View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0769_low_46 (Length: 251)
Name: NF0769_low_46
Description: NF0769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0769_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34672485 - 34672325
Alignment:
| Q |
1 |
aggattttgagggatgcatgatatatggtagtgtttgcattgataatgagtatgaaatgggattgatgtaaatttggttttggtgtgtgcatgtatgcat |
100 |
Q |
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| T |
34672485 |
aggattttgagggatgcatgatatatggtagtgtttgcattgataatgagtatgaaatgggattgatgtaaatttggttttggtgtgtgcatgtatgcat |
34672386 |
T |
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| Q |
101 |
gatgatggattggaaattttggtagattgtgaatgaattgtgtaaagataggatgatgatg |
161 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34672385 |
gatgatggattggaaattttggtagattgtgaatgaattgtgtaaagataggatgatgatg |
34672325 |
T |
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