View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0769_low_36 (Length: 286)
Name: NF0769_low_36
Description: NF0769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0769_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 82 - 283
Target Start/End: Original strand, 41004616 - 41004817
Alignment:
| Q |
82 |
ttcgcaccgtcgttgaaaacggtacctcacgtttcatctccttcgtcgacggcgatccctccgttaaatctctactttcccgtcttgaccttgccggtaa |
181 |
Q |
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| T |
41004616 |
ttcgcaccgtcgttgaaaacggtacctcacgtttcatctcctttgtcgacggcgatccctccgttaaatctctactttcccgtcttgaccttgccggtaa |
41004715 |
T |
|
| Q |
182 |
cgccgttaacgctgctaattatcaacaccgtcaacgttcttctcagtttcatccttctccagctgctcttcgccgtcgtcgtccttttcttcatctcact |
281 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41004716 |
cgccgttaacgctgctaattatcaacaccgtcaacgttcttctcagtttcatccttctccagctgctcttcgccgtcgtcgtccttttcttcatctcact |
41004815 |
T |
|
| Q |
282 |
cg |
283 |
Q |
| |
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|| |
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| T |
41004816 |
cg |
41004817 |
T |
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