180243 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 18180342  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  18180343 gaaaaacttcaggaaa 18180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 9590866 - 9590981
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  |||| ||||| |    
T  9590866 gacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttccctctctggaggcacatccggaatttcatctg 9590965  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  9590966 gaaaaacttcaggaaa 9590981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 12799191 - 12799052
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttcta 181  Q
    |||||||| || |||||||| |||||| |||||| ||| ||||||||||| | ||| || ||||| ||| | || ||||| |||||||||||||| || |    
T  12799191 tcaacctccctctctggtggcacatctggaatcttatcaggaaaaacttccgaaaattcgttcacaactggcaatctgtcaatcacagcttgattctcca 12799092  T
Q  182 acgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | ||||   ||||||| | |||| |||||||||| |||||    
T  12799091 atgacaggtatgccatcaaagaaaacatcagaattccatc 12799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 16727164 - 16727040
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  | |    
T  16727164 tcggatgcagacatacgataaggtgccatcgacaccggcttcgttcccggaacaagatcaatagaaaactcgacttccctctctggaggcacatcaggta 16727065  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | || ||  ||||||||||||||||    
T  16727064 tttcgtctagaaaaacttcaggaaa 16727040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 17704236 - 17704112
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  | |    
T  17704236 tcggatgcagacatacgataaggtgccatcgacaccggcttcgttcccggaacaagatcaatagaaaactcgacttccctctctggaggcacatcaggta 17704137  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | || ||  ||||||||||||||||    
T  17704136 tttcgtctagaaaaacttcaggaaa 17704112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 12204550 - 12204375
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||  |||||||||| | |||||| || || || ||||| || || || |||||||| || ||||| || ||||| ||||||||||| |    
T  12204550 gacatacggtaaggcgccatcgacacaggcttcgtacccggaacaagatcaattgaaaattcaacctccctctctggcggcacatcaagaatctcatcag 12204451  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    |||| ||||   |||| |||||||| ||  | ||  | || |||||||||||||| |||||||||||  |||||||    
T  12204450 gaaagacttatagaaattcattcacaaccggcaatatatcaatcacagcttgattctctaacgacaagtatgccat 12204375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 8200634 - 8200700
Alignment:
Q  110 gaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||| ||||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  8200634 gaatctcatctggaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 8200700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 19149570 - 19149664
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||| || |||||||| |||||| |||||||||| ||||||||||| ||||| ||| |||| ||| | || || || |||||| |||||||    
T  19149570 tcaacctccctctctggtggcacatctggaatctcatcaggaaaaacttctggaaattcactcacaactggcaatctatcaatcacaacttgatt 19149664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 20748969 - 20749063
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||| || |||||||| |||||| |||||||||| ||||||||||| ||||| ||| |||| ||| | || || || |||||| |||||||    
T  20748969 tcaacctccctctctggtggcacatctggaatctcatcaggaaaaacttctggaaattcactcacaactggcaatctatcaatcacaacttgatt 20749063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 12689990 - 12690115
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| |||||| || || || ||||  || || |||||||| || || ||||| || |||||  ||    
T  12689990 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgtgccaggaacaagattaatagaaaactcaacttccctctctggaggcacatccgga 12690089  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||| ||| ||||||| |||||    
T  12690090 atttcatctggataaacttcgggaaa 12690115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 11770177 - 11770059
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||||||||||  ||| ||||| | |||||| || || || || || || || || ||||| ||||||||||| || |||||  |||| ||||    
T  11770177 gccgacatacgataaggtgtcatagacacaggcttcgtacccggaacaaggtcaatcgaaaattcaacttctctttctggaggcacatcaggaatttcat 11770078  T
Q  119 ccggaaaaacttcaggaaa 137  Q
    | ||||||||||| |||||    
T  11770077 caggaaaaacttctggaaa 11770059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 14150216 - 14150170
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcc 59  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||    
T  14150216 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttcc 14150170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 12799302 - 12799253
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctgg 62  Q
    ||||| ||||||||||| |||||| ||||||| |||| ||||||||||||    
T  12799302 tcggacgccgacatacggtaaggtgccatcgataccggcttcgttcctgg 12799253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 115079 - 115320
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  115079 aactcagcaagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcttggtactagatcgatggagaactcaacctccctttctggtg 115178  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| |||||||||||| |||||||||||||||||| || |||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  115179 gtacatctggaatctcatccgaaaaaacttcaggaaactcgttaaccactggtaacttgtcgatcacagcttggttttctaaggacaaacatgccattag 115278  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  115279 agaatacatcagaatcccatctcgttctagctgcttcatctc 115320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 94644 - 94455
Alignment:
Q  38 ccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    |||||||||| |  |||||||| || || ||||| || ||||| ||||| |||||||||||||| || ||  |||||| ||| |||||||||||||||||    
T  94644 ccatcgacactggtttcgttcccggaacaagatcaatcgagaattcaacttctctttctggtggcacgtcaggaatctaatctggaaaaacttcaggaaa 94545  T
Q  138 ctcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
     |||||||||||| |||  |||||||||||||||||||| |||||||||||  ||||||| | |||| |||| ||||| |||||||||||    
T  94544 ttcattcaccactggtagtctgtcgatcacagcttgattctctaacgacaatgatgccatcaaagaaaacataagaattccatctcgttc 94455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3957 - 3716
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  3957 aactcagcaagttcggatgccgacatacgataaggtgtcatcgacaccggcttcgttcctggtactagatcgatggagaactcaacctccctctctggtg 3858  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||| ||| |||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3857 gtacgtctggaatttcatctggaaaaacttcagggaactcattcaccactggtaacctgtcgatcacagcttggttttctaacgacaaacatgccattag 3758  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  3757 agaatacatcagaatcccgtctcgttctagctgcttcatctc 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13970132 - 13969891
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13970132 aactcagcaagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggtactagatcgatggagaactcaacctccctttctggtg 13970033  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||| | ||||||||||| ||||||||||||||| |||||||||     
T  13970032 gtacatctggaatctcatccggaaaaacttcaggaaactcgctcaccactggtaacctgccaatcacagcttggttttctaacgacaaatatgccattaa 13969933  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  13969932 agaatacatcaaaatcccatctcgttctagctgcttcatctc 13969891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 14088790 - 14089031
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  14088790 aactcagcaagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggcaccagatcgatggagaactcaacctccctttctggtg 14088889  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||||||||| |||||||||     
T  14088890 gtacatctggaatctcatccggaaaaacttcaggaaactcgttcaccactggtaacctgccaatcacagcttggttttctaacgacaaatatgccattaa 14088989  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  14088990 agaatacatcagaatcccatctcgttctagctgcttcatctc 14089031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 227
Target Start/End: Complemental strand, 13318494 - 13318288
Alignment:
Q  21 cgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatcc 120  Q
    |||||||||||||||| ||| |||||| | |||||||||||| || ||||| || |||||||||| ||| ||||||||||| |||||| |||||||||||    
T  13318494 cgacatacgataaggtgccagcgacactggcttcgttcctggaacaagatcaattgagaactcaatctccctttctggtggcacatctggaatctcatcc 13318395  T
Q  121 ggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccat 220  Q
    ||||||||||||||||| |||||||||||| |||||||||| || ||||||||||| |||||| ||||| ||||||| | |||| |||| ||||| ||||    
T  13318394 ggaaaaacttcaggaaattcattcaccactggtaacctgtcaattacagcttgattctctaacaacaaagatgccatcaaagaaaacataagaattccat 13318295  T
Q  221 ctcgttc 227  Q
    |||||||    
T  13318294 ctcgttc 13318288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 11949908 - 11949700
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||| | || || || || || || |||||||| ||||| | |||||||||| |||    
T  11949908 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttcctagaacaaggtcaattgaaaattcaacctccctttccgatggtacatctggaa 11949809  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |||| ||    
T  11949808 tctcatcaggaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacagcttgattttctaacgacaaatatgccattaaagaaaacataag 11949709  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  11949708 aattccatc 11949700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 31941041 - 31941240
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||| ||||||||| |||||||||||| ||||||||| || || || || || || || |||||||| ||||||||||| |||||| ||||||||||||    
T  31941041 gacatgcgataaggtgccatcgacaccggcttcgttcccggaacaaggtcaattgaaaattcaacctccctttctggtggcacatctggaatctcatccg 31941140  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||| | |||| |||| ||||| |||||    
T  31941141 gaaaaacttcaggaaactcattcaccaccggtaacctgtcaatcacagcttgattttctaacgacaaagatgccatcaaagaaaacataagaattccatc 31941240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 18132337 - 18132138
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||||||||| |  || || || || || |||||||| ||||||||||| |||| | ||||||||||||    
T  18132337 gacatacgataaggtgccatcgacaccggcttcgttcctggaataaggtcaattgaaaattcaacctccctttctggtggcacatttggaatctcatccg 18132238  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
     |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||| | |||| |||| ||||| |||||    
T  18132237 aaaaaacttcaggaaactcattcaccactggaaacctgtcaatcacagcttgattttctaacgacaaatatgccatcatagaaaacataagaattccatc 18132138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 31693176 - 31692977
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||| ||||||||| |||||||||||| ||||||||| || || || || || || |  |||||||| ||||||||||| |||||||||||||||||||    
T  31693176 gacatgcgataaggtgccatcgacaccggcttcgttcccggaacaaggtcaattgaaagttcaacctccctttctggtggcacatctagaatctcatccg 31693077  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||||||| ||||||| | |||| |||| ||||| |||||    
T  31693076 gaaaaacttcaggaaactcattcaccaccggtaacctgtcaatcacaacttgattttctaacgacaaagatgccatcaaagaaaacataagaattccatc 31692977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 24189439 - 24189654
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| || ||| |||||||||||| |||||||||||| || || || || || || ||||||||||| || ||||| |||||| |||||||||    
T  24189439 gccgacatacggtacggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctctctctccggtggcacatctggaatctcat 24189538  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    | ||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||| || || |||||  ||||||| | ||||||||||||||| ||    
T  24189539 caggaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacagcctgattctccaaagacaaggatgccatcaaagaatacatcagaattcc 24189638  T
Q  219 atctcgttctagctgc 234  Q
     || ||||||||||||    
T  24189639 gtcacgttctagctgc 24189654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 12358518 - 12358319
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||| ||||| |||||||||||| || || || || || || |||||||| ||||||||||| |||||| ||||||||||||    
T  12358518 gacatacgataaggtgccatcggcaccgacttcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggcacatctggaatctcatccg 12358419  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||||||||||||||| ||  | ||||| || |||||| ||||||| |||||||||||| ||||||| | |||| |||| ||||| |||||    
T  12358418 gaaaaacttcaggaaactcattcacaaccggcaacctatcaatcacaacttgattctctaacgacaaatatgccatcaaagaaaacataagaattccatc 12358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 17188509 - 17188731
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||| | || ||| |||||||||||| |||||||||||| || || || || || || ||||||||||| || ||||| |||||| |||||||||    
T  17188509 gccgacatatggtacggtgccatcgacaccgacttcgttcctggaacaaggtcaattgaaaattcaacctctctctcaggtggcacatctggaatctcat 17188608  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    | ||||||||||||||||| || ||||||||| |||||||||| |||||| | ||||| || || |||||  ||||||| | ||||||||||||||| ||    
T  17188609 caggaaaaacttcaggaaattcgttcaccactggtaacctgtcaatcacaacctgattctccaaagacaaggatgccatcaaagaatacatcagaattcc 17188708  T
Q  219 atctcgttctagctgcatcatct 241  Q
    ||| |||||||||||| ||||||    
T  17188709 atcacgttctagctgcttcatct 17188731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 241
Target Start/End: Complemental strand, 16832519 - 16832300
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||||||||| || |||||||| || | | ||||||||||||    
T  16832519 gacatacggtatggtgccatcgacaccggctttgttcccggaacaaggtcaatcgaaaactcaacctccctctctggtggcacgtatggaatctcatccg 16832420  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||| ||||||||| |||||||||||| |||||||| | |||||||||||||||||||| |||| | ||||||||| ||||||||||| ||  |||||    
T  16832419 gaaaaatttcaggaaattcattcaccactggtaacctgacaatcacagcttgattttctaatgacagatatgccattaaagaatacatcaaaactccatc 16832320  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  16832319 acgttctaactgcttcatct 16832300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 17493775 - 17493959
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || ||| |||| |||||| |||    
T  17493775 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctcttgtggcacatctggaa 17493874  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| |||||||| ||||||||||||||||| ||| | |||||||| |||||||||||||| |||| ||||||| |||||||    
T  17493875 tctcatcaggaaaaacctcaggaaactcattcacaactggcaacctgtcaatcacagcttgattctctagcgacaaatatgccat 17493959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 10418020 - 10417831
Alignment:
Q  38 ccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    |||||||||| |  |||||||| || || ||||| || ||||||||||| |||||||||||||| |||||  ||||||| || ||||||||||| |||||    
T  10418020 ccatcgacactggtttcgttcccggaacaagatcaatcgagaactcaacttctctttctggtggcacatcaggaatctcgtctggaaaaacttcgggaaa 10417921  T
Q  138 ctcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
     |||||||||||| |||  |||||||||||||||||||| |||||||||||  ||||||| | |||| |||| ||||| |||||||||||    
T  10417920 ttcattcaccactggtagtctgtcgatcacagcttgattctctaacgacaatgatgccatcaaagaaaacataagaattccatctcgttc 10417831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 14291532 - 14291311
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| ||||||||||| |||||| |||    
T  14291532 tcggacgccgacatacgataaggtgccatcgacaccggcttcgttccgggcacaagatcgattgaaaattcaacctccctttctggtggcacatctggaa 14291433  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||||| | | || || || |||||||||||||| || || |||||  ||||||| | |||| |||| |     
T  14291432 tctcatcaggaaaaacttctggaaattcattcaccaatggaaatctatcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacattaa 14291333  T
Q  213 aatcccatctcgttctagctgc 234  Q
     || ||||| ||||||| ||||    
T  14291332 gattccatcacgttctaactgc 14291311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 12180481 - 12180681
Alignment:
Q  21 cgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatcc 120  Q
    ||||||||||||| || | |||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||||||||||||||     
T  12180481 cgacatacgataaagtgctatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctagaatctcatca 12180580  T
Q  121 ggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccat 220  Q
    ||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||||||||| || |||||  ||||||| | |||| |||| ||||| ||||    
T  12180581 ggaaaaacttccggaaattcattcacaactggcaacctgtcaatcacagcttgattttccaatgacaagtatgccatcaaagaaaacataagaattccat 12180680  T
Q  221 c 221  Q
    |    
T  12180681 c 12180681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 13944162 - 13944381
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| || ||||| || |||||  |||||||||| |    
T  13944162 gacatacggtacggtgccatcgacaccggctttgttccgggaacaaggtcaattgaaaactccacctccctctctggcggcacatcgggaatctcatcag 13944261  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| || || ||||||||||||||||||  || | |||| |||||| |||| ||||||||||||| | ||||||||||||||||||||||||| |||||    
T  13944262 gaaacacctccggaaactcattcaccactgctagcttgtcaatcacaacttggttttctaacgacagatatgccattagagaatacatcagaattccatc 13944361  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  13944362 ccgttctaactgcttcatct 13944381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 44779385 - 44779604
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| || ||||| || |||||  |||||||||| |    
T  44779385 gacatacggtacggtgccatcgacaccggctttgttccaggaacaaggtcaattgaaaactccacctccctctctggcggcacatcaggaatctcatcag 44779484  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || ||||||||||||||||||  || | |||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||    
T  44779485 ggaacacctccggaaactcattcaccactgctagcttgtcaatcacagcttgattttctaacgacagatatgccattagagaaaacatcagaattccatc 44779584  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  44779585 acgttctaactgcttcatct 44779604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 28756457 - 28756662
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| ||||||||||| |||||  |||||||||| |    
T  28756457 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctttctggtggcacatcaggaatctcatcag 28756556  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  28756557 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 28756656  T
Q  222 tcgttc 227  Q
     |||||    
T  28756657 acgttc 28756662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 12272473 - 12272651
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| || |  ||||| || || |||||||| || |||||||| ||||||  ||||||||    
T  12272473 gccgacatacggtaaggtgccatcgacaccgacttcgttcctggaacaatgtcgattgaaaattcaacctccctctctggtggcacatctgaaatctcat 12272572  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    | ||||||||||| ||||| |||||||| ||| | ||| |||| ||||||||||||||||| || |||||  |||||||    
T  12272573 caggaaaaacttctggaaattcattcacaactggcaacatgtcaatcacagcttgattttccaatgacaagtatgccat 12272651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 16327640 - 16327498
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttcta 181  Q
    |||||||| || |||||||| |||||  |||||||||| ||||| ||||| || ||||||||||| ||  |||||||||| |||| ||||||||||||||    
T  16327640 tcaacctccctctctggtggcacatcaggaatctcatcaggaaacacttctgggaactcattcactacaggtaacctgtcaatcatagcttgattttcta 16327541  T
Q  182 acgacaaacatgccattagagaatacatcagaatcccatctcg 224  Q
    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  16327540 acgacaaatatgccattaaagaaaacatcagaatcccgtctcg 16327498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 12510474 - 12510269
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||| |  ||||||||||| || || || || || || ||||||||||| |||||||| |||||  |||||||||| |    
T  12510474 gacatacggtatggtgccatcgacactggattcgttcctggaacaaggtcaattgaaaattcaacctctctctctggtggcacatcaggaatctcatcag 12510375  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  |||||||||| | || |||||||||||||||||||||   |||||| | |||||||||||||||||| ||    
T  12510374 gaaacacttctggaaattcattcactacaggtaacctgtcaaccatagcttgattttctaacgacaattgtgccatcaaagaatacatcagaatcccgtc 12510275  T
Q  222 tcgttc 227  Q
     |||||    
T  12510274 ccgttc 12510269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 47126082 - 47126287
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| ||||||||||| |||||  |||||||||| |    
T  47126082 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctttctggtggcacatcaggaatctcatcag 47126181  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||| ||||||||||| || |||||    
T  47126182 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagggaatacatcaggataccatc 47126281  T
Q  222 tcgttc 227  Q
     |||||    
T  47126282 acgttc 47126287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 10408106 - 10408311
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || || || || || |||||||| || || |||||||| |||||  |||||||||| |    
T  10408106 gacatacggtacggtgccatcgacaccggcttagttcctggaacaaggtctattgaaaactcaacttccctctctggtggcacatcaggaatctcatcag 10408205  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  10408206 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 10408305  T
Q  222 tcgttc 227  Q
     |||||    
T  10408306 acgttc 10408311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 241
Target Start/End: Complemental strand, 8745381 - 8745162
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| |||||||| || |||||  |||||||||| |    
T  8745381 gacatacggtacggtgccatcgacaccggctttgttccaggaacaaggtcaattgaaaactccacctccctttctggcggcacatcaggaatctcatcgg 8745282  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | ||    || |||||||||||| || ||  || | |||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||    
T  8745281 ggaaccgctccggaaactcattcgcctctgctagcttgtcaatcacagcttgattttctaacgacagatatgccattagagaaaacatcagaattccatc 8745182  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  8745181 acgttctaactgcttcatct 8745162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 13254818 - 13254972
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  13254818 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 13254917  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  13254918 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 13254972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 16637901 - 16638055
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  16637901 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 16638000  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  16638001 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 16638055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 26791415 - 26791261
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  26791415 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 26791316  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  26791315 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcaccgcttgatt 26791261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 43164803 - 43164957
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  43164803 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 43164902  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  43164903 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 43164957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 15400529 - 15400365
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  ||    
T  15400529 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgttcccggaacaagatcaatagaaaactcaacttctctctctggaggcacatcagga 15400430  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||| ||||||||||||||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  15400429 atctcatctggaaaaacttcaggaaattcacacaccacttgtagcttatcaatcactgcttgatt 15400365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 15587403 - 15587240
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  15587403 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 15587304  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  15587303 tctcatctggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 15587240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 12888837 - 12888991
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  12888837 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 12888936  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  12888937 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 12888991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 15346247 - 15346093
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  15346247 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 15346148  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  15346147 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 15346093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 20060056 - 20059902
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  20060056 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 20059957  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  20059956 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 20059902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 48427575 - 48427729
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  |||||||||| |    
T  48427575 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatctg 48427674  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  48427675 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 48427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 16378920 - 16378708
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||  |||  ||||||| || || || || || ||||| ||||| || |||||||| |||||  || ||||||| |    
T  16378920 gacatacggtacggtgccatcgacaccagctttattcctggaacaaggtcaatcgaaaactccacctccctctctggtggcacatcaggactctcatcag 16378821  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| || || |||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||| | ||||     |||||||||||| ||| |||||    
T  16378820 gaaacacctccggaaactcattcaccactggtaacttgtcaatcacagcttggttttctaacgacagatatgc-----gagaatacatcaaaattccatc 16378726  T
Q  222 tcgttctagctgcatcat 239  Q
     ||||||| |||| ||||    
T  16378725 acgttctaactgcttcat 16378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 16826281 - 16826097
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| |||||||||||| || || |  || || || |||||||| || |||||||| |||||| |||    
T  16826281 tcggacgccgacatacggtaaggtgccatcgacaccggcttcgttcctggaacaaggttaattgaaaattcaacctccctctctggtggcacatctggaa 16826182  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| ||||||||||| | ||| |||||||| ||  | || ||||  |||||||||||||| || || |||||  |||||||    
T  16826181 tctcatcaggaaaaacttctgaaaattcattcacaaccggcaatctgttaatcacagcttgattctccaatgacaagtatgccat 16826097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 5422941 - 5422778
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  5422941 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 5422842  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||  |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  5422841 tctcatctagaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 5422778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 15714067 - 15713904
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  15714067 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 15713968  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    || |||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  15713967 tcccatctggaaaaacttcaggaaaatcacacaccaccggtaacctatcaatcactgcttgatt 15713904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 10007728 - 10007882
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  10007728 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 10007827  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||  | ||||| ||||||||    
T  10007828 gaaaaacttcaggaaattcacacaccaccggtaacctaccaatcactgcttgatt 10007882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 10908338 - 10908492
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  10908338 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 10908437  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||  | ||||| ||||||||    
T  10908438 gaaaaacttcaggaaattcacacaccaccggtaacctaccaatcactgcttgatt 10908492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 15229738 - 15229916
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||  |||||||||| | |||||| || || || ||||| || || || ||||||||||| ||||| ||||||||  |||||||||    
T  15229738 gccgacatacggtaaggcgccatcgacacaggcttcgtacccggaacaagatcaattgaaaattcaacctctctctctggcggtacatcgggaatctcat 15229837  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    | ||||||||||| ||||| |||||||| ||  | || || || |||||||||||||| || ||||||||  |||||||    
T  15229838 caggaaaaacttctggaaattcattcacaaccggcaatctatcaatcacagcttgattctccaacgacaagtatgccat 15229916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 15235606 - 15235784
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||  |||||||||| | |||||| || || || ||||| || || || ||||||||||| ||||| ||||||||  |||||||||    
T  15235606 gccgacatacggtaaggcgccatcgacacaggcttcgtacccggaacaagatcaattgaaaattcaacctctctctctggcggtacatcgggaatctcat 15235705  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    | ||||||||||| ||||| |||||||| ||  | || || || |||||||||||||| || ||||||||  |||||||    
T  15235706 caggaaaaacttctggaaattcattcacaaccggcaatctatcaatcacagcttgattctccaacgacaagtatgccat 15235784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 3688062 - 3688186
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  3688062 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 3688161  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    ||||||| |||||||||||||||||    
T  3688162 tctcatctggaaaaacttcaggaaa 3688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 14874579 - 14874455
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  14874579 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 14874480  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  14874479 tttcatctggaaaaacttcaggaaa 14874455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 15358201 - 15358365
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||| ||||||| ||||||||| || || ||||| ||  | |||||||| ||||| ||||| || |||||  ||    
T  15358201 ttcggaagcagacatacgataaggtgccattgacaccggcttcgttcccggaacaagatcaatacaaaactcaacttctctctctggaggcacatcagga 15358300  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||| ||||||||||||||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  15358301 atctcatctggaaaaacttcaggaaattcacacaccacttgtagcttatcaatcactgcttgatt 15358365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 11959078 - 11958961
Alignment:
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| ||||| || || |||||||| ||  |||||||||| |  ||| |||||||||||||||||||| ||||||||| ||||||||||| |||    
T  11959078 catcaggaaacacttctgggaattcattcacaaccggtaacctgtcaactacaacttgattttctaacgacaaatatgccattaaagaatacatcaaaat 11958979  T
Q  216 cccatctcgttctagctg 233  Q
     ||||| |||||||||||    
T  11958978 tccatcacgttctagctg 11958961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 16694283 - 16694407
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||| |||||| ||||||||| || || ||||| || || |||||||| || || ||||| || |||||| |||    
T  16694283 tcggaagcagacatacgataaggtgccatctacaccggcttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacatctggaa 16694382  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  16694383 tttcatctggaaaaacttcaggaaa 16694407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 14575125 - 14575299
Alignment:
Q  23 acatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccgg 122  Q
    ||||||| |||||| |||||||||||| |||||||||||| || |  || || || || |||||||| || |||||||| | |||| |||||| ||| ||    
T  14575125 acatacggtaaggtgccatcgacaccggcttcgttcctggaacaaagtcaattgaaaattcaacctccctctctggtggcatatctggaatctaatcagg 14575224  T
Q  123 aaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    |||||| || || || |||  ||| ||  | |||||||| |||||||||||||||||||| |||||  |||||||    
T  14575225 aaaaacctctgggaattcacacacaaccggcaacctgtcaatcacagcttgattttctaatgacaagtatgccat 14575299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 16754703 - 16754549
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| | ||||||| || || ||||| || || ||||| || || || ||||| || |||||  ||||||||||||    
T  16754703 gacatacgataaggtgccatcgagaccgacgtcgttccaggaacaagatcaatagaaaactcgacttccctctctggaggcacatcaggaatctcatccg 16754604  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  16754603 gaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 16754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 53383020 - 53382866
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  53383020 gacatacgataaggtgccatcgagaccggtttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 53382921  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||| | ||| ||| || ||||| ||||||||    
T  53382920 gaaaaacttcaggaaattcacacaccattggtagcctatcaatcactgcttgatt 53382866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 6602864 - 6602979
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  |||||||||| |    
T  6602864 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcgacttccctctctggaggcacatcaggaatctcatctg 6602963  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  6602964 gaaaaacttcaggaaa 6602979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 24185308 - 24185433
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| ||||| |||||| ||||||||| || || ||||| || || |||||||| || || ||||| || |||||  ||    
T  24185308 ttcggaagcagacatacgataaggtgccatcaacaccggcttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacatcatga 24185407  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||  |||||||||||||||||    
T  24185408 atttcatttggaaaaacttcaggaaa 24185433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 14579410 - 14579298
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| ||||| | ||||||||| || || ||||| || || || ||||| || |||||||| || |||||  |||| ||||| |    
T  14579410 gacatacgataaggtgtcatagacacaggcttcgttccaggaacaagatcaatagaaaattcaacttccctttctggaggcacatcaggaatttcatcag 14579311  T
Q  122 gaaaaacttcagg 134  Q
    |||||||||||||    
T  14579310 gaaaaacttcagg 14579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 16804958 - 16804834
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||| |||||  | |  ||||| || || |||||||| || || ||| | || |||||  |||    
T  16804958 tcggaagcagacatacgataaggtgccatcgacaccggctttgttccaagaatcagatcaatagaaaactcaacttccctctctagaggcacatcaggaa 16804859  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  16804858 tttcatctggaaaaacttcaggaaa 16804834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 11888296 - 11888248
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaactt 130  Q
    ||||||||||||||||| || |||||  |||||||||| ||||||||||    
T  11888296 tcaacctctctttctggcggcacatcaggaatctcatcaggaaaaactt 11888248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 34643515 - 34643274
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  34643515 aactcagcaagttcagatgccgacatacgataaggtgccatcgataccggcttcgttcctggtactagatcaatggagaactcaacctccctctctggtg 34643416  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||    
T  34643415 gtacatatggaatctcatccggaaaaacttcaggaaactcattcaccactggtaacctgtcgatcacagcttggttttccaacgacaaatatgccatcag 34643316  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  34643315 agaatacatcagaatcccgtctcgttctagttgcttcatctc 34643274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8761681 - 8761463
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| || || || || || || ||||||||| | || ||||    
T  8761681 aactcagcaagttcggatgccgacatacgatatggtgccatcgacaccggcttcgttcctgggacaaggtcaattgaaaattcaacctctttctccggtg 8761582  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||| |||||||||| |||||  ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||||||     
T  8761581 gcacatctggaatctcatcgggaaa--cttcaggaaactcattcaccactggtaacctgtcaattacagcttgattttctaacgacaaatatgccattaa 8761484  T
Q  201 agaatacatcagaatcccatc 221  Q
    |||| |||| ||||| |||||    
T  8761483 agaaaacataagaattccatc 8761463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 24516343 - 24516129
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| ||||||||| | |||||||||||||||||| | |||||||||| |||||||||||| || || || || || || ||||||||||| || ||||    
T  24516343 aactcagcaagttcgaaagccgacatacgataaggtgctatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctctctctccggtg 24516244  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| |||| ||| ||||| |||||||||||| ||||||| |     
T  24516243 gcacatctagaatctcatcaggaaaaacttcaggaaattcattcaccactggtaacctgtcaatcagagcgtgattctctaacgacaaatatgccatcaa 24516144  T
Q  201 agaatacatcagaat 215  Q
    |||| ||||||||||    
T  24516143 agaaaacatcagaat 24516129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 19437375 - 19437574
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||| |||||||||  ||||||||||| ||||||||| || || || || ||  | || |||||||||||||||||||| |||||| ||||||||||||    
T  19437375 gacatgcgataaggtgtcatcgacaccggcttcgttcccggaacaaggtcaattaaaaattcaacctctctttctggtggcacatctggaatctcatccg 19437474  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||| | |||| |||| ||||| |||||    
T  19437475 gaaaaacttcaggaaactcattcaccaccggtaacctgtcaatcacagcttgattttctaacgacaaggatgccatcaaagaaaacataagaattccatc 19437574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 19455387 - 19455595
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| ||||||  ||||||| ||| ||| |||||||| || || || || || || |||||||| || | |||||| |||||| |||    
T  19455387 tcggaagctgacatacggtaaggtgtcatcgacgccggctttgttcctggaacaaggtcaattgaaaattcaacctccctctttggtggcacatctggaa 19455486  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||| | |||| |||| ||    
T  19455487 tctcatccggaaaaacttcaggaaactcattcacaactggtaacctgtcgatcacagcttgattctctaacgacaaagatgccatcaaagaaaacataag 19455586  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  19455587 aattccatc 19455595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 14377833 - 14377616
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || || || || || || |||||||| || |||||||| |||||   ||    
T  14377833 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttcccggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcagaaa 14377734  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||| ||||| ||||| |||||||||||  | |||| ||| |||||| || ||||||||||||||||| ||||||||| ||||||||||||    
T  14377733 tctcatcaggaaacacttctggaaaatcattcaccaccggcaacccgtcaatcacaactcgattttctaacgacaaatatgccattaaagaatacatcag 14377634  T
Q  213 aatcccatctcgttctag 230  Q
    ||| ||||| ||||||||    
T  14377633 aattccatcacgttctag 14377616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 21567905 - 21567680
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||||| || || || || |||||||| ||||| || |||||||| |||||  ||||||    
T  21567905 gatgctgacatacgatatggcgccatcgacaccggcttcgttcctggaacaaggtcaatcgagaactccacctccctctctggtggcacatccggaatct 21567806  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| || || ||||| |||||||||||| |||||||||| |||||||| ||||| || || |||||| ||||||| | |||||||||||||||    
T  21567805 catcaggaaacacctccggaaattcattcaccactggtaacctgtcaatcacagcctgattctccaatgacaaagatgccatcaaagaatacatcagaat 21567706  T
Q  216 cccatctcgttctagctgcatcatct 241  Q
     ||||| |||| || |||| ||||||    
T  21567705 tccatcacgttttaactgcttcatct 21567680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 18797057 - 18797282
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||| || || || || || || ||||| || |||| |||||| |||||  ||||||    
T  18797057 gatgctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacttccctttttggtggcacatcaggaatct 18797156  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| || |||||||| ||||| |||||| ||||| |||| |||||||| ||||| |||||||| ||  ||||||| |  || |||||||||||    
T  18797157 catctggaaacacctcaggaaaatcatttaccactggtaacttgtcaatcacagcctgattctctaacgataaggatgccatcaatgagtacatcagaat 18797256  T
Q  216 cccatctcgttctagctgcatcatct 241  Q
     ||||| |||||||||||| ||||||    
T  18797257 tccatcacgttctagctgcttcatct 18797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 227
Target Start/End: Original strand, 15461725 - 15461914
Alignment:
Q  38 ccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    |||||||||| |  |||||||| || || ||||| || ||||||||||| || ||||||||||| |||||  |||||||||| ||||||||||| |||||    
T  15461725 ccatcgacactggtttcgttcccggaacaagatcaatcgagaactcaacttccctttctggtggcacatcaggaatctcatctggaaaaacttcgggaaa 15461824  T
Q  138 ctcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
     |||||||||||| |||  |||||||| ||||||||||| |||||||||||| ||||||| | |||| |||| || || |||||||||||    
T  15461825 ttcattcaccactggtagtctgtcgattacagcttgattctctaacgacaaagatgccatcaaagaaaacataaggattccatctcgttc 15461914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 24293690 - 24293536
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  ||||||||||||    
T  24293690 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatccg 24293591  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  24293590 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 24293536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 10466766 - 10466545
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctcttt-ctggtggtacatctaga 111  Q
    ||||| || |||||||| |||||| |||||||||||| ||| |||||||| || || || || || || ||||| || |||| |||||||  ||||  ||    
T  10466766 tcggaagctgacatacggtaaggtgccatcgacaccggctttgttcctggaacaagttcaattgaaaattcaacttcccttttctggtggcgcatcagga 10466667  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatca 211  Q
    |||||||| ||||| ||||| | ||| |||||||| ||||||||||| || |||||||||||||||||||  || ||| | ||||| |||||||||||||    
T  10466666 atctcatcaggaaacacttctgaaaattcattcacaactagtaacctatcaatcacagcttgattttctacggataaataggccatcagagaatacatca 10466567  T
Q  212 gaatcccatctcgttctagctg 233  Q
     ||| ||||| ||||| |||||    
T  10466566 aaattccatcacgttccagctg 10466545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 29590347 - 29590193
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  29590347 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 29590248  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  29590247 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 29590193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 2872720 - 2872557
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  2872720 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 2872621  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  2872620 tctcatctggaaaaacttcaggaaaatcacacaccaccggtaacctatcaatcactgcttgatt 2872557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 16574263 - 16574417
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  16574263 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 16574362  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  16574363 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 16574417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 16621117 - 16620963
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  16621117 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 16621018  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  16621017 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 16620963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 21473964 - 21474192
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| ||||||||  || || ||||| || |  || |||||||| || |||||||| |||||  | |    
T  21473964 tcggacgccgacatacggtaaggtgccatcgacaccggcttcgttctaggaacaagatcaattgcaaattcaacctccctctctggtggcacatcaggga 21474063  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||| ||  | || || || |||||| ||||||| || ||||||||| ||||||| |  ||| |||| |     
T  21474064 tctcatcaggaaaaacttccggaaattcattcacaaccggcaatctatcaatcacaacttgattctccaacgacaaatatgccatcaaggaaaacattaa 21474163  T
Q  213 aatcccatctcgttctagctgcatcatct 241  Q
     ||| |||| |||||||||||| ||||||    
T  21474164 gatctcatcacgttctagctgcttcatct 21474192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 27189809 - 27189963
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||||||||| ||||||||  |||||||||| |    
T  27189809 gacatacgataaggtgccatcgagaccggtttcgttccagggacaagatcaatagaaaactcgacttctctttctgggggtacatcaggaatctcatctg 27189908  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  27189909 gaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 27189963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 27259431 - 27259277
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||||||||| ||||||||  |||||||||| |    
T  27259431 gacatacgataaggtgccatcgagaccggtttcgttccagggacaagatcaatagaaaactcgacttctctttctgggggtacatcaggaatctcatctg 27259332  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  27259331 gaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 27259277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 22828273 - 22828148
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  ||    
T  22828273 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcagga 22828174  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    |||||||| |||||||||||||||||    
T  22828173 atctcatctggaaaaacttcaggaaa 22828148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 25114915 - 25115079
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||| ||| |||| ||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  ||    
T  25114915 ttcggaagcagacatacgatatggtgccattgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcagga 25115014  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  25115015 atctcatccggaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 25115079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 24366867 - 24366978
Alignment:
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| ||||| ||||| |||||||| ||  ||||||  || ||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  24366867 catcaggaaacacttccggaaattcattcactacaggtaacccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaat 24366966  T
Q  216 cccatctcgttc 227  Q
     ||||| |||||    
T  24366967 tccatcacgttc 24366978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 28312003 - 28312157
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || ||||| || ||||| || || || |||||  |||||||||| |    
T  28312003 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctccggaggcacatcaggaatctcatctg 28312102  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  28312103 gaaaaacttcaggaaaatcacacaccaccggtagcctatcaatcactgcttgatt 28312157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 25770214 - 25770339
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    |||||||||||||||||| ||||  |||||| ||||||||| || |||||||| || |  || |||||||| || |||||||| |||||  | |||||||    
T  25770214 gccgacatacgataaggtaccattaacaccggcttcgttccaggaactagatcaattgcaaattcaacctccctctctggtggcacatcagggatctcat 25770313  T
Q  119 ccggaaaaacttcaggaaactcattc 144  Q
    | ||||||||||| ||||| ||||||    
T  25770314 caggaaaaacttccggaaattcattc 25770339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 19867051 - 19867175
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||  | || ||||| || || |||||||| ||||| ||| | || |||||  |||    
T  19867051 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttccaagaacaagatcaatagaaaactcaacttctctctcttgaggcacatcaggaa 19867150  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  19867151 tttcatctggaaaaacttcaggaaa 19867175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 16961390 - 16961281
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| |  || ||||| || || |||||||| | ||| |||||||| |||||  |||| ||||| |    
T  16961390 gacatacgataaggtgccatcgacaccggcttcgttccagtcacaagatcaatagaaaactcaacttatctctctggtggcacatcaggaatttcatctg 16961291  T
Q  122 gaaaaacttc 131  Q
    ||||||||||    
T  16961290 gaaaaacttc 16961281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 27563750 - 27563626
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||| |||| || || ||||| || || ||||| || || || ||||| || |||||| |||    
T  27563750 tcggaagcagacatacgataaggtgccatcgacaccggcttcattccaggaacaagatcaatagaaaactcgacttccctctctggaggcacatctggaa 27563651  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | || || |||||||||||||||||    
T  27563650 tttcgtctggaaaaacttcaggaaa 27563626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 28261105 - 28260990
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  28261105 gacatacgataaggtgccatcgagaccggtttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 28261006  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||| |||||||||||    
T  28261005 gaaagacttcaggaaa 28260990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 28284811 - 28284926
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  28284811 gacatacgataaggtgccatcgagaccggtttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 28284910  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||| |||||||||||    
T  28284911 gaaagacttcaggaaa 28284926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 28339854 - 28339739
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  28339854 gacatacgataaggtgccatcgagaccggtttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 28339755  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||| |||||||||||    
T  28339754 gaaagacttcaggaaa 28339739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 21755305 - 21755420
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||||||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||| ||||  |    
T  21755305 gacatacgataaggtgtcatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatttcatatg 21755404  T
Q  122 gaaaaacttcaggaaa 137  Q
    | ||||||||||||||    
T  21755405 ggaaaacttcaggaaa 21755420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 23085682 - 23085480
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| ||||||  ||| ||||| | |||||| ||||| || ||||| || || || ||||| ||||||||||| ||  ||||  |||||||||    
T  23085682 gccgacatacggtaaggtgtcatagacacaggcttcgtacctggaacaagatcaatcgaaaattcaacttctctttctggcggcgcatcaggaatctcat 23085583  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    | |  |||||||||||||| |||  ||| ||| ||||| | || ||||| |||||||| || |  |||||  | ||||| |||||| |||||| ||| ||    
T  23085582 cagagaaaacttcaggaaaatcacacacaacttgtaacttatctatcactgcttgattctcaacagacaaggacgccatcagagaaaacatcaaaattcc 23085483  T
Q  219 atc 221  Q
    |||    
T  23085482 atc 23085480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 21676800 - 21676559
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| || |||||||| |||||||||||||| ||||||||||    
T  21676800 aactcagcaagttcggatgccgacatacaataaggtgccatcgacaccggcttcgttcctggcaccagatcgattgagaactcaacctccctttctggtg 21676701  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
     ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||  | ||||||||||| ||||||||||||||| |||||||||     
T  21676700 atacatctggaatctcatccggaaaaacttcaggaaactcgttcaccactggtaaccttccaatcacagcttggttttctaacgacaaatatgccattaa 21676601  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  21676600 agaatacatcagaatcccatctcattctagctgcttcatctc 21676559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 23078850 - 23078639
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||| |||||||||||| |||||||||||| |  || || || || || || ||||| ||||||||||| |||||  |||||||||| |    
T  23078850 gacatacggtaaggtgccatcgacaccggcttcgttcctggaataaggtcaattgaaaattccacctccctttctggtggcacatcaggaatctcatcag 23078751  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| | ||| |||||||||||  | |||||||| |||||| |||||||||||||||||||| ||||||||| |||||||||||||||  | ||    
T  23078750 gaaacacttctgaaaattcattcaccacaggcaacctgtcaatcacaacttgattttctaacgacaaatatgccattaaagaatacatcagaatttcgtc 23078651  T
Q  222 tcgttctagctg 233  Q
    ||||||||||||    
T  23078650 tcgttctagctg 23078639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 20823906 - 20824078
Alignment:
Q  52 ttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccacta 151  Q
    ||||||||||| || ||||| || ||||| ||||| |||||||||||||| |||||  |||||||||| ||||||||||| ||||| ||||||||||||     
T  20823906 ttcgttcctggaacaagatcaattgagaattcaacttctctttctggtggcacatcaggaatctcatctggaaaaacttcgggaaattcattcaccactg 20824005  T
Q  152 gtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcg 224  Q
    |||  |||||||||||||||||||| |||||||||||| ||||||| | |||| |||| ||||| ||||||||    
T  20824006 gtagtctgtcgatcacagcttgattctctaacgacaaagatgccatcaaagaaaacataagaattccatctcg 20824078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 227
Target Start/End: Complemental strand, 28892857 - 28892682
Alignment:
Q  52 ttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccacta 151  Q
    |||||||| || || ||||| || ||||||||||| || ||||||||||| |||||  |||||||||| ||||||||||||||||| ||||||||||||     
T  28892857 ttcgttcccggaacaagatcaatcgagaactcaacttccctttctggtggcacatcaggaatctcatctggaaaaacttcaggaaattcattcaccactg 28892758  T
Q  152 gtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
    |||  |||||||||||||||||||| |||||||||||  ||||||| | |||| |||| ||||| |||||||||||    
T  28892757 gtagtctgtcgatcacagcttgattctctaacgacaatgatgccatcaaagaaaacataagaattccatctcgttc 28892682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 20344705 - 20344910
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  20344705 gacatacggtatggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 20344804  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  ||||||  || ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  20344805 gaaatacttctggaaattcattcactacaggtaacccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 20344904  T
Q  222 tcgttc 227  Q
     |||||    
T  20344905 acgttc 20344910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 776 - 592
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| |||| ||||||| || || || || || || ||||||||||| || ||||| |||||| |||    
T  776 tcggacgccgacatacgataaggtgccatcgacaccggcttccttcctggaacaaggtcaattgaaaattcaacctctctctccggtggcacatctggaa 677  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| |||||||||||||| |  |||||||| ||  | |||||||| |||||| |||||||||||||||||||| |||||||    
T  676 tctcatctggaaaaacttcagggatttcattcacaaccggcaacctgtcaatcacaacttgattttctaacgacaaagatgccat 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 23564122 - 23563914
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||| |  || || || || || ||||||||||||||| |||| |||||| |||    
T  23564122 tcggacgccgacatacgataaggtgccatcgacaccggcttcgttcctggaataaggtcaattgaaaattcaacctctctttctagtggcacatctggaa 23564023  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||| ||| |||||||| ||||||||||||||||| ||| | |||||||| |||||| |||| || |||||||| ||| ||| ||| | |||| |||| ||    
T  23564022 tcttatcaggaaaaacatcaggaaactcattcacaactggcaacctgtcaatcacaacttggttctctaacgaaaaatatgtcatcaaagaaaacataag 23563923  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  23563922 aattccatc 23563914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 22505102 - 22505307
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||| | || || || || || || |||||||| || |||||||| |||||  ||||||||||      
T  22505102 gacatacggtatggtgccatcgacaccggcttcgttcctagaacgaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcac 22505201  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||| ||| ||  |||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  22505202 gaaatacttctggaaattcatgcactacaggtaacctgtcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 22505301  T
Q  222 tcgttc 227  Q
     |||||    
T  22505302 acgttc 22505307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 24796342 - 24796137
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || |||||||||||||| || |||||||| |||||  |||||||||| |    
T  24796342 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgagaactcaacctccctctctggtggcacatcaggaatctcatcag 24796243  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  24796242 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 24796143  T
Q  222 tcgttc 227  Q
     |||||    
T  24796142 acgttc 24796137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 25850498 - 25850703
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  25850498 gacatacggtatggtgccatcgacaccggcttagttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 25850597  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||  ||||| |||||||| ||  |||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||| ||| |||||    
T  25850598 gaaatacttatggaaattcattcactacaggtaacctgtcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaaaattccatc 25850697  T
Q  222 tcgttc 227  Q
     |||||    
T  25850698 acgttc 25850703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 28921683 - 28921520
Alignment:
Q  52 ttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccacta 151  Q
    |||||||| || || ||||| || ||||||||||| || ||||||||||| |||||  |||||||||| ||||||||||||||||| ||||||||||||     
T  28921683 ttcgttcccggaacaagatcaatcgagaactcaacttccctttctggtggcacatcaggaatctcatctggaaaaacttcaggaaattcattcaccactg 28921584  T
Q  152 gtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||  |||||||||||||||||||| |||||||||||  ||||||| | |||| |||| |||||    
T  28921583 gtagtctgtcgatcacagcttgattctctaacgacaatgatgccatcaaagaaaacataagaat 28921520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 14884936 - 14884731
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || |||||||||||||| || |||||||| |||||  |||||||||| |    
T  14884936 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgagaactcaacctccctctctggtggcacatcaggaatctcatcag 14884837  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || | ||||||||||||||||||||||||   |||||||| |||||||||||| || |||||    
T  14884836 ggaatacttctggaaattcattcactacaggtaaaccatcaaccacagcttgattttctaacgacaattgtgccattaaagaatacatcaggataccatc 14884737  T
Q  222 tcgttc 227  Q
     |||||    
T  14884736 acgttc 14884731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 27520847 - 27521001
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  27520847 gacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 27520946  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  27520947 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 27521001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 16358943 - 16359097
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  16358943 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 16359042  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  16359043 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 16359097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22464353 - 22464566
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    |||||||| | ||| || || ||||||||||| ||| |||||||||| |  ||||||||  | || ||||| || ||||||||||| |||||||||||||    
T  22464353 aactcggctaattcagaagcggacatacgatacggtgccatcgacactggtttcgttcccagaacaagatcaatcgagaactcaacttctctttctggtg 22464452  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||  | |||||||| |||||||||||||| || |||||||||||| ||| ||| || || ||  ||||||| |||||||||||| ||||||| |     
T  22464453 gcacatcagggatctcatctggaaaaacttcagggaattcattcaccactggtagcct-tcaattaccacttgattctctaacgacaaagatgccatcaa 22464551  T
Q  201 agaatacatcagaat 215  Q
    |||| |||| |||||    
T  22464552 agaaaacataagaat 22464566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 34568935 - 34569089
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  34568935 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 34569034  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  34569035 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 34569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 41773283 - 41773437
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  41773283 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 41773382  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  41773383 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 41773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 17267279 - 17267074
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| || |||||||| |||||  |||||||||| |    
T  17267279 gacatacggtacggtgccatcgacaccggctttgttccgggaacaaggtcaattgaaaactccacctccctctctggtggcacatcgggaatctcatcag 17267180  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || ||||||||||||||||||  ||   |||| | ||||||||| |||||| |||||| | ||||||||||||||||||||||||| |||||    
T  17267179 ggaacacctccggaaactcattcaccactgctagtttgtcaaacacagcttggttttctgacgacagatatgccattagagaatacatcagaattccatc 17267080  T
Q  222 tcgttc 227  Q
     |||||    
T  17267079 acgttc 17267074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 20778381 - 20778541
Alignment:
Q  67 agatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatca 166  Q
    ||||| || ||||||||||| |||||||||||||| |||||  |||||||||| |||||||||||  |||| |||||||||||| |||  ||||| || |    
T  20778381 agatcaatcgagaactcaacttctctttctggtggcacatcaggaatctcatctggaaaaacttcgtgaaattcattcaccactggtagtctgtcaatta 20778480  T
Q  167 cagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
    || ||||||| |||||||||||  ||||||| |  ||| |||| ||||| |||||||||||    
T  20778481 caacttgattctctaacgacaatgatgccatcaacgaaaacataagaattccatctcgttc 20778541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 22330841 - 22330678
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||| |||    
T  22330841 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatctggaa 22330742  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||| ||||||||||||||||||| |||  ||||||  ||||||| |  ||||| ||||||||    
T  22330741 tctcacccggaaaaacttcaggaaattcacacaccacaggtaacctattaatcactgcttgatt 22330678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 29474027 - 29473864
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  29474027 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 29473928  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  29473927 tctcatctggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 29473864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 40711212 - 40711375
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  40711212 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 40711311  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  | |||||||| ||||| ||||||||    
T  40711312 tctcatctggaaaaacttcaggaaattcacacaccaccgggaacctgtcaatcactgcttgatt 40711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 19772401 - 19772555
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  19772401 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 19772500  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  19772501 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 19772555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 27666435 - 27666281
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  27666435 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 27666336  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  27666335 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 27666281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 37289441 - 37289287
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  37289441 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 37289342  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  37289341 gaaaaacttcaggaaaatcacacaccaccggtaacctatcaatcactgcttgatt 37289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 22350350 - 22350514
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||| ||| |||||||||||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  ||    
T  22350350 ttcggaagcagacatacgatatggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcagga 22350449  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||| ||||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  22350450 atctcatctggaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 22350514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 27683345 - 27683191
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| |||||||||  | || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  27683345 gacatacgataaggtgccatcgagaccggcttcgttccaaggacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 27683246  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  27683245 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 27683191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 22137100 - 22137224
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||||| || ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  22137100 tcggaagcagacatacgataaggtgccatcgacatcggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 22137199  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    ||||||| |||||||||||||||||    
T  22137200 tctcatctggaaaaacttcaggaaa 22137224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 37541326 - 37541159
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  37541326 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 37541227  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaa 189  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||| |||||||    
T  37541226 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaccgacaaa 37541159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 14997684 - 14997530
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| || || || |||||   ||||||||| |    
T  14997684 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctcaggaggcacatcagaaatctcatctg 14997585  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  14997584 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 14997530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 27612786 - 27612951
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaac--ctctctttctggtggtacatctag 110  Q
    ||||| || ||||||||||||||| ||||||| |||| |||| |||| || || ||||| || || ||||||||  |||||| ||||| || |||||  |    
T  27612786 tcggaagcagacatacgataaggtgccatcgagaccggcttcattccaggaacaagatcaatagaaaactcaacttctctctctctggaggcacatcagg 27612885  T
Q  111 aatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  27612886 aatctcatctggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcaccgcttgatt 27612951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 22233874 - 22233741
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||||||||||  ||||||||||| |||| |||| || || || || || || || ||||| || || ||||||||||||||  |||    
T  22233874 tcggacgccgacatacgataaggtgtcatcgacaccgacttcattccgggaacaaggtctattgaaaattcaacttccctctctggtggtacatccggaa 22233775  T
Q  113 tctcatccggaaaaacttcaggaaactcattcac 146  Q
    ||||||| ||||||||||| ||||| ||||||||    
T  22233774 tctcatcaggaaaaacttccggaaattcattcac 22233741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 18781546 - 18781670
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||| ||||||| ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  |||    
T  18781546 tcggaagcagacatacgataaggtgccatggacaccggcttcgttccaggaacaagatcaatagaaaactcgacttccctctctggaggaacatcaggaa 18781645  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  18781646 tttcatctggaaaaacttcaggaaa 18781670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 20803029 - 20803153
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| |  || ||||| || ||||| ||||| || |||||  |||    
T  20803029 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaacagaaaactcgacttctctctctggaggcacatcaggaa 20803128  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| ||||| |||||||||||    
T  20803129 tttcatctggaaatacttcaggaaa 20803153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 21561973 - 21561783
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| ||||| ||||||||||| | |||||| ||  | || ||||| || || || ||||| || || |||||  | ||||   |||||||||    
T  21561973 gccgacatacggtaaggctccatcgacacaggcttcgtacccagaacaagatcaattgaaaattcaacttccctctctggctgcacatgaggaatctcat 21561874  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacat 209  Q
    | ||||||||||| ||||| |||||||| ||  |||| || || |||||||||||||| || | ||||||  ||||||||| |||| ||||    
T  21561873 caggaaaaacttctggaaattcattcacaaccggtaatctatcaatcacagcttgattctccaccgacaagtatgccattaaagaaaacat 21561783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 21984122 - 21983915
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||| |||||||||| | |||||| || || || ||||| || || || ||||| || || ||||  || |||||  |||||||||| |    
T  21984122 gacatacggtaaggtgccatcgacactggcttcgtacccggaacaagatcaattgaaaattcaacttccctctctgacggcacatcaggaatctcatcag 21984023  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| ||||| |||||||| ||    || || || |||| ||||||||| || | ||||||  ||||||||| |||| |||| |  ||||||||    
T  21984022 gaaaaacttctggaaattcattcacaaccgccaatctatcaatcatagcttgattctccaccgacaagtatgccattaaagaaaacattaagatcccatc 21983923  T
Q  222 tcgttcta 229  Q
     |||||||    
T  21983922 acgttcta 21983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21368 - 21609
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| || || || || || |||| ||||||||||||||    
T  21368 aactcagcaagttcggatgctgacatacgataaggtgccatcgacaccggcttcgttcctggtacaaggtcaattgaaaattcaatctctctttctggtg 21467  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||     
T  21468 gtacgtctggaatctcatccgaaaaaacttcaggaaactcattcaccactggtaacctgtcaatcacagcttggttttctaacgacaaacatgccattaa 21567  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
     |||||||||||||| ||||| |||||||||||| |||||||    
T  21568 ggaatacatcagaattccatcacgttctagctgcttcatctc 21609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 143; Significance: 3e-75; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 48294 - 48088
Alignment:
Q  8 caagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatc 107  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  48294 caagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggcaccagatcgatggagaactcaacctccctttctggtggtacatc 48195  T
Q  108 tagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatac 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||| ||||| ||||||||| |||| ||    
T  48194 tggaatctcatccggaaaaacttcaggaaactcgttcaccactggtaacctgccaatcacagcttggttttctaacaacaaatatgccattaaagaaaac 48095  T
Q  208 atcagaa 214  Q
    || ||||    
T  48094 ataagaa 48088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 53265 - 53419
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||||||  | || ||||| || || ||||| || ||||| ||| | || |||||  |||||||||| |    
T  53265 gacatacgataaggtgccatcgacaccggcttcgttccaagaacaagatcaatagaaaactcgacttctctctctagaggcacatcaggaatctcatctg 53364  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  53365 gaaaaacttcaggaaattcacacaccactggtagcttatcaatcaccgcttgatt 53419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 150
Target Start/End: Original strand, 17466 - 17603
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || |||||| |||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || ||| |  ||    
T  17466 ttcggaagcggacatatgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcaca-cagga 17564  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccact 150  Q
    |||||||| ||||||||||||||||| |||  |||||||    
T  17565 atctcatctggaaaaacttcaggaaattcacacaccact 17603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 11004 - 11051
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcc 59  Q
    |||||| || ||||||||||||||| |||||||||||| |||||||||    
T  11004 ttcggaagcggacatacgataaggtgccatcgacaccggcttcgttcc 11051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 8146 - 8360
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||| || || |||||||||||||||||||| || |||||||| |||| | ||||||    
T  8146 gatgctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcgatggagaactcaacctccctctctggtggcacatatggaatct 8245  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  8246 catcaggaaaaacttcaggaaattcattcaccactggtaacctgtcaattacagcttgattttctaacgacaaatatgccattaaagaatacatcaaaat 8345  T
Q  216 cccatctcgttctag 230  Q
     ||||| ||||||||    
T  8346 tccatcacgttctag 8360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 1177 - 1391
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||| || || |||||||||||||||||||| || |||||||| |||| | ||||||    
T  1177 gatgctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcgatggagaactcaacctccctctctggtggcacatatggaatct 1276  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||||||||||||||| |||||||||||| |||||||| | || |||||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  1277 catctggaaaaacttcaggaaattcattcaccactggtaacctgccaattacagcttgattttctaacgacaaatatgccattaaagaatacatcaaaat 1376  T
Q  216 cccatctcgttctag 230  Q
     ||||| ||||||||    
T  1377 tccatcacgttctag 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 79603 - 79389
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| |||||||||||| || |||||||||||| |||||||||||| || || |||||||||||||||||||| || |||||||| |||||| ||||||    
T  79603 gatgctgacatacgataatgtgccatcgacaccggcttcgttcctggaacaaggtcgatggagaactcaacctccctctctggtggcacatctggaatct 79504  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||||||||||||||||||||| |||||||||||| ||||||| || |||||||||||||||||||| |||||| ||||||||| ||||||||||| |||    
T  79503 catccggaaaaacttcaggaaattcattcaccactggtaacctatcaatcacagcttgattttctaatgacaaatatgccattaaagaatacatcaaaat 79404  T
Q  216 cccatctcgttctag 230  Q
     ||||| ||||||||    
T  79403 tccatcacgttctag 79389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 60268 - 60401
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| || |||||||| ||||   |||    
T  60268 tcggacgccgacatacgataaggtgccatcgacaccggcttcgttccgggcacaagatcgattgaaaattcaacctccctctctggtggcacataaggaa 60367  T
Q  113 tctcatccggaaaaacttcaggaaactcattcac 146  Q
    ||||||| ||||||||||| ||||| ||||||||    
T  60368 tctcatcaggaaaaacttccggaaattcattcac 60401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 16154351 - 16154585
Alignment:
Q  7 gcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| |||| |||||| ||||    
T  16154351 gcaagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctttatggtggcacat 16154450  T
Q  107 ctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaata 206  Q
    || |||||||||| |||||||||||||||||||| ||||| ||| |||||||||| || || ||||||||||||||||||||| ||||||||| ||||||    
T  16154451 ctggaatctcatcaggaaaaacttcaggaaactcgttcacaactggtaacctgtcaattaccgcttgattttctaacgacaaatatgccattaaagaata 16154550  T
Q  207 catcagaatcccatctcgttctagctgcatcatct 241  Q
    || |||||| ||||| |||||||||||| ||||||    
T  16154551 caccagaattccatcacgttctagctgcttcatct 16154585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 16150205 - 16150439
Alignment:
Q  7 gcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || | |||||| ||||    
T  16150205 gcaagttcggatgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctatatggtggcacat 16150304  T
Q  107 ctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaata 206  Q
    || |||||||||| |||||||||||||||||||| ||||| ||| |||||||||| || || ||||||||||||||||||||| ||||||||| ||||||    
T  16150305 ctggaatctcatcaggaaaaacttcaggaaactcgttcacaactggtaacctgtcaattaccgcttgattttctaacgacaaatatgccattaaagaata 16150404  T
Q  207 catcagaatcccatctcgttctagctgcatcatct 241  Q
    || |||||| ||||| |||||||||||| ||||||    
T  16150405 caccagaattccatcacgttctagctgcttcatct 16150439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 1647040 - 1646828
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| || || ||||| || ||||||||||| || |||||||| || |||||  |||||||||| |    
T  1647040 gacatacgataaggtgccatcgacaccggcttcgttcccgggacaagatcaatcgagaactcaacttccctttctggcggcacatcaggaatctcatctg 1646941  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||||||||| |||||||||||| |||||||||| || ||||||||||| |||||||||| | ||||||| | |||| |||||||||| |||||    
T  1646940 gaaaaacttcaggaaattcattcaccactggtaacctgtcaattacagcttgattctctaacgacagagatgccatcaaagaaaacatcagaattccatc 1646841  T
Q  222 tcgttctagctgc 234  Q
    ||| |||| ||||    
T  1646840 tcgctctaactgc 1646828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 11204995 - 11204790
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||   ||||||||| |    
T  11204995 gacatacggtatggtgccatcgacaccggcttcgttcctggaacaagctcaattgaaaattcaacctccctctctggtggcacatcagaaatctcatcag 11204896  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  |||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  11204895 gaaatacttctggaaattcattcactacaggtaacctgtccatcacagcttgattttctaacgacaattatgccattagagaatacatcagaattccatc 11204796  T
Q  222 tcgttc 227  Q
     |||||    
T  11204795 acgttc 11204790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27902873 - 27903097
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    |||||||| | ||| || || ||||| ||||| ||| ||||||||||||  |||||||| || |  ||||| || ||||||||||| || |||| |||||    
T  27902873 aactcggctaattcagaagctgacatgcgatatggtgccatcgacaccggtttcgttcccggaataagatcaatcgagaactcaacttccctttttggtg 27902972  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||  |||||||||||||||||||||||||||| |||||||||||  |||||||||| || ||||||||||| |||||||||||| ||||||| |     
T  27902973 gcacatcaggaatctcatccggaaaaacttcaggaaattcattcaccacgggtaacctgtcaattacagcttgattctctaacgacaaagatgccatcaa 27903072  T
Q  201 agaatacatcagaatcccatctcgt 225  Q
    |||| |||| |||||  ||||||||    
T  27903073 agaaaacataagaatttcatctcgt 27903097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 15356892 - 15356684
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||| ||||||| |||||||||||| || || || || || || |||||||| ||||||||||| |||||| |||    
T  15356892 tcggacgccgacatacgataaggtgccattgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggcacatctggaa 15356793  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| |  || |||||||| ||| | |||||||| || ||||||| |||||| || |||||  ||||||| | |||| |||| ||    
T  15356792 tctcatcaggaaaaacttccgagaattcattcacaactggcaacctgtcaattacagcttaattttccaatgacaagtatgccatcaaagaaaacataag 15356693  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  15356692 aattccatc 15356684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 51604555 - 51604348
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| |||||||| || |||||  |||||||||| |    
T  51604555 gacatacggtacggtgccatcgacaccggctttgttccgggaacaaggtcaattgaaaactccacctccctttctggcggcacatcaggaatctcatcag 51604456  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || ||||||||||||||||||  || | |||| ||||||||||| ||||||||||||| | |||||||||||||| |||||||||| |||||    
T  51604455 ggaacacctccggaaactcattcaccactgctagcttgtcaatcacagcttggttttctaacgacagatatgccattagagaaaacatcagaattccatc 51604356  T
Q  222 tcgttcta 229  Q
     |||||||    
T  51604355 acgttcta 51604348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 3262557 - 3262352
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  3262557 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 3262458  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  3262457 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 3262358  T
Q  222 tcgttc 227  Q
     |||||    
T  3262357 acgttc 3262352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 29451300 - 29451095
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || |||  ||||||||||| ||| |||||||| || ||||| || || || |||||||| |  |||||||| |||||  |||||||||| |    
T  29451300 gacatacggtacggtgtcatcgacaccggctttgttcctggaacaagatcaattgaaaattcaacctcccgctctggtggcacatcaggaatctcatcag 29451201  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  ||||||  || ||||||||||||||||||||||||||   |||||||||||||||||||| ||| |||||    
T  29451200 gaaacacttccggaaattcattcactacaggtaacccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaaaattccatc 29451101  T
Q  222 tcgttc 227  Q
     |||||    
T  29451100 acgttc 29451095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 44659613 - 44659430
Alignment:
Q  38 ccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    |||||||||||| ||| |||||||| || || || || || || ||||| || || |||||||| |||||  |||||||||| ||||| ||||| |||||    
T  44659613 ccatcgacaccggcttagttcctggaacaaggtcaattgaaaattcaacttccctctctggtggcacatcaggaatctcatcaggaaacacttccggaaa 44659514  T
Q  138 ctcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
     |||||||| ||  ||||||  || ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  44659513 ttcattcactacaggtaacccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 44659430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 20892540 - 20892745
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  20892540 gacatacggtatggtgccatcgacaccggctttgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 20892639  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||  || ||||||||||| ||  |||||||| | |||||||||||||||||||  || ||| | ||||| |||||||||||||||||||| ||    
T  20892640 gaaacacttttgggaactcattcactacaggtaacctgccaatcacagcttgattttctacggataaataagccatcagagaatacatcagaatcccgtc 20892739  T
Q  222 tcgttc 227  Q
     |||||    
T  20892740 ccgttc 20892745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 16234504 - 16234341
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  16234504 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 16234405  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  16234404 tctcatctggaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 16234341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 12479109 - 12479263
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  12479109 gacatacgataaggtaccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 12479208  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  12479209 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 12479263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 14301491 - 14301328
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  14301491 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 14301392  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  14301391 tctcatctggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 14301328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 19634636 - 19634799
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  19634636 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 19634735  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  19634736 tctcatctggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 19634799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 8051126 - 8050972
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  8051126 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 8051027  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  8051026 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 8050972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 8388921 - 8389075
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  8388921 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 8389020  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  8389021 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 8389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 15258427 - 15258629
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || || ||||| |||||| |||    
T  15258427 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctccggtgggacatctggaa 15258526  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| || || ||||||||   | | ||||| ||  |||||||||||||||| || |||||  ||||||| | |||| |||| ||    
T  15258527 tctcatcaggaaaaacttctgggaattcattcacacattgcaacctatcattcacagcttgattttccaaggacaagtatgccatcaaagaaaacataag 15258626  T
Q  213 aat 215  Q
    |||    
T  15258627 aat 15258629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 17092652 - 17092498
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  |||||||||| |    
T  17092652 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatctg 17092553  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  17092552 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 17092498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 19776296 - 19776142
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  19776296 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 19776197  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  19776196 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 19776142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 27713845 - 27713999
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  27713845 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 27713944  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  27713945 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 27713999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 23958256 - 23958410
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  23958256 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 23958355  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  23958356 gaaaaacttcaggaaattcacacaccaccggtaccctatcaatcactgcttgatt 23958410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 15072859 - 15072992
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || || |||||||| ||  ||||||||| |||  |||    
T  15072859 tcggacgctgacatacgataaggtgccatcgacaccggcttcgttccggggacaagatcaatcgaaaattcaacctccctccctggtggtatatcgggaa 15072958  T
Q  113 tctcatccggaaaaacttcaggaaactcattcac 146  Q
    ||||||| ||||||||||| ||||| ||||||||    
T  15072959 tctcatcaggaaaaacttctggaaattcattcac 15072992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 40475540 - 40475703
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||    
T  40475540 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaa 40475639  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||||||||| |||  ||||||  ||||||| || ||| | ||||||||    
T  40475640 tctcatctggaaaaacttcaggaaattcacacaccaccggtaacctatcaatccctgcttgatt 40475703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 14683066 - 14683191
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| || || ||||| || |||||  ||    
T  14683066 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacatcagga 14683165  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||| |||||||||| ||||||    
T  14683166 atttcatctggaaaaactttaggaaa 14683191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 16251362 - 16251238
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||  ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  |||    
T  16251362 tcggaagcagacatacgataaggtgccatcgacacctgcttcgttccaggaacaagatcaatagaaaactcgacttccctctctggaggcacatcaggaa 16251263  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  16251262 tttcatctggaaaaacttcaggaaa 16251238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 16353042 - 16352918
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||| | ||||||||| || || |||||  | || ||||| || ||||| ||||| || |||||  |||    
T  16353042 tcggaagcagacatacgataaggtgccatcgacactggcttcgttccaggaacaagatcattagaaaactcgacttctctctctggaggcacatcaggaa 16352943  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  16352942 tttcatctggaaaaacttcaggaaa 16352918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 15145405 - 15145281
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||| ||||||| |||| ||||  | || ||||| || || |||| ||| ||||| ||| | ||||||||  |||    
T  15145405 tcggaagctgacatacgataaggtgccatagacaccggcttcattccaagaacaagatcaatagaaaacttaacttctctctctagaggtacatcaggaa 15145306  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  15145305 tttcatctggaaaaacttcaggaaa 15145281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 18224949 - 18224834
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||  ||||||||| || || ||||| || || |||||||| || || ||||| || ||||   |||| ||||| |    
T  18224949 gacatacgataaggtgccatcgataccaacttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacattaggaatttcatctg 18224850  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  18224849 gaaaaacttcaggaaa 18224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 15001137 - 15001048
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggt 102  Q
    ||||| |||||||||||||||||| || ||||||||| |||||||||| | || || || || || || |||||||| || |||||||||    
T  15001137 tcggacgccgacatacgataaggtgccttcgacaccggcttcgttcctagaacaaggtcaattgaaaattcaacctccctctctggtggt 15001048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 14994056 - 14993956
Alignment:
Q  97 ggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgcca 196  Q
    ||||| |||||| |||||||||| ||||||||||| ||||| | |||||  ||  | ||||| || |||||||||||||| || || |||||  ||||||    
T  14994056 ggtggcacatctggaatctcatcaggaaaaacttctggaaatttattcataaccggcaacctatcaatcacagcttgattctccaatgacaagaatgcca 14993957  T
Q  197 t 197  Q
    |    
T  14993956 t 14993956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 39590 - 39804
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||| ||| |||||||||||| |||||||||||| || || |||||||||||||||||||| || |||||||| |||||| ||||||    
T  39590 gatgctgacatacgatatggtgccatcgacaccgacttcgttcctggaacaaggtcgatggagaactcaacctccctctctggtggcacatctggaatct 39689  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    ||||| |||||||||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||| |||    
T  39690 catcctgaaaaacttcaggaaattcattcaccactggtaacctatcaatcacagcttgattttctaacgacaaatttgccattaaagaatacatcaaaat 39789  T
Q  216 cccatctcgttctag 230  Q
     ||||| ||||||||    
T  39790 tccatcacgttctag 39804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 22408 - 22481
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctc 89  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||| || || ||||||||||||||||||||    
T  22408 gatgctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcgatggagaactcaacctc 22481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20833756 - 20833536
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||| || |||||||||||||||| | |||||||||||| ||||||||| || || || || || || ||||||||||| || |||||||    
T  20833756 aactcagcaagttcagacgccgacatacgataagatgccatcgacaccggcttcgttcccggaacaaggtcaattgaaaactcaacctccctctctggtg 20833657  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |     
T  20833656 gtacatctggaatctcatccgaaaaaacttcaggaaactcattcaccactagtaacctgtcaatcacagcttgattttctaacgacaaagatgccatcaa 20833557  T
Q  201 agaatacatcagaatcccatc 221  Q
    |||| |||| ||||| |||||    
T  20833556 agaaaacataagaattccatc 20833536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 24097450 - 24097239
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||| |||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  24097450 gacatacgataaggtgccatcgacaccggctttgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 24097351  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||  ||||| |||||||||||| | |||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  24097350 gaaacacttatggaaattcattcaccactggcaacctgtcaatcaaagcttgattttctaacgacaaatatgccattaaagaatacatcagaattccatc 24097251  T
Q  222 tcgttctagctg 233  Q
     |||||||||||    
T  24097250 acgttctagctg 24097239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 19856814 - 19857022
Alignment:
Q  7 gcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    |||||||| || |||||||||||||||||| |||||||||||| |||||||| ||| || || || || || || ||||||||||| |||||||| ||||    
T  19856814 gcaagttcagacgccgacatacgataaggtgccatcgacaccggcttcgttcttggaacaaggtcaattgaaaattcaacctctctctctggtggcacat 19856913  T
Q  107 ctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaata 206  Q
    || ||||||||||||||||||| | ||||||||||||||| ||| | |||||||| |||| ||||||||| |||||||||||| ||||| ||| |||| |    
T  19856914 ctggaatctcatccggaaaaacatgaggaaactcattcacaactggcaacctgtcaatcatagcttgattctctaacgacaaatatgcctttaaagaaaa 19857013  T
Q  207 catcagaat 215  Q
    ||| |||||    
T  19857014 cataagaat 19857022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20854616 - 20854390
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    |||||||| | ||| || || ||||| ||||| ||| |||||||||| |  |||||||| || || ||||| || ||||||||||| |||||||||||||    
T  20854616 aactcggctaattcagaagctgacatgcgatacggtgccatcgacactggtttcgttcccggaacaagatcaatcgagaactcaacttctctttctggtg 20854517  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||  |||||||||| |||||||||||||| || |||||||||||| ||| |||||| || ||||||||||| |||||||||||| ||||||| |     
T  20854516 gcacatcaggaatctcatctggaaaaacttcagggaattcattcaccactggtagcctgtcaattacagcttgattctctaacgacaaagatgccatcaa 20854417  T
Q  201 agaatacatcagaatcccatctcgttc 227  Q
    |||| |||| ||||| |||||||||||    
T  20854416 agaaaacataagaattccatctcgttc 20854390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 21953433 - 21953626
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || || || || || || |||||||| || ||| |||| |||||  |||||||||| |    
T  21953433 gacatacggtatggtgccatcgacaccggctttgttcctggaacaaggtcaattgaaaattcaacctccctatctagtggcacatcaggaatctcatcag 21953532  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| ||||| |||||||| ||  |||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  21953533 gaaacacttccggaaattcattcactacaggtaacctgtcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaat 21953626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 31537832 - 31537627
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  31537832 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 31537733  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  31537732 gaaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaataccatc 31537633  T
Q  222 tcgttc 227  Q
     |||||    
T  31537632 acgttc 31537627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 227
Target Start/End: Original strand, 20296952 - 20297141
Alignment:
Q  38 ccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    |||||||||||| |||||||||||| || || || || || || |||||||| || | |||||| |||||  |||||||||| ||||| ||||  |||||    
T  20296952 ccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctttggtggcacatcaggaatctcatcaggaaatacttttggaaa 20297051  T
Q  138 ctcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
     |||||||| ||  ||||||| || ||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||    
T  20297052 ttcattcactacaggtaacctatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatcacgttc 20297141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 22016589 - 22016423
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| | |||||||||| |||||||||||| || || || || || || ||||| || || |||||||| |||||| |||    
T  22016589 tcggacgccgacatacgataaggtgctatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacgtccctctctggtggcacatctggaa 22016490  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttc 179  Q
    ||||||| ||||||||||  ||||| |||||||| ||| | |||||||| |||||||||||||||||    
T  22016489 tctcatcaggaaaaacttatggaaattcattcacaactggcaacctgtcaatcacagcttgattttc 22016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 38910661 - 38910456
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  38910661 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 38910562  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||  ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  38910561 gaaatacttatggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 38910462  T
Q  222 tcgttc 227  Q
     |||||    
T  38910461 acgttc 38910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 41311072 - 41311293
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||| ||||||| ||||||||| || || |||||||| || || | |||||| || |||||||| |||||| |||    
T  41311072 tcggacgccgacatacgataaggtgccatggacaccggcttcgttccaggcacaagatcgattgaaaatttaacctccctctctggtggcacatctggaa 41311171  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| ||| |||| ||  |||| || || |||||||||||||| || ||||||||  | ||||| | |||| |||| |     
T  41311172 tctcatcaggaaaaacttctggaaattcactcacaaccggtaatctatcaatcacagcttgattctccaacgacaagtacgccatcaaagaaaacattat 41311271  T
Q  213 aatcccatctcgttctagctgc 234  Q
    ||| ||||| ||||||| ||||    
T  41311272 aattccatcacgttctaactgc 41311293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 48425428 - 48425633
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  48425428 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 48425527  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  48425528 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 48425627  T
Q  222 tcgttc 227  Q
     |||||    
T  48425628 acgttc 48425633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 52988296 - 52988501
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  52988296 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 52988395  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  52988396 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 52988495  T
Q  222 tcgttc 227  Q
     |||||    
T  52988496 acgttc 52988501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 37679604 - 37679809
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  37679604 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 37679703  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  |||| |  || |||||| |||||||||||||||||||    ||||||||||||||||||||| | |||||    
T  37679704 gaaacacttctggaaattcattcactacaggtaaaccatcaatcacaacttgattttctaacgacaattgcgccattagagaatacatcagagtaccatc 37679803  T
Q  222 tcgttc 227  Q
     |||||    
T  37679804 acgttc 37679809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 21739871 - 21739672
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| || |||||||| |||||| |||||||||| |    
T  21739871 gacatacggtaaggtgccatcgacaccggcttcgttccgggaacaagatcgatagaaaattcaacctccctctctggtggcacatctggaatctcatcag 21739772  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| ||||| |||||||| ||  | ||  | || |||||||||||||| || || |||||  ||||||| | |||| |||| ||||| |||||    
T  21739771 gaaaaacttccggaaattcattcacaaccggcaatttatcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacattagaattccatc 21739672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 21832826 - 21832980
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  21832826 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 21832925  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  21832926 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 21832980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 21743396 - 21743212
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| ||||||||| || |  |||||||| || || ||||||| ||| |||||||| |||||| |||    
T  21743396 tcggacgccgacatacggtaaggtgccatcgacaccggcttcgttccgggcataagatcgattgaaaattcaacctttctctctggtggcacatctggaa 21743297  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||  ||||||||||| ||||| ||| |||| ||  | || || || |||||||||||||| || || |||||  |||||||    
T  21743296 tctcatgaggaaaaacttctggaaattcactcacaaccggaaatctatcaatcacagcttgattctccaatgacaactatgccat 21743212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 33388864 - 33388710
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  33388864 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 33388765  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || |||||  |||||||    
T  33388764 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactccttgatt 33388710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 16348439 - 16348315
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  16348439 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 16348340  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    ||||||| |||||||||||||||||    
T  16348339 tctcatctggaaaaacttcaggaaa 16348315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 21839465 - 21839589
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  21839465 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 21839564  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    ||||||| |||||||||||||||||    
T  21839565 tctcatctggaaaaacttcaggaaa 21839589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 51331327 - 51331176
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  51331327 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 51331228  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttg 173  Q
    ||||||||||||| || |||  ||||||  | |||||||| ||||| |||||    
T  51331227 gaaaaacttcagggaattcacacaccaccggcaacctgtcaatcactgcttg 51331176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 41351503 - 41351349
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  41351503 gacatacgataaggtgccatcgagaccggtttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 41351404  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  41351403 gaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 41351349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 19108892 - 19109007
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| || || ||||  || || ||||| || || |||||||| || |||||  |||| ||||| |    
T  19108892 gacatacgataaggtgccatcgacaccggcttcgttccaggaacaagattaatagaaaactcgacttccctttctggaggcacatcaggaatttcatctg 19108991  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  19108992 gaaaaacttcaggaaa 19109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 17042849 - 17042735
Alignment:
Q  23 acatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccgg 122  Q
    |||||||||||||| |||||||||||| ||||||||| || || ||||| || || || || || || |||||||| || |||||  |||| ||||| ||    
T  17042849 acatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaattcgacttccctttctggaggcacatcaggaatttcatctgg 17042750  T
Q  123 aaaaacttcaggaaa 137  Q
    |||||||||||||||    
T  17042749 aaaaacttcaggaaa 17042735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 12200214 - 12200278
Alignment:
Q  163 atcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||| || ||||| |||||    
T  12200214 atcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatcacgttc 12200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 22503124 - 22503013
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||||||  | || ||||| || || |||||||| ||||| ||||  || |||||  |||| ||||| |    
T  22503124 gacatacgataaggtgccatcgacaccggcttcgttccaagaacaagatcaatagaaaactcaacttctctctctgaaggcacatcaggaatttcatctg 22503025  T
Q  122 gaaaaacttcag 133  Q
    ||||||||||||    
T  22503024 gaaaaacttcag 22503013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 21233575 - 21233451
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||| | |||||||||||| ||||||||| || || ||||| || || ||||| || || || ||| | || |||||  |||    
T  21233575 tcggaagcagacatacgataagatgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttccctctctagaggcacatcaggaa 21233476  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  21233475 tttcatctggaaaaacttcaggaaa 21233451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 21751461 - 21751576
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| |||||   ||||||||| || || ||||| || || || ||||| ||||||||||| || ||||| ||||| ||||| |    
T  21751461 gacatacgataaggtgtcatagacacaagcttcgttccaggaacaagatcaatagaaaattcaacttctctttctggaggcacatcaagaatttcatcag 21751560  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||||||| |||||    
T  21751561 gaaaaacttctggaaa 21751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 429951 - 429836
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| ||||| | ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||| ||||| |    
T  429951 gacatacgataaggtgtcatagacacaggcttcgttccaggaacaagatcaatcgaaaactcaacttctctctctggaggcacatcaggaatttcatcag 429852  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||| ||| |||||    
T  429851 gaaaaatttctggaaa 429836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 20140607 - 20140722
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| ||||  | ||||||||| || || |||||||| || || ||||| ||||| ||||| || |||||  |||| ||||| |    
T  20140607 gacatacgataaggtgtcatggacataggcttcgttccaggaacaagatcgatcgaaaattcaacttctctctctggaggcacatcaggaatttcatctg 20140706  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||||||| |||||    
T  20140707 gaaaaacttctggaaa 20140722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 18255 - 18038
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||| ||||| | |||||||||||| |||||||||||| || || |||||||||||||||||||| || |||||||| |||||| ||||||    
T  18255 gatgctgacatacaataagttgccatcgacaccggcttcgttcctgggacaaggtcgatggagaactcaacctccctctctggtggcacatctggaatct 18156  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||  |||| |||| ||| |||||||||||    
T  18155 catccggaaatacttcaggaaattcattcaccactggtaacctgtcaatcacaacttgattttctaacgacaagtatgctattaaagagtacatcagaat 18056  T
Q  216 cccatctcgttctagctg 233  Q
    |||||| | |||||||||    
T  18055 cccatcactttctagctg 18038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 5621 - 5410
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||| ||| |||||||||||| |||||||||||| || || |||||||||||||||||||| || |||||||| |||||| ||||||    
T  5621 gatgctgacatacgatatggtgccatcgacaccggcttcgttcctggaacaaggtcgatggagaactcaacctccctctctggtggcacatctggaatct 5522  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    || ||| ||||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||| |||    
T  5521 cacccgaaaaaacttcaggaaattcattcaccactgataacctgtcaatcacagcttgattttctaatgacaaatatgccattaaagaatacatcaaaat 5422  T
Q  216 cccatctcgttc 227  Q
     ||||| |||||    
T  5421 tccatcacgttc 5410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 9248 - 9019
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| ||||||| ||| |||||||||||||||||| |||||||||||| |||||||||||| || |  || || || || ||||||||||| || ||||    
T  9248 aactcagcaagttaggacgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaacgtcaattgaaaattcaacctctctctccggtg 9149  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||     
T  9148 gcacatctggaatctcgtcaggaaaaacttcaggaaattcattcaccactagtaacctgtcaatcacagcttgattctctaacgacaaatatgccattaa 9049  T
Q  201 agaatacatcagaatcccatctcgttctag 230  Q
    ||||||||||||||  ||||| ||||||||    
T  9048 agaatacatcagaaatccatcacgttctag 9019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 19462 - 19233
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| ||||||| ||| |||||||||||||||||| |||||||||||| |||||||||||| || |  || || || || ||||||||||| || ||||    
T  19462 aactcagcaagttaggacgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaacgtcaattgaaaattcaacctctctctccggtg 19363  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||     
T  19362 gcacatctggaatctcgtcaggaaaaacttcaggaaattcattcaccactagtaacctgtcaatcacagcttgattctctaacgacaaatatgccattaa 19263  T
Q  201 agaatacatcagaatcccatctcgttctag 230  Q
    ||||||||||||||  ||||| ||||||||    
T  19262 agaatacatcagaaatccatcacgttctag 19233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 31464 - 31223
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| || || || || || || ||||||||||| |||||||    
T  31464 aactcagcaagttcggatgccgacatacgataaggtgccatcgacaccggcttagttcctggaacaaggtcaattgaaaattcaacctctctctctggtg 31365  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||  |||||||||| ||||| || ||||| || |||||||| ||  ||||||| || | ||||||||| ||||||||||||||| |||||||||     
T  31364 gcacatcaggaatctcatcaggaaacacatcagggaattcattcactacaggtaacctatcaaccacagcttggttttctaacgacaaatatgccattaa 31265  T
Q  201 agaatacatcagaatcccatctcgttctagctgcatcatctc 242  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  31264 agaatacatcagaatcccatctctttctagctgcttcatctc 31223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 54095 - 53981
Alignment:
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| ||||| ||||| ||||||||||||   |||||||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  54095 catcaggaaacacttctggaaattcattcaccactgacaacctgtcaatcacagcttgattttctaacgacaaatatgccatttaagaatacatcagaat 53996  T
Q  216 cccatctcgttctag 230  Q
     ||||| ||||||||    
T  53995 tccatcacgttctag 53981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 22028486 - 22028278
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| || || || || || |||||||||||||| || ||| ||||||||| | |||||||||||     
T  22028486 gacatacgataaggtgccatcgacaccggcttcgttcccggaacaaggtcaattgagaactcaacctccctctctagtggtacatttggaatctcatcca 22028387  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||| |||| ||||||||||||||| ||||||||| ||||| ||||||||| |||||    
T  22028386 gaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacaacttggttttctaacgacaaatatgccattaaagaatgcatcagaattccatc 22028287  T
Q  222 tcgttctag 230  Q
     ||||||||    
T  22028286 acgttctag 22028278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 16269430 - 16269225
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||||| || || || || || || ||||||||||| |||||||| |||||  |||||||||| |    
T  16269430 gacatacggtatggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctctctctctggtggcacatcaggaatctcatcag 16269331  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  |||||||||| |||||| |||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  16269330 gaaatacttctggaaattcattcactacaggtaacctgtcaatcacaacttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 16269231  T
Q  222 tcgttc 227  Q
     |||||    
T  16269230 acgttc 16269225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 21323494 - 21323310
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| |||||||||||| |||||||| ||| || || || || || || |||||||| || |||||||| |||||| |||    
T  21323494 tcggaagctgacatacggtaaggtgccatcgacaccggcttcgttcatggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 21323395  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| ||||||||||| ||||| |||||||| ||  | ||||| || ||||||||||||||||||||||||||| |||||||    
T  21323394 tctcatcaggaaaaacttctggaaattcattcacaaccggcaacctatcaatcacagcttgattttctaacgacaaagatgccat 21323310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 28983486 - 28983691
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || ||||| |||||||| || |||||||| |||||  |||| ||||| |    
T  28983486 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgagaattcaacctccctctctggtggcacatcaggaatttcatcag 28983585  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | |||||||| |||||||||||||| ||  |||| |  || | ||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  28983586 ggaaaacttctggaaactcattcactacaggtaaaccatcaaccacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 28983685  T
Q  222 tcgttc 227  Q
     |||||    
T  28983686 acgttc 28983691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 28988705 - 28988910
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || ||||| |||||||| || |||||||| |||||  |||| ||||| |    
T  28988705 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgagaattcaacctccctctctggtggcacatcaggaatttcatcag 28988804  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | |||||||| |||||||||||||| ||  |||| |  || | ||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  28988805 ggaaaacttctggaaactcattcactacaggtaaaccatcaaccacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 28988904  T
Q  222 tcgttc 227  Q
     |||||    
T  28988905 acgttc 28988910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 31569049 - 31568832
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| || ||||| || |||||  |||||||||| |    
T  31569049 gacatacggtacggtgccatcgacaccggctttgttccaggaacaaggtcaattgaaaactccacctccctctctggcggcacatcaggaatctcatcag 31568950  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || |||||||||||||||||   || | |||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||    
T  31568949 ggaacacctccggaaactcattcaccaccgctagcttgtcaatcacagcttgattttctaacgacagatatgccattagagaaaacatcagaattccatc 31568850  T
Q  222 tcgttctagctgcatcat 239  Q
     ||||||| |||| ||||    
T  31568849 acgttctaactgcttcat 31568832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 22053437 - 22053649
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||||| || |||||||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  22053437 gacatacgataaggtgccatcgacatcggcttcgttcctgggacaaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 22053536  T
Q  122 gaaaaacttcaggaaactcattcacca-ctagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccat 220  Q
    |||| ||||| ||||| |||||||| | |  ||||||| || |||| ||||||||||||||  || ||| | | ||| ||||||||||||| |||||| |    
T  22053537 gaaacacttctggaaattcattcacaaccgggtaacctatcaatcatagcttgattttctacagataaataagtcatcagagaatacatcaaaatcccgt 22053636  T
Q  221 ctcgttctagctg 233  Q
    | |||||||||||    
T  22053637 cccgttctagctg 22053649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 31414648 - 31414528
Alignment:
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatca 211  Q
    |||||||| || || ||||| ||||| |||||||||||| | ||||| || ||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  31414648 atctcatcagggaacacttctggaaattcattcaccactggcaacctatcaatctcagcttgattttctaacgacaaatatgccattaaagaatacatca 31414549  T
Q  212 gaatcccatctcgttctagct 232  Q
    |||| ||||| ||||||||||    
T  31414548 gaattccatcacgttctagct 31414528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 19984746 - 19984932
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||  |||||| |||||||||||| ||||||||| || || ||||| || || || |||||||| || |||||||| |||||  |||    
T  19984746 tcggacgccgacatacagtaaggtgccatcgacaccggcttcgttccgggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaa 19984845  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccatta 199  Q
    ||||||| ||||||||||| ||||| |||||||| ||| | || || || |||||| ||||||| || ||||||||  |||||||||    
T  19984846 tctcatcaggaaaaacttctggaaattcattcacaactggcaatctatcaatcacaacttgattctccaacgacaagtatgccatta 19984932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 21927994 - 21928215
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||  || || ||||| || || || | |||||| || |||||||| |||||  |||    
T  21927994 tcggacgccgacatacgataaggtgccatcgacaccggcttcgttctgggaacaagatcaattgaaaatttaacctccctctctggtggcacatcaggaa 21928093  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||  ||||||||||| ||||| |||||||| ||  | || || || |||||||||||||| || || |||||  ||||||| | |||| |||| |     
T  21928094 tctcattaggaaaaacttctggaaattcattcacaaccggaaatctatcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacattaa 21928193  T
Q  213 aatcccatctcgttctagctgc 234  Q
    ||||||||| ||||||| ||||    
T  21928194 aatcccatcacgttctaactgc 21928215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 27357111 - 27357316
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||||| |||||||| | |||||||||||| || || || || || || |||||||| || | |||||| ||||   |||||||||| |    
T  27357111 gacatacggtatggttctatcgacactggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctatggtggcacataaggaatctcatcag 27357210  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| | ||| |||| ||| ||  ||||||   | ||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||    
T  27357211 gaaaaacttctgaaaattcatacactacaggtaaccaaacaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaatcccgtc 27357310  T
Q  222 tcgttc 227  Q
     |||||    
T  27357311 ccgttc 27357316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 19114975 - 19115129
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||  || || ||||| || || || ||||| ||||| ||||| || |||||  |||||||||| |    
T  19114975 gacatacgataaggtgccatcgagaccggcttcgttctaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatctg 19115074  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  19115075 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 19115129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 20016469 - 20016315
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  20016469 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 20016370  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||||||| |||| |||  ||||||  ||||||| || ||||| ||||||||    
T  20016369 gaaaaacttcaagaaattcacacaccaccggtaacctatcaatcaccgcttgatt 20016315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 17672229 - 17672074
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcct-ggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatcc 120  Q
    ||||||||||||||| ||||||| |||| |||||||||  || || ||||| || || |||||||| ||||| ||||| || |||||  ||||||||||     
T  17672229 gacatacgataaggtgccatcgagaccggcttcgttccaaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatct 17672130  T
Q  121 ggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  17672129 ggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 17672074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 22118390 - 22118227
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| | ||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  22118390 tcggaagcagacatacgataaggtgcgatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 22118291  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||| ||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  22118290 tctcatctggaaagacttcaggaaaatcacacaccaccggtaacctatcaatcactgcttgatt 22118227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 18859152 - 18859267
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||  || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  18859152 gacatacgataaggtgccatcgagaccggcttcgttctaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 18859251  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  18859252 gaaaaacttcaggaaa 18859267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 22127162 - 22127011
Alignment:
Q  25 atacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaa 124  Q
    |||||||||||| | ||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| ||||    
T  22127162 atacgataaggtgcgatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctggaa 22127063  T
Q  125 aaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    | ||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  22127062 agacttcaggaaaatcacacaccaccggtaacctatcaatcactgcttgatt 22127011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 19482278 - 19482124
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| ||||  |||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  19482278 gacatacgataaggtgccatcgagaccggtttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 19482179  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  19482178 gaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 19482124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 15535949 - 15536073
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||| ||| |||||||||||| ||||||||| || || ||||| || || ||||| || || |||||||| || |||||  |||    
T  15535949 tcggaagcagacatacgatatggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttccctttctggaggcacatcaggaa 15536048  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  15536049 tttcatctggaaaaacttcaggaaa 15536073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 30311359 - 30311235
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || |||||||| || || ||||| || |||||  |||    
T  30311359 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcaacttccctctctggaggcacatcaggaa 30311260  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| ||||||||||| |||||    
T  30311259 tttcatctggaaaaacttcgggaaa 30311235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 19980533 - 19980657
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||| | ||||||||| || || |||||  | || |||||||| ||||| ||||| |  |||||  |||    
T  19980533 tcggaagctgacatacgataaggtgccatcgacacgggcttcgttccaggaacaagatcattagaaaactcaacttctctctctggagacacatcaggaa 19980632  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  19980633 tttcatctggaaaaacttcaggaaa 19980657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 32602711 - 32602835
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || || || || || |||||||| || |||||  |||    
T  32602711 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaattcgacttccctttctggaggcacatcaggaa 32602810  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||  |||||||||||||||||    
T  32602811 tttcatttggaaaaacttcaggaaa 32602835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 21164741 - 21164629
Alignment:
Q  25 atacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaa 124  Q
    |||||||||||| |||||||||||| || |||||| || |  ||||| || || |||||||| ||||| ||| | || |||||  |||| ||||| ||||    
T  21164741 atacgataaggtgccatcgacaccggctccgttccaggaataagatcaatagaaaactcaacttctctctctagaggcacatcaggaatttcatctggaa 21164642  T
Q  125 aaacttcaggaaa 137  Q
    |||||||||||||    
T  21164641 aaacttcaggaaa 21164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 22042393 - 22042517
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || ||||| |  || || |||||  |||    
T  22042393 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctcttaggaggcacatcaggaa 22042492  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | |||||   |||||||||||||||    
T  22042493 tttcatctaaaaaaacttcaggaaa 22042517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 29301635 - 29301475
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||  |||||||||| | ||| || || || || || || || || || || || |||||||||||||| |||||| | |||||||    
T  29301635 gccgacatacggtaaggagccatcgacacaggctttgtacccggaacaaggtctattgaaaattccacttctctttctggtggcacatctggtatctcat 29301536  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttc 179  Q
      ||||| ||||| ||||| |||||||| ||  | |||||||| ||||||| ||| |||||    
T  29301535 ttggaaatacttccggaaattcattcactacaggcaacctgtcaatcacagtttggttttc 29301475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 19864299 - 19864184
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||| |||  ||| ||||| | ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||| ||||| |    
T  19864299 gacatacgatagggtgtcatagacacaggcttcgttccaggaacaagatcaatcgaaaactcaacttctctctctggaggcacatcaggaatttcatcag 19864200  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||||||| |||||    
T  19864199 gaaaaacttctggaaa 19864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 22030669 - 22030714
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttc 58  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||    
T  22030669 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttc 22030714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 262764 - 262983
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| ||||||||| || ||| ||||| || || || || ||||| ||||||||||| || |||||||| || ||| ||||||||||||    
T  262764 gacatacggtacggtgccatcgacatcggctttgttcccggaacaaggtcaatggaaaactcaacctccctgtctggtggcacgtctggaatctcatccg 262863  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  262864 gaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacagcctgattttctaacgacaaatatgccattaaagaatacatcagaattccatc 262963  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  262964 acgttctaactgcttcatct 262983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 107; Significance: 9e-54; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 49949 - 49727
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||||||||||  ||||||||||  |||||||||||| || || || || || || ||||| ||  ||||||||||||||||  |||||||||    
T  49949 gccgacatacgataaggtgacatcgacaccagcttcgttcctggaacaaggtcaattgaaaattcaacttccttttctggtggtacatcaggaatctcat 49850  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    || |||| ||||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||| ||| ||    
T  49849 ccagaaagacttcaggaaattcattcaccactggtaacctgtctatcacagcttgattctctaacgacaaacatgccatcaaagaatacatcaaaattcc 49750  T
Q  219 atctcgttctagctgcatcatct 241  Q
    ||| |||||||||| | ||||||    
T  49749 atcacgttctagctacttcatct 49727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 58983 - 58761
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||||||||||  ||||||||||  |||||||||||| || || || || || || ||||| ||  ||||||||||||||||  |||||||||    
T  58983 gccgacatacgataaggtgacatcgacaccagcttcgttcctggaacaaggtcaattgaaaattcaacttccttttctggtggtacatcaggaatctcat 58884  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    || |||| ||||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||| ||| ||    
T  58883 ccagaaagacttcaggaaattcattcaccactggtaacctgtctatcacagcttgattctctaacgacaaacatgccatcaaagaatacatcaaaattcc 58784  T
Q  219 atctcgttctagctgcatcatct 241  Q
    ||| |||||||||| | ||||||    
T  58783 atcacgttctagctacttcatct 58761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 65371 - 65149
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||||||||||  ||||||||||  |||||||||||| || || || || || || ||||| ||  ||||||||||||||||  |||||||||    
T  65371 gccgacatacgataaggtgacatcgacaccagcttcgttcctggaacaaggtcaattgaaaattcaacttccttttctggtggtacatcaggaatctcat 65272  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    || |||| ||||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||| ||| ||    
T  65271 ccagaaagacttcaggaaattcattcaccactggtaacctgtctatcacagcttgattctctaacgacaaacatgccatcaaagaatacatcaaaattcc 65172  T
Q  219 atctcgttctagctgcatcatct 241  Q
    ||| |||||||||| | ||||||    
T  65171 atcacgttctagctacttcatct 65149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 29153 - 29361
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||| | |||||||||| | || || || || || || |||||||||||||||||||| |||||| |||    
T  29153 tcggacgccgacatacgataaggtgccatcgacactggcttcgttcctagaacaaggtcaattgaaaattcaacctctctttctggtggcacatctggaa 29252  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||| ||| | ||| |||| ||||||||||||||||| || |||||  ||||||| | |||| |||||||    
T  29253 tctcatcaggaaaaacttctggaaattcattcacaactggcaacttgtcaatcacagcttgattttccaatgacaagtatgccatcaaagaaaacatcag 29352  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  29353 aattccatc 29361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 10547 - 10339
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| |||||||||||||||||| |||    
T  10547 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggtacatctggaa 10448  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    |||| ||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||| |||||||||||| || |||||  |||| |||| ||    
T  10447 tctcgtccggaaaaacttcaggaaactcattcaccattggtaaactgtcaatcacagcttgattctctaacgacaaatatcccattgaagaaaacataag 10348  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  10347 aattccatc 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 45192 - 44994
Alignment:
Q  23 acatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccgg 122  Q
    ||||||||||| || |||||||||||| |||||||||||| || || || || || || |||||||| ||||||||||| |||||| |||||||||||||    
T  45192 acatacgataaagtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggcacatctggaatctcatccgg 45093  T
Q  123 aaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||||||||||||||||| ||| | |||||||| |||||| ||||||| |||||||||||| ||||||||| |||| |||| ||||| |||||    
T  45092 aaaaacttcaggaaactcattcacaactggcaacctgtcaatcacaacttgattctctaacgacaaatatgccattaaagaaaacataagaattccatc 44994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 40099 - 39894
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || |||||||| |||||  |||||||||| |    
T  40099 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 40000  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || ||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||    
T  39999 ggaatacttctggaaattcattcactacaggtaaaccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcaggataccatc 39900  T
Q  222 tcgttc 227  Q
     |||||    
T  39899 acgttc 39894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 53585 - 53784
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||| ||||||||| |||||||||||| |||| |||| || || || || || || || |||||||| |||||||||||||||||| |||||||||| |    
T  53585 gacatgcgataaggtgccatcgacaccggcttcattcccggaacaaggtcaattgaaaattcaacctccctttctggtggtacatctggaatctcatcag 53684  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||||| | |||| |||| ||||| |||||    
T  53685 gaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacatcttgattttctaacgacaaagatgccatcaaagaaaacataagaattccatc 53784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 2719 - 2520
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||| |||||||| || || || || || || |||||||| |  ||||||||||||||| ||||||||||||    
T  2719 gacatacgataaggtgccatcgacaccggcttagttcctggaacaaggtcaattgaaaattcaacctcccgctctggtggtacatctggaatctcatccg 2620  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||||||||||||||| ||| ||||||| || |||||| |||||||||||||||||||| ||||||| | |||| |||| ||||| |||||    
T  2619 gaaaaacttcaggaaactcattcactactggtaacctatcaatcacaacttgattttctaacgacaaatatgccatcaaagaaaacataagaattccatc 2520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 69889 - 70113
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    |||||||| | ||| || || ||||| ||||||||| ||||||||||||  |||||||| || || ||||| || ||||||||||| || ||||||||||    
T  69889 aactcggctaattcagaagctgacatgcgataaggtgccatcgacaccgatttcgttcccggaacaagatcaatcgagaactcaacttccctttctggtg 69988  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    | |||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||| || | ||||||||| | |||||||||| ||||||| |     
T  69989 gcacatcaggaatctcatccggaaaaacttcaggaaattcattcaccactggtaacctgtcaattatagcttgattctttaacgacaaagatgccatcaa 70088  T
Q  201 agaatacatcagaatcccatctcgt 225  Q
    |||| |||| ||||| |||||||||    
T  70089 agaaaacataagaattccatctcgt 70113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 151088 - 151280
Alignment:
Q  1 aactcggcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtg 100  Q
    ||||| ||||||||||| ||||||    |||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||    
T  151088 aactcagcaagttcggacgccgac----gataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtg 151183  T
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    | |||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| |||||||    
T  151184 gcacatctggaatctcatccggaaaaacttcaggaaactcattcacaactggcaacctgtcaatcacagcttgattttctaacgacaaatatgccat 151280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 112 - 320
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||| |||||||||  ||||||||||| |||||||||||| || || || || || || |||||||| |||||||||||||||||| |||    
T  112 tcggaagctgacatgcgataaggtgtcatcgacaccggcttcgttcctggaacaagttcaattgaaaattcaacctccctttctggtggtacatctggaa 211  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    |||| ||||||||||||||||||||||||||||| | | | |||||||| || |||||||||||||||||||||||| ||||||| | |||| |||| ||    
T  212 tctcgtccggaaaaacttcaggaaactcattcacaattggcaacctgtcaattacagcttgattttctaacgacaaatatgccatcaaagaaaacataag 311  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  312 aattccatc 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 7273 - 7501
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || ||||||||||||||  |||    
T  7273 tcggacgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggtacatcgggaa 7372  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| | ||| |||||||| ||| | |||||||  ||||||||||||||||||||||||||  ||||||| | |||| |||| ||    
T  7373 tctcatcaggaaaaacttctgaaaattcattcacaactggcaacctgttaatcacagcttgattttctaacgacaagtatgccatcaaagaaaacatgag 7472  T
Q  213 aatcccatctcgttctagctgcatcatct 241  Q
    ||| ||||| |||||||| ||| ||||||    
T  7473 aattccatcacgttctagttgcttcatct 7501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 9592 - 9800
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||  |||||| |||||||||||| || || || || || || |||||||| |||||||||||||||||| |||    
T  9592 tcggaagctgacatacgataaggtgccataaacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggtacatctggaa 9691  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    |||| || | ||||||||||| ||||||||||||||||  ||||||||| |||||||||||||| |||||||||||| ||||||||| |||| |||| ||    
T  9692 tctcgtcggaaaaaacttcagcaaactcattcaccactgctaacctgtcaatcacagcttgattctctaacgacaaatatgccattaaagaaaacataag 9791  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  9792 aattccatc 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 1255 - 1045
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctg--gtggtacatctagaatctcatc 119  Q
    ||||||||||||||| |||||||||||| ||||||||| || || || || || ||||||||||||||||| |||   |||| ||||||  |||||||||    
T  1255 gacatacgataaggtgccatcgacaccggcttcgttcccggaacaaggtcaattgagaactcaacctctctctctcttgtggcacatctgaaatctcatc 1156  T
Q  120 cggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccca 219  Q
     ||||| ||||| ||||| |||||||||||| | |||||||| || | |||||||||||||||||||||| | ||||||| ||||||||| ||||| |||    
T  1155 aggaaacacttctggaaattcattcaccactggcaacctgtcaattatagcttgattttctaacgacaaatacgccattaaagaatacatgagaattcca 1056  T
Q  220 tctcgttctag 230  Q
    || ||||||||    
T  1055 tcacgttctag 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 5911 - 5700
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||||||||| |  || || || || || |||||||| ||||||||||| |||||  |||||||||| |    
T  5911 gacatacgataaggtgccatcgacaccggcttcgttcctggaataaggtcaattgaaaattcaacctccctttctggtggcacatcaggaatctcatcag 5812  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||||||  | ||||||||  ||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  5811 gaaacacttctggaaattcattcaccacaggcaacctgtcattcacaacttgattttctaacgacaaatatgccattaaagaatacatcagaattccatc 5712  T
Q  222 tcgttctagctg 233  Q
     |||| ||||||    
T  5711 acgttttagctg 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 251160 - 251371
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||| |||||||| |  || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  251160 gacatacgataaggtgccatcgacaccggctttgttcctggaataaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcag 251259  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||||||  | |||||||| |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||| ||    
T  251260 gaaacacttctggaaattcattcaccacaggcaacctgtcaatcacaacttgattttctaacgacaaatatgccattaaagaatacatcagaatcccgtc 251359  T
Q  222 tcgttctagctg 233  Q
     |||||||||||    
T  251360 acgttctagctg 251371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 14731 - 14945
Alignment:
Q  7 gcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| ||||    
T  14731 gcaagttcggacgccggcatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacat 14830  T
Q  107 ctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaata 206  Q
    || |||||||||| |||||||| ||||||||||||||||| ||| | ||| | || |||||||||||||| |||||||||||| ||||||| | |||| |    
T  14831 ctggaatctcatcaggaaaaacctcaggaaactcattcacaactggcaacatatcaatcacagcttgattctctaacgacaaatatgccatcaaagaaaa 14930  T
Q  207 catcagaatcccatc 221  Q
    ||| ||||| |||||    
T  14931 cataagaattccatc 14945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 36462 - 36652
Alignment:
Q  7 gcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    ||||||||||| |||||||||||||||||| |||||||||| | |||||||||| | || || || || || || |||||||| || |||||||| ||||    
T  36462 gcaagttcggacgccgacatacgataaggtgccatcgacacaggcttcgttcctagaacaaggtcaattgaaaattcaacctccctctctggtggcacat 36561  T
Q  107 ctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    || |||||||||| |||||||||||||||||||||||||| ||| | |||||  | |||||||||||||| |||||||||||| |||||||    
T  36562 ctggaatctcatcaggaaaaacttcaggaaactcattcacaactggcaacctagcaatcacagcttgattctctaacgacaaatatgccat 36652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 19717329 - 19717112
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||||||||| || || || || || || || ||||| || ||| |||| |||||  |||    
T  19717329 tcggaagctgacatacgataaggtgccatcgacaccgacttcgttcctggaacaaggtcaattgaaaattcgacctccctctctagtggcacatcaggaa 19717230  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||  ||||| ||||| ||||| |||||||||| | ||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  19717229 tctcattaggaaacacttctggaaattcattcaccattggtaacttgtcaatcacagcttgattttctaacgacaaatatgccattaaagaatacatcag 19717130  T
Q  213 aatcccatctcgttctag 230  Q
    ||| |||||  |||||||    
T  19717129 aattccatcatgttctag 19717112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 23278916 - 23279109
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||||||||| | |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||||||||| |    
T  23278916 gacatacgataaggtgacatcgacactggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaatctcatcag 23279015  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    ||||||||||||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||| ||||||| | ||||  |||||||||    
T  23279016 gaaaaacttcaggaaactcattcacaactggcaacctgtcaatcacagcttgattctctaacgacaaatatgccatcaaagaaagcatcagaat 23279109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 27789880 - 27790099
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| |||||||| || |||||  |||||||||| |    
T  27789880 gacatacggtacggtgccatcgacaccggctttgttccgggaacaaggtcaattgaaaactccacctccctttctggcggcacatcaggaatctcatcag 27789979  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || ||||||||||||||||||  || | |||| ||||||||||| ||||||||||||| | |||||||||||||| |||||||||| |||||    
T  27789980 ggaacacctccggaaactcattcaccactgctagcttgtcaatcacagcttggttttctaacgacagatatgccattagagaaaacatcagaattccatc 27790079  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  27790080 acgttctaactgcttcatct 27790099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 12576493 - 12576712
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || |  || || || || ||||| ||||| |||||||| || |||||  |||||||||| |    
T  12576493 gacatacggtacggtgccatcgacaccggctttgttccaggaataaggtcaattgaaaactccacctccctttctggcggcacatcaggaatctcatcag 12576592  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | || || || ||||||||||||||||||  || | |||| ||||||||||| ||||||||||||| | |||||||||||||| |||||||||| |||||    
T  12576593 ggaacacctccggaaactcattcaccactgctagcttgtcaatcacagcttggttttctaacgacagatatgccattagagaaaacatcagaattccatc 12576692  T
Q  222 tcgttctagctgcatcatct 241  Q
     ||||||| |||| ||||||    
T  12576693 acgttctaactgcttcatct 12576712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 23098327 - 23098102
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||| ||| |||||||||||| |||||||| ||| || || || || || ||||| ||||| || || ||||| |||||  | ||||    
T  23098327 gatgctgacatacgatatggtgccatcgacaccggcttcgttcttggaacaaggtcaattgaaaactccacctccctctccggtggcacatcagggatct 23098228  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| || ||||| || |||||||| ||  |||| ||||| |||||||| ||||| || ||||||||| ||||||| | |||||||||||||||    
T  23098227 catcaggaaacacctcagggaattcattcactaccggtaatctgtcaatcacagcctgattctccaacgacaaagatgccatcaaagaatacatcagaat 23098128  T
Q  216 cccatctcgttctagctgcatcatct 241  Q
     ||||| ||||||| |||| ||||||    
T  23098127 tccatcacgttctaactgcttcatct 23098102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 25256049 - 25256233
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||  | |  ||||| || |  || |||||||| || |||||||| |||||| |||    
T  25256049 tcgggtgccgacatacgataaggtgccatcgacaccggcttcgttccgagaataagatcaattgcaaattcaacctccctctctggtggcacatctggaa 25256148  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| ||||||||||| ||||| |||||||| ||| | ||||| || |||||||||||||| || ||||||||  |||||||    
T  25256149 tctcatcaggaaaaacttctggaaattcattcacaactggcaacctatcaatcacagcttgattctccaacgacaagtatgccat 25256233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 24875052 - 24874899
Alignment:
Q  23 acatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccgg 122  Q
    |||||||||||||| |||||||||||| ||||||||| || |||||||| || || |||||||| ||||| ||||| || ||||| ||||||||||| ||    
T  24875052 acatacgataaggtgccatcgacaccggcttcgttccagggactagatcaatagaaaactcaacttctctctctggaggcacatcaagaatctcatctgg 24874953  T
Q  123 aaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||||||||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  24874952 aaaaacttcaggaaattcacacaccacttgtagcttatcaatcactgcttgatt 24874899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 9337722 - 9337876
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  9337722 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 9337821  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  9337822 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 9337876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 9486356 - 9486510
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  9486356 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 9486455  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  9486456 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 9486510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 16983380 - 16983534
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  ||||||||||||    
T  16983380 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatccg 16983479  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  16983480 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 16983534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 17001140 - 17001294
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  |||||||||| |    
T  17001140 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatctg 17001239  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  17001240 gaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 17001294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 24264510 - 24264664
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  24264510 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 24264609  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  24264610 gaaaaacttcaggaaaatcacacaccaccggtaacctatcaatcactgcttgatt 24264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 27220156 - 27220310
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  27220156 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 27220255  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  || ||||||| ||||| ||||||||    
T  27220256 gaaaaacttcaggaaattcacacaccaccggtgacctgtcaatcactgcttgatt 27220310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 44383873 - 44383719
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  44383873 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 44383774  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  44383773 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 44383719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 27373400 - 27373563
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  27373400 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 27373499  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| |||||||||||| |||| |||  ||||||  ||||||| || ||||| ||||||||    
T  27373500 tctcatctggaaaaacttcaagaaattcacacaccaccggtaacctatcaatcactgcttgatt 27373563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 24712174 - 24712328
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  24712174 gacatacgataaggtgccatcgaaaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 24712273  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  24712274 gaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 24712328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 41606688 - 41606534
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| || || || |||||  |||||||||| |    
T  41606688 gacatacgataaggtgccatcgagaccggcttcgttccagggacaagatcaatagaaaactcaacttctctctcaggaggcacatcaggaatctcatctg 41606589  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  41606588 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 41606534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 10870990 - 10871105
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||||||||| |    
T  10870990 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaatctcatctg 10871089  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  10871090 gaaaaacttcaggaaa 10871105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 21143354 - 21143190
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || |||||| |||||||| |||||||||||| ||||||||| || |||||||| || || |||||||| ||||| ||||| || |||||  ||    
T  21143354 ttcggaagcagacataagataaggtgccatcgacaccggcttcgttccaggaactagatcaatagaaaactcaacttctctctctggaggcacatcagga 21143255  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    || ||||| || ||||||| |||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  21143254 atttcatctgggaaaactttaggaaaatcacacaccacttgtagcttatcaatcactgcttgatt 21143190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 1065891 - 1066058
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || | ||| || || || |||||||| || |||||||| |||||  ||||||| || |    
T  1065891 gacatacggtacggtgccatcgacaccggcttagttcctggaacaacatcaattgaaaattcaacctccctctctggtggcacatcaggaatctcttcag 1065990  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaa 189  Q
    |||| ||||| ||||| |||||||| ||  ||||||  || ||||||||||||||||| | |||||||    
T  1065991 gaaacacttccggaaattcattcactacgggtaacccatcaatcacagcttgattttccaccgacaaa 1066058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 31832798 - 31832965
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| || ||||| || || || |||||||| || || ||||| |||||  |||||||||| |    
T  31832798 gacatacggtacggtgccatcgacaccggcttagttcctggaacaagatcaattgaaaattcaacctccctctccggtggcacatcaggaatctcatcag 31832897  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaa 189  Q
    | |||||||| ||||| |||||||| ||  |||| |  || ||||||||||||||||| | |||||||    
T  31832898 ggaaaacttctggaaattcattcactaccggtaaaccatcaatcacagcttgattttccaccgacaaa 31832965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 21323578 - 21323454
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||| ||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || ||||   |||    
T  21323578 tcggaagctgacatccgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacataaggaa 21323479  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  21323478 tttcatctggaaaaacttcaggaaa 21323454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 22323584 - 22323491
Alignment:
Q  83 caacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||| ||||| ||||| || |||||  |||||||||| ||||||||||||||||| |||  ||||||  |||||||||| ||||| ||||||||    
T  22323584 caacttctctctctggaggcacatcaggaatctcatctggaaaaacttcaggaaattcacacaccaccggtaacctgtcaatcactgcttgatt 22323491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 23204445 - 23204569
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||| || || || || ||||| || || ||||| || || |||||||| || |||||  |||    
T  23204445 tcggaagcagacatacgataaggtgccatcgacaccggctttgtcccaggaacaagatcaatagaaaactcgacttccctttctggaggcacatcaggaa 23204544  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||  |||||||||||||||||    
T  23204545 tttcatttggaaaaacttcaggaaa 23204569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 24657969 - 24657846
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| |||||||||||| |||||||||  | || ||||| || || |||||||| || || ||||| || |||||  |||    
T  24657969 tcggaagcagacatacg-taaggtgccatcgacaccggcttcgttccacgaacaagatcaatagaaaactcaacttccctctctggaggcacatcaggaa 24657871  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  24657870 tttcatctggaaaaacttcaggaaa 24657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 24705785 - 24705670
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||  || || ||||| || || ||||| || ||||| || || || |||||  |||| ||||| |    
T  24705785 gacatacgataaggtgccatcgacaccggcttcgttctaggaacaagatcaatagaaaactcgacttctctctccggaggcacatcaggaatttcatctg 24705686  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||| ||||||    
T  24705685 gaaaaactttaggaaa 24705670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 16927500 - 16927597
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatc 119  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  ||||||||||    
T  16927500 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatc 16927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 23106031 - 23105916
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| ||||| | ||||||||| || || ||||| || || |||||||| | ||| ||||| || |||||  |||| ||||| |    
T  23106031 gacatacgataaggtgtcatagacacaggcttcgttccaggaacaagatcaatagaaaactcaacttttctctctggaggcacatcaggaatttcatcag 23105932  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||||||| |||||    
T  23105931 gaaaaacttccggaaa 23105916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 16924117 - 16924215
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatcc 120  Q
    ||||||||||||||  ||||||| |||| ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  |||||||||||    
T  16924117 gacatacgataaggcgccatcgagaccggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatctcatcc 16924215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 19650353 - 19650313
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctgg 62  Q
    ||||||||||||||| |||||||||||| ||| ||||||||    
T  19650353 gacatacgataaggtgccatcgacaccgactttgttcctgg 19650313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 24677629 - 24677742
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||  ||||| | ||||||||| || |  ||||| || || |||||||| ||||| ||||| || || ||  |||| ||||| |    
T  24677629 gacatacgataaggtgcca--gacacaggcttcgttccaggaaaaagatcaatagaaaactcaacttctctctctggaggcacgtcaggaatttcatctg 24677726  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  24677727 gaaaaacttcaggaaa 24677742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 757 - 941
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||||||| || |||||||||||| |||||||||||| || || || || || || |||||| | ||||||||||| ||||||||||    
T  757 tcggaagctgacatacgataacgtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaaccaccctttctggtggcacatctagaa 856  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||| |||||||    
T  857 tctcatcaggaaacacttctggaaattcattcacaactggtaacctgtcaatcacagcttgattctctaacgacaaatatgccat 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 21660 - 21868
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||| |||||| ||| |||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |    
T  21660 gacatacgataaggtgccatcaacaccggctttgttcctggaacaaggtcaattgaaaattcaacctccctatctggtggcacatcaggaatctcatcag 21759  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| ||||||||||| || ||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  21760 gaaacacttctggaaattcattcaccaccagcaacttgtcaatcaaagcttgattttctaacgacaaacatgccattaaagaatacataagaattccatc 21859  T
Q  222 tcgttctag 230  Q
     || |||||    
T  21860 acgatctag 21868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 5274 - 5464
Alignment:
Q  7 gcaagttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| || || || || || || |||||||| || ||  |||| ||||    
T  5274 gcaagttcggacgccgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctcactctcaagtggcacat 5373  T
Q  107 ctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    || |||||||||| |||||||| ||||||||||||||||| ||| | ||| | || |||||||||||||| |||||||||||| |||||||    
T  5374 ctggaatctcatcaggaaaaacctcaggaaactcattcacaactggcaacatatcaatcacagcttgattctctaacgacaaatatgccat 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 582 - 389
Alignment:
Q  40 atcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaact 139  Q
    |||||||||| ||| |||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| ||||| ||||| ||||| |    
T  582 atcgacaccggctttgttcctggaacaaggtctattgaaaattcaacctccctctctggtggcacatcaggaatctcatcaggaaacacttctggaaatt 483  T
Q  140 cattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttctagctg 233  Q
    ||||||||||  | |||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| || |||||||||||    
T  482 cattcaccacaggcaacctgtcaatcacggcttgattttctaacgacaaatatgccattaaagaatacatcagaatcccgtcccgttctagctg 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 6655 - 6775
Alignment:
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||| ||||     
T  6655 gtacatctggaatctcatccggaaaaacttcaggaaattcattcaccactggtaacctgtcaatcaccgcttgattttctaacgacaaatatgcgattaa 6754  T
Q  201 agaatacatcagaatcccatc 221  Q
    ||||||||||||||| |||||    
T  6755 agaatacatcagaattccatc 6775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 221
Target Start/End: Original strand, 325261 - 325444
Alignment:
Q  38 ccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    |||||||| ||| ||||||||| |  || || || || || |||| |||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  325261 ccatcgacgccggcttcgttcccgtaacaaggtcaattgaaaactaaacctccctctctggtggtacatctggaatctcatccggaaaaacttcaggaaa 325360  T
Q  138 ctcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
     |||||||||||  |||||||||| |||||||||||||| |||||||||||| ||||||| | |||| |||| ||||| |||||    
T  325361 ttcattcaccaccggtaacctgtcaatcacagcttgattctctaacgacaaatatgccatcaaagaaaacataagaattccatc 325444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 14652 - 14869
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||  |||||||||||| || || || || || || |||||||| || ||| |||| |||||  |||    
T  14652 tcggaagctgacatacgataaggtgccatcgacaccagcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctagtggcacatcaggaa 14751  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||| |||||  |||| |||||||||| | | |||||||| |||||| |||||||||||||||||||| ||||||||  ||||||||| ||    
T  14752 tctcatcaggaaacacttctagaaattcattcaccattggcaacctgtcaatcacaacttgattttctaacgacaaatatgccatttaagaatacataag 14851  T
Q  213 aatcccatctcgttctag 230  Q
    ||| ||||| ||||||||    
T  14852 aattccatcacgttctag 14869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 630 - 422
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||| ||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  630 tcggaagctgacatacgataaggtgccattgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 531  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| |||||||| ||||||||||||||||| ||| | |||||||  ||||||||||||||||| || |||||  ||||||| |  ||| |||||||    
T  530 tctcatcaggaaaaacctcaggaaactcattcacaactggcaacctgttaatcacagcttgattttccaaagacaagtatgccatcaaggaaaacatcag 431  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  430 aattccatc 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 1 - 204
Alignment:
Q  24 catacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccgga 123  Q
    |||||| || ||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||  |||||||||| |||    
T  1 catacggtatggtgccatcgacaccggcttcgttcctggaacgaggtcaattgaaaattcaacctccctctctggtggcacatcaggaatctcatcagga 100  T
Q  124 aaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctc 223  Q
    || ||||| || ||||||||||| ||  |||||||||| ||||||||||||||||||||||||||   |||||| | |||||||||||||||||| || |    
T  101 aacacttctgggaactcattcactacaggtaacctgtcaatcacagcttgattttctaacgacaattgtgccatcaaagaatacatcagaatcccgtccc 200  T
Q  224 gttc 227  Q
    ||||    
T  201 gttc 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 4716 - 4918
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    |||||||||||||||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| || |||||||| ||||||||||||||||    
T  4716 gccgacatacgataaggtgccatcgacaccggcttcgttccgggcacaagatcgattgaaaattcaacctccctctctggtggcacatctagaatctcat 4815  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccc 218  Q
    | ||||||||||  ||||| |||||||| ||  | || ||||| |||||||||||||| || || |||||  ||||||| | |||| |||| ||||| ||    
T  4816 caggaaaaacttatggaaattcattcacaaccggcaatctgtcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacattagaattcc 4915  T
Q  219 atc 221  Q
    |||    
T  4916 atc 4918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 1260 - 1039
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  1260 tcggacgccgacatacgctaaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 1161  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||| ||| | |||||||| |||||  |||||||||| || |||||  ||||||| | |||| |||| ||    
T  1160 tctcatcaggaaaaacttctggaaattcattcacaactggcaacctgtcaatcaccacttgattttccaatgacaagtatgccatcaaagaagacattag 1061  T
Q  213 aatcccatctcgttctagctgc 234  Q
    ||| ||||| || || ||||||    
T  1060 aattccatcacgctccagctgc 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 25650 - 25855
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||| ||||| ||| ||||||||||||  |||||||| || || ||||| || ||||||||||| || ||||  ||| | |||||  ||||||||||||    
T  25650 gacatgcgatacggtgccatcgacaccggtttcgttcccggaacaagatcaatcgagaactcaacttcccttttcggtagcacatcaggaatctcatccg 25749  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    ||||||||||||| || |||||||||||| ||| || ||| || ||||||||||| |||||||||||| ||||||| | |||| |||| ||||| |||||    
T  25750 gaaaaacttcagggaattcattcaccactggtagcccgtcaattacagcttgattctctaacgacaaagatgccatcaaagaaaacataagaattccatc 25849  T
Q  222 tcgttc 227  Q
    ||||||    
T  25850 tcgttc 25855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 24754 - 24965
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||||| || ||| |||||||| || || || || || || |||||||| ||||||||||  |||||  ||||||||||      
T  24754 gacatacgataaggtgccatcgacatcggctttgttcctggaacaaggtcaattgaaaattcaacctccctttctggtgcaacatcaggaatctcatcaa 24853  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| ||||||||||||   ||||| || ||||||||||||||||||||||||||  |||||  || ||||||||||||||| |||||    
T  24854 gaaacacttctggaaattcattcaccactgacaacctatcaatcacagcttgattttctaacgacaagtatgcctgtaaagaatacatcagaattccatc 24953  T
Q  222 tcgttctagctg 233  Q
     | |||||||||    
T  24954 acattctagctg 24965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 44192 - 44079
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||||||| || |||||||||||| ||||||| | || || |||| ||| || || |||||||| || ||||||||||||||| |||    
T  44192 tcggacgccgacatacgataatgtgccatcgacaccggcttcgttacgggcacaagat-gattgaaaattcaacctccctctctggtggtacatctggaa 44094  T
Q  113 tctcatccggaaaaa 127  Q
    ||| ||| |||||||    
T  44093 tcttatcaggaaaaa 44079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 10558 - 10333
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| |||||||| || ||| |||||||||||| ||| ||||| || || || || || || ||||| ||||| || ||| | || |||||  ||||||    
T  10558 gatgctgacatacggtatggtgccatcgacaccggctttgttcccggaacaaggtcaatcgaaaactccacctccctctctaggggcacatcaggaatct 10459  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| || || |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||  ||||||| |  |||||||||| |||    
T  10458 catcaggaaacacctccggaaactcattcaccactggtaacctgtcaatcacagcttgattttccaacgacaaggatgccatcaaggaatacatcaaaat 10359  T
Q  216 cccatctcgttctagctgcatcatct 241  Q
     ||||| ||||||| |||| ||||||    
T  10358 tccatcacgttctaactgcttcatct 10333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 11489 - 11710
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| ||||||||| || || || ||||| || || |||||||| || |||||||| |||||| |||    
T  11489 tcggacgccgacatacggtaaggtgccatcgacaccggcttcgttccgggaacaaggtcgattgaaaattcaacctccctctctggtggcacatctggaa 11588  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| ||| |||| ||  |||| || || |||||||||||||| || || |||||  ||||||| | |||| |||| |     
T  11589 tctcatcaggaaaaacttctggaaattcactcacaaccggtaatctatcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacattaa 11688  T
Q  213 aatcccatctcgttctagctgc 234  Q
    ||||||||| ||||||| ||||    
T  11689 aatcccatcacgttctaactgc 11710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 29472 - 29677
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||||  || ||||| || || || |||| ||| || |||||||| |||||  |||||||||| |    
T  29472 gacatacggtatggtgccatcgacaccggcttcgttcctgtaacaagatcaattgaaaattcaatctccctctctggtggcacatcaggaatctcatcag 29571  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| || ||||||||||| |||||||||||||||||||| |||||   | |||| | |||||||||||||||||| ||    
T  29572 gaaacacttctggaaattcattcactacaagtaacctgtcaatcacagcttgattttctaatgacaattgtaccatcaaagaatacatcagaatcccgtc 29671  T
Q  222 tcgttc 227  Q
     |||||    
T  29672 ccgttc 29677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 19409 - 19228
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| ||| || ||||  |||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  19409 tcggaagctgacatacgttaatgtgccatttacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 19310  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgc 194  Q
    ||||||| |||||||| ||||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||| ||||    
T  19309 tctcatcaggaaaaacctcaggaaactcattcacaactggcaacctgtcaatcacagcttgattctctaacgacaaatatgc 19228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 175517 - 175733
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||| ||  | ||||| || || || ||||||||||| |||||||| ||||| ||||    
T  175517 tcggatgccgacatacgttaaggtgccatcgacaccggcttcgttccgggatcaagatcaattgaaaattcaacctctctctctggtggcacatcaagaa 175616  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||| ||| ||||||||||| ||||| |||| ||| ||| | || || || |||||||||||||| || || |||||  ||||||| | |||| ||||||     
T  175617 tcttatcaggaaaaacttctggaaattcatacacaactggcaatctatcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacatcaa 175716  T
Q  213 aatcccatctcgttcta 229  Q
    ||| ||||| |||||||    
T  175717 aattccatcacgttcta 175733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 99258 - 99151
Alignment:
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| | |||||||| |||||||||||||||  ||||||| | |||| |||| ||    
T  99258 tctcatccggaaaaacttcaggaaactcattcaccactggtaacatgtcaaacacagcttaattttctaacgacaaggatgccatcaaagaaaacataag 99159  T
Q  213 aatcccat 220  Q
    ||| ||||    
T  99158 aattccat 99151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 5896 - 5777
Alignment:
Q  101 gtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattag 200  Q
    |||||||  ||||||||||| |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||||     
T  5896 gtacatccggaatctcatccagaaaaacttcaggaaattcattcaccactggtaacctgtcaatcacagcttgattttctaacgacaaatatgtcattaa 5797  T
Q  201 agaatacatcagaatcccat 220  Q
    |||| |||| ||||| ||||    
T  5796 agaaaacataagaattccat 5777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 21312 - 21109
Alignment:
Q  21 cgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatcc 120  Q
    ||||||||| |||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||||||||      
T  21312 cgacatacggtaaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaatctcatta 21213  T
Q  121 ggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccat 220  Q
    ||||||||||| ||||| |||||||| ||| | |||||||| |||||||||| |||||| || |||||  ||||||| |  ||| |||| ||||| ||||    
T  21212 ggaaaaacttctggaaattcattcacaactggcaacctgtcaatcacagcttaattttccaatgacaagtatgccatcaaggaaaacattagaattccat 21113  T
Q  221 ctcg 224  Q
    ||||    
T  21112 ctcg 21109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 13131 - 12929
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||||||||  |    
T  13131 gacatacggtatggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaatctcattag 13032  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| ||||| |||||||| ||| | |||||||| |||||||||| |||||| || |||||  ||||||| |  ||| |||| ||||| |||||    
T  13031 gaaaaacttctggaaattcattcacaactggcaacctgtcaatcacagcttaattttccaatgacaagtatgccatcaaggaaaacattagaattccatc 12932  T
Q  222 tcg 224  Q
    |||    
T  12931 tcg 12929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 11347 - 11552
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| ||||| || || || || || || || |||||||| || ||| |||| |||||  |||||||||| |    
T  11347 gacatacggtacggtgccatcgacaccggcttagttcccggaacaaggtcaattgaaaattcaacctccctctctagtggcacatcaggaatctcatcag 11446  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||| ||  ||||||  || ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  11447 gaaacacttccggaaattcattcactacaggtaacccatcaatcacagcttgattttctaacgacaattgtgccattagagaatacatcagaattccatc 11546  T
Q  222 tcgttc 227  Q
     |||||    
T  11547 acgttc 11552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 12325 - 12509
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| || |||||||| |||||| |||    
T  12325 tcggacgcagacatacggtaaggtgccatcgacaccggcttcgttccgggcacaagatcgattgaaaattcaacctccctctctggtggcacatctggaa 12424  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| ||||||||||| ||||| |||||||||||  | || || || |||||| ||||||| || ||||||||  |||||||    
T  12425 tctcatcaggaaaaacttctggaaattcattcaccaccggcaatctatcaatcacatcttgattctccaacgacaagtatgccat 12509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 64294 - 64086
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  64294 tcggacgccgacatacggtaaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 64195  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||| ||| ||||||||||| ||||| |||||||| ||  | || ||||| |||||||||||||| || || |||||  ||||||| | |||| |||| ||    
T  64194 tctgatcaggaaaaacttctggaaattcattcacaaccggcaatctgtcaatcacagcttgattctccaatgacaagtatgccatcaaagaaaacattag 64095  T
Q  213 aatcccatc 221  Q
    ||| |||||    
T  64094 aattccatc 64086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 65955 - 65856
Alignment:
Q  131 caggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatctcgttctag 230  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||    
T  65955 caggaaattcattcaccactggtaacctgtcaatcacagcctgattttctaacgacaaatatgccattaaagaatacatcagaattccatcacgttctag 65856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 515119 - 514925
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||||| |  || || || || || ||||||||||| |||||||| |||||  ||||||||||      
T  515119 gacatacggtatggtgccatcgacaccggctttgttcctggaatgaggtcaattgaaaattcaacctctctctctggtggcacatcaggaatctcatcat 515020  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatc 216  Q
    |||| ||||| || ||||||||||| ||  |||||| ||| ||||||||||||||||||||||||||   |||||| | ||||||||||||||||    
T  515019 gaaacacttctgggaactcattcactacaggtaaccagtcaatcacagcttgattttctaacgacaattgtgccatcaaagaatacatcagaatc 514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 452988 - 452804
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||| |||||||||| |||||||||||| |||||||||||| || || || || || || ||||| || || |||||||| |||||| |||    
T  452988 tcggacgccgacaaacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgataattcaacttccctctctggtggcacatctggaa 452889  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccat 197  Q
    ||||||| ||||||||||| | ||| |||||||| ||  | || || || |||||||||||||| || ||||||||| |||||||    
T  452888 tctcatcaggaaaaacttccgaaaattcattcacaaccggcaaactatcaatcacagcttgattctccaacgacaaatatgccat 452804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 1317 - 1092
Alignment:
Q  16 gatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatct 115  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||| || || || || || || ||||| || ||||||||  | |||||  ||||||    
T  1317 gatgctgacatacgataaggtgccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacttccctttctggcagcacatcaggaatct 1218  T
Q  116 catccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||| ||||| || |||||||| ||| | |||| | ||||| |||| || ||||| ||||| || ||||||||  ||||||| |  || |||||||||||    
T  1217 catctggaaacacctcaggaaaatcacttaccattggtaacttgtcaattacagcctgattctccaacgacaacgatgccatcaaggagtacatcagaat 1118  T
Q  216 cccatctcgttctagctgcatcatct 241  Q
     ||||| |||||||||||| ||||||    
T  1117 tccatcacgttctagctgcttcatct 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 33875 - 34080
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||||||||  ||||||||||| || || || || || || |||||||| ||||||||||| |||||| |||| ||||| |    
T  33875 gacatacgataaggtgccatcgacaccggattcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggcacatctcgaatttcatcag 33974  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| ||||| |||||||  | | | ||||| || ||||| ||||||||||| || |||||  ||||||| | |||| |||||||||| |||||    
T  33975 gaaacacttctggaaattcattcataattggcaacctttcaatcaccgcttgattttcaaatgacaagtatgccatcaaagaaaacatcagaattccatc 34074  T
Q  222 tcgttc 227  Q
     |||||    
T  34075 acgttc 34080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 42227 - 42448
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| |||||||||||| |||||||||| | || || || || || || |||||||| || |||||||| |||||| |||    
T  42227 tcggaagctgacatacggtaaggtgccatcgacaccgacttcgttcctagaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 42326  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||| ||||| ||||| |||||||| ||  | || ||||| ||| |||||||||| |||||||||||| ||||||| |  ||| |||| |     
T  42327 tctcatcaggaaacacttctggaaattcattcacaaccggcaatctgtcaatcgcagcttgattctctaacgacaaatatgccatcaaggaaaacattaa 42426  T
Q  213 aatcccatctcgttctagctgc 234  Q
    ||| ||||| ||||||| ||||    
T  42427 aattccatcacgttctaactgc 42448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 49634 - 49850
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| ||||||| | || |||||||||||| || || || || || || |||||||| ||||||||||| |||||| |||    
T  49634 tcggacgctgacatacggtaaggtgccatcgatatcggcttcgttcctggaacaaggtcaattgaaaattcaacctccctttctggtggcacatctggaa 49733  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| |||||||| ||  | || ||||| |||||||||||||| || || ||||   ||||||| | |||| |||| ||    
T  49734 tctcatcaggaaaaacttctggaaattcattcacaaccggcaatctgtcaatcacagcttgattctccaatgacaggtatgccatcaaagaaaacattag 49833  T
Q  213 aatcccatctcgttcta 229  Q
    ||| ||||| |||||||    
T  49834 aattccatcacgttcta 49850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 176
Target Start/End: Original strand, 40681 - 40847
Alignment:
Q  10 agttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatcta 109  Q
    |||||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||      
T  40681 agttcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcag 40780  T
Q  110 gaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||| ||||||||||||||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  40781 gaatctcatctggaaaaacttcaggaaattcacacaccacttgtagcttatcaatcactgcttgatt 40847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 13899 - 13775
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| |||||| || || || ||||| || || ||||| || || || ||||| || ||||   |||    
T  13899 tcggaagcagacatacgataaggtgccatcgacaccggcttcgtcccaggaacaagatcaatagaaaactcgacttccctctctggaggcacataaggaa 13800  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||  |||||||||||||||||    
T  13799 tttcatttggaaaaacttcaggaaa 13775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 2047 - 1872
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||||||| || ||||||||||||  |||||||| || |||||||| || |  || |||||||| || |||||||| |||||  |||    
T  2047 tcggacgccgacatacgataaagtgccatcgacaccggattcgttccaggaactagatcaattgcaaattcaacctccctctctggtggcacatcaggaa 1948  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaa 188  Q
    ||||||| ||||||||||| ||||| |||||||| ||  | || || || |||||| ||||||| || ||||||||    
T  1947 tctcatcaggaaaaacttccggaaattcattcacaaccggcaatctatcaatcacaacttgattctccaacgacaa 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 31085 - 30874
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| || ||| |||||||||||| ||| |||||| | || || || || || || ||||| || || |||||||| |||||  |||||||||| |    
T  31085 gacatacggtatggtgccatcgacaccggctttgttcctagaacaaggtcaattgaaaattcaacttccctctctggtggcacatcaggaatctcatcag 30986  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||| ||||| | ||| || ||||||||| | |||||||| ||||||||||| |||||||  || ||| | ||||| |||||| |||||| ||| |||||    
T  30985 gaaacacttctgaaaattctttcaccactggcaacctgtcaatcacagcttggttttctacggataaataagccatcagagaaaacatcaaaattccatc 30886  T
Q  222 tcgttctagctg 233  Q
     |||||||||||    
T  30885 acgttctagctg 30874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 29060 - 28885
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||||||| || ||||||||||||  |||||||| || |||||||| || |  || |||||||| || |||||||| |||||  |||    
T  29060 tcggacgccgacatacgataaagtgccatcgacaccggattcgttccaggaactagatcaattgcaaattcaacctccctctctggtggcacatcaggaa 28961  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaa 188  Q
    ||||||| ||||||||||| ||||| |||||||| ||  | || || || |||||| ||||||| || ||||||||    
T  28960 tctcatcaggaaaaacttccggaaattcattcacaaccggcaatctatcaatcacaacttgattctccaacgacaa 28885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 110208 - 110347
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttcta 181  Q
    |||||||| || |||||||| |||||| |||||||||| ||||||||||| ||||| |||||||  ||| | |||||||| ||||||||||||||||| |    
T  110208 tcaacctccctctctggtggcacatctggaatctcatcgggaaaaacttctggaaattcattcatgactggcaacctgtcaatcacagcttgattttcca 110307  T
Q  182 acgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    | |||||  ||||||| | |||| |||| ||||| |||||    
T  110308 atgacaagtatgccatcaaagaaaacattagaattccatc 110347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 52700 - 52576
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||| ||||| | ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||   ||    
T  52700 tcggaagctgacatacgataaggtgccatagacacaggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcagtaa 52601  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  52600 tttcatctggaaaaacttcaggaaa 52576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 2406 - 2576
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    |||||| |||| |||||| |||||||||||| ||||||||| || ||  ||||||| || || |||||||| || |||||||| ||||||||||||||||    
T  2406 gccgacgtacggtaaggtgccatcgacaccggcttcgttccgggcacatgatcgattgaaaattcaacctccctctctggtggcacatctagaatctcat 2505  T
Q  119 ccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaa 189  Q
    | |||||| |||| ||||| | |  ||| ||| | || || || |||||||||||||| || |||||||||    
T  2506 caggaaaagcttctggaaatttacccacaactggcaatctatcaatcacagcttgattctccaacgacaaa 2576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 29063 - 29277
Alignment:
Q  20 ccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatc 119  Q
    ||||||||||||||||| |||||||||||| ||||||||| || || ||||| || |  || |||||||| || | |||||| |||||  ||||||||||    
T  29063 ccgacatacgataaggtgccatcgacaccggcttcgttccgggaacaagatcaattgcaaattcaacctccctctttggtggcacatcaggaatctcatc 29162  T
Q  120 cggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatccca 219  Q
     |||||||||   ||||| |||||||| ||  | || || || |||||||||||||| |||||||||||  ||||||| |  ||| ||||||  || |||    
T  29163 aggaaaaactattggaaattcattcacaacaggcaatctatcaatcacagcttgattctctaacgacaagtatgccatcaaggaaaacatcaagattcca 29262  T
Q  220 tctcgttctagctgc 234  Q
    || ||||||| ||||    
T  29263 tcacgttctaactgc 29277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 21785 - 21939
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || ||||   |||||||||| |    
T  21785 gacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacattaggaatctcatctg 21884  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  21885 gaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 4864 - 4648
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| |||||||||||| ||||| |||||||||| | |||| |||| || || ||||| || || || |||||||| || |||||||| |||||  |||    
T  4864 tcggacgccgacatacgagaaggtgccatcgacactggcttcattcccggaacaagatcaattgaaaattcaacctccctctctggtggaacatcaggaa 4765  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcag 212  Q
    ||||||| ||||||||||| ||||| | |||||| ||  | || || || |||||||  ||||| |||||||||||  ||||||| | |||| |||| |     
T  4764 tctcatcaggaaaaacttctggaaattgattcacaaccggaaatctatcaatcacagactgattctctaacgacaagtatgccatcaaagaaaacattaa 4665  T
Q  213 aatcccatctcgttcta 229  Q
     |||||||| |||||||    
T  4664 gatcccatcacgttcta 4648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 9469 - 9593
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| |||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  9469 tcggaagcagacatacgataaggtgccatcgagaccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 9568  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    ||||||| |||||||||||||||||    
T  9569 tctcatctggaaaaacttcaggaaa 9593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 9896 - 10060
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||| |||||||||||||||| ||||||||| || || ||||| || || ||||| || | ||| ||| | || |||||  ||    
T  9896 ttcggaagcagacatacgatatggttccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttatctctctagaggcacatcagga 9995  T
Q  112 atctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    |||||||||||||||||||||||||| |||  ||||||  ||| ||| || ||||| ||||||||    
T  9996 atctcatccggaaaaacttcaggaaattcacacaccaccggtagcctatcaatcactgcttgatt 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 16649 - 16761
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||| |||||||||||| ||||||||| || || |||||||| || || |||||||| || |||||||| |||||| |||||||||    
T  16649 gccgacatacggtaaggtgccatcgacaccggcttcgttccgggcacaagatcgattgaaaattcaacctccctctctggtggcacatctggaatctcat 16748  T
Q  119 ccggaaaaacttc 131  Q
    | | |||||||||    
T  16749 cagcaaaaacttc 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 3256 - 3455
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||| |||||||||||| |||||||||| | || || || || || || |||||||| || |||||||| |||||| |||||||||| |    
T  3256 gacatacggtaaggtgccatcgacaccggcttcgttcctagaacaagctcaattgaaaattcaacctccctctctggtggcacatctggaatctcatcag 3355  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| ||||| ||| |||| |     || ||||| |||||||||||||| || || |||||  ||||||| | |||| |||| ||||| |||||    
T  3356 gaaaaacttctggaaattcaatcacaaacgacaaactgtcaatcacagcttgattctccaaagacaagtatgccatcaaagaaaacataagaattccatc 3455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 28607 - 28731
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||| | ||||||||| || || |||||  | || ||||| || ||||| ||||| || |||||  |||    
T  28607 tcggaagcagacatacgataaggtgccatcgacactggcttcgttccaggaacaagatcattagaaaactcgacttctctctctggaggcacatcaggaa 28706  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  28707 tttcatctggaaaaacttcaggaaa 28731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 36027 - 36151
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || | ||| | ||| || |||||  |||    
T  36027 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttttctctttggaggcacatcaggaa 36126  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  36127 tttcatctggaaaaacttcaggaaa 36151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 67814 - 67669
Alignment:
Q  82 tcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttcta 181  Q
    |||||||| || |||||||| |||||  |||| ||||| ||||| ||||| || ||| ||||||| ||  | |||||||  |||||||||||||||||||    
T  67814 tcaacctccctctctggtggcacatcaggaatttcatcaggaaacacttctgggaacccattcactaccggcaacctgttaatcacagcttgattttcta 67715  T
Q  182 acgacaaacatgccattagagaatacatcagaatcccatctcgttc 227  Q
    |||||||   |||||||| ||||||||||||| |||| || |||||    
T  67714 acgacaattgtgccattaaagaatacatcagattcccgtcccgttc 67669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 21133 - 21257
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||| ||| ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  21133 tcggaagctgacatacgataaggtgccatcgacgccggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 21232  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  21233 tttcatctggaaaaacttcaggaaa 21257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 36557 - 36681
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||| |||||    ||| |||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  36557 tcggaagctgacatacgataaggtaccatagacacaagattcattccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 36656  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  36657 tttcatctggaaaaacttcaggaaa 36681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 37595 - 37471
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||||| || ||||||||| ||||| ||||| || || ||||| || ||||| ||||| || |||||  |||    
T  37595 tcggaagctgacatacgataaggtgccatcgacatcggcttcgttccaggtacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaa 37496  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  37495 tttcatctggaaaaacttcaggaaa 37471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 25887 - 25999
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||   ||| ||||| | |||||| || || || ||||| || || || ||||| ||||||||||| || ||||| ||||||||||    
T  25887 gccgacatacggtaaggcgtcatagacacaggcttcgtacccggaacaagatcaatcgaaaattcaacttctctttctggcggcacatcaagaatctcat 25986  T
Q  119 ccggaaaaacttc 131  Q
      |||||||||||    
T  25987 taggaaaaacttc 25999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 13659 - 13544
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| ||  ||||||| || || ||||| || || || ||||| || |||||  |||| |||||||    
T  13659 gacatacgataaggtgccatcgacaccggcttcgttccaggatctagatcaatagaaaactcgacttccctctctggaggcacatcaggaatttcatccg 13560  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  13559 gaaaaacttcaggaaa 13544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 11004 - 10889
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||| || ||  | ||||| || || ||||| || || || ||||| || |||||  |||| |||||||    
T  11004 gacatacgataaggtgccatcgacaccggcttcgtcccaggagcaagatcaatagaaaactcgacttccctctctggaggcacatcaggaatttcatccg 10905  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  10904 gaaaaacttcaggaaa 10889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 31413 - 31537
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||  ||| ||||| || || ||||| || || ||||| || ||||| ||||| || | |||  |||    
T  31413 tcggaagcagacatacgataaggtgccatcgacaccagctttgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcatatcaggaa 31512  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  31513 tttcatctggaaaaacttcaggaaa 31537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 36879 - 37003
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||  ||| ||||| || || ||||| || || ||||| || ||||| ||||| || | |||  |||    
T  36879 tcggaagcagacatacgataaggtgccatcgacaccagctttgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcatatcaggaa 36978  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  36979 tttcatctggaaaaacttcaggaaa 37003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 2953 - 3116
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||||| || | ||| ||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  2953 tcggaagcagacatacgataaggtgccatcgagactggctttgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 3052  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||  ||||||||||||||||| |||  ||||||  ||||||| || ||||| ||||||||    
T  3053 tctcatatggaaaaacttcaggaaattcacacaccaccggtaacctatcaatcactgcttgatt 3116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 16689 - 16813
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  |||    
T  16689 tcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttccctctctggaggcacatcaggaa 16788  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| ||||||||||| |||||    
T  16789 tttcatctggaaaaacttcgggaaa 16813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 17832 - 17717
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||| || || ||||| || || ||||| || ||||| ||||| || |||||  |||||||||| |    
T  17832 gacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaatagaaaactcgacttctctctctggaggcacatcaggaatctcatctg 17733  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||| ||||    
T  17732 gaaaaacttcaagaaa 17717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 8507 - 8353
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| |||||| || || |||||||| || || |||||||| ||||| |||||  | |||||  |||| ||||| |    
T  8507 gacatacgataaggtgccatcgacaccggcttcgtcccaggaactagatcaatagaaaactcaacttctctctctggacgcacatcaggaatttcatctg 8408  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    | |||||||||||||| |||  ||||||| ||| | | || ||||| ||||||||    
T  8407 ggaaaacttcaggaaaatcacacaccacttgtagcttatcaatcactgcttgatt 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 5126 - 5012
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  5126 tcggaagctgacatacgctaaggtaccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 5027  T
Q  113 tctcatccggaaaaa 127  Q
    ||||||| |||||||    
T  5026 tctcatcaggaaaaa 5012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 9557 - 9443
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| |||||||||||| |||||||||||| || || || || || || |||||||| || |||||||| |||||| |||    
T  9557 tcggaagctgacatacgctaaggtaccatcgacaccggcttcgttcctggaacaaggtcaattgaaaattcaacctccctctctggtggcacatctggaa 9458  T
Q  113 tctcatccggaaaaa 127  Q
    ||||||| |||||||    
T  9457 tctcatcaggaaaaa 9443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 358 - 482
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||| |||||| ||||| |||||| ||||||||| || || ||||  || || |||||||| ||||| ||||| || |||||  |||    
T  358 tcggaagctgacatacgctaaggtgccatcaacaccggcttcgttccaggaacaagattaatagaaaactcaacttctctctctggaggcacatcaggaa 457  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  458 tttcatctggaaaaacttcaggaaa 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 5840 - 5647
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| |||||| |||||||||||| ||||| |||||| || || || |  || || |||||||| ||  | | ||| |||||| |||||||||| |    
T  5840 gacatacggtaaggtgccatcgacaccggcttcgctcctggaacaaggtcaagtgaaaattcaacctccctcccagatgggacatctggaatctcatcag 5741  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
     ||||||||  || || |||||||| ||| | |||||||| ||||||||||||||||| || |||||  ||||||| | |||| |||| |||||    
T  5740 aaaaaacttatgggaattcattcacaactggcaacctgtcaatcacagcttgattttccaaggacaagtatgccatcaaagaaaacataagaat 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 49652 - 49489
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||| ||| ||||| || || ||||| || || || |||||||| || |  ||||| |||| | |||    
T  49652 tcggacgccgacatacggtaaggtgccatcgacaccggctttgttccgggcacaagatcaattgaaaattcaacctccctcttcggtggcacatttggaa 49553  T
Q  113 tctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgatt 176  Q
    ||||||| ||||||||||| ||||| ||| |||| ||  | || || || ||||||||||||||    
T  49552 tctcatcaggaaaaacttctggaaattcactcacaaccggcaatctatcaatcacagcttgatt 49489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 51347 - 51474
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    |||||||||||||||||| |||||||||||| ||| ||||  || || |||||||| || || |||||||| || || ||||| |||  | ||||||| |    
T  51347 gccgacatacgataaggtgccatcgacaccggctttgttctgggcacaagatcgattgaaaattcaacctccctctccggtggcacaattggaatctcgt 51446  T
Q  119 ccggaaaaacttcaggaaactcattcac 146  Q
    | ||||||||||| ||||| ||||||||    
T  51447 caggaaaaacttctggaaattcattcac 51474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 15770 - 15645
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||| || || ||||| |  || |||||||| |  || ||||| || |||||  ||    
T  15770 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgttccaggaacaagatcaacagaaaactcaacttacctctctggaggcacatcagga 15671  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||| |||||||||||||||||    
T  15670 atttcatctggaaaaacttcaggaaa 15645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 7786 - 7911
Alignment:
Q  12 ttcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctaga 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||| | || || ||||| || ||||||||||| || || | ||| || |||||  ||    
T  7786 ttcggaagcagacatacgataaggtgccatcgacaccggcttcgtttcaggaacaagatcaatagagaactcaacttccctctttggaggcacatcagga 7885  T
Q  112 atctcatccggaaaaacttcaggaaa 137  Q
    || ||||| || ||||||||||||||    
T  7886 atttcatctgggaaaacttcaggaaa 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 10933 - 10809
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||| || |||||||| || ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  10933 tcggaagcagacatacgataagttttcatcgacatcggcttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcatgaa 10834  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||| ||||||||    
T  10833 tttcatctggaaaaacatcaggaaa 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 12192 - 12316
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||||||||||||||| |||||    |||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||    
T  12192 tcggaagctgacatacgataaggttccatagacacaagtttcgttccaggaacaagatcaatagaaaactcaacttctctctctggaggcacatcaggaa 12291  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  12292 tttcatctggaaaaacttcaggaaa 12316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 335 - 223
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    ||||||||||||||| |||||||||||| ||||||||  || || ||||| || || |||||||   |||| ||||| || |||||  |||| ||||| |    
T  335 gacatacgataaggtgccatcgacaccggcttcgttctaggaacaagatcaatagaaaactcaa---ctctctctggaggcacatcaggaatttcatctg 239  T
Q  122 gaaaaacttcaggaaa 137  Q
    ||||||||||||||||    
T  238 gaaaaacttcaggaaa 223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 420 - 537
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||| ||||||||| ||| ||||| ||||||||||| || || ||||| || || || ||||| ||||||||||| || |||||  |||| |||||      
T  420 gacatatgataaggtttcatagacacagtcttcgttccaggaacaagatcaatagaaaattcaacttctctttctggaggcacatcaggaatttcatcaa 519  T
Q  122 gaaaaacttcaggaaact 139  Q
    |||||||||| |||||||    
T  520 gaaaaacttctggaaact 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 43447 - 43540
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacat 106  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| || || || || || || ||||||||||  || |||||||||||||    
T  43447 tcggaagctgacatacgataaggtgccatcgacaccggcttcgttcccggaacaaggtcaattgaaaactcaaccttcctctctggtggtacat 43540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 1779 - 1683
Alignment:
Q  41 tcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccggaaaaacttcaggaaa 137  Q
    ||||||||| |||||||||||| || ||||| || || ||||| || ||||| ||||| ||||||||   ||| ||||| |||||||||||||||||    
T  1779 tcgacaccggcttcgttcctggaacaagatcaatagaaaactcgacttctctctctggaggtacatcagcaatttcatctggaaaaacttcaggaaa 1683  T

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Target: scaffold0298 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 9875 - 9799
Alignment:
Q  139 tcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaat 215  Q
    |||||||| ||| | |||||||| |||||||||||||| |||||||||||| ||||||| | |||| |||| |||||    
T  9875 tcattcacaactggcaacctgtcaatcacagcttgattctctaacgacaaatatgccatcaaagaaaacattagaat 9799  T

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Target: scaffold0215 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 28270 - 28146
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| |||||||||||| ||| |||||  | || ||||| || || ||||| || ||||| ||| | || |||||  |||    
T  28270 tcggaagcagacatacgataaggtgccatcgacaccggcttagttccatgaacaagatcaatagaaaactcgacttctctctctagaggcacatcaggaa 28171  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  28170 tttcatctggaaaaacttcaggaaa 28146  T

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Target: scaffold0177 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 12131 - 12007
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || |||||||||||||||  ||||||||||  ||||||||| || || ||||| || || ||||| || || || ||||| || |||||  |||    
T  12131 tcggaagcagacatacgataaggtgtcatcgacaccagcttcgttccagggacaagatcaatagaaaactcgacttccctctctggaggcacatccggaa 12032  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| |||||||||||||||||    
T  12031 tttcatctggaaaaacttcaggaaa 12007  T

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Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 111673 - 111558
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||| ||||||  ||| ||||| | |||||||||||| || ||||| || || |||||||| ||||||||||| || |||||  |||| ||||  |    
T  111673 gacatacggtaaggtgtcatagacacaggcttcgttcctggaacaagatcaatcgaaaactcaacttctctttctggaggcacatcaggaatttcattag 111574  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||||||| |||||    
T  111573 gaaaaacttctggaaa 111558  T

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Target: scaffold1881 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 1172 - 1048
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaa 112  Q
    ||||| || ||||||||||||||| ||||| |||||| ||||||||| || || | ||| || || ||||| || || |||| ||| || |||||  |||    
T  1172 tcggaagcagacatacgataaggtgccatcaacaccggcttcgttccagggacaaaatcaatagaaaactcgacttccctttttggaggcacatcaggaa 1073  T
Q  113 tctcatccggaaaaacttcaggaaa 137  Q
    | ||||| || ||||||||||||||    
T  1072 tttcatctgggaaaacttcaggaaa 1048  T

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Target: scaffold0138 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 6853 - 6641
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||  ||||||  ||| ||||| | ||||||||| || || || || || ||||||||||| ||||||||| | || |||||  |||| ||||| |    
T  6853 gacatacagtaaggtgtcatagacacaggcttcgttcccggaacaaggtcaatcgagaactcaacttctctttctagaggcacatcaggaatttcatcag 6754  T
Q  122 gaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaaacatgccattagagaatacatcagaatcccatc 221  Q
    |||||||||| ||||| ||    |||||  ||||| | || ||||| |||||||| || |  |||||  ||||||||| |||| |||||| ||| |||||    
T  6753 gaaaaacttctggaaaatcgcataccacctgtaacttatcaatcactgcttgattctcaatagacaaggatgccattaaagaaaacatcaaaattccatc 6654  T
Q  222 tcgttctagctgc 234  Q
     ||||||| ||||    
T  6653 acgttctaactgc 6641  T

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Target: scaffold0312 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 599 - 714
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| ||||| | ||||||||| || || ||||| || || |||||||| ||||| ||||| || |||||  |||| ||||| |    
T  599 gacatacgataaggtgtcatagacacaggcttcgttccaggaacaagatcaatcgaaaactcaacttctctctctggaggcacatcaggaatttcatcag 698  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||| ||| |||||    
T  699 gaaaaatttctggaaa 714  T

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Target: scaffold0130 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 4658 - 4531
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| |||||  |||||||||| | |||||| ||  | || ||||| || || || ||||| || |||||||| || |||||  |||||||||    
T  4658 gccgacatacggtaaggcgccatcgacacaggcttcgtacccagaacaagatcaattgaaaattcaacttccctttctggcggcacatcaggaatctcat 4559  T
Q  119 ccggaaaaacttcaggaaactcattcac 146  Q
    |  |||||||||| ||||| ||||||||    
T  4558 catgaaaaacttctggaaattcattcac 4531  T

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Target: scaffold0084 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 7761 - 7876
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| ||||| | ||||||||| || || ||||| || || || ||||| ||||| ||||| || |||||  |||| ||||| |    
T  7761 gacatacgataaggtgtcatagacacaggcttcgttccaggaacaagatcaatagaaaattcaacttctctctctggaggcacatcaggaatttcatcag 7860  T
Q  122 gaaaaacttcaggaaa 137  Q
    |||||||||| |||||    
T  7861 gaaaaacttctggaaa 7876  T

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Target: scaffold0379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 5658 - 5540
Alignment:
Q  19 gccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcat 118  Q
    ||||||||||| ||||||  ||| ||||| | ||| |||||||| || ||||| || || || || || ||||||||||| || |||||  |||||||||    
T  5658 gccgacatacggtaaggtgtcatagacacaggctttgttcctggaacaagatcaatcgaaaattcgacttctctttctggcggcacatcaggaatctcat 5559  T
Q  119 ccggaaaaacttcaggaaa 137  Q
    | || |||||||| |||||    
T  5558 cagggaaaacttctggaaa 5540  T

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Target: scaffold0405 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 1040 - 1077
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcc 59  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  1040 gacatacgataaggtgccatcgacaccggcttcgttcc 1077  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 4935 - 4850
Alignment:
Q  103 acatctagaatctcatccggaaaaacttcaggaaactcattcaccactagtaacctgtcgatcacagcttgattttctaacgacaa 188  Q
    |||||| |||||||||| |||||||||||  |||| |||||||| ||  | || || || |||||||||||||| || ||||||||    
T  4935 acatctggaatctcatcaggaaaaacttctagaaattcattcacaaccggcaatctatcaatcacagcttgattctccaacgacaa 4850  T

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Target: scaffold0181 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 29691 - 29618
Alignment:
Q  13 tcggatgccgacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaac 86  Q
    ||||| || ||||||||||||||| ||||||||||||  |||||||| || || ||||| || || ||||||||    
T  29691 tcggaagcagacatacgataaggtgccatcgacaccgatttcgttccaggaacaagatcaatagaaaactcaac 29618  T

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Target: scaffold0575 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 4121 - 4229
Alignment:
Q  22 gacatacgataaggttccatcgacaccgtcttcgttcctggtactagatcgatggagaactcaacctctctttctggtggtacatctagaatctcatccg 121  Q
    |||||||||||||||  ||| |||||   ||||||||| || || ||||| || || || ||||| ||||||||||| || |||||  |||| ||||| |    
T  4121 gacatacgataaggtgtcatagacacaagcttcgttcccggaacaagatcaatcgaaaattcaacttctctttctggaggcacatcaggaatttcatcag 4220  T
Q  122 gaaaaactt 130  Q
    |||||||||    
T  4221 gaaaaactt 4229  T

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