View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0770_low_21 (Length: 253)

Name: NF0770_low_21
Description: NF0770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0770_low_21
NF0770_low_21
[»] chr8 (55 HSPs)
chr8 (12-253)||(21399554-21399798)
chr8 (12-253)||(21794047-21794291)
chr8 (41-253)||(18834263-18834474)
chr8 (36-160)||(22610262-22610386)
chr8 (37-160)||(23884101-23884225)
chr8 (156-253)||(1485134-1485232)
chr8 (156-253)||(5852624-5852722)
chr8 (156-253)||(14408776-14408874)
chr8 (156-253)||(4541702-4541801)
chr8 (156-253)||(14824508-14824606)
chr8 (33-145)||(18816287-18816401)
chr8 (156-253)||(20045527-20045625)
chr8 (156-253)||(23914716-23914814)
chr8 (154-253)||(45289877-45289977)
chr8 (37-112)||(22345145-22345220)
chr8 (37-112)||(22356805-22356880)
chr8 (156-253)||(4484012-4484110)
chr8 (154-253)||(24485370-24485470)
chr8 (156-253)||(4380954-4381051)
chr8 (41-145)||(21514637-21514743)
chr8 (159-253)||(18816643-18816738)
chr8 (156-253)||(18677394-18677492)
chr8 (160-253)||(22258469-22258563)
chr8 (154-253)||(22002487-22002587)
chr8 (37-104)||(22208258-22208325)
chr8 (40-141)||(36732411-36732514)
chr8 (40-145)||(4380616-4380723)
chr8 (45-106)||(22483773-22483834)
chr8 (2-71)||(45469180-45469249)
chr8 (37-160)||(36305936-36306053)
chr8 (41-104)||(22258306-22258369)
chr8 (17-71)||(6101729-6101783)
chr8 (38-149)||(21676590-21676701)
chr8 (40-144)||(12577826-12577932)
chr8 (19-71)||(36727016-36727068)
chr8 (36-153)||(21678841-21678958)
chr8 (36-107)||(22483924-22483994)
chr8 (154-253)||(22474550-22474650)
chr8 (11-71)||(23899957-23900017)
chr8 (36-79)||(21676495-21676537)
chr8 (34-89)||(22532125-22532180)
chr8 (34-89)||(22536810-22536865)
chr8 (52-106)||(18023567-18023621)
chr8 (152-253)||(23883741-23883843)
chr8 (52-106)||(38184923-38184977)
chr8 (18-111)||(17906826-17906919)
chr8 (154-253)||(17978574-17978674)
chr8 (154-253)||(22208062-22208162)
chr8 (154-253)||(38989247-38989347)
chr8 (154-253)||(39020344-39020444)
chr8 (190-253)||(6101949-6102012)
chr8 (106-160)||(36732549-36732604)
chr8 (37-71)||(20022036-20022070)
chr8 (33-71)||(31722485-31722523)
chr8 (36-112)||(20397505-20397581)
[»] chr7 (78 HSPs)
chr7 (37-253)||(58409-58626)
chr7 (34-253)||(15720615-15720838)
chr7 (37-160)||(13744506-13744629)
chr7 (34-157)||(36300634-36300757)
chr7 (37-160)||(8930761-8930887)
chr7 (36-160)||(33556100-33556225)
chr7 (37-158)||(15700731-15700852)
chr7 (36-160)||(18570577-18570704)
chr7 (41-160)||(25943199-25943319)
chr7 (156-253)||(15376045-15376143)
chr7 (156-253)||(20384455-20384553)
chr7 (37-126)||(13315078-13315167)
chr7 (156-253)||(457054-457153)
chr7 (156-253)||(4691056-4691154)
chr7 (156-253)||(13870078-13870176)
chr7 (33-145)||(15575641-15575755)
chr7 (156-253)||(16410792-16410890)
chr7 (156-253)||(16580453-16580551)
chr7 (156-253)||(27217594-27217692)
chr7 (34-149)||(47095394-47095511)
chr7 (154-253)||(32126223-32126323)
chr7 (160-253)||(14161020-14161114)
chr7 (156-253)||(18431445-18431543)
chr7 (156-253)||(18628298-18628396)
chr7 (156-253)||(18641004-18641102)
chr7 (156-253)||(20484812-20484910)
chr7 (33-145)||(18874657-18874770)
chr7 (33-141)||(708421-708531)
chr7 (156-253)||(16233254-16233352)
chr7 (156-253)||(16460153-16460251)
chr7 (33-141)||(20252174-20252284)
chr7 (156-253)||(45846986-45847084)
chr7 (40-145)||(48212726-48212835)
chr7 (37-141)||(19195562-19195667)
chr7 (154-253)||(41523652-41523752)
chr7 (154-253)||(41526114-41526214)
chr7 (159-253)||(15575997-15576092)
chr7 (40-145)||(43745602-43745709)
chr7 (156-253)||(20488173-20488271)
chr7 (156-237)||(26355311-26355393)
chr7 (156-237)||(26357763-26357845)
chr7 (154-253)||(14948449-14948549)
chr7 (159-237)||(43745221-43745300)
chr7 (37-103)||(38299738-38299804)
chr7 (156-253)||(18875009-18875105)
chr7 (2-71)||(48807286-48807355)
chr7 (40-104)||(8488093-8488157)
chr7 (40-104)||(8513752-8513816)
chr7 (154-253)||(24702964-24703064)
chr7 (154-253)||(24705411-24705511)
chr7 (156-241)||(11392632-11392716)
chr7 (2-71)||(14218856-14218925)
chr7 (45-106)||(15700887-15700948)
chr7 (154-253)||(8513913-8514013)
chr7 (33-94)||(3287743-3287804)
chr7 (38-106)||(16250219-16250287)
chr7 (2-71)||(16078352-16078421)
chr7 (41-94)||(43276744-43276797)
chr7 (154-253)||(14317866-14317966)
chr7 (40-145)||(4690662-4690769)
chr7 (176-253)||(3192393-3192470)
chr7 (152-236)||(8931145-8931230)
chr7 (41-107)||(19283040-19283108)
chr7 (154-253)||(9743237-9743337)
chr7 (37-111)||(12127159-12127233)
chr7 (33-71)||(20586374-20586412)
chr7 (152-253)||(33556445-33556547)
chr7 (156-253)||(48213107-48213205)
chr7 (159-253)||(13315446-13315541)
chr7 (52-106)||(831861-831915)
chr7 (52-106)||(1197041-1197095)
chr7 (36-66)||(16186930-16186960)
chr7 (37-111)||(20214129-20214203)
chr7 (160-253)||(34958015-34958109)
chr7 (18-71)||(4071842-4071895)
chr7 (18-71)||(35771418-35771471)
chr7 (117-145)||(16186859-16186887)
chr7 (36-112)||(24269942-24270018)
[»] chr3 (70 HSPs)
chr3 (19-251)||(14442013-14442249)
chr3 (41-250)||(17684835-17685048)
chr3 (41-253)||(54875474-54875691)
chr3 (37-253)||(6159241-6159461)
chr3 (41-250)||(17669698-17669911)
chr3 (33-253)||(2841498-2841722)
chr3 (33-253)||(6156547-6156770)
chr3 (38-146)||(3527154-3527262)
chr3 (11-145)||(17208470-17208606)
chr3 (40-145)||(24548953-24549057)
chr3 (156-253)||(6468466-6468564)
chr3 (33-149)||(14520388-14520506)
chr3 (156-253)||(17463910-17464008)
chr3 (156-253)||(34160058-34160156)
chr3 (156-253)||(45577773-45577871)
chr3 (36-160)||(22841274-22841405)
chr3 (53-149)||(50755266-50755365)
chr3 (154-253)||(13151118-13151218)
chr3 (154-253)||(13153586-13153686)
chr3 (156-253)||(10541619-10541717)
chr3 (156-253)||(15413163-15413261)
chr3 (156-253)||(17208133-17208231)
chr3 (40-145)||(24547146-24547253)
chr3 (156-253)||(55477224-55477322)
chr3 (156-253)||(14520055-14520153)
chr3 (156-253)||(45606237-45606335)
chr3 (156-253)||(14671617-14671716)
chr3 (156-253)||(10247054-10247152)
chr3 (154-253)||(14508640-14508740)
chr3 (36-107)||(12917301-12917372)
chr3 (156-253)||(15978267-15978365)
chr3 (154-253)||(5215440-5215540)
chr3 (154-253)||(7780675-7780775)
chr3 (154-253)||(14152558-14152658)
chr3 (154-253)||(16453605-16453704)
chr3 (154-253)||(28847949-28848049)
chr3 (154-253)||(54330465-54330565)
chr3 (37-104)||(14641544-14641611)
chr3 (37-145)||(29907584-29907695)
chr3 (37-145)||(29948750-29948861)
chr3 (37-145)||(29997904-29998015)
chr3 (36-106)||(45803326-45803396)
chr3 (40-104)||(14152398-14152462)
chr3 (33-104)||(5215636-5215707)
chr3 (152-253)||(3527533-3527635)
chr3 (36-153)||(3160622-3160740)
chr3 (89-146)||(13522326-13522386)
chr3 (18-111)||(16050909-16051002)
chr3 (33-89)||(19568200-19568256)
chr3 (37-150)||(50350812-50350929)
chr3 (52-106)||(2247877-2247931)
chr3 (33-71)||(13185917-13185955)
chr3 (33-71)||(40808018-40808056)
chr3 (33-71)||(40812855-40812893)
chr3 (33-71)||(44274440-44274478)
chr3 (195-233)||(45471771-45471809)
chr3 (154-253)||(53646217-53646317)
chr3 (37-104)||(15566733-15566800)
chr3 (190-253)||(22306779-22306842)
chr3 (190-253)||(25104291-25104354)
chr3 (214-253)||(45471727-45471766)
chr3 (159-253)||(48043862-48043957)
chr3 (33-71)||(5200235-5200273)
chr3 (33-71)||(10563730-10563768)
chr3 (160-253)||(25201709-25201803)
chr3 (37-79)||(25202149-25202190)
chr3 (33-71)||(33565109-33565147)
chr3 (33-71)||(35960920-35960958)
chr3 (176-253)||(12917715-12917792)
chr3 (117-153)||(12155102-12155138)
[»] scaffold0098 (1 HSPs)
scaffold0098 (33-253)||(39943-40167)
[»] chr1 (41 HSPs)
chr1 (36-253)||(20588472-20588695)
chr1 (36-253)||(20593010-20593233)
chr1 (36-160)||(34392698-34392825)
chr1 (37-160)||(45499472-45499598)
chr1 (37-144)||(8306552-8306662)
chr1 (156-253)||(13989598-13989696)
chr1 (156-253)||(21474416-21474515)
chr1 (156-253)||(14237773-14237871)
chr1 (154-253)||(51083009-51083110)
chr1 (154-253)||(23593060-23593161)
chr1 (37-145)||(28476730-28476840)
chr1 (156-253)||(16362651-16362750)
chr1 (156-249)||(24719855-24719949)
chr1 (156-253)||(41373206-41373304)
chr1 (154-253)||(4596004-4596104)
chr1 (154-253)||(21922619-21922719)
chr1 (37-145)||(12710813-12710923)
chr1 (37-123)||(35895069-35895155)
chr1 (44-149)||(24719514-24719620)
chr1 (33-104)||(50544861-50544932)
chr1 (37-129)||(38056668-38056762)
chr1 (39-107)||(17901792-17901860)
chr1 (38-101)||(635001-635064)
chr1 (2-71)||(13302924-13302993)
chr1 (40-144)||(24007224-24007330)
chr1 (154-253)||(21841501-21841603)
chr1 (41-104)||(22145666-22145729)
chr1 (16-89)||(21239024-21239097)
chr1 (39-107)||(6834162-6834230)
chr1 (36-75)||(7703140-7703179)
chr1 (33-89)||(7051914-7051970)
chr1 (40-104)||(8275988-8276052)
chr1 (34-89)||(24723344-24723399)
chr1 (40-105)||(51336467-51336532)
chr1 (41-109)||(16401897-16401963)
chr1 (36-112)||(21168914-21168990)
chr1 (33-71)||(4595845-4595883)
chr1 (33-71)||(42913071-42913109)
chr1 (40-105)||(12327742-12327807)
chr1 (154-253)||(44892242-44892343)
chr1 (117-153)||(21188111-21188147)
[»] chr5 (36 HSPs)
chr5 (37-253)||(32607312-32607534)
chr5 (37-158)||(21398640-21398764)
chr5 (2-145)||(18744820-18744965)
chr5 (156-253)||(18744441-18744539)
chr5 (156-253)||(39245868-39245966)
chr5 (156-253)||(23199553-23199651)
chr5 (156-253)||(38620168-38620266)
chr5 (154-253)||(29346713-29346813)
chr5 (154-253)||(29349186-29349286)
chr5 (154-253)||(29351659-29351759)
chr5 (36-141)||(16063701-16063808)
chr5 (156-253)||(39364116-39364214)
chr5 (154-253)||(264098-264197)
chr5 (156-253)||(23065248-23065346)
chr5 (41-145)||(23199207-23199313)
chr5 (2-141)||(6551251-6551392)
chr5 (154-253)||(10732267-10732367)
chr5 (154-253)||(42244692-42244792)
chr5 (45-145)||(1627071-1627174)
chr5 (40-145)||(660736-660841)
chr5 (46-112)||(31621957-31622023)
chr5 (154-253)||(20909745-20909846)
chr5 (2-71)||(21617889-21617958)
chr5 (94-158)||(22111911-22111977)
chr5 (176-229)||(660287-660340)
chr5 (18-71)||(20469153-20469206)
chr5 (154-253)||(14025965-14026065)
chr5 (36-107)||(20313263-20313332)
chr5 (117-149)||(21504082-21504114)
chr5 (37-112)||(31622098-31622173)
chr5 (37-71)||(21300040-21300074)
chr5 (34-71)||(20566568-20566605)
chr5 (176-253)||(21503712-21503789)
chr5 (154-253)||(8504046-8504146)
chr5 (154-253)||(8833364-8833464)
chr5 (41-105)||(36508633-36508697)
[»] chr4 (50 HSPs)
chr4 (38-253)||(55583032-55583251)
chr4 (34-160)||(9622419-9622548)
chr4 (37-126)||(10273350-10273439)
chr4 (156-253)||(7640518-7640616)
chr4 (33-145)||(14631081-14631195)
chr4 (156-253)||(15117684-15117782)
chr4 (156-253)||(18238944-18239042)
chr4 (154-253)||(3485701-3485801)
chr4 (154-253)||(12033101-12033201)
chr4 (154-253)||(25030997-25031097)
chr4 (156-253)||(2424782-2424880)
chr4 (156-253)||(19243435-19243533)
chr4 (37-145)||(25513797-25513907)
chr4 (156-253)||(44772415-44772513)
chr4 (156-253)||(18022845-18022944)
chr4 (156-241)||(1836850-1836936)
chr4 (154-250)||(14873415-14873512)
chr4 (33-132)||(16296897-16296998)
chr4 (154-253)||(29268088-29268188)
chr4 (154-253)||(44616023-44616123)
chr4 (154-253)||(50221668-50221767)
chr4 (40-145)||(26446153-26446260)
chr4 (184-253)||(26445677-26445746)
chr4 (154-253)||(14718042-14718142)
chr4 (85-144)||(16296819-16296881)
chr4 (37-104)||(9638999-9639066)
chr4 (27-94)||(13847200-13847267)
chr4 (41-104)||(12424290-12424355)
chr4 (47-141)||(35660906-35661002)
chr4 (41-104)||(33186892-33186955)
chr4 (35-104)||(15239810-15239879)
chr4 (40-144)||(2424386-2424492)
chr4 (33-89)||(19434551-19434607)
chr4 (154-253)||(19566076-19566176)
chr4 (154-253)||(33186696-33186796)
chr4 (154-253)||(44023761-44023861)
chr4 (33-71)||(15115244-15115282)
chr4 (33-111)||(37019652-37019730)
chr4 (154-253)||(12424451-12424551)
chr4 (12-111)||(15613072-15613171)
chr4 (33-71)||(9924176-9924214)
chr4 (33-71)||(14549782-14549820)
chr4 (52-106)||(17143009-17143063)
chr4 (176-253)||(10273196-10273273)
chr4 (117-150)||(14477573-14477606)
chr4 (154-206)||(25513583-25513636)
chr4 (113-150)||(45314157-45314194)
chr4 (154-206)||(46741040-46741093)
chr4 (154-253)||(11478768-11478868)
chr4 (154-253)||(33243452-33243552)
[»] chr6 (40 HSPs)
chr6 (37-160)||(10446147-10446273)
chr6 (156-253)||(18333924-18334022)
chr6 (156-253)||(19858254-19858352)
chr6 (156-253)||(24423279-24423377)
chr6 (156-253)||(26923777-26923875)
chr6 (156-253)||(33865010-33865108)
chr6 (156-253)||(2290510-2290609)
chr6 (156-253)||(22782960-22783058)
chr6 (154-253)||(1540241-1540341)
chr6 (154-253)||(21686329-21686429)
chr6 (154-253)||(12743052-12743152)
chr6 (154-253)||(17882825-17882925)
chr6 (154-253)||(23656133-23656233)
chr6 (156-241)||(8055775-8055861)
chr6 (154-253)||(17318281-17318381)
chr6 (154-253)||(33862529-33862629)
chr6 (40-136)||(21683074-21683171)
chr6 (39-107)||(29045257-29045325)
chr6 (37-104)||(23658078-23658145)
chr6 (37-129)||(19825482-19825576)
chr6 (117-160)||(1818884-1818927)
chr6 (40-145)||(15998835-15998942)
chr6 (41-145)||(20410512-20410616)
chr6 (34-104)||(18982561-18982631)
chr6 (2-59)||(23501706-23501763)
chr6 (33-111)||(15890704-15890782)
chr6 (176-253)||(17856773-17856850)
chr6 (37-139)||(34140452-34140554)
chr6 (156-218)||(2077072-2077135)
chr6 (37-79)||(34153068-34153109)
chr6 (154-253)||(18928518-18928618)
chr6 (154-253)||(22557042-22557142)
chr6 (34-89)||(28948579-28948634)
chr6 (154-236)||(31734518-31734601)
chr6 (152-237)||(10445807-10445893)
chr6 (19-89)||(18585809-18585879)
chr6 (37-102)||(13285739-13285804)
chr6 (113-150)||(25601401-25601438)
chr6 (154-253)||(18455231-18455331)
chr6 (35-71)||(24267871-24267907)
[»] chr2 (48 HSPs)
chr2 (38-160)||(28344985-28345107)
chr2 (37-112)||(23801477-23801552)
chr2 (156-253)||(18809675-18809773)
chr2 (156-253)||(23711345-23711443)
chr2 (156-253)||(26506111-26506209)
chr2 (156-253)||(27920096-27920194)
chr2 (37-144)||(149497-149610)
chr2 (154-253)||(38968212-38968312)
chr2 (156-253)||(39683047-39683146)
chr2 (156-253)||(21315823-21315921)
chr2 (33-145)||(21335258-21335372)
chr2 (156-253)||(21368901-21368999)
chr2 (156-253)||(23131594-23131692)
chr2 (156-253)||(23134061-23134159)
chr2 (156-253)||(26508589-26508687)
chr2 (156-253)||(32038829-32038927)
chr2 (33-139)||(21315468-21315576)
chr2 (154-253)||(24897525-24897625)
chr2 (154-253)||(24904962-24905062)
chr2 (156-253)||(34401854-34401952)
chr2 (154-253)||(572130-572230)
chr2 (154-253)||(24900008-24900108)
chr2 (154-253)||(24902485-24902585)
chr2 (154-253)||(24907437-24907537)
chr2 (156-253)||(9785375-9785473)
chr2 (156-253)||(21335613-21335711)
chr2 (37-145)||(21369239-21369349)
chr2 (154-253)||(23136300-23136400)
chr2 (156-253)||(22690472-22690569)
chr2 (156-253)||(22695068-22695165)
chr2 (40-145)||(23610572-23610679)
chr2 (176-253)||(22686683-22686760)
chr2 (168-253)||(23610268-23610354)
chr2 (159-253)||(28577831-28577932)
chr2 (2-71)||(3539859-3539928)
chr2 (91-160)||(25584161-25584233)
chr2 (40-160)||(34491239-34491364)
chr2 (33-111)||(24516168-24516246)
chr2 (19-150)||(28652530-28652663)
chr2 (34-107)||(36734444-36734515)
chr2 (33-71)||(27852690-27852728)
chr2 (41-111)||(2523747-2523817)
chr2 (37-71)||(17307508-17307542)
chr2 (37-71)||(22501993-22502027)
chr2 (37-71)||(22509927-22509961)
chr2 (37-71)||(25142226-25142260)
chr2 (40-89)||(357885-357934)
chr2 (2-59)||(18387704-18387761)
[»] scaffold0031 (2 HSPs)
scaffold0031 (37-160)||(127339-127465)
scaffold0031 (152-253)||(127722-127824)
[»] scaffold0174 (3 HSPs)
scaffold0174 (37-158)||(19789-19912)
scaffold0174 (37-102)||(5445-5510)
scaffold0174 (41-106)||(11603-11668)
[»] scaffold0379 (1 HSPs)
scaffold0379 (41-158)||(10881-10999)
[»] scaffold0004 (4 HSPs)
scaffold0004 (37-160)||(75867-75993)
scaffold0004 (41-160)||(73017-73139)
scaffold0004 (2-106)||(111347-111451)
scaffold0004 (39-107)||(66070-66138)
[»] scaffold0555 (1 HSPs)
scaffold0555 (37-146)||(8742-8854)
[»] scaffold0414 (2 HSPs)
scaffold0414 (41-145)||(11160-11267)
scaffold0414 (156-253)||(11508-11606)
[»] scaffold0231 (2 HSPs)
scaffold0231 (2-145)||(17482-17627)
scaffold0231 (176-241)||(11811-11876)
[»] scaffold1186 (1 HSPs)
scaffold1186 (33-145)||(1966-2080)
[»] scaffold0878 (2 HSPs)
scaffold0878 (37-145)||(3418-3528)
scaffold0878 (176-253)||(3927-4004)
[»] scaffold0134 (1 HSPs)
scaffold0134 (156-253)||(38554-38652)
[»] scaffold0023 (1 HSPs)
scaffold0023 (156-253)||(95143-95241)
[»] scaffold0005 (1 HSPs)
scaffold0005 (33-145)||(186188-186302)
[»] scaffold0444 (1 HSPs)
scaffold0444 (154-253)||(14126-14226)
[»] scaffold0109 (2 HSPs)
scaffold0109 (154-253)||(5438-5538)
scaffold0109 (154-253)||(135-235)
[»] scaffold0032 (2 HSPs)
scaffold0032 (156-253)||(62198-62296)
scaffold0032 (37-145)||(61844-61957)
[»] scaffold0029 (1 HSPs)
scaffold0029 (156-253)||(12022-12120)
[»] scaffold0730 (1 HSPs)
scaffold0730 (37-126)||(6501-6590)
[»] scaffold0546 (1 HSPs)
scaffold0546 (154-253)||(7769-7869)
[»] scaffold0254 (1 HSPs)
scaffold0254 (154-253)||(21483-21583)
[»] scaffold0369 (2 HSPs)
scaffold0369 (37-145)||(15612-15721)
scaffold0369 (176-253)||(16120-16197)
[»] scaffold0203 (2 HSPs)
scaffold0203 (156-253)||(18287-18385)
scaffold0203 (37-145)||(17936-18046)
[»] scaffold0146 (1 HSPs)
scaffold0146 (156-253)||(22821-22919)
[»] scaffold0063 (2 HSPs)
scaffold0063 (156-253)||(39070-39168)
scaffold0063 (154-227)||(62538-62612)
[»] scaffold0048 (1 HSPs)
scaffold0048 (34-112)||(68719-68797)
[»] scaffold0232 (1 HSPs)
scaffold0232 (156-251)||(4064-4160)
[»] scaffold0044 (1 HSPs)
scaffold0044 (154-253)||(41132-41232)
[»] scaffold0695 (1 HSPs)
scaffold0695 (156-253)||(6677-6775)
[»] scaffold0676 (2 HSPs)
scaffold0676 (37-141)||(2831-2937)
scaffold0676 (85-144)||(2762-2824)
[»] scaffold0630 (1 HSPs)
scaffold0630 (154-251)||(8859-8957)
[»] scaffold0040 (2 HSPs)
scaffold0040 (156-253)||(13151-13249)
scaffold0040 (33-88)||(106043-106098)
[»] scaffold0230 (2 HSPs)
scaffold0230 (154-253)||(14682-14782)
scaffold0230 (19-89)||(6663-6733)
[»] scaffold0028 (6 HSPs)
scaffold0028 (154-253)||(134945-135045)
scaffold0028 (154-253)||(137414-137514)
scaffold0028 (154-253)||(139883-139983)
scaffold0028 (154-253)||(142352-142452)
scaffold0028 (154-253)||(144821-144921)
scaffold0028 (19-59)||(3030-3070)
[»] scaffold0056 (2 HSPs)
scaffold0056 (40-145)||(18221-18328)
scaffold0056 (2-71)||(67143-67212)
[»] scaffold0247 (1 HSPs)
scaffold0247 (41-160)||(1008-1128)
[»] scaffold0108 (3 HSPs)
scaffold0108 (154-253)||(6210-6310)
scaffold0108 (198-253)||(6987-7042)
scaffold0108 (34-103)||(6408-6477)
[»] scaffold0086 (1 HSPs)
scaffold0086 (36-107)||(35181-35252)
[»] scaffold0594 (1 HSPs)
scaffold0594 (36-106)||(2234-2304)
[»] scaffold0575 (1 HSPs)
scaffold0575 (156-253)||(5488-5585)
[»] scaffold0148 (1 HSPs)
scaffold0148 (37-141)||(8792-8900)
[»] scaffold0853 (1 HSPs)
scaffold0853 (41-145)||(2454-2562)
[»] scaffold0516 (2 HSPs)
scaffold0516 (178-253)||(7804-7879)
scaffold0516 (40-145)||(5304-5411)
[»] scaffold0220 (1 HSPs)
scaffold0220 (37-104)||(13938-14005)
[»] scaffold0061 (2 HSPs)
scaffold0061 (37-141)||(14582-14689)
scaffold0061 (37-141)||(23640-23747)
[»] scaffold0439 (2 HSPs)
scaffold0439 (71-160)||(12241-12333)
scaffold0439 (164-253)||(4215-4305)
[»] scaffold0505 (1 HSPs)
scaffold0505 (41-150)||(4877-4988)
[»] scaffold0207 (1 HSPs)
scaffold0207 (11-71)||(13362-13422)
[»] scaffold0139 (2 HSPs)
scaffold0139 (40-100)||(23527-23587)
scaffold0139 (36-144)||(40156-40268)
[»] scaffold0431 (2 HSPs)
scaffold0431 (41-104)||(5620-5685)
scaffold0431 (154-253)||(5424-5524)
[»] scaffold0017 (1 HSPs)
scaffold0017 (34-150)||(26668-26786)
[»] scaffold0007 (2 HSPs)
scaffold0007 (34-145)||(16412-16526)
scaffold0007 (36-94)||(18696-18754)
[»] scaffold0162 (3 HSPs)
scaffold0162 (156-253)||(24227-24322)
scaffold0162 (116-145)||(23959-23988)
scaffold0162 (42-74)||(23893-23925)
[»] scaffold0454 (1 HSPs)
scaffold0454 (154-253)||(313-415)
[»] scaffold0363 (1 HSPs)
scaffold0363 (154-253)||(9976-10078)
[»] scaffold0411 (1 HSPs)
scaffold0411 (14-59)||(13390-13435)
[»] scaffold0328 (1 HSPs)
scaffold0328 (37-82)||(18636-18681)
[»] scaffold0213 (1 HSPs)
scaffold0213 (37-144)||(19154-19263)
[»] scaffold0026 (1 HSPs)
scaffold0026 (2-71)||(146745-146814)
[»] scaffold0461 (1 HSPs)
scaffold0461 (113-160)||(12417-12464)
[»] scaffold0149 (2 HSPs)
scaffold0149 (33-88)||(21616-21671)
scaffold0149 (33-71)||(29565-29603)
[»] scaffold0035 (2 HSPs)
scaffold0035 (36-107)||(43782-43851)
scaffold0035 (36-79)||(39090-39132)
[»] scaffold1941 (1 HSPs)
scaffold1941 (33-111)||(120-198)
[»] scaffold0205 (1 HSPs)
scaffold0205 (34-79)||(5609-5653)
[»] scaffold1160 (1 HSPs)
scaffold1160 (154-253)||(478-578)
[»] scaffold0371 (1 HSPs)
scaffold0371 (154-253)||(10604-10704)
[»] scaffold0003 (1 HSPs)
scaffold0003 (36-111)||(96380-96455)
[»] scaffold0802 (1 HSPs)
scaffold0802 (33-71)||(4701-4739)
[»] scaffold0298 (1 HSPs)
scaffold0298 (52-106)||(372-426)
[»] scaffold0285 (1 HSPs)
scaffold0285 (160-253)||(19353-19447)
[»] scaffold0112 (1 HSPs)
scaffold0112 (19-112)||(2870-2963)
[»] scaffold0037 (2 HSPs)
scaffold0037 (18-71)||(112943-112996)
scaffold0037 (18-71)||(117784-117837)
[»] scaffold0104 (2 HSPs)
scaffold0104 (106-154)||(14892-14940)
scaffold0104 (106-154)||(16912-16960)
[»] scaffold0039 (1 HSPs)
scaffold0039 (154-253)||(10086-10186)
[»] scaffold0337 (1 HSPs)
scaffold0337 (36-153)||(3143-3261)
[»] scaffold0113 (1 HSPs)
scaffold0113 (32-71)||(35512-35551)
[»] scaffold0058 (1 HSPs)
scaffold0058 (36-153)||(59651-59769)
[»] scaffold0401 (1 HSPs)
scaffold0401 (164-253)||(8615-8705)
[»] scaffold0334 (1 HSPs)
scaffold0334 (33-71)||(540-578)
[»] scaffold0241 (1 HSPs)
scaffold0241 (33-71)||(3204-3242)
[»] scaffold0018 (1 HSPs)
scaffold0018 (215-253)||(21445-21483)
[»] scaffold0468 (1 HSPs)
scaffold0468 (176-253)||(11270-11347)
[»] scaffold0010 (1 HSPs)
scaffold0010 (18-111)||(126282-126374)
[»] scaffold1256 (1 HSPs)
scaffold1256 (40-104)||(2199-2263)


Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 21399798 - 21399554
Alignment:
Q  12 agagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21399798 agagaagagaacctttcatttgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 21399699  T
Q  112 t---ttgttagttttgatgttatagaaattagggttaaattgcaaaattgatgattttctaaaataagttttggttcaaggtttacatggttttgagtct 208  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21399698 tgttttgttagttttgatgttatagaaattagggttaaattgcaaaattgatgattttctaaaataagttttggttcaaggtttacatggttttgagtct 21399599  T
Q  209 cttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  21399598 cttttgatgtatataaatgtttagacaaacttttgaatcaaattt 21399554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 21794291 - 21794047
Alignment:
Q  12 agagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21794291 agagaagagaacctttcatttgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 21794192  T
Q  112 t---ttgttagttttgatgttatagaaattagggttaaattgcaaaattgatgattttctaaaataagttttggttcaaggtttacatggttttgagtct 208  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21794191 tgttttgttagttttgatgttatagaaattagggttaaattgcaaaattgatgattttctaaaataagttttggttcaaggtttacatggttttgagtct 21794092  T
Q  209 cttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  21794091 cttttgatgtatataaatgtttagacaaacttttgaatcaaattt 21794047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 41 - 253
Target Start/End: Complemental strand, 18834474 - 18834263
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaattag 140  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattctaaaa-ggggtttaacatgttgttttgttagttttgatgttatagaaattag 18834376  T
Q  141 ggttaaattgcaaaattgatgattttctaaaataagttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactt 240  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18834375 ggttaaattgcaaaattgatgattttctaaataatattttggttcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactt 18834276  T
Q  241 ttggatcaaattt 253  Q
    | |||||||||||    
T  18834275 tgggatcaaattt 18834263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 22610262 - 22610386
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaa 135  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22610262 caatctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttattttgttagttttgatgttatagaa 22610361  T
Q  136 attagggttaaattgcaaaattgat 160  Q
    |||| |||||| ||| |||||||||    
T  22610362 attatggttaatttgtaaaattgat 22610386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 23884225 - 23884101
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt---ttgttagttttgatgttatag 133  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  23884225 aatctaaggtaagggcgggactagctttctctaa--atgggttgtatgattctaaaaaggggtttaacatgttgttcttttgttagttttgatgttatag 23884128  T
Q  134 aaattagggttaaattgcaaaattgat 160  Q
    |||||||||||||||| || |||||||    
T  23884127 aaattagggttaaattacacaattgat 23884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 1485232 - 1485134
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1485232 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 1485134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 5852624 - 5852722
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5852624 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 5852722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 14408776 - 14408874
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14408776 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 14408874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 4541702 - 4541801
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactttt-ggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4541702 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaacttttgggatcaaattt 4541801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 14824606 - 14824508
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  14824606 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtcttttttgatgtatataaatgtttagacaaactttgggatcaaattt 14824508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 18816287 - 18816401
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||    
T  18816287 gatcaatataaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtta 18816386  T
Q  131 tagaaattagggtta 145  Q
    |||||||||||||||    
T  18816387 tagaaattagggtta 18816401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 20045527 - 20045625
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20045527 ttgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 20045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 23914814 - 23914716
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23914814 ttgatgattttctaaaataatgttttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 23914716  T

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Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 45289877 - 45289977
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  45289877 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgagatcaaatt 45289976  T
Q  253 t 253  Q
    |    
T  45289977 t 45289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 22345220 - 22345145
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22345220 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaacatgttgtt 22345145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 22356880 - 22356805
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22356880 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaacatgttgtt 22356805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 4484110 - 4484012
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  4484110 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtcttttttgatgtatataaatgtttagacaaactttgagatcaaattt 4484012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 24485370 - 24485470
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  24485370 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 24485469  T
Q  253 t 253  Q
    |    
T  24485470 t 24485470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 4380954 - 4381051
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||| ||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  4380954 ttgacgattttctaaaataatgttttgggtcaagttttatatggttttgagtct-ttttgatgtatataaatgtttagacaaactttgggatcaaattt 4381051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 21514743 - 21514637
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaatt 138  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 21514644  T
Q  139 agggtta 145  Q
    |||||||    
T  21514643 agggtta 21514637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 18816643 - 18816738
Alignment:
Q  159 atgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| |||| ||| ||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18816643 atgattttgtaaactaatgttttgggtcaagttttatatgtttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18816738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 18677394 - 18677492
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||    
T  18677394 ttgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaattt 18677492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 160 - 253
Target Start/End: Original strand, 22258469 - 22258563
Alignment:
Q  160 tgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||| ||||||| ||||| |||| |||||||| || |||||||||||||||||||||||| |||||||||| |||||||||||    
T  22258469 tgattttctaaaataatgttttgggtcaagttttatatggttttcagactcttttgatgtatataaatgttttgacaaactttgggatcaaattt 22258563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 22002587 - 22002487
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  22002587 aattgatgattttctaaaataatgtttttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 22002488  T
Q  253 t 253  Q
    |    
T  22002487 t 22002487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 22208325 - 22208258
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  22208325 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22208258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 36732411 - 36732514
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| | |||||| | ||| ||| ||||||||||||||||||||| |||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttataggaat 36732510  T
Q  138 tagg 141  Q
    ||||    
T  36732511 tagg 36732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 4380616 - 4380723
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||| |||||||| | ||| ||| |||||||||||||||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 4380715  T
Q  138 tagggtta 145  Q
    ||||||||    
T  4380716 tagggtta 4380723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 22483834 - 22483773
Alignment:
Q  45 gtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacat 22483773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 45469180 - 45469249
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  45469180 gaggagaaccagagaagagaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat 45469249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 36306053 - 36305936
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaa 136  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||| || ||||| ||| | | ||||| ||||   |||||||||||    
T  36306053 aatctaaggtaagggtgagactagctttctctaataa-cggttgtatgattctgaaaaaggttttaaaatggt-tgttgtt-gttt---tgttatagaaa 36305960  T
Q  137 ttagggttaaattgcaaaattgat 160  Q
    |||||||||| ||||||| |||||    
T  36305959 ttagggttaatttgcaaagttgat 36305936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 22258306 - 22258369
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||| |||||||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaac 22258369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 6101729 - 6101783
Alignment:
Q  17 agagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  6101729 agagaacctttcaatcgatcaatctaaggtaaaggtgggactaactttctctaat 6101783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 21676590 - 21676701
Alignment:
Q  38 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac-atgttgtt-ttgttagttttgatgttatagaa 135  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| ||| | |||  |||||||||  ||| ||| ||| |||||||||| ||||||||    
T  21676590 atctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaa 21676687  T
Q  136 attagggttaaatt 149  Q
    |||||| |||||||    
T  21676688 attaggtttaaatt 21676701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 12577932 - 12577826
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac--atgttgtt-ttgttagttttgatgttatagaaa 136  Q
    |||||||||||||||||||| ||||||||||||||  ||||||| ||||  |||| |||||||||   | | ||| |||||||||||||||||||||| |    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgttatagaga 12577834  T
Q  137 ttagggtt 144  Q
    ||||||||    
T  12577833 ttagggtt 12577826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 36727016 - 36727068
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  36727016 agaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat 36727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 21678841 - 21678958
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac-atgttgtt-ttgttagttttgatgttatag 133  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||| ||| | |||  |||||||||  ||| ||| ||| |||||||||| ||||||    
T  21678841 caatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatag 21678938  T
Q  134 aaattagggttaaattgcaa 153  Q
     ||||||| || ||||||||    
T  21678939 caattaggtttgaattgcaa 21678958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 22483994 - 22483924
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    |||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  22483994 caatctaaggtaagcg-gggactaactttctctaataatgagttgtataattcttaaaaagggtttaacatg 22483924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 22474650 - 22474550
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  22474650 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatacaaatggttagacaagttttggaatcaaatt 22474551  T
Q  253 t 253  Q
    |    
T  22474550 t 22474550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23899957 - 23900017
Alignment:
Q  11 cagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| ||||| ||||| || ||||||||||||||||||||| ||||| |||||||||||    
T  23899957 cagagaggagaagctttcgatcgatcaatctaaggtaagggtgtgactaactttctctaat 23900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 21676495 - 21676537
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggtt 79  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  21676495 caatctaaggtaagggtgggactagc-ttctctaataatgggtt 21676537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 22532125 - 22532180
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  22532125 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 22536810 - 22536865
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  22536810 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22536865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 18023567 - 18023621
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||    
T  18023567 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacat 18023621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 23883843 - 23883741
Alignment:
Q  152 aaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaa 250  Q
    ||||||||||||||| |||||||| ||||| || |||| |||| ||| ||||||||  ||||| |||| || ||||||||||||||  ||| | ||||||    
T  23883843 aaaattgatgattttgtaaaataatgttttagtccaagttttatatgattttgagtgccttttcatgtttagaaatgtttagacaagttttggaatcaaa 23883744  T
Q  251 ttt 253  Q
    |||    
T  23883743 ttt 23883741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 38184923 - 38184977
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||    
T  38184923 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacat 38184977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 17906826 - 17906919
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||| ||||| || ||| || |||||||||||||||||||| |||||||||||  |  ||||||||||||| |||  || ||||||| |||||    
T  17906826 gagaagctttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgt 17906919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 17978574 - 17978674
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||||||||||||||||  |||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  17978574 aattggtgattttctaaaataatattttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 17978673  T
Q  253 t 253  Q
    |    
T  17978674 t 17978674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 22208162 - 22208062
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  22208162 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 22208063  T
Q  253 t 253  Q
    |    
T  22208062 t 22208062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 38989347 - 38989247
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||| ||||||||||||  |||||| ||||| |||| ||||||||||||  ||  | ||||||| ||||| ||||||||  ||||| ||||||||    
T  38989347 aattgatgaatttctaaaataatattttgggtcaagttttatatggttttgagtgcctaatcatgtatagaaatggttagacaagtttttgaatcaaatt 38989248  T
Q  253 t 253  Q
    |    
T  38989247 t 38989247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 39020444 - 39020344
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||| ||||||||||||  |||||| ||||| |||| ||||||||||||  ||  | ||||||| ||||| ||||||||  ||||| ||||||||    
T  39020444 aattgatgaatttctaaaataatattttgggtcaagttttatatggttttgagtgcctaatcatgtatagaaatggttagacaagtttttgaatcaaatt 39020345  T
Q  253 t 253  Q
    |    
T  39020344 t 39020344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 6101949 - 6102012
Alignment:
Q  190 tttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||| |||||||||||| ||||   ||||||||||||| ||||||||  |||||||||||||||    
T  6101949 tttatatggttttgagtgtcttaacatgtatataaatggttagacaagtttttggatcaaattt 6102012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 36732549 - 36732604
Alignment:
Q  106 tgttgttttgttagttttgat-gttatagaaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||||    
T  36732549 tgttgttttgttaatttagattgttattgaaattagggttaatttgcaaaattgat 36732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 20022036 - 20022070
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||| |||||||||||    
T  20022036 aatctaaggtaagggtgggactaactttctctaat 20022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 31722485 - 31722523
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  31722485 gatcaatctaagataagggtgggactaactttctctaat 31722523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 20397505 - 20397581
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||||||||||||||| || |||||||||||  |  ||||||| ||||| |||  | ||||| |||||||||    
T  20397505 caatctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtt 20397581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 37 - 253
Target Start/End: Original strand, 58409 - 58626
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  58409 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttaaagaaa 58508  T
Q  137 ttagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagaca 235  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |    
T  58509 ttagggttaaattgcaaaattgatgattttctaaaataatgtttttgttcaagttttatatggttttgagtctcttttgatgtatataaatgtttagata 58608  T
Q  236 aacttttggatcaaattt 253  Q
    |||||| |||||||||||    
T  58609 aactttgggatcaaattt 58626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 34 - 253
Target Start/End: Complemental strand, 15720838 - 15720615
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgtta 130  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  15720838 atcaatttaaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgtta 15720739  T
Q  131 tagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  15720738 tagaaattatggttaaattgcaaaattgatgattttctaaaataatgttttggttcaagttttatatggttttgagcctcttttgatatatataaatgtt 15720639  T
Q  230 tagacaaacttttggatcaaattt 253  Q
    |||||||||||| |||||||||||    
T  15720638 tagacaaactttgggatcaaattt 15720615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 13744506 - 13744629
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  13744506 aatctaaggtaagggtgggactagctttctctaataatgggttttatgattctaaaaaggggtttaacatgttgttttgttatttttaatgttatagaaa 13744605  T
Q  137 ttagggttaaattgcaaaattgat 160  Q
    |||||||||| ||||||| |||||    
T  13744606 ttagggttaatttgcaaagttgat 13744629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 36300634 - 36300757
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatag 133  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36300634 atcaatctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttattttgttagttttgatgatatag 36300733  T
Q  134 aaattagggttaaattgcaaaatt 157  Q
     |||||||||||||||||||||||    
T  36300734 gaattagggttaaattgcaaaatt 36300757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 8930761 - 8930887
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttatag 133  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  8930761 aatctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatag 8930860  T
Q  134 aaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||| |||||||||||||    
T  8930861 aaattagggttaatttgcaaaattgat 8930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 33556100 - 33556225
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttata 132  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||    
T  33556100 caatctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttag-tttgatgttata 33556198  T
Q  133 gaaattagggttaaattgcaaaattgat 160  Q
    |||||||||||| ||||| |||||||||    
T  33556199 gaaattagggtt-aattgaaaaattgat 33556225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 15700731 - 15700852
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt-ttgttagttttgatgttatagaa 135  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  15700731 aatctaaggtaaggatgatactagctttctctaataatgggttgtatggttctaaaaaggggtttaacatgtagttgttgttagttttaatgttatagaa 15700830  T
Q  136 attagggttaaattgcaaaattg 158  Q
    ||||||||| |||||||||||||    
T  15700831 attagggtt-aattgcaaaattg 15700852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 18570704 - 18570577
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttata 132  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||   |||||||||||||||||||||||||||    
T  18570704 caatctaaggtaagggtgagactagctttctctaataatgggttgtaagattctagaaaggggtttaacatattgttgttttgttagttttgatgttata 18570605  T
Q  133 gaaattagggttaaattgcaaaattgat 160  Q
    ||| ||| |||||| ||| | |||||||    
T  18570604 gaagttatggttaatttgtagaattgat 18570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 25943319 - 25943199
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat---gttgttttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||   ||||||||| |||||||||||||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaacatttcgttgttttg-tagttttgatgttatagaaat 25943221  T
Q  138 tagggttaaattgcaaaattgat 160  Q
    ||||||| |||||||||||||||    
T  25943220 tagggtt-aattgcaaaattgat 25943199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 15376045 - 15376143
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15376045 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 15376143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 20384455 - 20384553
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20384455 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 20384553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 13315078 - 13315167
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgat 126  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  13315078 aatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaacatgttgttttgttaattttgat 13315167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 457153 - 457054
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactttt-ggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  457153 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaacttttgggatcaaattt 457054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 4691056 - 4691154
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  4691056 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtataaaaatgtttagacaaactttgggatcaaattt 4691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 13870176 - 13870078
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13870176 ttgatgattttctaaaataatgttttgggtcaaattttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 13870078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 15575641 - 15575755
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | |||  || ||||||||||||||||||    
T  15575641 gatcaatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgtta 15575740  T
Q  131 tagaaattagggtta 145  Q
    |||||||||||||||    
T  15575741 tagaaattagggtta 15575755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 16410890 - 16410792
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16410890 ttgatgattttctaaaataatgttttgggtcaagtttaatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 16410792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 16580551 - 16580453
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16580551 ttgatgattttctaaaataatgttttgggtcaagttttctatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 16580453  T

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Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 27217692 - 27217594
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  27217692 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtcttttttgatgtatataaatgtttagacaaactttgggatcaaattt 27217594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 47095511 - 47095394
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttat 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||  ||||||| | ||| ||| ||||||| |||||||||||    
T  47095511 atcaatctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgttat 47095412  T
Q  132 agaaattagggttaaatt 149  Q
    ||||||||||||||||||    
T  47095411 agaaattagggttaaatt 47095394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 32126323 - 32126223
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  32126323 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatttatataaatgtttagacaaactttgggatcaaatt 32126224  T
Q  253 t 253  Q
    |    
T  32126223 t 32126223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 160 - 253
Target Start/End: Original strand, 14161020 - 14161114
Alignment:
Q  160 tgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||| ||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14161020 tgattttctaaaataatgttttgggtcaagttttatatggttttgagactcttttgatgtatataaatgtttagacaaactttgggatcaaattt 14161114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 18431543 - 18431445
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  18431543 ttgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggattaaattt 18431445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 18628396 - 18628298
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18628396 ttgatgattttctaaaataatattttgggtcaagttttgtatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18628298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 18641102 - 18641004
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18641102 ttgatgattttctaaaataatattttgggtcaagttttgtatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 20484910 - 20484812
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||| |||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20484910 ttgatgattttttaaaataatgttttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 20484812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 18874657 - 18874770
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct--aaaaaggggtttaacatgttgt-tttgttagttttgatgtt 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||||||   ||||  ||| |||||||||||||    
T  18874657 gatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaaaggggtttaac--cttgtagttggtagttttgatgtt 18874754  T
Q  130 atagaaattagggtta 145  Q
    ||||||||||||||||    
T  18874755 atagaaattagggtta 18874770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 708421 - 708531
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttt-tgttagttttgatgtta 130  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| | || |||  |||||||||||||||||    
T  708421 gatcaatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgtta 708520  T
Q  131 tagaaattagg 141  Q
    ||| |||||||    
T  708521 taggaattagg 708531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 16233352 - 16233254
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  16233352 ttgatgattttctaaaataatgttttgggtcaagttttatgtggttttgagtctcttttgatgtatataaatatttagacaaactttggcatcaaattt 16233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 16460153 - 16460251
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  16460153 ttgatgattttcaaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgttgagacaaactttaagatcaaattt 16460251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 20252174 - 20252284
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca-tgttgtt-ttgttagttttgatgtta 130  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| |||||||||| ||| ||| || |||||||| ||||||    
T  20252174 gatcaatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgtta 20252273  T
Q  131 tagaaattagg 141  Q
    |||||||||||    
T  20252274 tagaaattagg 20252284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 45846986 - 45847084
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||| | |||||||||||||||||||||||||  ||||||||||    
T  45846986 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttaacgtatataaatgtttagacaaactttgagatcaaattt 45847084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 48212726 - 48212835
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaa--ggggtttaacat-gttgtt-ttgttagttttgatgttatagaa 135  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||||| ||  || |||||||||||||||||||||||    
T  48212726 ctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattgttgttagttttgatgttatagaa 48212825  T
Q  136 attagggtta 145  Q
    ||||||||||    
T  48212826 attagggtta 48212835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 19195667 - 19195562
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt-ttgttagttttgatgttatagaa 135  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| || | | ||| ||| ||||||||||||||||||||| |    
T  19195667 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaagggtttaaccttgtagttgttgttagttttgatgttatagga 19195568  T
Q  136 attagg 141  Q
    ||||||    
T  19195567 attagg 19195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 41523752 - 41523652
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  41523752 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 41523653  T
Q  253 t 253  Q
    |    
T  41523652 t 41523652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 41526214 - 41526114
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  41526214 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 41526115  T
Q  253 t 253  Q
    |    
T  41526114 t 41526114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 15575997 - 15576092
Alignment:
Q  159 atgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| ||||||||  |||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15575997 atgattttataaaataatattttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 15576092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 43745709 - 43745602
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||||| | ||| ||| |||||||||||||||||||||||||    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 43745610  T
Q  138 tagggtta 145  Q
    ||| ||||    
T  43745609 tagagtta 43745602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 20488271 - 20488173
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||| | |||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  20488271 ttgatgattttctaaaataatattttgggtcatgttttatatgattttgagtctcttttgatgtatataaatgtttagataaactttgggatcaaattt 20488173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 26355311 - 26355393
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaa 237  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  26355311 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaa 26355393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 26357763 - 26357845
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaa 237  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  26357763 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaa 26357845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 14948449 - 14948549
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  14948449 aattgatgattttctaaaataatgtttttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 14948548  T
Q  253 t 253  Q
    |    
T  14948549 t 14948549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 43745300 - 43745221
Alignment:
Q  159 atgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaa 237  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  43745300 atgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttaatgtatataaatgtttagacaaa 43745221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 38299804 - 38299738
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  38299804 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 18875009 - 18875105
Alignment:
Q  156 ttgatgattttctaaaataagttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| | |||  ||||  |||| |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  18875009 ttgatgattttctaaaataa-tgttgagtcaatttttatatggttttgagtctcttttgatgtatctaaatgtttagacaaactttgggattaaattt 18875105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 48807286 - 48807355
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  48807286 gaggagaaccagagaagagaacctttcaatcgatcaatctaaggtaagggtgggactaactttctctaat 48807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8488093 - 8488157
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8513752 - 8513816
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8513816  T

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Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 24703064 - 24702964
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| | ||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  24703064 aattgatgattttctaaaataatgattttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 24702965  T
Q  253 t 253  Q
    |    
T  24702964 t 24702964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 24705511 - 24705411
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| | ||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  24705511 aattgatgattttctaaaataatgattttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 24705412  T
Q  253 t 253  Q
    |    
T  24705411 t 24705411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 11392632 - 11392716
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttt 241  Q
    |||||||||||||||||||| |||||||   ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  11392632 ttgatgattttctaaaataatgttttggg--aagttttatgtggttttgagtctcttttgatgtatataaatgtttagacaaacttt 11392716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 14218856 - 14218925
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  14218856 gaggagaatcagagaagagaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat 14218925  T

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Target: chr7; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 15700887 - 15700948
Alignment:
Q  45 gtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaacat 15700948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 8513913 - 8514013
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||||||||||||||||  |||| | ||||| |||| |||||||| |  |||||||||||||||||||||| |||||||||||| ||||||||||    
T  8513913 aattggtgattttctaaaataatattttaggtcaagttttatatggttttcatactcttttgatgtatataaatgtgtagacaaactttgggatcaaatt 8514012  T
Q  253 t 253  Q
    |    
T  8514013 t 8514013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 3287804 - 3287743
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaa 94  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||    
T  3287804 gatcaatctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 16250219 - 16250287
Alignment:
Q  38 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||| | |||| |||||||||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaacat 16250287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 16078421 - 16078352
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||||||||||||||||| | ||||  ||||||||||||||||||| |||||||||||    
T  16078421 gaggagaaccagagaagagaacctttcaatcggtcaagataaggtaagggtgggactaactttctctaat 16078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 43276744 - 43276797
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaa 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaa 43276797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 14317966 - 14317866
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| |||||||||||| |||| | ||||||||||||| ||||||||  ||| | ||||||||    
T  14317966 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgtcttatcatgtatataaatggttagacaagttttggaatcaaatt 14317867  T
Q  253 t 253  Q
    |    
T  14317866 t 14317866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 4690662 - 4690769
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    ||||||||| |||||||||| |||||||||||  |  ||||||| ||||| |||| |||||||| | ||| ||| || ||| ||||||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattacttttgatgttatagaaat 4690761  T
Q  138 tagggtta 145  Q
    ||||||||    
T  4690762 tagggtta 4690769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 3192393 - 3192470
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||| ||| |||| |||| ||||||| |||||| |||| || |||||||||||||||| || |||||||||||    
T  3192393 gttttggtttaagttttatatggatttgagtgtcttttcatgtttagaaatgtttagacaaaccttgggatcaaattt 3192470  T

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Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 8931145 - 8931230
Alignment:
Q  152 aaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaa 236  Q
    ||||||||||||||| |||||||| |||||||  |||  |||| ||||||||||||  ||||| |||| |||||||||||||||||    
T  8931145 aaaattgatgattttgtaaaataatgttttgggccaaattttatatggttttgagtgccttttcatgtttataaatgtttagacaa 8931230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 19283108 - 19283040
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattct--aaaaaggggtttaacatg 107  Q
    ||||||||||||| ||||| |||||||||| |||||||||||| |||||  |||| |||||||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaagggggtttaacatg 19283040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 9743237 - 9743337
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  9743237 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 9743336  T
Q  253 t 253  Q
    |    
T  9743337 t 9743337  T

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Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 12127159 - 12127233
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  12127159 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 12127233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 20586412 - 20586374
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  20586412 gatcaatctaaggtaagggtgggactaactttctctaat 20586374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 33556445 - 33556547
Alignment:
Q  152 aaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaa 250  Q
    |||||||||||||||||||||||| ||||||  ||| | |||  ||||||||||||  ||||| |||| |  ||||||||||||||| ||| | ||||||    
T  33556445 aaaattgatgattttctaaaataatgttttgagtcatgttttgtatggttttgagtgccttttcatgtttggaaatgtttagacaaattttggaatcaaa 33556544  T
Q  251 ttt 253  Q
    |||    
T  33556545 ttt 33556547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 48213107 - 48213205
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||| | ||||  |||| |||||||||||| |||| | ||||||| ||||| ||||||||  ||| | |||||||||    
T  48213107 ttgatgattttctaaaataatgttttaggtcaaattttatatggttttgagtgtcttatcatgtatagaaatggttagacaagttttggaatcaaattt 48213205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 13315446 - 13315541
Alignment:
Q  159 atgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||| ||||||| ||| | |||  ||||||||||||  ||||| |||| || ||||||||||||||  ||| | |||||||||    
T  13315446 atgattttctaaaataatgttttgggtcatgttttgtatggttttgagtgccttttcatgtttagaaatgtttagacaagttttggaatcaaattt 13315541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 831861 - 831915
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    ||||||||| |||||||||  ||||||||||  |||||||||| |||||||||||    
T  831861 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacat 831915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 1197041 - 1197095
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    ||||||||| |||||||||  ||||||||||  |||||||||| |||||||||||    
T  1197041 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacat 1197095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 16186960 - 16186930
Alignment:
Q  36 caatctaaggtaagggtgggactagctttct 66  Q
    |||||||||||||||||||||||||||||||    
T  16186960 caatctaaggtaagggtgggactagctttct 16186930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 20214203 - 20214129
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||||||| ||||||| |||  || ||||||| ||||| |||  | ||||| ||||||||    
T  20214203 aatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgt 20214129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 34958109 - 34958015
Alignment:
Q  160 tgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||| |||| ||| ||||||| ||| | |||| |||||||||||| ||||   ||||||| ||||| ||||||||  |||||||||||||||    
T  34958109 tgattttgtaaattaatgttttgggtcatgttttatatggttttgagtgtcttaacatgtatagaaatggttagacaagtttttggatcaaattt 34958015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 4071895 - 4071842
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||| ||||| || ||| || |||||||||||||||||||| |||||||||||    
T  4071895 gagaagctttcgatcgattaacctaaggtaagggtgggactaactttctctaat 4071842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 35771418 - 35771471
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||| ||||| || ||| || |||||||||||||||||||| |||||||||||    
T  35771418 gagaagctttctatcgattaacctaaggtaagggtgggactaactttctctaat 35771471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 16186887 - 16186859
Alignment:
Q  117 tagttttgatgttatagaaattagggtta 145  Q
    |||||||||||||||||||||||||||||    
T  16186887 tagttttgatgttatagaaattagggtta 16186859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 24269942 - 24270018
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||||||||||||||| || |||||||||||  |  ||||||| ||||| |||  | ||||| |||||||||    
T  24269942 caatctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtt 24270018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 14442249 - 14442013
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttg 115  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||   |||||||    
T  14442249 agaacctttcgatcaatcaatctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaacatgttgttgttttg 14442150  T
Q  116 ttagttttgatgttatagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  14442149 ttagttttgatgttatagaaattagggttaaattgcaaaattgttgattttctaaaataatgttttggttcaagttttacatggttttgagtctcttttg 14442050  T
Q  215 atgtatataaatgtttagacaaacttttggatcaaat 251  Q
    ||||||||||||||||||||||||||| |||||||||    
T  14442049 atgtatataaatgtttagacaaactttgggatcaaat 14442013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 17684835 - 17685048
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat---gttgttttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaacatcttgttgttttgttagttttgatgttatagaaat 17684934  T
Q  138 tagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaa 236  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  17684935 tagggttaaattgcaaaattgatgattttctaaaataatgttttggttcaaattttacatggttttgagtctcttttgatgtatataaatgtttagacaa 17685034  T
Q  237 acttttggatcaaa 250  Q
    ||||| ||||||||    
T  17685035 actttgggatcaaa 17685048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 41 - 253
Target Start/End: Original strand, 54875474 - 54875691
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatagaaat 54875573  T
Q  138 tagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatgg-ttttgagtctcttttgatgtatataaatgtttagaca 235  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||    
T  54875574 tagggttaaattgcaaaattgatgattttctaaaataatgttttggttcaagttttacatggtttttaagtctcttttgatgtatataaatgtttataca 54875673  T
Q  236 aacttttggatcaaattt 253  Q
    ||||||  ||||||||||    
T  54875674 aactttgagatcaaattt 54875691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 37 - 253
Target Start/End: Complemental strand, 6159461 - 6159241
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatag 133  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  6159461 aatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatag 6159362  T
Q  134 aaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttag 232  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  6159361 aaattagggttaaattgcagaattgatgattttccaaaataatgttttggttcaagttttatatggttttgagtctcttttgatgtataaaaatgtttag 6159262  T
Q  233 acaaacttttggatcaaattt 253  Q
    ||||||||| |||||||||||    
T  6159261 acaaactttgggatcaaattt 6159241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 17669698 - 17669911
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgtt---gttttgttagttttgatgttatagaaat 137  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatagaaat 17669797  T
Q  138 tagggttaaattgcaaaattgatgattttctaaaat-aagttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaa 236  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  17669798 tagggttaaattgcaaaaatgatgattttctaaaataaagttttggttccagttttacatggtttagagtctcttttgatgtatataaatgtttagacaa 17669897  T
Q  237 acttttggatcaaa 250  Q
    ||||| ||||||||    
T  17669898 actttgggatcaaa 17669911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 33 - 253
Target Start/End: Original strand, 2841498 - 2841722
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgtt 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  2841498 gatcaatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaacatgttgttgttttgttagttttgatgtt 2841597  T
Q  130 atagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgt 228  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||| || | |||||||||||||| |||||||| ||||||||||    
T  2841598 atagaaattagagttaaattgcagaattgatgattttctaaaataatgttttggatcaagtttaatatggttttgagtctattttgatgcatataaatgt 2841697  T
Q  229 ttagacaaacttttggatcaaattt 253  Q
    || |||||||||| |||||||||||    
T  2841698 tttgacaaactttgggatcaaattt 2841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 33 - 253
Target Start/End: Complemental strand, 6156770 - 6156547
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt---ttgttagttttgatgtt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||    
T  6156770 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa-ggggtttaacatgttgttgttttgttagttttgatgtt 6156672  T
Q  130 atagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgt 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| || |||| |||| ||||||||||||  ||||| |||| || ||||||    
T  6156671 atagaaattagggttaaattgcagaattgatgattttctaaaataatgttttagtccaagttttatatggttttgagtgccttttcatgtttagaaatgt 6156572  T
Q  229 ttagacaaacttttggatcaaattt 253  Q
    ||||||||  |||  ||||||||||    
T  6156571 ttagacaagttttgagatcaaattt 6156547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 3527154 - 3527262
Alignment:
Q  38 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3527154 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaat 3527253  T
Q  138 tagggttaa 146  Q
    |||||||||    
T  3527254 tagggttaa 3527262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 17208606 - 17208470
Alignment:
Q  11 cagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgtt 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| || ||||| | |||     
T  17208606 cagagaagagaacctttcaatcgatcaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgta 17208507  T
Q  110 gtt-ttgttagttttgatgttatagaaattagggtta 145  Q
    ||| |||||||||||||||||||||||||||||||||    
T  17208506 gttgttgttagttttgatgttatagaaattagggtta 17208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 24548953 - 24549057
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaatta 139  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  24548953 ctaaagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaatatgttgttttgttag-tttgatgttatagaaatta 24549051  T
Q  140 gggtta 145  Q
    ||||||    
T  24549052 gggtta 24549057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 6468466 - 6468564
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6468466 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 6468564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 14520506 - 14520388
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||| | ||| ||| ||||||||||||||||||    
T  14520506 gatcaatctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgtta 14520407  T
Q  131 tagaaattagggttaaatt 149  Q
    || ||||||||||||||||    
T  14520406 taaaaattagggttaaatt 14520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 17464008 - 17463910
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17464008 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 17463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 34160156 - 34160058
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34160156 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 34160058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 45577773 - 45577871
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45577773 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 45577871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 22841274 - 22841405
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca-------tgttgttttgttagttttgatgt 128  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||       |||||||||||||||||||| ||    
T  22841274 caatctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatgattgttgttgttttgttagttttgaggt 22841373  T
Q  129 tatagaaattagggttaaattgcaaaattgat 160  Q
    |||||||||||||||||| ||| | |||||||    
T  22841374 tatagaaattagggttaatttgtagaattgat 22841405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 50755266 - 50755365
Alignment:
Q  53 gggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt---tttgttagttttgatgttatagaaattagggttaaatt 149  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||    
T  50755266 gggactaactttctctaataatggattgtatgattctaaaaaggggtttaacatgttgttgctttgttagttttgatgttatagaaattagggtttaatt 50755365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 13151118 - 13151218
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13151118 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 13151217  T
Q  253 t 253  Q
    |    
T  13151218 t 13151218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 13153586 - 13153686
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13153586 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 13153685  T
Q  253 t 253  Q
    |    
T  13153686 t 13153686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 10541619 - 10541717
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  10541619 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagaaaaactttgggatcaaattt 10541717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 15413261 - 15413163
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15413261 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctattttgatgtatataaatgtttagacaaactttgggatcaaattt 15413163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 17208231 - 17208133
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17208231 ttgatgattttctaaaataatgttttcggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 17208133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 24547253 - 24547146
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatagaaa 136  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||    
T  24547253 ctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaacatgttgttgttttgttag-tttgatgttatagaaa 24547155  T
Q  137 ttagggtta 145  Q
    |||||||||    
T  24547154 ttagggtta 24547146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 55477322 - 55477224
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  55477322 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttggcatcaaattt 55477224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 14520153 - 14520055
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  14520153 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtgtataaatgtttagtcaaactttgggatcaaattt 14520055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 45606237 - 45606335
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  45606237 ttgatgattttctaaaataatgttttgggtcaagttttatgtggttttgagtctcttttgatgtatataaatgtttagacaaactttggcatcaaattt 45606335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 14671716 - 14671617
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctctttt-gatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  14671716 ttgatgattttctaaaataatgttttgggtcaagttttatatgattttgagtctctttttgatgtatataaatgtttagacaaactttgggatcaaattt 14671617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 10247054 - 10247152
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10247054 ttgatgattttctaaaataatattttgggtcaaattttatatggtttcgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 10247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 14508740 - 14508640
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||    
T  14508740 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttcagactcttttgatgtatataaatgttttgacaaactttgggatcaaatt 14508641  T
Q  253 t 253  Q
    |    
T  14508640 t 14508640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 12917301 - 12917372
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  12917301 caatctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaacatg 12917372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 15978365 - 15978267
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||| ||| ||| | |||||||||    
T  15978365 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagagaaattttggaatcaaattt 15978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 5215540 - 5215440
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||||||||||||||||  |||||| ||||| |||| |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||    
T  5215540 aattggtgattttctaaaataatattttgggtcaagttttatatggtttttagactcttttgatgtatataaatgttttgacaaactttgggatcaaatt 5215441  T
Q  253 t 253  Q
    |    
T  5215440 t 5215440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 7780675 - 7780775
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  7780675 aattgatgattttctaaaataatgtttttgatcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 7780774  T
Q  253 t 253  Q
    |    
T  7780775 t 7780775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 14152558 - 14152658
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||| |||||||||| ||||||||||    
T  14152558 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttcagaatcttttgatgtatataaatgttttgacaaactttgggatcaaatt 14152657  T
Q  253 t 253  Q
    |    
T  14152658 t 14152658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 16453605 - 16453704
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  16453605 aattgatgattttctaaaataatgttttgg-tcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 16453703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 28847949 - 28848049
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||| ||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  28847949 aattcatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 28848048  T
Q  253 t 253  Q
    |    
T  28848049 t 28848049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 54330465 - 54330565
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||||||||||||||||  |||||| ||||  |||| || ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  54330465 aattggtgattttctaaaataatattttgggtcaaattttatatagttttgaatctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 54330564  T
Q  253 t 253  Q
    |    
T  54330565 t 54330565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 14641544 - 14641611
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  14641544 aatctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaac 14641611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 29907695 - 29907584
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatg-ttatag 133  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| |||||||| | ||| ||| ||||||| ||||||| ||| ||    
T  29907695 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagag 29907596  T
Q  134 aaattagggtta 145  Q
    ||||||||||||    
T  29907595 aaattagggtta 29907584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 29948861 - 29948750
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatg-ttatag 133  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| |||||||| | ||| ||| ||||||| ||||||| ||| ||    
T  29948861 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagag 29948762  T
Q  134 aaattagggtta 145  Q
    ||||||||||||    
T  29948761 aaattagggtta 29948750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 29998015 - 29997904
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatg-ttatag 133  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| |||||||| | ||| ||| ||||||| ||||||| ||| ||    
T  29998015 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagag 29997916  T
Q  134 aaattagggtta 145  Q
    ||||||||||||    
T  29997915 aaattagggtta 29997904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 45803326 - 45803396
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  45803326 caatctaaagttagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacat 45803396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 14152398 - 14152462
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaac 14152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 5215707 - 5215636
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| | |||| |||||||||    
T  5215707 gatcaatataaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaac 5215636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 3527533 - 3527635
Alignment:
Q  152 aaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaa 250  Q
    ||||||||||||||| |||||||| |||||||| |||| |||| ||||||||||||  ||||| |||| || ||||||||||||||  ||| | ||||||    
T  3527533 aaaattgatgattttgtaaaataatgttttggtccaagttttatatggttttgagtgcctttttatgtttagaaatgtttagacaagttttggaatcaaa 3527632  T
Q  251 ttt 253  Q
    |||    
T  3527633 ttt 3527635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 3160622 - 3160740
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttatag 133  Q
    |||||||||||||||||| ||||| | |||| |||| ||| ||  ||| |||||||||| ||||||||| | || ||| ||| |||||||||| ||||||    
T  3160622 caatctaaggtaagggtgagactaaccttctttaatcatgagta-tataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatag 3160720  T
Q  134 aaattagggttaaattgcaa 153  Q
    |||||||| |||||||||||    
T  3160721 aaattaggtttaaattgcaa 3160740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 13522326 - 13522386
Alignment:
Q  89 taaaaaggggtttaacatgttg---ttttgttagttttgatgttatagaaattagggttaa 146  Q
    |||||||| |||||||||||||   |||||||| |||||||||||||||||||||||||||    
T  13522326 taaaaaggagtttaacatgttgatgttttgttaattttgatgttatagaaattagggttaa 13522386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 16051002 - 16050909
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||| ||||| || ||| || |||||||||||||||||||| |||||||||||  |  ||||||||||||| |||  |||||||||| |||||    
T  16051002 gagaagctttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgt 16050909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 19568200 - 19568256
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    ||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  19568200 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19568256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 50350812 - 50350929
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct--aaaaaggggtttaac--atgttg-ttttgttagttttgatgttat 131  Q
    ||||||||||||||||||||||| | |||| |||| ||| | | ||| |||||  |||||||||||||||   ||| | |||||||||||||||||||||    
T  50350812 aatctaaggtaagggtgggactaaccttctttaatcatgag-tatataattctgaaaaaaggggtttaacctttgtagtttttgttagttttgatgttat 50350910  T
Q  132 agaaattagggttaaattg 150  Q
    ||| |||||||||| ||||    
T  50350911 agagattagggttagattg 50350929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 2247877 - 2247931
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||    
T  2247877 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacat 2247931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 13185955 - 13185917
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  13185955 gatcaatctaaggtaagggtgggactaactttctctaat 13185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 40808056 - 40808018
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  40808056 gatcaatctaaggtaagggtgggactaactttctctaat 40808018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 40812893 - 40812855
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  40812893 gatcaatctaaggtaagggtgggactaactttctctaat 40812855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 44274478 - 44274440
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  44274478 gatcaatctaaggtaagggtgggactaactttctctaat 44274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 45471809 - 45471771
Alignment:
Q  195 atggttttgagtctcttttgatgtatataaatgtttaga 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  45471809 atggttttgagtctcatttgatgtatataaatgtttaga 45471771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 53646217 - 53646317
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  53646217 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 53646316  T
Q  253 t 253  Q
    |    
T  53646317 t 53646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 15566800 - 15566733
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||| ||||||||||||||| |||||||||||  |  ||||||| ||||| |||| |||||||||    
T  15566800 aatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 15566733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 22306779 - 22306842
Alignment:
Q  190 tttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||| |||||||||||| ||||   ||||||| ||||| ||||||||| |||||||||||||||    
T  22306779 tttatatggttttgagtgtcttaacatgtatagaaatggttagacaaatttttggatcaaattt 22306842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 25104291 - 25104354
Alignment:
Q  190 tttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||| |||| ||||||| |||||| |||| || ||| ||||||||||||||| |||||||||||    
T  25104291 tttatatggatttgagtgtcttttcatgtttagaaacgtttagacaaactttgggatcaaattt 25104354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 45471766 - 45471727
Alignment:
Q  214 gatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  45471766 gatgtatataaatgtttagacaaactttgagatcaaattt 45471727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 48043862 - 48043957
Alignment:
Q  159 atgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| |||| ||| |||||||| |||  |||| ||||||||||||  ||||| |||| |||||||||| ||||||  ||| |||||||||||    
T  48043862 atgattttgtaaattaatgttttggtccaaattttatatggttttgagtgccttttcatgtttataaatgttcagacaagttttgggatcaaattt 48043957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 5200235 - 5200273
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  5200235 gatccatctaaggtaagggtgggactaactttctctaat 5200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 10563768 - 10563730
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  10563768 gatcaatctaaggtaatggtgggactaactttctctaat 10563730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 25201803 - 25201709
Alignment:
Q  160 tgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||| |||| ||| |||||||| |||  |||| ||||||||||||  ||||| |||| || ||||||||||||||  ||| |||||||||||    
T  25201803 tgattttgtaaattaatgttttggtccaaattttatatggttttgagtgccttttcatgtttagaaatgtttagacaagttttgggatcaaattt 25201709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 25202190 - 25202149
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggtt 79  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  25202190 aatctaaggtaagggtgggactagc-ttcgctaataatgggtt 25202149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 33565147 - 33565109
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  33565147 gatcaatctaaggtaagggtgtgactaactttctctaat 33565109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 35960920 - 35960958
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||||||||||||||||||||| || |||||||||||    
T  35960920 gatcaatctaaggtaagggtgggattaactttctctaat 35960958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 12917715 - 12917792
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| |||| |||| |||||||||||| |||||| |||| || |||| |||||||||  ||| | |||||||||    
T  12917715 gttttggtccaagttttatatggttttgagtgtcttttcatgtttagaaatatttagacaagttttggaatcaaattt 12917792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 12155102 - 12155138
Alignment:
Q  117 tagttttgatgttatagaaattagggttaaattgcaa 153  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  12155102 tagttttgatgttatagaagttagggttaatttgcaa 12155138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 33 - 253
Target Start/End: Complemental strand, 40167 - 39943
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgtt 129  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  40167 gatcaatctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgtt 40068  T
Q  130 atagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgt 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||| |    
T  40067 atagaaattagggttaaattgcagaattgatgattttctaaaataatgttttggttcaagttttatatggttttgagtctcttttgatatatataaatat 39968  T
Q  229 ttagacaaacttttggatcaaattt 253  Q
    ||||||||||||| |||||||||||    
T  39967 ttagacaaactttgggatcaaattt 39943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 4e-87; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 36 - 253
Target Start/End: Complemental strand, 20588695 - 20588472
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaag--gggtttaacatgtt---gttttgttagttttgatgtta 130  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||   |||||||||||||||||||||    
T  20588695 caatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatgtttttgttttgttagttttgatgtta 20588596  T
Q  131 tagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  20588595 tagaaattagggttaaattgcaaaattgatgattttctaaaataatgttttggttcaagttttatatggttttgagtctctttttatgtatataaatgtt 20588496  T
Q  230 tagacaaacttttggatcaaattt 253  Q
    |||||||||||| |||||||||||    
T  20588495 tagacaaactttgggatcaaattt 20588472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 36 - 253
Target Start/End: Complemental strand, 20593233 - 20593010
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaag--gggtttaacatgtt---gttttgttagttttgatgtta 130  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||   |||||||||||||||||||||    
T  20593233 caatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatgtttttgttttgttagttttgatgtta 20593134  T
Q  131 tagaaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||||||||||    
T  20593133 tagaaattagggttaaattgcaaaattgatgattttctaaaataatgttttggttcaagttttatatggttttgagtctctttttatttatataaatgtt 20593034  T
Q  230 tagacaaacttttggatcaaattt 253  Q
    |||||||||||| |||||||||||    
T  20593033 tagacaaactttgggatcaaattt 20593010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 34392825 - 34392698
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttata 132  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  34392825 caatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttata 34392726  T
Q  133 gaaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||||||||||||||||||    
T  34392725 gaaattagggttaaattgcaaaattgat 34392698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 45499598 - 45499472
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatag 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||| | |||||||    
T  45499598 aatctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaacatgttgttgttttgttagttttaacgttatag 45499499  T
Q  134 aaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||||||||||| |||||    
T  45499498 aaattagggttaaattgcaaagttgat 45499472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 8306662 - 8306552
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgtt---gttttgttagttttgatgttatag 133  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  8306662 aatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgttttgttagttttgatgttatag 8306563  T
Q  134 aaattagggtt 144  Q
    |||||||||||    
T  8306562 aaattagggtt 8306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 13989696 - 13989598
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13989696 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 13989598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 21474416 - 21474515
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactttt-ggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21474416 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaacttttgggatcaaattt 21474515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 14237773 - 14237871
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  14237773 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgcatataaatgtttagacaaactttgggatcaaattt 14237871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 51083110 - 51083009
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactttt-ggatcaaat 251  Q
    ||||||||||||||||||||||  |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51083110 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaacttttgggatcaaat 51083011  T
Q  252 tt 253  Q
    ||    
T  51083010 tt 51083009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 23593060 - 23593161
Alignment:
Q  154 aattgatgattttctaaaataag--ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaat 251  Q
    ||||||||||||| ||||||||   |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23593060 aattgatgattttttaaaataatgtttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaat 23593159  T
Q  252 tt 253  Q
    ||    
T  23593160 tt 23593161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 28476730 - 28476840
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||||||    
T  28476730 aatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 28476829  T
Q  135 aattagggtta 145  Q
    |||||||||||    
T  28476830 aattagggtta 28476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 16362750 - 16362651
Alignment:
Q  156 ttgatgattttctaaaataag--ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||   |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  16362750 ttgatgattttctaaaataatgtttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttaaacaaactttgggatcaaattt 16362651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 24719855 - 24719949
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaa 249  Q
    |||||||||||||||||||| | ||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24719855 ttgatgattttctaaaataatgatttgggtcaagttttatatggttttgagtctctttagatgtatataaatgtttagacaaactttgggatcaa 24719949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 41373304 - 41373206
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||| |||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  41373304 ttgataattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaattt 41373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 4596004 - 4596104
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||| ||||||||||||||||| ||||||| ||||| |||| |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||    
T  4596004 aattaatgattttctaaaataatgttttgggtcaagttttatatggttttcagactcttttgatgtatataaatgttttgacaaactttgggatcaaatt 4596103  T
Q  253 t 253  Q
    |    
T  4596104 t 4596104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 21922619 - 21922719
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  21922619 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 21922718  T
Q  253 t 253  Q
    |    
T  21922719 t 21922719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 12710923 - 12710813
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||||||    
T  12710923 aatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttgttagttttgatgttataga 12710824  T
Q  135 aattagggtta 145  Q
    ||||| |||||    
T  12710823 aattaaggtta 12710813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 35895155 - 35895069
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagtttt 123  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||    
T  35895155 aatctaaggtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaacatgttgttttgttaatttt 35895069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 24719514 - 24719620
Alignment:
Q  44 ggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaattagg 141  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| || |||||||||||||||||||||||| |    
T  24719514 ggtaagggtgg-actagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattaag 24719612  T
Q  142 gttaaatt 149  Q
    ||||||||    
T  24719613 gttaaatt 24719620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 50544932 - 50544861
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  50544932 gatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 50544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 38056668 - 38056762
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtt 129  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||| |||||||| | ||| ||| |||||||||||||||||    
T  38056668 aatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtt 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 17901792 - 17901860
Alignment:
Q  39 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  17901792 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaacatg 17901860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 635001 - 635064
Alignment:
Q  38 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttt 101  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  635001 atctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 13302993 - 13302924
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  13302993 gaggagaaccagagaatagaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat 13302924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 24007224 - 24007330
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac--atgttgtt-ttgttagttttgatgttatagaaa 136  Q
    ||||||||||||||||||||||||||||| ||||| | |||||| ||||| ||||  ||||||||   ||| ||| |||||||||||||||||||||| |    
T  24007224 ctaaggtaagggtgggactagctttctctgataat-gattgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttgatgttatagaga 24007322  T
Q  137 ttagggtt 144  Q
    ||||||||    
T  24007323 ttagggtt 24007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 21841603 - 21841501
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatg--tttagacaaacttttggatcaaa 250  Q
    |||||||||||||||||||||| ||||| | ||||  |||| |||||||||||||||||||||| |||||| |||  |||||||||| ||| | ||||||    
T  21841603 aattgatgattttctaaaataatgtttttggtcaaattttatatggttttgagtctcttttgatctatatacatgtttttagacaaattttggaatcaaa 21841504  T
Q  251 ttt 253  Q
    |||    
T  21841503 ttt 21841501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 22145666 - 22145729
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||| |||| |||||||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaac 22145729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 21239024 - 21239097
Alignment:
Q  16 aagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||  |  |||||||||||||    
T  21239024 aagataacctttcaatcgatcaatctaaggtatgggtgggactaactttctctaattctaagttgtatgattct 21239097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 6834230 - 6834162
Alignment:
Q  39 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  6834230 tctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaaaagggtttaacatg 6834162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 7703179 - 7703140
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatg 75  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7703179 caatctaaggtaagggtgggactagctttctctaataatg 7703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 7051914 - 7051970
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    ||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  7051914 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 7051970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8275988 - 8276052
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    |||||||||||||| |||||||||| |||||||||| || |||| ||||| |||| |||||||||    
T  8275988 ctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaac 8276052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 24723344 - 24723399
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  24723344 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 24723399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 51336532 - 51336467
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 105  Q
    |||||||||||||||||||| |||||||||||  |  ||||||||||||| |||| || |||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 51336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 16401963 - 16401897
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgtt 109  Q
    ||||||||||||||||||| | ||||||||||||||||| ||| ||||| |||  ||||||||||||||    
T  16401963 taaggtaagggtgggactaac-ttctctaataatgggtt-tataattctgaaatagggtttaacatgtt 16401897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 21168990 - 21168914
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||||||||||||| | || |||||||||||  | |||||||| |||||||||  | ||||| |||||||||    
T  21168990 caatctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgtt 21168914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 4595845 - 4595883
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  4595845 gatcaatctaaggtaagggtgagactaactttctctaat 4595883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 42913109 - 42913071
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  42913109 gatcaatctaaggtaagggtgagactaactttctctaat 42913071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 12327742 - 12327807
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 105  Q
    |||||||||||||| ||||| |||||||||||  |  ||||||||||||| |||| || |||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 12327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 44892343 - 44892242
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggt-tcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaat 251  Q
    ||||| |||||||||||||||| |||||||  ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | |||||||    
T  44892343 aattggtgattttctaaaataatgttttggggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaat 44892244  T
Q  252 tt 253  Q
    ||    
T  44892243 tt 44892242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 21188111 - 21188147
Alignment:
Q  117 tagttttgatgttatagaaattagggttaaattgcaa 153  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  21188111 tagttttgatgttatagaagttaggtttaaattgcaa 21188147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 37 - 253
Target Start/End: Original strand, 32607312 - 32607534
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttatag 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  32607312 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatag 32607411  T
Q  134 aaattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttg--atgtatataaatgttt 230  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |||| ||| ||||||||||||||||  || |||||||||||||    
T  32607412 aaattagagttaaattgcaaaattgataattttctaaaataatgttttggttcaagttttatatgtttttgagtctcttttgatatatatataaatgttt 32607511  T
Q  231 agacaaacttttggatcaaattt 253  Q
    ||||||||||| |||||||||||    
T  32607512 agacaaactttgggatcaaattt 32607534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 21398640 - 21398764
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaa-ggggtttaacatg---ttgttttgttagttttgatgttata 132  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  21398640 aatctaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaagggggtttaacatgtttttgttttgttagttttgatgttata 21398739  T
Q  133 gaaattagggttaaattgcaaaattg 158  Q
    |||||||||||| |||||||||||||    
T  21398740 gaaattagggtt-aattgcaaaattg 21398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 18744965 - 18744820
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttt 101  Q
    |||||| | |||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  18744965 gaggagaaccagagaagtgaacctttcaatcgatcaatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggttt 18744866  T
Q  102 aa-catgttgtt-ttgttagttttgatgttatagaaattagggtta 145  Q
    || | ||| ||| || ||||||||||||||||||||||||||||||    
T  18744865 aaccttgtagttgttattagttttgatgttatagaaattagggtta 18744820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 18744539 - 18744441
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18744539 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18744441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 39245966 - 39245868
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39245966 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 39245868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 23199553 - 23199651
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23199553 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttacacaaactttgggatcaaattt 23199651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 38620266 - 38620168
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38620266 ttgatgattttctaaaataacgttttgggtcatgttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 38620168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 29346813 - 29346713
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29346813 aattgatgattttctaaaataatatttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 29346714  T
Q  253 t 253  Q
    |    
T  29346713 t 29346713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 29349286 - 29349186
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29349286 aattgatgattttctaaaataatatttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 29349187  T
Q  253 t 253  Q
    |    
T  29349186 t 29349186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 29351759 - 29351659
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29351759 aattgatgattttctaaaataatatttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 29351660  T
Q  253 t 253  Q
    |    
T  29351659 t 29351659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 16063808 - 16063701
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatag 133  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| | ||| ||| |||||||||||||||||||||    
T  16063808 caatctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttatag 16063709  T
Q  134 aaattagg 141  Q
     |||||||    
T  16063708 gaattagg 16063701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 39364214 - 39364116
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39364214 ttgatgattttctaaaataatgttttgggtcaaattttatatggtttcgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 39364116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 264098 - 264197
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  264098 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgaatataaatgtttagacaaac-tttggatcaaatt 264196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 23065346 - 23065248
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||| |||||||||||||| |||||||   ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23065346 ttgataattttctaaaataatgttttggggaaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 23065248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 23199207 - 23199313
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaatt 138  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||| | ||| ||| ||  ||||||||||||||||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttgatgttatagaaatt 23199306  T
Q  139 agggtta 145  Q
    |||||||    
T  23199307 agggtta 23199313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 6551251 - 6551392
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttt 101  Q
    |||||| | ||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||  |  ||||||| ||||| |||| ||||||    
T  6551251 gaggagaaccagagaagataacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggttt 6551350  T
Q  102 aa-catgttgtt-ttgttagttttgatgttatagaaattagg 141  Q
    || | ||| ||| ||||||| ||||||||||||| |||||||    
T  6551351 aaccttgtagttgttgttagatttgatgttataggaattagg 6551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 10732267 - 10732367
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  10732267 aattgatgattttctaaaataatgtttttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 10732366  T
Q  253 t 253  Q
    |    
T  10732367 t 10732367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 42244692 - 42244792
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  42244692 aattgatgattttctaaaataatgtttttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 42244791  T
Q  253 t 253  Q
    |    
T  42244792 t 42244792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 1627071 - 1627174
Alignment:
Q  45 gtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaaggggtttaacatgttgtt--ttgttagttttgatgttatagaaattagg 141  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||| | |  | ||  |||||||||||||||||||||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaaagggtttacccttgtatttattgttagttttgatgttatagaaattagg 1627170  T
Q  142 gtta 145  Q
    ||||    
T  1627171 gtta 1627174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 660841 - 660736
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt-ttgttagttttgatgttatagaaatt 138  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||| || || | | ||| ||| ||||||||||||||||||||||||||    
T  660841 ctaaggtaaggg-gggactagctttctctaataaggggttgtataattctgaaaaaggtttaaccttgtagttgttgttagttttgatgttatagaaatt 660743  T
Q  139 agggtta 145  Q
     ||||||    
T  660742 tgggtta 660736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 31622023 - 31621957
Alignment:
Q  46 taagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  31622023 taagggtggaactatctttctctaataattggttgtatgattctaaaaatgggtttaacatgttgtt 31621957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 20909846 - 20909745
Alignment:
Q  154 aattgatgattttct-aaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaat 251  Q
    ||||||||||||| | |||||||  |||||| ||||  |||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  20909846 aattgatgatttttttaaaataatattttgggtcaatttttatatggttttgagtcttttttgatgtatataattgtttagacaaactttgggatcaaat 20909747  T
Q  252 tt 253  Q
    ||    
T  20909746 tt 20909745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 21617889 - 21617958
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | |||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||    
T  21617889 gaggagaaccagagaagagaacctttcgatcgataaatctaaggtaagggtgggactaactttctctaat 21617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 22111977 - 22111911
Alignment:
Q  94 aggggtttaacatgttgtt---ttgttagttttgatgttatagaaattagggttaaattgcaaaattg 158  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||    
T  22111977 aggggtttaacatgttgttgttttgttagttttgatgttatagaaattagggtt-aattgcaaaattg 22111911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 660340 - 660287
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtt 229  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  660340 gttttggttcaagtttgatatggttttgagtctcttttgatgtatataaatgtt 660287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 20469153 - 20469206
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||| ||||| || ||||||||||||||||||||||||||| |||||||||||    
T  20469153 gagaagctttcgatcgatcaatctaaggtaagggtgggactaactttctctaat 20469206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 14025965 - 14026065
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  14025965 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 14026064  T
Q  253 t 253  Q
    |    
T  14026065 t 14026065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 20313332 - 20313263
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||| ||||| |||  ||||||||||||    
T  20313332 caatctaaggtaagggtgggactagc-ttctctaatagtgggtt-tataattctgaaatagggtttaacatg 20313263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 21504114 - 21504082
Alignment:
Q  117 tagttttgatgttatagaaattagggttaaatt 149  Q
    |||||||||||||||||||||||||||||||||    
T  21504114 tagttttgatgttatagaaattagggttaaatt 21504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 31622173 - 31622098
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    |||||||||||||||||||| || |||||||||||  | |||||||| ||||| |||  | ||||| |||||||||    
T  31622173 aatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgtt 31622098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 21300040 - 21300074
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||| |||||||||||    
T  21300040 aatctaaggtaagggtgggactaactttctctaat 21300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 20566605 - 20566568
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  20566605 atcaatctaaggtaagggtgagactaactttctctaat 20566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 21503789 - 21503712
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| |||| |||| ||||||||||||  ||||| |||| || ||||||||||||||  ||| | |||||||||    
T  21503789 gttttggtccaagttttatatggttttgagtgccttttcatgtttagaaatgtttagacaagttttggaatcaaattt 21503712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 8504046 - 8504146
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| ||||||||||||  |||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  8504046 aattggtgaatttctaaaataatattttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 8504145  T
Q  253 t 253  Q
    |    
T  8504146 t 8504146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 8833364 - 8833464
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||| | ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  8833364 aattggtgaatttctaaaataatgtttttggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 8833463  T
Q  253 t 253  Q
    |    
T  8833464 t 8833464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 36508633 - 36508697
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 105  Q
    ||||||||||||| ||||| |||||||||||  |  ||||||||||||| |||| || |||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 36508697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 38 - 253
Target Start/End: Complemental strand, 55583251 - 55583032
Alignment:
Q  38 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttataga 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||    
T  55583251 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattataaaaaggggtttaacatgttgttgttttgttagttttgatgttataga 55583152  T
Q  135 aattagggttaaattgcaaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttaga 233  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||||   |||| || | || |||||||||||    
T  55583151 aattagggttaaattgcaaaattgatgattttctaaaataatgttttggtccaagttttatatggttttgagtgcattttcatatttagaaatgtttaga 55583052  T
Q  234 caaacttttggatcaaattt 253  Q
    |||  ||| |||||||||||    
T  55583051 caagttttgggatcaaattt 55583032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 9622548 - 9622419
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgtta 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  9622548 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgtta 9622449  T
Q  131 tagaaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||||||||||||||||||||    
T  9622448 tagaaattagggttaaattgcaaaattgat 9622419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 10273439 - 10273350
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgat 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  10273439 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataacatgttgttttgttaattttgat 10273350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 7640518 - 7640616
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7640518 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 7640616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 14631195 - 14631081
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||    
T  14631195 gatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtta 14631096  T
Q  131 tagaaattagggtta 145  Q
    |||||||||||||||    
T  14631095 tagaaattagggtta 14631081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 15117684 - 15117782
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15117684 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 15117782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 18238944 - 18239042
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18238944 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18239042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 3485801 - 3485701
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3485801 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 3485702  T
Q  253 t 253  Q
    |    
T  3485701 t 3485701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 12033101 - 12033201
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12033101 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 12033200  T
Q  253 t 253  Q
    |    
T  12033201 t 12033201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 25031097 - 25030997
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25031097 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 25030998  T
Q  253 t 253  Q
    |    
T  25030997 t 25030997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 2424782 - 2424880
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||| |||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2424782 ttgatgattttttaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 2424880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 19243533 - 19243435
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||| ||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19243533 ttgatgattttctataataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 19243435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 25513907 - 25513797
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca-tgttgtt-ttgttagttttgatgttataga 134  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||| ||| ||| ||||||||||||||||||||||    
T  25513907 aatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgatgttataga 25513808  T
Q  135 aattagggtta 145  Q
    |||||||||||    
T  25513807 aattagggtta 25513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 44772415 - 44772513
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  44772415 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggattaaattt 44772513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 18022944 - 18022845
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctctttt-gatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18022944 ttgatgattttctaaaataatgttttgggtcaagttttatatgattttgagtctctttttgatgtatataaatgtttagacaaactttgggatcaaattt 18022845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 1836850 - 1836936
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttt 241  Q
    |||||||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1836850 ttgatgattttctaaaataatgttttgggtcaagttttatgtggttttgagtctcttttgatgtatataaatgtttagacaaacttt 1836936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 14873415 - 14873512
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaa 250  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  14873415 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatggttagacaagtttttggatcaaa 14873512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 16296998 - 16296897
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||| | || ||| ||||||||||||||||||    
T  16296998 gatcaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgtta 16296899  T
Q  131 ta 132  Q
    ||    
T  16296898 ta 16296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 29268188 - 29268088
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  29268188 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 29268089  T
Q  253 t 253  Q
    |    
T  29268088 t 29268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 44616123 - 44616023
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  44616123 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 44616024  T
Q  253 t 253  Q
    |    
T  44616023 t 44616023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 50221668 - 50221767
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  50221668 aattgatgattttctaaaataatgttttgg-tcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 50221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 26446260 - 26446153
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||| |||||||| |||||||||||||||||||||||||||||| ||||| ||||  ||||||| | ||| ||| |||||||||||||||||||||||||    
T  26446260 ctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgttgttagttttgatgttatagaaat 26446161  T
Q  138 tagggtta 145  Q
    ||||||||    
T  26446160 tagggtta 26446153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 26445746 - 26445677
Alignment:
Q  184 tcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26445746 tcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 26445677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 14718042 - 14718142
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  14718042 aattgatgattttctaaaataatgtttttgatcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 14718141  T
Q  253 t 253  Q
    |    
T  14718142 t 14718142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 16296881 - 16296819
Alignment:
Q  85 attctaaaaaggggtttaacat---gttgttttgttagttttgatgttatagaaattagggtt 144  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  16296881 attctaaaaaggggtttaacatattgttgttttgttagttttgatgttatagaaattagggtt 16296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 9639066 - 9638999
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||| |||||||||    
T  9639066 aatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaac 9638999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 13847267 - 13847200
Alignment:
Q  27 tcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaa 94  Q
    ||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  13847267 tcaatcgattaacctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaa 13847200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 12424290 - 12424355
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattct--aaaaaggggtttaac 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 12424355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 35661002 - 35660906
Alignment:
Q  47 aagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaattagg 141  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||  ||||||| | ||| ||| ||||||||||||||||||||  |||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgttagttttgatgttatatgaattagg 35660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 33186955 - 33186892
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  33186955 taaggtaggggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 33186892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 15239810 - 15239879
Alignment:
Q  35 tcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||| | ||| |||| |||||||||    
T  15239810 tcaatctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaac 15239879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 2424386 - 2424492
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||| ||||| |||||||||||  |  ||||||| ||| | |||| |||||||| | ||| ||| || ||||||||||||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagttgttattagttttgatgttatagaaat 2424485  T
Q  138 tagggtt 144  Q
    |||||||    
T  2424486 tagggtt 2424492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 19434551 - 19434607
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    ||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  19434551 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19434607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 19566076 - 19566176
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  19566076 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 19566175  T
Q  253 t 253  Q
    |    
T  19566176 t 19566176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 33186796 - 33186696
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| |||||||||||| |||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  33186796 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgtcttatcatgtatagaaatggttagacaagttttggaatcaaatt 33186697  T
Q  253 t 253  Q
    |    
T  33186696 t 33186696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 44023761 - 44023861
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||| | ||||| |||| |||||||||||| |||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  44023761 aattggtgattttctaaaataatgtttttggtcaagttttatatggttttgagtgtcttatcatgtatagaaatggttagacaagttttggaatcaaatt 44023860  T
Q  253 t 253  Q
    |    
T  44023861 t 44023861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 15115282 - 15115244
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  15115282 gatcaatctaaggtaagggtgggactaactttctctaat 15115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 37019730 - 37019652
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||||| ||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  37019730 gatcaatctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgt 37019652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 12424451 - 12424551
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| |||||||||||| |||| | |||| || ||||| ||||||||  ||| | ||||||||    
T  12424451 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtttcttatcatgtttagaaatggttagacaagttttggaatcaaatt 12424550  T
Q  253 t 253  Q
    |    
T  12424551 t 12424551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 15613171 - 15613072
Alignment:
Q  12 agagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||| ||||| ||| |||||||| || |||||||||||||||||||| | |||| ||||  |  ||||||| ||||| |||  || |||||||||||||    
T  15613171 agagaggagaagcttgcaattgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgt 15613072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 9924214 - 9924176
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  9924214 gatcaatctaaggtaagggtgagactaactttctctaat 9924176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 14549820 - 14549782
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  14549820 gatcaatctaaggtaagggtgagactaactttctctaat 14549782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 17143063 - 17143009
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    ||||| |||||||||||||  ||| ||||||| ||||| ||||||||||||||||    
T  17143063 tgggaatagctttctctaaagatgagttgtataattctgaaaaggggtttaacat 17143009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 10273273 - 10273196
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| |||| |||| ||||||||||||  ||||| |||| || ||||||||||| ||  ||| |||||||||||    
T  10273273 gttttggtccaagttttatatggttttgagtgccttttcatgtttagaaatgtttagaaaagttttgggatcaaattt 10273196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 14477606 - 14477573
Alignment:
Q  117 tagttttgatgttatagaaattagggttaaattg 150  Q
    ||||||||||||||||||| ||||||||||||||    
T  14477606 tagttttgatgttatagaagttagggttaaattg 14477573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 25513636 - 25513583
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagt 206  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||    
T  25513636 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagt 25513583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 45314157 - 45314194
Alignment:
Q  113 ttgttagttttgatgttatagaaattagggttaaattg 150  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  45314157 ttgttagttttgatgttatagagattagggttagattg 45314194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 46741093 - 46741040
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagt 206  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  46741093 aattggtgattttctaaaataatgttttgggtcaagttttatatggttttgagt 46741040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 11478768 - 11478868
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||| ||||||||||||||  |||||| ||||| |||| ||| ||||||||  ||| | ||||||| |||| |||||||||  ||| | ||||||||    
T  11478768 aattgataattttctaaaataatattttgggtcaagttttatatgattttgagtgccttatcatgtatagaaatttttagacaagttttggaatcaaatt 11478867  T
Q  253 t 253  Q
    |    
T  11478868 t 11478868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 33243452 - 33243552
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||  |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  33243452 aattggtgaatttctaaaataatgttttgggtcaaattttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 33243551  T
Q  253 t 253  Q
    |    
T  33243552 t 33243552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 10446273 - 10446147
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatag 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||    
T  10446273 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagtttcgatgttatag 10446174  T
Q  134 aaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||| |||||||||||||    
T  10446173 aaattagggttaatttgcaaaattgat 10446147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 18333924 - 18334022
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18333924 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18334022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 19858254 - 19858352
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19858254 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 19858352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 24423377 - 24423279
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24423377 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 24423279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 26923777 - 26923875
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26923777 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 26923875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 33865108 - 33865010
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33865108 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 33865010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 2290510 - 2290609
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactttt-ggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2290510 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaacttttgggatcaaattt 2290609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 22783058 - 22782960
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22783058 ttgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 22782960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 1540241 - 1540341
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1540241 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatttatataaatgtttagacaaactttgggatcaaatt 1540340  T
Q  253 t 253  Q
    |    
T  1540341 t 1540341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 21686329 - 21686429
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  21686329 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggataaaatt 21686428  T
Q  253 t 253  Q
    |    
T  21686429 t 21686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 12743152 - 12743052
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  12743152 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 12743053  T
Q  253 t 253  Q
    |    
T  12743052 t 12743052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 17882825 - 17882925
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  17882825 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 17882924  T
Q  253 t 253  Q
    |    
T  17882925 t 17882925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 23656233 - 23656133
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||||||||||||||||  |||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23656233 aattggtgattttctaaaataatattttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagacaaactttaggatcaaatt 23656134  T
Q  253 t 253  Q
    |    
T  23656133 t 23656133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 8055861 - 8055775
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttt 241  Q
    |||||||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8055861 ttgatgattttctaaaataatgttttgggtcaagttttatgtggttttgagtctcttttgatgtatataaatgtttagacaaacttt 8055775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 17318281 - 17318381
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||    
T  17318281 aattggtgattttctaaaataatgttttggatcaagttttatatggttttcagactcttttgatgtatataaatgttttgacaaactttgggatcaaatt 17318380  T
Q  253 t 253  Q
    |    
T  17318381 t 17318381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 33862629 - 33862529
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  33862629 aattgatgattttctaaaataatgtttttggtcaagttttatatgattttgagtctcttttgatctatataaatgtttagacaaattttggaatcaaatt 33862530  T
Q  253 t 253  Q
    |    
T  33862529 t 33862529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 21683074 - 21683171
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgttttgttagttttgatgttatagaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||| | ||| ||| |  ||||||||||||||||||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttgtagttttgatgttatagaaa 21683171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 29045325 - 29045257
Alignment:
Q  39 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  29045325 tctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaaaagggtttaacatg 29045257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 23658145 - 23658078
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||    
T  23658145 aatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaac 23658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 19825482 - 19825576
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtt 129  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||| || ||||| | ||| ||| |||||||||||||||||    
T  19825482 aatctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgttagttttgatgtt 19825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 1818927 - 1818884
Alignment:
Q  117 tagttttgatgttatagaaattagggttaaattgcaaaattgat 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1818927 tagttttgatgttatagaaattagggttaaattgcaaaattgat 1818884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 15998942 - 15998835
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||| ||||| |||||||||||  |  ||||||| ||||| |||| | ||||||| | || ||| |||||||||||||||||||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttatagaaat 15998843  T
Q  138 tagggtta 145  Q
    ||||||||    
T  15998842 tagggtta 15998835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 20410512 - 20410616
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaatt 138  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||| |||| || ||||| | ||| ||| || ||||||||||||  |||||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgttattagttttgatg--atagaaatt 20410609  T
Q  139 agggtta 145  Q
    |||||||    
T  20410610 agggtta 20410616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 18982631 - 18982561
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||| ||||||| || |||| |||||||||||||||||| ||||| |||| |||||||||    
T  18982631 atcaatctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaac 18982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 23501763 - 23501706
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggacta 59  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  23501763 gaggagaaccagagaagagaacctttcaatcgatcaatctaaggtaagggtgagacta 23501706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 15890704 - 15890782
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  15890704 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 15890782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 17856773 - 17856850
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||  |||| |||||||||||| |||||| |||| |||||| |||||||||||| ||  ||||||||||    
T  17856773 gttttggttcaacttttatatggttttgagtgtcttttcatgtttataaacgtttagacaaaccttgtgatcaaattt 17856850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 34140452 - 34140554
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| ||| | |||   ||||||| | ||| ||| |||||||||||||||||||||     
T  34140452 aatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattttgaaatctggtttaatcttgtagttgttgttagttttgatgttatagg 34140549  T
Q  135 aatta 139  Q
    |||||    
T  34140550 aatta 34140554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 2077135 - 2077072
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgt 218  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||| ||||||||||||||||||||    
T  2077135 ttgatgattttctaaaataatattttgggtcaagttttatatgattttgagtctcttttgatgt 2077072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 34153068 - 34153109
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggtt 79  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  34153068 aatctaaggtaagggtgggactagc-ttctctaataatgggtt 34153109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 18928618 - 18928518
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||  ||| | ||||||| ||||  ||||||||  ||| | ||||||||    
T  18928618 aattgatgattttctaaaataatgttttgggtcaagttttatatgattttgagtgccttatcatgtatagaaattgttagacaagttttggaatcaaatt 18928519  T
Q  253 t 253  Q
    |    
T  18928518 t 18928518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 22557142 - 22557042
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| || | ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  22557142 aattggtgattttctaaaataatgttttgggtcaagtttcatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 22557043  T
Q  253 t 253  Q
    |    
T  22557042 t 22557042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 28948634 - 28948579
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||    
T  28948634 atcaatctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 28948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 31734601 - 31734518
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaa 236  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||    
T  31734601 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaa 31734518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 10445893 - 10445807
Alignment:
Q  152 aaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaa 237  Q
    ||||||||||||||| |||||||| ||||| | ||| | |||  ||||||||||||  ||||| |||| || |||||||||||||||    
T  10445893 aaaattgatgattttgtaaaataatgtttttggtcatgttttgtatggttttgagtgccttttcatgtttagaaatgtttagacaaa 10445807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 18585879 - 18585809
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||| ||||  |||||| || |||||||||||||||| |||||||||||  |  |||||||||||||    
T  18585879 agaaccttgcaatcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 18585809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 13285804 - 13285739
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttta 102  Q
    ||||||||||||||||||||||| | |||| |||| ||| |||  || ||||| ||||||||||||    
T  13285804 aatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggttta 13285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 25601401 - 25601438
Alignment:
Q  113 ttgttagttttgatgttatagaaattagggttaaattg 150  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  25601401 ttgttagttttcatgttatagaaattagggttagattg 25601438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 18455231 - 18455331
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| |||| ||| |||||| |  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  18455231 aattggtgattttctaaaataatgttttgggtcaagttttatatgattttgattgccttatcatgtatagaaatggttagacaatttttggaatcaaatt 18455330  T
Q  253 t 253  Q
    |    
T  18455331 t 18455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 24267907 - 24267871
Alignment:
Q  35 tcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| |||||||||||||||||| |||||||||||    
T  24267907 tcaatcaaaggtaagggtgggactaactttctctaat 24267871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 28344985 - 28345107
Alignment:
Q  38 atctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgatgttatagaaat 137  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28344985 atctaagataagggtgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaacatgttgttttgttagtttcgatgttatagaaat 28345084  T
Q  138 tagggttaaattgcaaaattgat 160  Q
    ||||||||| |||||||||||||    
T  28345085 tagggttaatttgcaaaattgat 28345107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 23801552 - 23801477
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23801552 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 23801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 18809773 - 18809675
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18809773 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18809675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 23711345 - 23711443
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23711345 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 23711443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 26506209 - 26506111
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26506209 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 26506111  T

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Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 27920096 - 27920194
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27920096 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 27920194  T

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Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 149497 - 149610
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct---aaaaaggggtttaacatgtt---gttttgttagttttgatgtta 130  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| |||||   ||||||||||||||||||||   |||||||||||||||||||||    
T  149497 aatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgttttgttagttttgatgtta 149596  T
Q  131 tagaaattagggtt 144  Q
    ||||||||||||||    
T  149597 tagaaattagggtt 149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 38968312 - 38968212
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38968312 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 38968213  T
Q  253 t 253  Q
    |    
T  38968212 t 38968212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 39683146 - 39683047
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaactttt-ggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39683146 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaacttttgggatcaaattt 39683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 21315823 - 21315921
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21315823 ttgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 21315921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 21335258 - 21335372
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| || |||||||||||||||    
T  21335258 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgtta 21335357  T
Q  131 tagaaattagggtta 145  Q
    ||||||||| |||||    
T  21335358 tagaaattatggtta 21335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 21368999 - 21368901
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21368999 ttgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 21368901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 23131692 - 23131594
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23131692 ttgatgattttctaaaataatgttttgggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 23131594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 23134159 - 23134061
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23134159 ttgatgattttctaaaataatgttttgggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 23134061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 26508687 - 26508589
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  26508687 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctgttttgatgtatataaatgtttagacaaactttgggatcaaattt 26508589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 32038829 - 32038927
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  32038829 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtcttttttgatgtatataaatgtttagacaaactttgggatcaaattt 32038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 21315468 - 21315576
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| || |||||||||||||||    
T  21315468 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgtta 21315567  T
Q  131 tagaaatta 139  Q
    |||||||||    
T  21315568 tagaaatta 21315576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 24897525 - 24897625
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24897525 aattgatgattttctaaaataatgttttgggtcaagttttatgtggttttgagtctctttttatgtatataaatgtttagacaaactttgggatcaaatt 24897624  T
Q  253 t 253  Q
    |    
T  24897625 t 24897625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 24904962 - 24905062
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24904962 aattgatgattttctaaaataatgttttgggtcaagttttatgtggttttgagtctctttttatgtatataaatgtttagacaaactttgggatcaaatt 24905061  T
Q  253 t 253  Q
    |    
T  24905062 t 24905062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 34401854 - 34401952
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34401854 ttgatgattttctaaaataatgttttgggtcaaattttatatggtttcgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 34401952  T

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Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 572230 - 572130
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||| |||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  572230 aattgataattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatttatataaatgtttagacaaactttgggatcaaatt 572131  T
Q  253 t 253  Q
    |    
T  572130 t 572130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 24900008 - 24900108
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24900008 aattgatgattttctaaaataatattttgggtcaagttttatgtggttttgagtctctttttatgtatataaatgtttagacaaactttgggatcaaatt 24900107  T
Q  253 t 253  Q
    |    
T  24900108 t 24900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 24902485 - 24902585
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24902485 aattgatgattttctaaaataatattttgggtcaagttttatgtggttttgagtctctttttatgtatataaatgtttagacaaactttgggatcaaatt 24902584  T
Q  253 t 253  Q
    |    
T  24902585 t 24902585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 24907437 - 24907537
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||| |||||||||||||| ||||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24907437 aattgattattttctaaaataatgttttggctcaagttttatgtggttttgagtctctttttatgtatataaatgtttagacaaactttgggatcaaatt 24907536  T
Q  253 t 253  Q
    |    
T  24907537 t 24907537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 9785473 - 9785375
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  9785473 ttgatgattttctaaaataatattttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagataaactttgggatcaaattt 9785375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 21335613 - 21335711
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||| |||||||| ||||||  ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21335613 ttgatgattttttaaaataatgttttgagtcaaattttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 21335711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 21369349 - 21369239
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgttt-tgttagttttgatgttataga 134  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| ||||| |||| |||||||| | ||| |||| | |||||||||||||||||||    
T  21369349 aatctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtttatattagttttgatgttataga 21369250  T
Q  135 aattagggtta 145  Q
    |||||||||||    
T  21369249 aattagggtta 21369239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 23136400 - 23136300
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  23136400 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatctatataaatgtttagacaaattttagaatcaaatt 23136301  T
Q  253 t 253  Q
    |    
T  23136300 t 23136300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 22690569 - 22690472
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  22690569 ttgatgattttctaaaataatgttttgggtcaagttttata-ggttttgagtctcttttgaggtatataaatgtttagacaaactttgagatcaaattt 22690472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 22695165 - 22695068
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  22695165 ttgatgattttctaaaataatgttttgggtcaagttttata-ggttttgagtctcttttgaggtatataaatgtttagacaaactttgagatcaaattt 22695068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 23610679 - 23610572
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||  ||||||| | | | ||| ||||| |||||||||||||||||||    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgttgtttgttttgatgttatagaaat 23610580  T
Q  138 tagggtta 145  Q
    ||||||||    
T  23610579 tagggtta 23610572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 22686760 - 22686683
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||| |||| |||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||    
T  22686760 gttttggttcaagttttatatggttttgagtctttttttatgtgtataaatgtttagacaaactttgggatcaaattt 22686683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 23610354 - 23610268
Alignment:
Q  168 taaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||| ||||| | ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  23610354 taaaataatgtttttggtcaagttttatatggctttgagtctcttttgatgtatataaatgtttagacaaacttagggatcaaattt 23610268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 28577932 - 28577831
Alignment:
Q  159 atgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgt------atataaatgtttagacaaacttttggatcaaat 251  Q
    ||||||||||||||||| ||||||| ||||| |||| |||| |||||||||||||||||||      ||||||||||||||||||||||| |||||||||    
T  28577932 atgattttctaaaataatgttttgggtcaagttttatatggatttgagtctcttttgatgtatatgtatataaatgtttagacaaactttgggatcaaat 28577833  T
Q  252 tt 253  Q
    ||    
T  28577832 tt 28577831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 3539928 - 3539859
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  3539928 gaggagaaccagagaagagaacctttcaatcgatgaatctaaggtaagggtgggactaactttctctaat 3539859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 25584161 - 25584233
Alignment:
Q  91 aaaaggggtttaacatgtt---gttttgttagttttgatgttatagaaattagggttaaattgcaaaattgat 160  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  25584161 aaaaggggtttaacatgttgttgttttgttagttttgatgttatagaaattagggttaatttgtagaattgat 25584233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 34491239 - 34491364
Alignment:
Q  40 ctaaggtaagggtgggactagctttctct-aataatgggttgtatgattctaaaaaggggtttaaca-------tgttgttttgttagttttgatgttat 131  Q
    |||||||||||||||||||||| |||||| ||||| | ||||||| ||||| |||| ||||||||||       |||||||||| |||||||||||||||    
T  34491239 ctaaggtaagggtgggactagc-ttctctaaataacgagttgtataattctgaaaaagggtttaacatggttgttgttgttttg-tagttttgatgttat 34491336  T
Q  132 agaaattagggttaaattgcaaaattgat 160  Q
    | || |||||||| |||||||||||||||    
T  34491337 aaaatttagggtt-aattgcaaaattgat 34491364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 24516246 - 24516168
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  24516246 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 24516168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 28652530 - 28652663
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggt-tgtatgattctaaaaaggggtttaacat--gttgtt-tt 114  Q
    |||||||||| || ||||||||||||||||||||||||||| | |||  |||| ||  || ||||  ||||| |||| ||||||| | |  || ||| ||    
T  28652530 agaacctttcgatcgatcaatctaaggtaagggtgggactaaccttcattaatcataagtatgta--attctgaaaaagggtttagcctttgtagttgtt 28652627  T
Q  115 gttagttttgatgttatagaaattagggttaaattg 150  Q
    ||||||||||||||||||||||||||||||| ||||    
T  28652628 gttagttttgatgttatagaaattagggttagattg 28652663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 36734444 - 36734515
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    ||||||||||||||||||||||| || | ||||||||||||||||| ||| |||||||||  ||||||||||||    
T  36734444 atcaatctaaggtaagggtgggattaac-ttctctaataatgggtt-tataattctaaaatagggtttaacatg 36734515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 27852728 - 27852690
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27852728 gatcaatctaaggtaagggtgggactaactttctctaat 27852690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 2523747 - 2523817
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgttgt 2523817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 17307542 - 17307508
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||| |||||||||||    
T  17307542 aatctaaggtaagggtgggactaactttctctaat 17307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 22502027 - 22501993
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||| |||||||||||    
T  22502027 aatctaaggtaagggtgggactaactttctctaat 22501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 22509961 - 22509927
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||| |||||||||||    
T  22509961 aatctaaggtaagggtgggactaactttctctaat 22509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 25142260 - 25142226
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||| |||||||||||    
T  25142260 aatctaaggtaagggtgggactaactttctctaat 25142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 357934 - 357885
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 18387704 - 18387761
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggacta 59  Q
    |||||| | |||||| ||||| ||||| || ||||||||||| |||||||||||||||    
T  18387704 gaggagaaccagagaggagaagctttcgatcgatcaatctaaagtaagggtgggacta 18387761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 127339 - 127465
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttatag 133  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  127339 aatctaaggtaagggtgggactagctttctctaataatggattgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatag 127438  T
Q  134 aaattagggttaaattgcaaaattgat 160  Q
    | ||||||||||  |||||||||||||    
T  127439 agattagggttactttgcaaaattgat 127465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 127722 - 127824
Alignment:
Q  152 aaaattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaa 250  Q
    ||||||||||||||| |||||||| | |||||| |||| |||| ||||||||||||  ||||| |||| || ||||||||||||||  ||| | ||||||    
T  127722 aaaattgatgattttgtaaaataatgatttggtccaagttttatatggttttgagtgccttttcatgtttagaaatgtttagacaagttttggaatcaaa 127821  T
Q  251 ttt 253  Q
    |||    
T  127822 ttt 127824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 19912 - 19789
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatag 133  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  19912 aatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttgttagttttgatgttatag 19813  T
Q  134 aaattagggttaaattgcaaaattg 158  Q
    ||||||||||| |||||||||||||    
T  19812 aaattagggtt-aattgcaaaattg 19789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 5510 - 5445
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttta 102  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| |||| |||||||    
T  5510 aatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 11668 - 11603
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||| ||||||||||||||  ||||||||| |||||||||||| ||||| |||| |||||||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacat 11603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 10999 - 10881
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttatagaaat 137  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||    
T  10999 taaggtaagggtggaactagctttctctaataatgggttgtatgattctaaaaa-gggtttaacatgttgttgttttgttagttttgatgttatagaaat 10901  T
Q  138 tagggttaaattgcaaaattg 158  Q
    ||||||| |||||||||||||    
T  10900 tagggtt-aattgcaaaattg 10881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 75993 - 75867
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatag 133  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||     
T  75993 aatctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaacatgttgttgttttattagttttgatgttataa 75894  T
Q  134 aaattagggttaaattgcaaaattgat 160  Q
     |||||||| ||| ||||||| |||||    
T  75893 gaattagggataatttgcaaagttgat 75867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 73139 - 73017
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgt---tgttttgttagttttgatgttatagaaat 137  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||   |||||| |||||||| ||||||||  |||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttgttgttttattagtttttatgttataagaat 73040  T
Q  138 tagggttaaattgcaaaattgat 160  Q
    ||||||||| ||||||| |||||    
T  73039 tagggttaatttgcaaagttgat 73017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 111451 - 111347
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttt 101  Q
    |||||| | |||||| ||||| ||||| || ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  111451 gaggagaaccagagaggagaagctttcgatcgattaatctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggttt 111352  T
Q  102 aacat 106  Q
    |||||    
T  111351 aacat 111347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 66070 - 66138
Alignment:
Q  39 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||| ||||||||||||    
T  66070 tctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatg 66138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 8742 - 8854
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac---atgttgttttgttagttttgatgttatag 133  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||||    
T  8742 aatctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggttgaacctattgttgttttgttagttttgatgttatag 8841  T
Q  134 aaattagggttaa 146  Q
    |||||||||||||    
T  8842 aaattagggttaa 8854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 11160 - 11267
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca---tgttgttttgttagttttgatgttatagaaat 137  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||| ||||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttatcatgttgttgttttgttagttttgatgttatataaat 11259  T
Q  138 tagggtta 145  Q
    ||||||||    
T  11260 tagggtta 11267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 11508 - 11606
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11508 ttgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 11606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 17482 - 17627
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggttt 101  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||| ||||||    
T  17482 gaggagaaccagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggttt 17581  T
Q  102 aa-catgttgtt-ttgttagttttgatgttatagaaattagggtta 145  Q
    || | ||| ||| |||||||||||| ||||||||||||||||||||    
T  17582 aaccttgtagttgttgttagttttgctgttatagaaattagggtta 17627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 11811 - 11876
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttt 241  Q
    ||||| ||||||| |||| |||| |||||||  ||||| |||| |||||| |||||||||||||||    
T  11811 gttttagttcaagttttatatggatttgagtgcctttttatgtttataaacgtttagacaaacttt 11876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 2080 - 1966
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||    
T  2080 gatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtta 1981  T
Q  131 tagaaattagggtta 145  Q
    |||||||||||||||    
T  1980 tagaaattagggtta 1966  T

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Target: scaffold0878 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 3418 - 3528
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| | ||| ||| ||||||||||||||||||||||    
T  3418 aatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 3517  T
Q  135 aattagggtta 145  Q
    |||||||||||    
T  3518 aattagggtta 3528  T

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Target: scaffold0878; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 3927 - 4004
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||  |||| ||||||||||||||  |||||||| ||||||||||||||||||| || | |||||||||    
T  3927 gttttggttcaaattttatatggttttgagtcttatttgatgtgtataaatgtttagacaaacgttggaatcaaattt 4004  T

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Target: scaffold0134 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 38652 - 38554
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38652 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 38554  T

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Target: scaffold0023 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 95241 - 95143
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  95241 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 95143  T

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Target: scaffold0005 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 186188 - 186302
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgtta 130  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| ||||||||||||||||||    
T  186188 gatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtta 186287  T
Q  131 tagaaattagggtta 145  Q
    |||||||||||||||    
T  186288 tagaaattagggtta 186302  T

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Target: scaffold0444 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 14226 - 14126
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14226 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 14127  T
Q  253 t 253  Q
    |    
T  14126 t 14126  T

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Target: scaffold0109 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 5438 - 5538
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5438 aattgatgattttctaaaataatgttttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 5537  T
Q  253 t 253  Q
    |    
T  5538 t 5538  T

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Target: scaffold0109; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 135 - 235
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||||||||||||||||||||  |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  135 aattgatgattttctaaaataatattttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacgaactttgggatcaaatt 234  T
Q  253 t 253  Q
    |    
T  235 t 235  T

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Target: scaffold0032 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 62198 - 62296
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||| ||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  62198 ttgatgattttctagaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 62296  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 61844 - 61957
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt-ttgttagttttgatgttata--- 132  Q
    ||||||||||||||||| ||||| |||||||||||  |  ||||||| ||||| ||||||  || | | ||| ||| ||||||||||||||||||||       
T  61844 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaggatttaaccttgtagttgttgttagttttgatgttatatat 61943  T
Q  133 -gaaattagggtta 145  Q
     |||||||||||||    
T  61944 agaaattagggtta 61957  T

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Target: scaffold0029 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 12120 - 12022
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  12120 ttgatgattttctaaaataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgagatcaaattt 12022  T

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Target: scaffold0730 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 6501 - 6590
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttttgttagttttgat 126  Q
    |||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  6501 aatctaaggtaaaggcgggactacctttctctaataatgggttgtatgattctgaaaaggggtttaacatgttgttttgttaattttgat 6590  T

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Target: scaffold0546 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 7869 - 7769
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||||| ||||| ||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7869 aattgatgattttctaaaataatgttttgggtcaagttttatttgtttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaatt 7770  T
Q  253 t 253  Q
    |    
T  7769 t 7769  T

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Target: scaffold0254 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 21583 - 21483
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||| ||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  21583 aattgatgattttctataataatgttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttggaatcaaatt 21484  T
Q  253 t 253  Q
    |    
T  21483 t 21483  T

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Target: scaffold0369 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 15612 - 15721
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||| | ||| ||| ||||||||||||||||||||||    
T  15612 aatctaaggtaagggtgggactaactt-ctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 15710  T
Q  135 aattagggtta 145  Q
    |||||||||||    
T  15711 aattagggtta 15721  T

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Target: scaffold0369; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 16120 - 16197
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||| |||| ||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||    
T  16120 gttttggttcaagttttatatggttttgagtctcatttgatgtgtataaatgttcagacaaactttgggatcaaattt 16197  T

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Target: scaffold0203 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 18287 - 18385
Alignment:
Q  156 ttgatgattttctaaaataagtttt-ggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||| ||||| |||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18287 ttgatgattttctagaataattttttgggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 18385  T

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Target: scaffold0203; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 17936 - 18046
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttataga 134  Q
    ||||||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||| || |||||| | || ||| ||||||||||||||||||||||    
T  17936 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttataga 18035  T
Q  135 aattagggtta 145  Q
    |||||||||||    
T  18036 aattagggtta 18046  T

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Target: scaffold0146 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 22919 - 22821
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22919 ttgatgattttctaaaataatattttgggtcaatttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 22821  T

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Target: scaffold0063 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 39070 - 39168
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39070 ttgatgattttctaaaataatattttgggtaaagttttatatggttttgagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 39168  T

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Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 62612 - 62538
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatg 227  Q
    ||||| ||||||||||||||||  |||||| ||||| |||| |||||||||||| |||| | ||||||| |||||    
T  62612 aattggtgattttctaaaataatattttgggtcaagttttatatggttttgagtgtcttatcatgtatagaaatg 62538  T

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Target: scaffold0048 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 68719 - 68797
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  68719 atcaatctaaggtaagggtgggactacctttctctaataatgggttatatgattctaaaaacgggtttaacatgttgtt 68797  T

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Target: scaffold0232 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 4160 - 4064
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaat 251  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  4160 ttgatgattttctaaaataatgttttgggtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagacaaactctgggatcaaat 4064  T

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Target: scaffold0044 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 41232 - 41132
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||| ||||||||||||||||| ||||| | ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  41232 aattaatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatttatataaatgtttagacaaactttgggatcaaatt 41133  T
Q  253 t 253  Q
    |    
T  41132 t 41132  T

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Target: scaffold0695 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 6775 - 6677
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||  |||||| ||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6775 ttgatgattttctaaaataatattttgggtcaagttttatatgattttgagtctcttttgatgtatacaaatgtttagacaaactttgggatcaaattt 6677  T

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Target: scaffold0676 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 2937 - 2831
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| |||||||||| ||||||||||     
T  2937 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgatgttatagg 2838  T
Q  135 aattagg 141  Q
    |||||||    
T  2837 aattagg 2831  T

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Target: scaffold0676; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 2824 - 2762
Alignment:
Q  85 attctaaaaaggggtttaacatgttgt---tttgttagttttgatgttatagaaattagggtt 144  Q
    |||||||||||||||||||||||||||   ||||||| |||||||||||||||||||||||||    
T  2824 attctaaaaaggggtttaacatgttgtcgttttgttacttttgatgttatagaaattagggtt 2762  T

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Target: scaffold0630 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 8957 - 8859
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaat 251  Q
    ||||| ||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  8957 aattggtgattttctaaaataatcttttgggtcaagttttaaatggttttgagtctcttttgatgtatataaatgtttagataaactttgggatcaaat 8859  T

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Target: scaffold0040 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 13151 - 13249
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||||||||| ||||||| ||||  |||| |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13151 ttgatgattttctaaaataatgttttgggtcaaattttatatggtttctagtctcttttgatgtatataaatgtttagacaaactttgggatcaaattt 13249  T

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Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 106043 - 106098
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattc 88  Q
    ||||||||||||||||||||| ||||| |||||||||||  |  ||||||||||||    
T  106043 gatcaatctaaggtaagggtgtgactaactttctctaattctaagttgtatgattc 106098  T

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Target: scaffold0230 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 14782 - 14682
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||    
T  14782 aattgatgattttctaaaataatgtttttggtcaagttttatatggttttgagtctcttttgatgtatataaatgtttagataaattttggaatcaaatt 14683  T
Q  253 t 253  Q
    |    
T  14682 t 14682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 6663 - 6733
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct 89  Q
    |||||||| ||||  |||||| || |||||||||||||||| |||||||||||  |  |||||||||||||    
T  6663 agaaccttgcaatcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 6733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 61; Significance: 3e-26; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 135045 - 134945
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  135045 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 134946  T
Q  253 t 253  Q
    |    
T  134945 t 134945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 137514 - 137414
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  137514 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 137415  T
Q  253 t 253  Q
    |    
T  137414 t 137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 139983 - 139883
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  139983 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 139884  T
Q  253 t 253  Q
    |    
T  139883 t 139883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 142452 - 142352
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  142452 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 142353  T
Q  253 t 253  Q
    |    
T  142352 t 142352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 144921 - 144821
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    |||||||||||||||||||||| ||||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  144921 aattgatgattttctaaaataatgtttttggtcaagttttatatggtttcgagtctcttttgatgtatataaatgtttagacaaattttggaatcaaatt 144822  T
Q  253 t 253  Q
    |    
T  144821 t 144821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 3030 - 3070
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggacta 59  Q
    |||||||| |||| |||||||| ||||||||||||||||||    
T  3030 agaaccttgcaatcgatcaatccaaggtaagggtgggacta 3070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 18328 - 18221
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| ||||| |||||||| ||||||||||    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttggttttgattttatagaaat 18229  T
Q  138 tagggtta 145  Q
    ||||||||    
T  18228 tagggtta 18221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 67212 - 67143
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  67212 gaggagaaccagagaagagaacctttcaattgatcaatctaaggtaaaggtgggactaactttctctaat 67143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 1128 - 1008
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttg-ttttgttagttttgatgttatagaaatt 138  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||||| |||| |||||||| | ||| | | ||||||||||||||||| ||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgttttagaaatt 1029  T
Q  139 agggttaaattgcaaaattgat 160  Q
    | |||| |||||||||||||||    
T  1028 atggtt-aattgcaaaattgat 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 6310 - 6210
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||| ||||||||||| ||||||| ||||| |||| |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||    
T  6310 aattggtgatattctaaaataatgttttggatcaagttttatatggttttcagactcttttgatgtatataaatgttttgacaaactttgggatcaaatt 6211  T
Q  253 t 253  Q
    |    
T  6210 t 6210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 6987 - 7042
Alignment:
Q  198 gttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  6987 gttttgagtctcttttgatgtatgtaaatggttagacaaactttgggatcaaattt 7042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 6477 - 6408
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa 103  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||| | ||||| |||| ||| ||||    
T  6477 atcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaa 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 35181 - 35252
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  35181 caatctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaacatg 35252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 2304 - 2234
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||    
T  2304 caatctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaacat 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 5488 - 5585
Alignment:
Q  156 ttgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||||| ||||| ||||||  ||||| |||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  5488 ttgatgattttctagaataatgttttgagtcaagttttatatgattttgagtctcttttgatgtatataaatgtttagac-aactttgggatcaaattt 5585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 8900 - 8792
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaaggggtttaaca---tgttgttttgttagttttgatgttata 132  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||||   ||||||||||||| ||||||| ||  |    
T  8900 aatctaagttaagggtgggactagctttatctaataatggattgtatgattctgaaaagggggtttaacatgttgttgttttgttaattttgatttttga 8801  T
Q  133 gaaattagg 141  Q
    |||||||||    
T  8800 gaaattagg 8792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 2454 - 2562
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattct--aaaaaggggtttaa-catgttgt-tttgttagttttgatgttatagaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  |||||  ||||||| | ||| ||  || |||||||||||||||||||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaatggtttaaccttgtagtcgttattagttttgatgttatagaaa 2553  T
Q  137 ttagggtta 145  Q
    |||||||||    
T  2554 ttagggtta 2562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 7804 - 7879
Alignment:
Q  178 tttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||| | |||| |||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  7804 tttggttcatgttttatatggttttgaatctcttttgatgtatataaatgtttaaacaaactttgggatcaaattt 7879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 5304 - 5411
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||| |||||||| | ||| ||| ||||| |||||||||||||||| ||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgttgttcgttttgatgttatagatat 5403  T
Q  138 tagggtta 145  Q
    ||||||||    
T  5404 tagggtta 5411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 14005 - 13938
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  14005 aatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaac 13938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 14582 - 14689
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaaggggtttaacatgttgtt-ttgttagttttgatg-ttatag 133  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||  ||| ||| ||||||||||||||| ||| ||    
T  14582 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagag 14681  T
Q  134 aaattagg 141  Q
    ||||||||    
T  14682 aaattagg 14689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 23640 - 23747
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaaggggtttaacatgttgtt-ttgttagttttgatg-ttatag 133  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||  ||| ||| ||||||||||||||| ||| ||    
T  23640 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagag 23739  T
Q  134 aaattagg 141  Q
    ||||||||    
T  23740 aaattagg 23747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 12333 - 12241
Alignment:
Q  71 taatgggttgtatgattctaaaaaggggtttaacatgttg---ttttgttagttttgatgttatagaaattagggttaaattgcaaaattgat 160  Q
    |||| ||||||||||||||||||| | |||||||||||||   ||||||||||||||||||||||||||||| |||||| ||| | |||||||    
T  12333 taataggttgtatgattctaaaaatgagtttaacatgttgaagttttgttagttttgatgttatagaaattaaggttaatttgtagaattgat 12241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 4305 - 4215
Alignment:
Q  164 tttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | |||||||||    
T  4305 tttctaaaataatgttttggttcaatttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaattt 4215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 4988 - 4877
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac--atgttgtt-ttgttagttttgatgttatagaaat 137  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||||||||   ||| ||| |||||||||||||||||||||  ||    
T  4988 taaggtaagggtgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgatgttatagtgat 4890  T
Q  138 tagggttaaattg 150  Q
    |||||||| ||||    
T  4889 tagggttagattg 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 13362 - 13422
Alignment:
Q  11 cagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13362 cagagaatagaacctttcaatcgatcaatctaaggtaagggtgggactaactttctctaat 13422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 23587 - 23527
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggtt 23527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 40156 - 40268
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggt-tgta-tgattctaaaaaggggtttaac-atgttgtt-ttgttagttttgatgttat 131  Q
    |||||||||||||||||||||||| | ||||||||| ||| || | || | |||||||||| ||||||||| |||| ||| ||| |||||||||||||||    
T  40156 caatctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgttat 40255  T
Q  132 agaaattagggtt 144  Q
    |||| ||||||||    
T  40256 agaagttagggtt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 5685 - 5620
Alignment:
Q  41 taaggtaagggtgggactagctttctctaataatgggttgtatgattct--aaaaaggggtttaac 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 5524 - 5424
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| |||||||||||| |||| | |||| || ||||| ||||||||  ||| | ||||||||    
T  5524 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgtcttatcatgtgtagaaatggttagacaagttttggaatcaaatt 5425  T
Q  253 t 253  Q
    |    
T  5424 t 5424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 26786 - 26668
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac-atgttgtt-ttgttagttttgatgttat 131  Q
    ||||||||| ||||||||||||| || |||||||||||  | |||||||| ||||| |||| |||||||||  ||| ||| ||||||| |||||||||||    
T  26786 atcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaactttgtagttgttgttagctttgatgttat 26687  T
Q  132 agaaattagggttaaattg 150  Q
    ||| |||||||||| ||||    
T  26686 agagattagggttagattg 26668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 16412 - 16526
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatg-tta 130  Q
    |||||||||||||||||||| || || |||| |||||||||||||||||| ||||| |||| |||||||| | ||| ||| ||||||| ||||||| |||    
T  16412 atcaatctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgatta 16511  T
Q  131 tagaaattagggtta 145  Q
     ||||||||||||||    
T  16512 gagaaattagggtta 16526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 18696 - 18754
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaa 94  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||||| ||||| ||||    
T  18696 caatctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaa 18754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 24227 - 24322
Alignment:
Q  156 ttgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||||||| ||  |||||| ||||| |||| | ||||||   ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24227 ttgatgattttctaaaacaatattttgggtcaagttttataaggtttt---tctcttttgatgtatataaatgtttagacaaactttgcgatcaaattt 24322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 23959 - 23988
Alignment:
Q  116 ttagttttgatgttatagaaattagggtta 145  Q
    ||||||||||||||||||||||||||||||    
T  23959 ttagttttgatgttatagaaattagggtta 23988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 23893 - 23925
Alignment:
Q  42 aaggtaagggtgggactagctttctctaataat 74  Q
    |||||||||||| ||||||||||||||||||||    
T  23893 aaggtaagggtgagactagctttctctaataat 23925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 415 - 313
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatg--tttagacaaacttttggatcaaa 250  Q
    |||||||||||||||||||||| ||||| | ||||  |||| |||||||||||||||||||||| |||||| |||  |||||||||| ||| | ||||||    
T  415 aattgatgattttctaaaataatgtttttggtcaaattttatatggttttgagtctcttttgatctatatacatgtttttagacaaattttggaatcaaa 316  T
Q  251 ttt 253  Q
    |||    
T  315 ttt 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 10078 - 9976
Alignment:
Q  154 aattgatgattttctaaaataag-ttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatg--tttagacaaacttttggatcaaa 250  Q
    ||||||||||||||||||||||  |||| | ||||| |||| |||||||||||||||||||||| |||||| |||  |||||||||| ||| | ||||||    
T  10078 aattgatgattttctaaaataatatttttggtcaagttttatatggttttgagtctcttttgatctatatacatgtttttagacaaattttggaatcaaa 9979  T
Q  251 ttt 253  Q
    |||    
T  9978 ttt 9976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 13390 - 13435
Alignment:
Q  14 agaagagaacctttcaattgatcaatctaaggtaagggtgggacta 59  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  13390 agaagagaacctttcaatcgatcaatctaaggtaagggtgggacta 13435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 18636 - 18681
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgta 82  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18636 aatctaaggtaagggtgggactagctttctctaataatgagttgta 18681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 19263 - 19154
Alignment:
Q  37 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttataga 134  Q
    ||||||| ||||||||||||||| |||||||||||  |  ||||||| ||||| |||| |||||||| | ||| ||| || |||||||||||||||||||    
T  19263 aatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttataga 19164  T
Q  135 aattagggtt 144  Q
    ||| ||||||    
T  19163 aataagggtt 19154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 146814 - 146745
Alignment:
Q  2 gaggaggagcagagaagagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||    
T  146814 gaggagaaccagagaaaagaacctttcaatcgatcaatctaaggtatgggtgggactaacttactctaat 146745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 12464 - 12417
Alignment:
Q  113 ttgttagttttgatgttatagaaattagggttaaattgcaaaattgat 160  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||    
T  12464 ttgttagttttgatgttatagaaattagggtttatttgcaaaattgat 12417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 21671 - 21616
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattc 88  Q
    |||||||||||||||||||||||||||||||||||||||  |  ||||||||||||    
T  21671 gatcaatctaaggtaagggtgggactagctttctctaattctaagttgtatgattc 21616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 29565 - 29603
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  29565 gatcaatctaaggtaagggtgggactaactttctataat 29603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 43782 - 43851
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| |||  ||||||||||||    
T  43782 caatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaatagggtttaacatg 43851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 39090 - 39132
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggtt 79  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  39090 caatctaaggtaagggtgggactagc-ttctctaataatgggtt 39132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 198 - 120
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||||||||||||||||||||||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  198 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 5609 - 5653
Alignment:
Q  34 atcaatctaaggtaagggtgggactagctttctctaataatgggtt 79  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  5609 atcaatctaaggtaagggtgggactagc-ttctctaataatgggtt 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 578 - 478
Alignment:
Q  154 aattgatgattttctaaaataagtttt-ggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| |||| || ||||| |||| ||||||||||||  ||| | ||||||| ||||| |||||||| |||| | ||||||||    
T  578 aattggtgattttctaaaataattttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaatctttggaatcaaatt 479  T
Q  253 t 253  Q
    |    
T  478 t 478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 10604 - 10704
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| |||||||||||||||| ||||||| ||||| | || |||||||||||| |||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  10604 aattggtgattttctaaaataatgttttgggtcaagttgtatatggttttgagtgtcttatcatgtatagaaatggttagacaagttttggaatcaaatt 10703  T
Q  253 t 253  Q
    |    
T  10704 t 10704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 96455 - 96380
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    |||||||| |||| |||||||||| |||||||||||  || ||||||||||||| |||| || ||||||| |||||    
T  96455 caatctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgt 96380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 4701 - 4739
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  4701 gatcaatctaaggtaagggtgggactaactttctctaat 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 426 - 372
Alignment:
Q  52 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 106  Q
    |||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||    
T  426 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacat 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 19447 - 19353
Alignment:
Q  160 tgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||| |||| ||| ||||||| |||||  ||| ||||||||||||  ||||| |||| |||||||||||||||||| ||| | |||||||||    
T  19447 tgattttgtaaattaatgttttgggtcaagtgttatatggttttgagtgccttttcatgtttataaatgtttagacaaattttggaatcaaattt 19353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 2963 - 2870
Alignment:
Q  19 agaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgtt 112  Q
    ||||||||  |||| | ||||||||||||||||||||| || |||||||||||  | |||||||| ||||| |||  | ||||| |||||||||    
T  2963 agaaccttgtaattaaccaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgtt 2870  T

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Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 112943 - 112996
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||| ||||| || |||||||||||| |||||||||||||| |||||||||||    
T  112943 gagaagctttcgatcgatcaatctaagataagggtgggactaactttctctaat 112996  T

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Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 117784 - 117837
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||| ||||| || ||| || |||||||||||||||||||| |||||||||||    
T  117784 gagaagctttcgatcgataaaactaaggtaagggtgggactaactttctctaat 117837  T

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Target: scaffold0104 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 14940 - 14892
Alignment:
Q  106 tgttgttttgttagttttgatgttatagaaattagggttaaattgcaaa 154  Q
    ||||| |||||||||||||||||||||||| ||||| || |||||||||    
T  14940 tgttgctttgttagttttgatgttatagaagttaggtttgaattgcaaa 14892  T

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Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 16960 - 16912
Alignment:
Q  106 tgttgttttgttagttttgatgttatagaaattagggttaaattgcaaa 154  Q
    ||||| |||||||||||||||||||||||| ||||| || |||||||||    
T  16960 tgttgctttgttagttttgatgttatagaagttaggtttgaattgcaaa 16912  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 10086 - 10186
Alignment:
Q  154 aattgatgattttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaatt 252  Q
    ||||| ||| |||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | ||||||||    
T  10086 aattggtgaatttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaatt 10185  T
Q  253 t 253  Q
    |    
T  10186 t 10186  T

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Target: scaffold0337 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 3261 - 3143
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttatag 133  Q
    |||||||||||||||||||||||| | |||| |||| ||| ||  ||| ||| | |||| ||||||||  | || ||| ||| |||||||||||||||||    
T  3261 caatctaaggtaagggtgggactaaccttctttaatcatgagta-tataattatgaaaaagggtttaattttgtagttgttgatagttttgatgttatag 3163  T
Q  134 aaattagggttaaattgcaa 153  Q
    || ||||| |||||||||||    
T  3162 aagttaggtttaaattgcaa 3143  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 35551 - 35512
Alignment:
Q  32 tgatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  35551 tgatcaatctaaggtaagggtgagactaactttctctaat 35512  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 59651 - 59769
Alignment:
Q  36 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttatag 133  Q
    |||||||||||||||||||| ||| | |||| |||| ||| ||  ||| ||||| |||| ||||||||| | || ||| ||| |||||||||| ||||||    
T  59651 caatctaaggtaagggtgggtctaaccttctttaatcatgagta-tataattctgaaaaagggtttaactttgtagttgttgatagttttgatattatag 59749  T
Q  134 aaattagggttaaattgcaa 153  Q
    |||||||| ||| |||||||    
T  59750 aaattaggtttatattgcaa 59769  T

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Target: scaffold0401 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 8705 - 8615
Alignment:
Q  164 tttctaaaataa-gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    |||||||||||| ||||||| ||||| |||| ||||||||||||  ||| | ||||||| ||||| ||||||||  ||| | |||||||||    
T  8705 tttctaaaataatgttttgggtcaagttttatatggttttgagtgccttatcatgtatagaaatggttagacaagttttggaatcaaattt 8615  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 578 - 540
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  578 gatcaatctaaggtaagggtgagactaactttctctaat 540  T

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Target: scaffold0241 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 3242 - 3204
Alignment:
Q  33 gatcaatctaaggtaagggtgggactagctttctctaat 71  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  3242 gatcaatctaaggtaagggttggactaactttctctaat 3204  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 21483 - 21445
Alignment:
Q  215 atgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  21483 atgtatagaaatggttagacaaacttttggatcaaattt 21445  T

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Target: scaffold0468 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 11270 - 11347
Alignment:
Q  176 gttttggttcaaggtttacatggttttgagtctcttttgatgtatataaatgtttagacaaacttttggatcaaattt 253  Q
    ||||||||||||| |||| |||| ||||||| |||||  |||| || ||| ||||||||||||  | |||||||||||    
T  11270 gttttggttcaagttttatatggatttgagtgtctttacatgtttagaaacgtttagacaaaccctgggatcaaattt 11347  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 126282 - 126374
Alignment:
Q  18 gagaacctttcaattgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 111  Q
    ||||| |||||||| ||| || ||||||||||| |||||||| |||||||||||  |  ||||||||||||| |||  || ||||||| |||||    
T  126282 gagaagctttcaatcgattaagctaaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgt 126374  T

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Target: scaffold1256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 2199 - 2263
Alignment:
Q  40 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 104  Q
    ||||||||||||||||||||  ||||||||||  |  ||||||| ||||| |||| |||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaac 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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