View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0770_low_11 (Length: 316)
Name: NF0770_low_11
Description: NF0770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0770_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 44 - 229
Target Start/End: Complemental strand, 38426894 - 38426709
Alignment:
| Q |
44 |
agacccaaaaatcaattttacggagcaagagcctatcaagacaaccgctgacaaatttttgggatcagttaaagaaaatttatcaccacatgatatgaag |
143 |
Q |
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| T |
38426894 |
agacccaaaaatcaattttacggagcaagagcctatcaagacaaccgctgacaaatttttgggatcagttaaagaaaatttatcaccacatgatatgaag |
38426795 |
T |
|
| Q |
144 |
cgactagaggcttatgttgacaatcttgctgactttcatctggtaatttctcaaatgatggataccattctttttacttgatgatg |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38426794 |
cgactagaggcttatgttgacaatcttgctgactttcatctggtaatttctcaaatgatggataccattctttttacttgatgatg |
38426709 |
T |
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