View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0771_high_12 (Length: 259)
Name: NF0771_high_12
Description: NF0771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0771_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 12494447 - 12494685
Alignment:
| Q |
20 |
gacatcatcatcccttatagcatactccactgtgataacacggtccataaacttgctgcacatcaaatataaaacaattaagccattgagatatatagcc |
119 |
Q |
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| T |
12494447 |
gacatcatcatcccttatagcatactccactgtgataacacggtccataaacttgctgcacatcaaatataaaacaattaagccattgagatatatagcc |
12494546 |
T |
|
| Q |
120 |
ccttaccatcattcctctccataaaagtggtggaatgtactatgtttctaaaggataaaacttgggaaaaataataactattcaacaactcaggtaatta |
219 |
Q |
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||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12494547 |
ccttaccatcattcctctccacaaaaatggtggaatgtactatgtttctaaaggataaaacttgggaaaaataataactattcaacaactcaggtaatta |
12494646 |
T |
|
| Q |
220 |
caacctcaggttagttgcttccaaagctttagtggcttc |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
12494647 |
caacctcaggttagttgcttccaaagctttagtggcttc |
12494685 |
T |
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