View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0770_high_14 (Length: 205)
Name: NF0770_high_14
Description: NF0770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0770_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 6693202 - 6693334
Alignment:
| Q |
1 |
agaattacaccaaacactcacttttaaagaaattttgaatattcttaactgttagtattggagcatcctatctctacaaaagagggcggaaaaagaagtc |
100 |
Q |
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| T |
6693202 |
agaattacaccaaacactcacttttaaagaaattttgaatattcttaactgttagtattggagcatcctatctctacaaaagagggcggaaaaagaagtc |
6693301 |
T |
|
| Q |
101 |
gaaaaaactatacctcagtcctggccatctctg |
133 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
6693302 |
gaaaaaactatacctcagtcctggccatctctg |
6693334 |
T |
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