View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0770_low_23 (Length: 245)

Name: NF0770_low_23
Description: NF0770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0770_low_23
NF0770_low_23
[»] chr7 (20 HSPs)
chr7 (141-245)||(36686054-36686158)
chr7 (141-245)||(30821060-30821164)
chr7 (141-245)||(38480181-38480285)
chr7 (18-76)||(11085112-11085170)
chr7 (18-76)||(30820937-30820995)
chr7 (27-76)||(11092850-11092899)
chr7 (19-76)||(15213812-15213869)
chr7 (25-76)||(36685938-36685989)
chr7 (31-76)||(9320423-9320468)
chr7 (177-245)||(8468256-8468326)
chr7 (177-245)||(14270266-14270336)
chr7 (177-245)||(45847862-45847932)
chr7 (18-76)||(15439398-15439457)
chr7 (210-245)||(59314-59350)
chr7 (210-245)||(8852087-8852123)
chr7 (210-245)||(11066562-11066598)
chr7 (210-245)||(12371372-12371408)
chr7 (206-238)||(30821180-30821212)
chr7 (210-245)||(32434511-32434547)
chr7 (206-238)||(36686174-36686206)
[»] chr3 (18 HSPs)
chr3 (141-245)||(31415348-31415452)
chr3 (141-245)||(31224758-31224862)
chr3 (141-245)||(15447801-15447905)
chr3 (18-76)||(15447681-15447739)
chr3 (18-76)||(11913034-11913092)
chr3 (18-76)||(31224635-31224693)
chr3 (35-76)||(6808250-6808291)
chr3 (210-245)||(1465675-1465711)
chr3 (206-238)||(15447921-15447953)
chr3 (206-245)||(17519823-17519863)
chr3 (206-245)||(17534685-17534725)
chr3 (210-245)||(22307505-22307541)
chr3 (210-245)||(30175436-30175472)
chr3 (206-238)||(31224878-31224910)
chr3 (206-238)||(31415300-31415332)
chr3 (210-245)||(40807090-40807126)
chr3 (210-245)||(41173241-41173277)
chr3 (48-76)||(49969963-49969991)
[»] chr5 (20 HSPs)
chr5 (141-245)||(17875158-17875262)
chr5 (141-245)||(21555183-21555288)
chr5 (145-245)||(21557853-21557953)
chr5 (141-245)||(31455021-31455125)
chr5 (141-245)||(31455634-31455738)
chr5 (141-245)||(12122325-12122429)
chr5 (141-245)||(30615700-30615804)
chr5 (18-76)||(12122202-12122260)
chr5 (20-76)||(31455193-31455249)
chr5 (20-76)||(31455806-31455862)
chr5 (18-76)||(21555060-21555118)
chr5 (18-76)||(21557726-21557784)
chr5 (18-76)||(30615868-30615926)
chr5 (18-76)||(36460283-36460341)
chr5 (31-76)||(24212481-24212526)
chr5 (31-76)||(35852736-35852781)
chr5 (206-238)||(12122445-12122477)
chr5 (206-238)||(21555304-21555336)
chr5 (206-238)||(31454973-31455005)
chr5 (206-238)||(31455586-31455618)
[»] chr8 (10 HSPs)
chr8 (141-245)||(21580010-21580115)
chr8 (141-245)||(29763672-29763775)
chr8 (141-245)||(41680926-41681029)
chr8 (18-76)||(21579887-21579945)
chr8 (18-76)||(29763549-29763607)
chr8 (141-234)||(22965704-22965797)
chr8 (18-76)||(42560208-42560266)
chr8 (26-76)||(3273252-3273302)
chr8 (210-245)||(6102633-6102669)
chr8 (206-238)||(21580131-21580163)
[»] scaffold1351 (2 HSPs)
scaffold1351 (141-245)||(1510-1614)
scaffold1351 (19-76)||(1679-1736)
[»] scaffold0395 (2 HSPs)
scaffold0395 (145-245)||(10839-10939)
scaffold0395 (31-76)||(11008-11053)
[»] scaffold0071 (3 HSPs)
scaffold0071 (141-245)||(14284-14388)
scaffold0071 (18-76)||(14453-14511)
scaffold0071 (206-238)||(14236-14268)
[»] chr4 (10 HSPs)
chr4 (141-245)||(33186046-33186150)
chr4 (18-76)||(33186215-33186273)
chr4 (18-76)||(13844685-13844744)
chr4 (31-76)||(15880810-15880855)
chr4 (177-245)||(362075-362145)
chr4 (206-245)||(10357358-10357398)
chr4 (210-245)||(10357306-10357342)
chr4 (210-245)||(15099169-15099205)
chr4 (210-245)||(19609418-19609454)
chr4 (206-238)||(33185998-33186030)
[»] chr2 (19 HSPs)
chr2 (141-245)||(22500933-22501037)
chr2 (141-245)||(22508867-22508971)
chr2 (141-245)||(24865574-24865678)
chr2 (141-235)||(7672356-7672450)
chr2 (19-76)||(7672240-7672297)
chr2 (19-76)||(24865452-24865509)
chr2 (26-76)||(2524418-2524468)
chr2 (30-76)||(22501102-22501148)
chr2 (30-76)||(22509036-22509082)
chr2 (206-245)||(9975019-9975059)
chr2 (210-245)||(5032246-5032282)
chr2 (210-245)||(6576307-6576343)
chr2 (206-238)||(20915151-20915183)
chr2 (206-238)||(22500885-22500917)
chr2 (206-238)||(22508819-22508851)
chr2 (210-245)||(22689774-22689810)
chr2 (210-245)||(22694370-22694406)
chr2 (210-245)||(24436138-24436174)
chr2 (210-245)||(24781762-24781798)
[»] chr6 (11 HSPs)
chr6 (141-245)||(20734251-20734354)
chr6 (18-76)||(20734128-20734186)
chr6 (18-76)||(27851315-27851373)
chr6 (33-76)||(22421080-22421123)
chr6 (25-76)||(34296957-34297008)
chr6 (31-76)||(2201232-2201277)
chr6 (18-76)||(25956537-25956596)
chr6 (210-244)||(27573027-27573061)
chr6 (141-194)||(25956661-25956714)
chr6 (210-245)||(17318992-17319028)
chr6 (210-245)||(18708594-18708630)
[»] scaffold0737 (3 HSPs)
scaffold0737 (141-245)||(6482-6585)
scaffold0737 (18-76)||(6359-6417)
scaffold0737 (206-245)||(5634-5674)
[»] chr1 (9 HSPs)
chr1 (141-245)||(51274392-51274496)
chr1 (20-76)||(12328538-12328594)
chr1 (31-76)||(8885510-8885555)
chr1 (39-76)||(51274290-51274327)
chr1 (177-245)||(41305818-41305888)
chr1 (141-194)||(28194489-28194542)
chr1 (210-245)||(35981952-35981988)
chr1 (210-245)||(48300957-48300993)
chr1 (206-238)||(51274512-51274544)
[»] scaffold0815 (1 HSPs)
scaffold0815 (141-223)||(450-532)
[»] scaffold0599 (2 HSPs)
scaffold0599 (18-76)||(4728-4786)
scaffold0599 (18-76)||(310-368)
[»] scaffold0810 (1 HSPs)
scaffold0810 (18-76)||(3077-3136)
[»] scaffold0632 (1 HSPs)
scaffold0632 (214-245)||(313-344)
[»] scaffold0116 (3 HSPs)
scaffold0116 (18-76)||(43700-43759)
scaffold0116 (18-76)||(47620-47679)
scaffold0116 (141-194)||(43824-43877)
[»] scaffold0371 (1 HSPs)
scaffold0371 (209-245)||(3010-3047)
[»] scaffold1137 (1 HSPs)
scaffold1137 (210-245)||(2556-2592)
[»] scaffold0509 (1 HSPs)
scaffold0509 (210-245)||(9680-9716)
[»] scaffold0434 (1 HSPs)
scaffold0434 (48-76)||(6770-6798)
[»] scaffold0384 (1 HSPs)
scaffold0384 (210-245)||(8308-8344)
[»] scaffold0375 (1 HSPs)
scaffold0375 (210-245)||(9224-9260)
[»] scaffold0064 (1 HSPs)
scaffold0064 (210-245)||(57894-57930)
[»] scaffold0045 (1 HSPs)
scaffold0045 (206-238)||(46993-47025)
[»] scaffold0026 (2 HSPs)
scaffold0026 (206-238)||(145833-145865)
scaffold0026 (210-245)||(145881-145917)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 36686054 - 36686158
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36686054 gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 36686153  T
Q  241 caaat 245  Q
    |||||    
T  36686154 caaat 36686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 30821060 - 30821164
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||| |||||||||||||||||||||||   | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30821060 gatggtaacttgctgcatatgtttaaatgatgttgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 30821159  T
Q  241 caaat 245  Q
    |||||    
T  30821160 caaat 30821164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 38480285 - 38480181
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||||||||||| |||||||||   | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38480285 gatggtgacttgctgcatatatttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatatctaagttgttaagttgtaagatgttgatc 38480186  T
Q  241 caaat 245  Q
    |||||    
T  38480185 caaat 38480181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 11085170 - 11085112
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11085170 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 11085112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 30820937 - 30820995
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  30820937 cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa 30820995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 11092899 - 11092850
Alignment:
Q  27 tgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11092899 tgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 11092850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 15213869 - 15213812
Alignment:
Q  19 agagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  15213869 agagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa 15213812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 36685938 - 36685989
Alignment:
Q  25 gatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  36685938 gatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa 36685989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 9320423 - 9320468
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  9320423 taagatgattaatattgatgatttattttgatgattaaatgtgaaa 9320468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 8468326 - 8468256
Alignment:
Q  177 cttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttgatccaaat 245  Q
    ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  8468326 cttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaat 8468256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 14270266 - 14270336
Alignment:
Q  177 cttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttgatccaaat 245  Q
    ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  14270266 cttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaat 14270336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 45847862 - 45847932
Alignment:
Q  177 cttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttgatccaaat 245  Q
    ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  45847862 cttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaat 45847932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 15439457 - 15439398
Alignment:
Q  18 cagagatgatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||| |||||||||| ||||||  |||||||| |||||||||||||||||||    
T  15439457 cagagaggatgactaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa 15439398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 59314 - 59350
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  59314 gtctaagttgtttaagttgtaagatgttgatccaaat 59350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 8852087 - 8852123
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8852087 gtctaagttgtttaagttgtaagatgttgatccaaat 8852123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 11066598 - 11066562
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11066598 gtctaagttgtttaagttgtaagatgttgatccaaat 11066562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 12371408 - 12371372
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12371408 gtctaagttgtttaagttgtaagatgttgatccaaat 12371372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 30821180 - 30821212
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  30821180 agatgtctaagttgttaagtcgtaagatgttga 30821212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 32434511 - 32434547
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32434511 gtctaagttgtttaagttgtaagatgttgatccaaat 32434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 36686174 - 36686206
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  36686174 agatgtctaagttgttaagtcgtaagatgttga 36686206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 31415452 - 31415348
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31415452 gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 31415353  T
Q  241 caaat 245  Q
    |||||    
T  31415352 caaat 31415348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 31224758 - 31224862
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31224758 gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtttaagttgttaagttgtaagatgttgatc 31224857  T
Q  241 caaat 245  Q
    |||||    
T  31224858 caaat 31224862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 15447801 - 15447905
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||| |||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15447801 gatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatc 15447900  T
Q  241 caaat 245  Q
    |||||    
T  15447901 caaat 15447905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 15447681 - 15447739
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15447681 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 15447739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 11913092 - 11913034
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  11913092 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa 11913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 31224635 - 31224693
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31224635 cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa 31224693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 6808291 - 6808250
Alignment:
Q  35 atgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  6808291 atgattaatattgatgatttactttgatgattaaatgtgaaa 6808250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 1465675 - 1465711
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1465675 gtctaagttgtttaagttgtaagatgttgatccaaat 1465711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 15447921 - 15447953
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  15447921 agatgtctaagttgttaagtcgtaagatgttga 15447953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 17519823 - 17519863
Alignment:
Q  206 agatgtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  17519823 agatgtctaagttgtttaagttataagatgttgatccaaat 17519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 17534685 - 17534725
Alignment:
Q  206 agatgtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  17534685 agatgtctaagttgtttaagttataagatgttgatccaaat 17534725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 22307505 - 22307541
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22307505 gtctaagttgtttaagttgtaagatgttgatccaaat 22307541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 30175436 - 30175472
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  30175436 gtctaagttgtttaagttgtaagatgttgatccaaat 30175472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 31224878 - 31224910
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  31224878 agatgtctaagttgttaagtcgtaagatgttga 31224910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 31415332 - 31415300
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  31415332 agatgtctaagttgttaagtcgtaagatgttga 31415300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 40807126 - 40807090
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40807126 gtctaagttgtttaagttgtaagatgttgatccaaat 40807090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 41173241 - 41173277
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41173241 gtctaagttgtttaagttgtaagatgttgatccaaat 41173277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 49969963 - 49969991
Alignment:
Q  48 atgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||||||||||||||||    
T  49969963 atgatttactttgatgattaaatgtgaaa 49969991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 17875262 - 17875158
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17875262 gatggtgacttgctgcatatgtttaaatgatattatcttgctgttgtgaagaattaataccattaagatgtctaagttgttaagttgtaagatattgatc 17875163  T
Q  241 caaat 245  Q
    |||||    
T  17875162 caaat 17875158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 21555183 - 21555288
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaatacca-ttaagatgtctaagttgttaagttgtaagatgttgat 239  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21555183 gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccatttaagatgtctaagttgttaagttgtaagatgttgat 21555282  T
Q  240 ccaaat 245  Q
    ||||||    
T  21555283 ccaaat 21555288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 21557853 - 21557953
Alignment:
Q  145 gtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaa 244  Q
    ||||||||||||||||||||||||||   | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21557853 gtgacttgctgcatatgtttaaatgatgttgtcttgctgttatgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaa 21557952  T
Q  245 t 245  Q
    |    
T  21557953 t 21557953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 31455125 - 31455021
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||| |||||||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31455125 gatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaagtaataccattaagatgtctaagttgttaagttgtaagatgttgatc 31455026  T
Q  241 caaat 245  Q
    |||||    
T  31455025 caaat 31455021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 31455738 - 31455634
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  31455738 gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaagtaataccattaagatgtctaagttgttaagttgtaagatgttgata 31455639  T
Q  241 caaat 245  Q
    |||||    
T  31455638 caaat 31455634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 12122325 - 12122429
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    ||||||||||||| ||||||||||||||||   | ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  12122325 gatggtgacttgcggcatatgtttaaatgatgatgtcttgctgttgtgatgaattaataccattgagatgtttaagttgttaagttgtaagatgttgatc 12122424  T
Q  241 caaat 245  Q
    |||||    
T  12122425 caaat 12122429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 30615804 - 30615700
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    ||||||||||||||||||||||||||| ||   | ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30615804 gatggtgacttgctgcatatgtttaaacgatgatgtcttgctgttgcgatgaattaataccattaagatgtataagttgttaagttgtaagatgttgatc 30615705  T
Q  241 caaat 245  Q
    |||||    
T  30615704 caaat 30615700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 12122202 - 12122260
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12122202 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 12122260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 31455249 - 31455193
Alignment:
Q  20 gagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31455249 gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa 31455193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 31455862 - 31455806
Alignment:
Q  20 gagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31455862 gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa 31455806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 21555060 - 21555118
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  21555060 cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaa 21555118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 21557726 - 21557784
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  21557726 cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaa 21557784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 30615926 - 30615868
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  30615926 cagagaggatgaataagatgattaatattgataatttacttttatgattaaatgtgaaa 30615868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 36460341 - 36460283
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  36460341 cagagaggatgaacaagatgattaataatgatgatttactttgatgattaaatgtgaaa 36460283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 24212526 - 24212481
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  24212526 taagatgattaatattgatgatttactttgatgattaaatgtgaaa 24212481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 35852781 - 35852736
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  35852781 taagatgattaatattgatgatttactttgatgattaaatgtgaaa 35852736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 12122445 - 12122477
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||||||||||||||||    
T  12122445 agatgtctaagttgttaagttgtaagatgttga 12122477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 21555304 - 21555336
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  21555304 agatgtctaagttgttaagtcgtaagatgttga 21555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 31455005 - 31454973
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  31455005 agatgtctaagttgttaagtcgtaagatgttga 31454973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 31455618 - 31455586
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  31455618 agatgtctaagttgttaagtcgtaagatgttga 31455586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 21580010 - 21580115
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaatacca-ttaagatgtctaagttgttaagttgtaagatgttgat 239  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21580010 gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccatttaagatgtctaagttgttaagttgtaagatgttgat 21580109  T
Q  240 ccaaat 245  Q
    ||||||    
T  21580110 ccaaat 21580115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 29763672 - 29763775
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||| |||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763672 gatggtga-ttgctgcatatgtttaaatgatgatgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 29763770  T
Q  241 caaat 245  Q
    |||||    
T  29763771 caaat 29763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 41680926 - 41681029
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||||||||||||||||||||    | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41680926 gatggtgacttgctgcatatgtttaaatggtgatgtcttgttgttgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatc 41681024  T
Q  241 caaat 245  Q
    |||||    
T  41681025 caaat 41681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 21579887 - 21579945
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21579887 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 21579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 29763549 - 29763607
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763549 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 29763607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 22965797 - 22965704
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatg 234  Q
    |||||||| ||| ||||||||||||||||    | |||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  22965797 gatggtgatttgatgcatatgtttaaatggtgttgtcttgctgttatgatgaatcaatactattaagatgtctaagttgttaagttttaagatg 22965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 42560208 - 42560266
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  42560208 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa 42560266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 3273302 - 3273252
Alignment:
Q  26 atgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||||| |||  ||||||  |||||||||||||||||||    
T  3273302 atgaataagatgattaatgttatggatttaagttgatgattaaatgtgaaa 3273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 6102633 - 6102669
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6102633 gtctaagttgtttaagttgtaagatgttgatccaaat 6102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 21580131 - 21580163
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  21580131 agatgtctaagttgttaagtcgtaagatgttga 21580163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 1614 - 1510
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||| |||||||||||||||||   | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1614 gatggtgacttgatgcatatgtttaaatgatgttgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 1515  T
Q  241 caaat 245  Q
    |||||    
T  1514 caaat 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 1736 - 1679
Alignment:
Q  19 agagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  1736 agagaggattaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 1679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 10939 - 10839
Alignment:
Q  145 gtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaa 244  Q
    ||||||||||||||||||||||||||   | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10939 gtgacttgctgcatatgtttaaatgatgttgtcttgctgttttgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaa 10840  T
Q  245 t 245  Q
    |    
T  10839 t 10839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 11053 - 11008
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||    
T  11053 taagatgattaatgttgatgatttactatgatgattaaatgtgaaa 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 14388 - 14284
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||| |||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14388 gatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagattttgatc 14289  T
Q  241 caaat 245  Q
    |||||    
T  14288 caaat 14284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 14511 - 14453
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14511 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 14453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 14268 - 14236
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  14268 agatgtctaagttgttaagtcgtaagatgttga 14236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 33186150 - 33186046
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||||||||| |||||||||||   | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33186150 gatggtgacttgctgcatttgtttaaatgatgatgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 33186051  T
Q  241 caaat 245  Q
    |||||    
T  33186050 caaat 33186046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33186273 - 33186215
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33186273 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 33186215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 13844744 - 13844685
Alignment:
Q  18 cagagatgatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||| |||||||||| ||||||| |||||||| |||||||||||||||||||    
T  13844744 cagagaggatgattaagatgatttaatattattgatttacgttgatgattaaatgtgaaa 13844685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 15880855 - 15880810
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||    
T  15880855 taagatgatcaatattgatgatttactttgattattaaatgtgaaa 15880810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 362145 - 362075
Alignment:
Q  177 cttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttgatccaaat 245  Q
    ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  362145 cttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaat 362075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 10357358 - 10357398
Alignment:
Q  206 agatgtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  10357358 agatgtctaagttgtttaagttgtaagatgttgatccaaat 10357398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 10357306 - 10357342
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10357306 gtctaagttgtttaagttgtaagatgttgatccaaat 10357342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 15099205 - 15099169
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15099205 gtctaagttgtttaagttgtaagatgttgatccaaat 15099169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 19609454 - 19609418
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19609454 gtctaagttgtttaagttgtaagatgttgatccaaat 19609418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 33186030 - 33185998
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  33186030 agatgtctaagttgttaagtcgtaagatgttga 33185998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 22501037 - 22500933
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||| |||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22501037 gatggtaacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatc 22500938  T
Q  241 caaat 245  Q
    |||||    
T  22500937 caaat 22500933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 22508971 - 22508867
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||| |||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22508971 gatggtaacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatc 22508872  T
Q  241 caaat 245  Q
    |||||    
T  22508871 caaat 22508867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 24865574 - 24865678
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||| |||||||||||||||||   | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24865574 gatggtgacttgatgcatatgtttaaatgatgttgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 24865673  T
Q  241 caaat 245  Q
    |||||    
T  24865674 caaat 24865678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 7672356 - 7672450
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgt 235  Q
    |||||||||||| |||||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7672356 gatggtgacttgatgcatacgtttaaatgatgctgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagtcgtaagatgt 7672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7672240 - 7672297
Alignment:
Q  19 agagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7672240 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 7672297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 24865452 - 24865509
Alignment:
Q  19 agagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24865452 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 24865509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 2524418 - 2524468
Alignment:
Q  26 atgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2524418 atgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa 2524468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 22501148 - 22501102
Alignment:
Q  30 ataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  22501148 ataagatgattaatattgatgatttactttgatgattaaatgtgaaa 22501102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 22509082 - 22509036
Alignment:
Q  30 ataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  22509082 ataagatgattaatattgatgatttactttgatgattaaatgtgaaa 22509036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 9975059 - 9975019
Alignment:
Q  206 agatgtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  9975059 agatgtctaagttgtttaagttgtaagatgttgatccaaat 9975019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 5032246 - 5032282
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5032246 gtctaagttgtttaagttgtaagatgttgatccaaat 5032282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 6576343 - 6576307
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6576343 gtctaagttgtttaagttgtaagatgttgatccaaat 6576307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 20915183 - 20915151
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  20915183 agatgtctaagttgttaagtcgtaagatgttga 20915151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 22500917 - 22500885
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  22500917 agatgtctaagttgttaagtcgtaagatgttga 22500885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 22508851 - 22508819
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  22508851 agatgtctaagttgttaagtcgtaagatgttga 22508819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 22689810 - 22689774
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22689810 gtctaagttgtttaagttgtaagatgttgatccaaat 22689774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 22694406 - 22694370
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22694406 gtctaagttgtttaagttgtaagatgttgatccaaat 22694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 24436174 - 24436138
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24436174 gtctaagttgtttaagttgtaagatgttgatccaaat 24436138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 24781762 - 24781798
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24781762 gtctaagttgtttaagttgtaagatgttgatccaaat 24781798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 20734251 - 20734354
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20734251 gatggtgacttgctgcatatgtttaaatggtgttgtcttgctgttgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatc 20734349  T
Q  241 caaat 245  Q
    |||||    
T  20734350 caaat 20734354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20734128 - 20734186
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  20734128 cagagaggatgaataaaatgatttatattgatgatttactttgatgattaaatgtgaaa 20734186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 27851373 - 27851315
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  27851373 cagagaggatgaataagatgatttatattgatgatttaccttgatgattaaatgtgaaa 27851315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 22421123 - 22421080
Alignment:
Q  33 agatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  22421123 agatgattaatattgatgatttactttgatgattaaatgtgaaa 22421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 34296957 - 34297008
Alignment:
Q  25 gatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  34296957 gatgaataagatgattaataatgatgatttactttgatgattagatgtgaaa 34297008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 2201277 - 2201232
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||    
T  2201277 taagatgattaatattgatgatttactttgatgattaaatatgaaa 2201232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 25956537 - 25956596
Alignment:
Q  18 cagagatgatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||| |||||||||| ||||||  |||||||| |||||||||||||||||||    
T  25956537 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa 25956596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 27573027 - 27573061
Alignment:
Q  210 gtctaagttgttaagttgtaagatgttgatccaaa 244  Q
    ||||||||||| |||||||||||||||||||||||    
T  27573027 gtctaagttgtgaagttgtaagatgttgatccaaa 27573061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 25956661 - 25956714
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 194  Q
    |||||| |||||||| ||||||||||||||   | |||||||||||||||||||    
T  25956661 gatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 25956714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 17318992 - 17319028
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17318992 gtctaagttgtttaagttgtaagatgttgatccaaat 17319028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 18708630 - 18708594
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18708630 gtctaagttgtttaagttgtaagatgttgatccaaat 18708594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 6482 - 6585
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||||||||||||||||||||    | ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6482 gatggtgacttgctgcatatgtttaaatggtgttgtcttgctattgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatc 6580  T
Q  241 caaat 245  Q
    |||||    
T  6581 caaat 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 6359 - 6417
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6359 cagagaggatgaataagatgattaataataatgatttactttgatgattaaatgtgaaa 6417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 5634 - 5674
Alignment:
Q  206 agatgtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  5634 agatctctaagttgtttaagttgtaagatgttgatccaaat 5674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 51274392 - 51274496
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 240  Q
    |||||||||||| ||||||||||||||||    | | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51274392 gatggtgacttgatgcatatgtttaaatgtttttgttttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc 51274491  T
Q  241 caaat 245  Q
    |||||    
T  51274492 caaat 51274496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 12328538 - 12328594
Alignment:
Q  20 gagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  12328538 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatttgaaa 12328594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 8885555 - 8885510
Alignment:
Q  31 taagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  8885555 taagatgattaatattgatgatttactttgatgattaaatgtgaaa 8885510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 51274290 - 51274327
Alignment:
Q  39 ttaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||||| |||||||||||||||||||||||||||||    
T  51274290 ttaatattgatgatttactttgatgattaaatgtgaaa 51274327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 41305818 - 41305888
Alignment:
Q  177 cttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttgatccaaat 245  Q
    ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  41305818 cttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaat 41305888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 28194489 - 28194542
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 194  Q
    |||||| |||||||| ||||||||||||||   | |||||||||||||||||||    
T  28194489 gatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 28194542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 35981952 - 35981988
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35981952 gtctaagttgtttaagttgtaagatgttgatccaaat 35981988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 48300993 - 48300957
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48300993 gtctaagttgtttaagttgtaagatgttgatccaaat 48300957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 51274512 - 51274544
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||||| ||||||||||||    
T  51274512 agatgtctaagttgttaagtcgtaagatgttga 51274544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 532 - 450
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaa 223  Q
    ||||||||||||||||||||||| ||||||   | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  532 gatggtgacttgctgcatatgttaaaatgatgttgtcttgctgttgtgatgaattaatatcattaagatgtctaagttgttaa 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 4786 - 4728
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  4786 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 368 - 310
Alignment:
Q  18 cagagatgatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  368 cagagaggatgaataagatgattaataatgatgatttactttgatgattatatgtgaaa 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3136 - 3077
Alignment:
Q  18 cagagatgatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||| |||||||||| ||||||  |||||||| |||||||||||||||||||    
T  3136 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 245
Target Start/End: Complemental strand, 344 - 313
Alignment:
Q  214 aagttgttaagttgtaagatgttgatccaaat 245  Q
    ||||||||||||||||||||||||||||||||    
T  344 aagttgttaagttgtaagatgttgatccaaat 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 43700 - 43759
Alignment:
Q  18 cagagatgatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||| |||||||||| ||||||  |||||||| |||||||||||||||||||    
T  43700 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa 43759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 47620 - 47679
Alignment:
Q  18 cagagatgatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaa 76  Q
    |||||| ||||| |||||||||| ||||||  |||||||| |||||||||||||||||||    
T  47620 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa 47679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 43824 - 43877
Alignment:
Q  141 gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 194  Q
    |||||| |||||||| ||||||||||||||   | |||||||||||||||||||    
T  43824 gatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 43877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 3047 - 3010
Alignment:
Q  209 tgtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3047 tgtctaagttgtttaagttgtaagatgttgatccaaat 3010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 2556 - 2592
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2556 gtctaagttgtttaagttgtaagatgttgatccaaat 2592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 9680 - 9716
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9680 gtctaagttgtttaagttgtaagatgttgatccaaat 9716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 6770 - 6798
Alignment:
Q  48 atgatttactttgatgattaaatgtgaaa 76  Q
    |||||||||||||||||||||||||||||    
T  6770 atgatttactttgatgattaaatgtgaaa 6798  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 8308 - 8344
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8308 gtctaagttgtttaagttgtaagatgttgatccaaat 8344  T

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Target: scaffold0375 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 9224 - 9260
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9224 gtctaagttgtttaagttgtaagatgttgatccaaat 9260  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 57930 - 57894
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  57930 gtctaagttgtttaagttgtaagatgttgatccaaat 57894  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 46993 - 47025
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    ||||||||||||||||||||||||| |||||||    
T  46993 agatgtctaagttgttaagttgtaaaatgttga 47025  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 145865 - 145833
Alignment:
Q  206 agatgtctaagttgttaagttgtaagatgttga 238  Q
    |||||||||||||||||| ||||||||||||||    
T  145865 agatgtctaagttgttaaattgtaagatgttga 145833  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 145917 - 145881
Alignment:
Q  210 gtctaagttgtt-aagttgtaagatgttgatccaaat 245  Q
    |||||||||||| ||||||||||||||||||||||||    
T  145917 gtctaagttgtttaagttgtaagatgttgatccaaat 145881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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