View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0771_low_15 (Length: 281)

Name: NF0771_low_15
Description: NF0771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0771_low_15
NF0771_low_15
[»] chr7 (48 HSPs)
chr7 (4-274)||(18253685-18253956)
chr7 (116-274)||(15862174-15862332)
chr7 (4-266)||(47480878-47481152)
chr7 (4-199)||(16478879-16479071)
chr7 (6-199)||(2437602-2437794)
chr7 (6-201)||(13572821-13573014)
chr7 (4-242)||(16211908-16212145)
chr7 (29-201)||(15760030-15760202)
chr7 (29-201)||(18979937-18980109)
chr7 (29-199)||(15950709-15950879)
chr7 (6-199)||(10989554-10989746)
chr7 (6-199)||(13910939-13911131)
chr7 (29-201)||(13758538-13758710)
chr7 (29-201)||(15927736-15927908)
chr7 (26-261)||(48622521-48622757)
chr7 (29-242)||(13321183-13321408)
chr7 (29-201)||(14250814-14250986)
chr7 (4-111)||(11580753-11580860)
chr7 (4-119)||(13037020-13037135)
chr7 (4-242)||(36052806-36053045)
chr7 (4-119)||(3060108-3060223)
chr7 (29-199)||(7822896-7823066)
chr7 (29-199)||(7830207-7830377)
chr7 (29-199)||(27101555-27101725)
chr7 (29-199)||(27108903-27109073)
chr7 (29-199)||(27176601-27176771)
chr7 (29-199)||(38783647-38783817)
chr7 (6-119)||(11516371-11516484)
chr7 (6-119)||(15441570-15441683)
chr7 (6-119)||(30262135-30262248)
chr7 (6-119)||(7293160-7293273)
chr7 (8-119)||(25292344-25292455)
chr7 (168-261)||(371417-371511)
chr7 (116-266)||(16418752-16418903)
chr7 (116-261)||(10000225-10000371)
chr7 (1-125)||(295966-296090)
chr7 (26-89)||(16914948-16915012)
chr7 (168-242)||(25124450-25124524)
chr7 (10-89)||(28722256-28722337)
chr7 (26-89)||(9611471-9611535)
chr7 (26-89)||(9839042-9839106)
chr7 (10-88)||(14935506-14935586)
chr7 (10-88)||(15358943-15359023)
chr7 (10-88)||(15363099-15363179)
chr7 (26-89)||(48356807-48356871)
chr7 (10-70)||(13448867-13448928)
chr7 (10-89)||(38424365-38424446)
chr7 (10-88)||(14271920-14272000)
[»] chr3 (52 HSPs)
chr3 (4-274)||(15936478-15936748)
chr3 (4-274)||(15938320-15938590)
chr3 (29-274)||(12901933-12902178)
chr3 (4-200)||(15614976-15615169)
chr3 (6-199)||(55316364-55316555)
chr3 (8-199)||(16821286-16821474)
chr3 (4-119)||(51158024-51158139)
chr3 (6-199)||(41270220-41270411)
chr3 (4-242)||(12030031-12030268)
chr3 (29-199)||(12264710-12264880)
chr3 (4-201)||(13839036-13839233)
chr3 (29-242)||(54651625-54651838)
chr3 (29-201)||(18911161-18911333)
chr3 (4-119)||(15859030-15859145)
chr3 (29-199)||(25058907-25059077)
chr3 (29-199)||(49232604-49232774)
chr3 (183-266)||(16933803-16933886)
chr3 (29-199)||(22275377-22275547)
chr3 (6-119)||(14842567-14842680)
chr3 (29-201)||(5228481-5228652)
chr3 (4-242)||(2049952-2050189)
chr3 (29-199)||(15468258-15468428)
chr3 (6-119)||(17912489-17912601)
chr3 (31-199)||(18896962-18897130)
chr3 (29-199)||(1467657-1467827)
chr3 (29-199)||(12812009-12812179)
chr3 (6-119)||(2449244-2449357)
chr3 (6-119)||(13975728-13975840)
chr3 (6-119)||(45860950-45861062)
chr3 (168-266)||(14285289-14285387)
chr3 (205-274)||(9302968-9303036)
chr3 (6-119)||(13954896-13955008)
chr3 (6-110)||(16744130-16744234)
chr3 (183-266)||(11477029-11477112)
chr3 (29-242)||(11986038-11986262)
chr3 (168-261)||(19947026-19947120)
chr3 (29-266)||(44229153-44229391)
chr3 (26-109)||(14080672-14080756)
chr3 (60-119)||(19231979-19232038)
chr3 (26-91)||(34560062-34560128)
chr3 (10-88)||(6228646-6228726)
chr3 (10-88)||(4145835-4145914)
chr3 (26-108)||(12953127-12953210)
chr3 (183-242)||(16261792-16261851)
chr3 (25-89)||(3576458-3576523)
chr3 (10-89)||(31412353-31412434)
chr3 (168-241)||(51960990-51961063)
chr3 (26-89)||(9590774-9590838)
chr3 (10-88)||(14814786-14814866)
chr3 (26-89)||(17191704-17191768)
chr3 (26-89)||(17204844-17204908)
chr3 (26-89)||(47784786-47784850)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-274)||(107886-108159)
scaffold0026 (6-201)||(64437-64635)
scaffold0026 (59-110)||(89863-89915)
[»] chr2 (40 HSPs)
chr2 (29-274)||(23777888-23778133)
chr2 (6-274)||(7507683-7507963)
chr2 (6-199)||(19886576-19886768)
chr2 (4-242)||(25265261-25265511)
chr2 (4-242)||(462880-463117)
chr2 (29-201)||(12728560-12728732)
chr2 (29-201)||(34824643-34824815)
chr2 (29-201)||(42177885-42178057)
chr2 (29-242)||(12641517-12641730)
chr2 (29-201)||(3798519-3798691)
chr2 (29-201)||(8944014-8944186)
chr2 (4-119)||(36982447-36982562)
chr2 (29-201)||(12635784-12635956)
chr2 (29-201)||(16935761-16935933)
chr2 (29-201)||(17006421-17006593)
chr2 (4-119)||(20627319-20627434)
chr2 (4-119)||(24341395-24341510)
chr2 (4-119)||(8891384-8891499)
chr2 (4-110)||(19794719-19794825)
chr2 (4-119)||(43642963-43643078)
chr2 (29-199)||(11231256-11231426)
chr2 (29-199)||(22513103-22513273)
chr2 (29-199)||(24685699-24685869)
chr2 (29-199)||(28775725-28775895)
chr2 (6-119)||(19689407-19689520)
chr2 (6-119)||(23820215-23820328)
chr2 (6-119)||(14906446-14906559)
chr2 (6-119)||(17396659-17396771)
chr2 (116-266)||(5888480-5888631)
chr2 (167-266)||(28031068-28031167)
chr2 (6-119)||(20015155-20015268)
chr2 (116-201)||(23774391-23774476)
chr2 (168-242)||(33128372-33128446)
chr2 (101-266)||(21142135-21142301)
chr2 (168-261)||(17204659-17204753)
chr2 (28-88)||(19669130-19669191)
chr2 (27-89)||(19660044-19660107)
chr2 (10-89)||(9636891-9636972)
chr2 (26-109)||(19666691-19666775)
chr2 (26-89)||(24884849-24884913)
[»] chr4 (43 HSPs)
chr4 (29-274)||(19020654-19020899)
chr4 (134-274)||(9795499-9795639)
chr4 (6-199)||(10644364-10644554)
chr4 (4-119)||(15675095-15675210)
chr4 (168-274)||(16523146-16523252)
chr4 (29-199)||(18169138-18169308)
chr4 (6-201)||(47357799-47357991)
chr4 (4-119)||(122031-122146)
chr4 (4-119)||(10104256-10104371)
chr4 (29-266)||(18248386-18248624)
chr4 (29-201)||(7131981-7132153)
chr4 (29-201)||(17145573-17145745)
chr4 (29-201)||(20000891-20001063)
chr4 (29-266)||(22738437-22738675)
chr4 (4-119)||(54118250-54118365)
chr4 (4-98)||(31115771-31115865)
chr4 (6-119)||(26680344-26680457)
chr4 (29-201)||(15287161-15287333)
chr4 (29-201)||(15294270-15294442)
chr4 (4-119)||(13246572-13246687)
chr4 (6-119)||(13048227-13048340)
chr4 (101-190)||(8378391-8378480)
chr4 (6-119)||(10488706-10488819)
chr4 (6-119)||(16327932-16328045)
chr4 (168-261)||(8045272-8045365)
chr4 (183-261)||(19697217-19697295)
chr4 (183-261)||(19707802-19707880)
chr4 (116-201)||(22351980-22352065)
chr4 (183-266)||(32460537-32460620)
chr4 (184-266)||(14500046-14500128)
chr4 (116-201)||(26339274-26339359)
chr4 (52-119)||(33240890-33240957)
chr4 (26-109)||(40885570-40885653)
chr4 (157-266)||(8378482-8378592)
chr4 (167-241)||(40885418-40885492)
chr4 (20-89)||(7964732-7964802)
chr4 (168-242)||(15674967-15675041)
chr4 (27-87)||(38764873-38764934)
chr4 (169-242)||(55376452-55376525)
chr4 (27-110)||(15013282-15013365)
chr4 (26-89)||(18276597-18276661)
chr4 (11-89)||(40904954-40905034)
chr4 (26-89)||(47535085-47535149)
[»] scaffold0075 (1 HSPs)
scaffold0075 (14-261)||(34312-34571)
[»] scaffold0032 (2 HSPs)
scaffold0032 (134-266)||(13201-13333)
scaffold0032 (26-89)||(104643-104707)
[»] scaffold0125 (1 HSPs)
scaffold0125 (4-266)||(41790-42063)
[»] chr6 (42 HSPs)
chr6 (29-266)||(13620644-13620882)
chr6 (4-200)||(1650021-1650214)
chr6 (29-201)||(1556173-1556345)
chr6 (13-238)||(35009314-35009551)
chr6 (29-201)||(16232060-16232232)
chr6 (4-242)||(23153589-23153828)
chr6 (6-199)||(27653898-27654090)
chr6 (29-201)||(18086739-18086911)
chr6 (13-201)||(15862622-15862822)
chr6 (6-199)||(25175708-25175901)
chr6 (29-201)||(23977937-23978109)
chr6 (13-201)||(1657660-1657860)
chr6 (29-242)||(29666041-29666255)
chr6 (6-160)||(16825705-16825861)
chr6 (29-201)||(19610186-19610358)
chr6 (29-199)||(16556057-16556227)
chr6 (29-199)||(16632613-16632783)
chr6 (168-274)||(18823209-18823315)
chr6 (168-274)||(18839064-18839170)
chr6 (29-199)||(22225656-22225826)
chr6 (6-111)||(14626132-14626237)
chr6 (29-199)||(10488867-10489037)
chr6 (29-199)||(16376291-16376461)
chr6 (29-199)||(16383615-16383785)
chr6 (35-199)||(22251484-22251648)
chr6 (101-199)||(19299477-19299575)
chr6 (183-261)||(19629663-19629740)
chr6 (183-261)||(16299825-16299903)
chr6 (40-242)||(27751603-27751816)
chr6 (168-258)||(32276601-32276691)
chr6 (116-201)||(29869692-29869777)
chr6 (183-261)||(15742058-15742137)
chr6 (183-261)||(18002333-18002412)
chr6 (26-89)||(18629628-18629692)
chr6 (183-242)||(26090074-26090133)
chr6 (27-88)||(29605614-29605675)
chr6 (26-109)||(16887792-16887876)
chr6 (10-89)||(17083218-17083298)
chr6 (135-242)||(23148270-23148377)
chr6 (26-110)||(17557017-17557101)
chr6 (26-86)||(25651400-25651461)
chr6 (26-89)||(35136033-35136096)
[»] chr8 (45 HSPs)
chr8 (4-201)||(24549124-24549318)
chr8 (4-199)||(6774175-6774367)
chr8 (6-197)||(21844490-21844679)
chr8 (6-199)||(21851881-21852072)
chr8 (6-201)||(16674306-16674499)
chr8 (29-199)||(22006176-22006346)
chr8 (29-242)||(16872926-16873139)
chr8 (6-199)||(30120867-30121060)
chr8 (29-201)||(13720844-13721016)
chr8 (29-201)||(16195399-16195571)
chr8 (4-118)||(16193723-16193837)
chr8 (167-274)||(16038713-16038819)
chr8 (4-111)||(43373482-43373589)
chr8 (29-201)||(13662181-13662353)
chr8 (167-274)||(2545264-2545371)
chr8 (4-119)||(24928797-24928912)
chr8 (4-111)||(16404989-16405096)
chr8 (13-198)||(17345720-17345917)
chr8 (29-199)||(271278-271448)
chr8 (29-199)||(644472-644642)
chr8 (29-199)||(830207-830377)
chr8 (29-199)||(22088712-22088882)
chr8 (6-119)||(5238231-5238344)
chr8 (6-119)||(22907220-22907333)
chr8 (6-119)||(24661254-24661367)
chr8 (6-119)||(43685690-43685803)
chr8 (101-199)||(15319077-15319175)
chr8 (101-199)||(15499446-15499544)
chr8 (183-261)||(22147771-22147849)
chr8 (183-259)||(18612739-18612815)
chr8 (168-261)||(3431114-3431208)
chr8 (183-266)||(22886669-22886753)
chr8 (183-266)||(21494290-21494373)
chr8 (26-89)||(26011657-26011721)
chr8 (6-50)||(222754-222798)
chr8 (6-50)||(691909-691953)
chr8 (6-50)||(736377-736421)
chr8 (6-50)||(860272-860316)
chr8 (26-89)||(15933461-15933525)
chr8 (10-89)||(33172374-33172455)
chr8 (10-88)||(22742910-22742990)
chr8 (26-109)||(23151833-23151917)
chr8 (30-89)||(23226096-23226156)
chr8 (26-89)||(25296321-25296385)
chr8 (26-89)||(25758341-25758405)
[»] scaffold0529 (1 HSPs)
scaffold0529 (4-201)||(3105-3301)
[»] chr5 (51 HSPs)
chr5 (4-199)||(29188201-29188393)
chr5 (13-261)||(34939428-34939688)
chr5 (29-201)||(23514729-23514901)
chr5 (6-201)||(27009986-27010179)
chr5 (6-199)||(25426773-25426965)
chr5 (6-199)||(12519-12711)
chr5 (6-199)||(18777907-18778099)
chr5 (6-199)||(19500044-19500236)
chr5 (6-199)||(21073510-21073702)
chr5 (6-199)||(22366396-22366588)
chr5 (4-119)||(18531073-18531188)
chr5 (29-199)||(11211983-11212153)
chr5 (4-242)||(23507107-23507344)
chr5 (29-201)||(1219436-1219608)
chr5 (29-201)||(35791014-35791186)
chr5 (6-199)||(43443312-43443502)
chr5 (4-119)||(22053839-22053954)
chr5 (29-199)||(10777888-10778058)
chr5 (6-199)||(4199900-4200092)
chr5 (29-201)||(7425492-7425664)
chr5 (4-242)||(27182429-27182668)
chr5 (29-199)||(17471506-17471676)
chr5 (29-199)||(21932299-21932469)
chr5 (29-199)||(21938469-21938639)
chr5 (29-199)||(35582204-35582374)
chr5 (29-199)||(36989688-36989858)
chr5 (6-119)||(20623113-20623226)
chr5 (6-119)||(21233534-21233647)
chr5 (168-261)||(9730216-9730310)
chr5 (6-119)||(25900412-25900525)
chr5 (29-119)||(37052911-37053001)
chr5 (6-119)||(16536341-16536454)
chr5 (113-195)||(22883006-22883088)
chr5 (183-266)||(17909838-17909921)
chr5 (116-201)||(23328812-23328897)
chr5 (116-201)||(24616416-24616501)
chr5 (116-201)||(24712792-24712877)
chr5 (116-201)||(24745810-24745895)
chr5 (183-266)||(7529243-7529326)
chr5 (29-242)||(32950862-32951086)
chr5 (26-109)||(21310709-21310793)
chr5 (27-109)||(29918129-29918212)
chr5 (168-241)||(25005137-25005210)
chr5 (26-89)||(23981536-23981600)
chr5 (27-89)||(22885806-22885869)
chr5 (170-242)||(2032135-2032207)
chr5 (170-242)||(18530946-18531018)
chr5 (26-89)||(19862372-19862436)
chr5 (26-89)||(21222628-21222692)
chr5 (26-89)||(21297195-21297259)
chr5 (10-88)||(24084223-24084303)
[»] chr1 (26 HSPs)
chr1 (6-199)||(22227953-22228146)
chr1 (6-199)||(22232650-22232843)
chr1 (4-200)||(45051565-45051758)
chr1 (4-200)||(2116397-2116590)
chr1 (6-199)||(5072304-5072495)
chr1 (4-200)||(41394364-41394559)
chr1 (6-163)||(18601068-18601225)
chr1 (6-119)||(20913174-20913287)
chr1 (6-119)||(20931489-20931602)
chr1 (29-192)||(17148735-17148898)
chr1 (4-242)||(20893509-20893747)
chr1 (7-119)||(20445824-20445936)
chr1 (29-199)||(18059676-18059846)
chr1 (7-119)||(20531589-20531701)
chr1 (101-201)||(46523629-46523728)
chr1 (183-274)||(20254646-20254736)
chr1 (29-199)||(17004806-17004976)
chr1 (9-119)||(37844456-37844566)
chr1 (101-199)||(19962417-19962515)
chr1 (29-199)||(38055009-38055179)
chr1 (6-119)||(51452636-51452749)
chr1 (116-201)||(22035702-22035787)
chr1 (116-201)||(7640850-7640935)
chr1 (26-89)||(17609091-17609155)
chr1 (10-88)||(21195160-21195240)
chr1 (26-109)||(22143361-22143445)
[»] scaffold0215 (2 HSPs)
scaffold0215 (4-261)||(9203-9458)
scaffold0215 (4-261)||(16101-16356)
[»] scaffold0139 (2 HSPs)
scaffold0139 (6-199)||(21031-21223)
scaffold0139 (6-199)||(13977-14168)
[»] scaffold0420 (1 HSPs)
scaffold0420 (4-199)||(13242-13434)
[»] scaffold0022 (1 HSPs)
scaffold0022 (6-199)||(5130-5323)
[»] scaffold0369 (1 HSPs)
scaffold0369 (6-201)||(3866-4062)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-274)||(48329-48610)
[»] scaffold0266 (2 HSPs)
scaffold0266 (4-242)||(3466-3703)
scaffold0266 (4-119)||(1266-1381)
[»] scaffold0023 (5 HSPs)
scaffold0023 (4-242)||(48740-48977)
scaffold0023 (29-201)||(153923-154095)
scaffold0023 (168-274)||(61048-61154)
scaffold0023 (6-199)||(36238-36430)
scaffold0023 (74-196)||(169830-169951)
[»] scaffold1711 (1 HSPs)
scaffold1711 (6-199)||(1220-1411)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-119)||(6070-6188)
[»] scaffold0132 (1 HSPs)
scaffold0132 (4-234)||(13648-13890)
[»] scaffold0195 (2 HSPs)
scaffold0195 (4-119)||(19348-19463)
scaffold0195 (4-119)||(21432-21547)
[»] scaffold0175 (1 HSPs)
scaffold0175 (4-119)||(962-1077)
[»] scaffold0467 (1 HSPs)
scaffold0467 (29-238)||(10218-10427)
[»] scaffold1500 (1 HSPs)
scaffold1500 (29-201)||(1430-1602)
[»] scaffold0761 (1 HSPs)
scaffold0761 (29-201)||(1491-1663)
[»] scaffold0162 (3 HSPs)
scaffold0162 (4-241)||(8051-8301)
scaffold0162 (4-242)||(26298-26536)
scaffold0162 (154-242)||(12049-12137)
[»] scaffold0025 (3 HSPs)
scaffold0025 (4-119)||(8991-9106)
scaffold0025 (4-119)||(148863-148978)
scaffold0025 (26-89)||(53509-53573)
[»] scaffold0066 (2 HSPs)
scaffold0066 (29-261)||(54584-54818)
scaffold0066 (29-266)||(45198-45437)
[»] scaffold0116 (1 HSPs)
scaffold0116 (6-201)||(180-371)
[»] scaffold0077 (1 HSPs)
scaffold0077 (4-119)||(36919-37034)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-119)||(51188-51303)
[»] scaffold0017 (1 HSPs)
scaffold0017 (26-261)||(54039-54275)
[»] scaffold1542 (1 HSPs)
scaffold1542 (4-119)||(540-655)
[»] scaffold0302 (1 HSPs)
scaffold0302 (4-119)||(12255-12370)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-119)||(123170-123285)
[»] scaffold0772 (1 HSPs)
scaffold0772 (7-125)||(5674-5792)
[»] scaffold0498 (1 HSPs)
scaffold0498 (4-242)||(9020-9257)
[»] scaffold0191 (1 HSPs)
scaffold0191 (101-199)||(7374-7472)
[»] scaffold0092 (1 HSPs)
scaffold0092 (101-199)||(10666-10764)
[»] scaffold0001 (3 HSPs)
scaffold0001 (4-242)||(172047-172284)
scaffold0001 (4-242)||(177750-177987)
scaffold0001 (183-261)||(164810-164888)
[»] scaffold0076 (2 HSPs)
scaffold0076 (6-199)||(43142-43333)
scaffold0076 (29-199)||(39271-39441)
[»] scaffold0218 (1 HSPs)
scaffold0218 (4-119)||(5067-5182)
[»] scaffold0106 (1 HSPs)
scaffold0106 (4-119)||(41871-41986)
[»] scaffold0028 (2 HSPs)
scaffold0028 (4-119)||(89460-89575)
scaffold0028 (28-89)||(79704-79766)
[»] scaffold0012 (2 HSPs)
scaffold0012 (4-119)||(247448-247563)
scaffold0012 (29-242)||(34033-34246)
[»] scaffold0008 (2 HSPs)
scaffold0008 (6-196)||(31593-31782)
scaffold0008 (4-119)||(128175-128290)
[»] scaffold0383 (1 HSPs)
scaffold0383 (29-201)||(2560-2733)
[»] scaffold0213 (1 HSPs)
scaffold0213 (101-199)||(29402-29500)
[»] scaffold0107 (2 HSPs)
scaffold0107 (29-199)||(31477-31647)
scaffold0107 (29-150)||(39814-39935)
[»] scaffold0615 (1 HSPs)
scaffold0615 (183-266)||(6043-6127)
[»] scaffold0141 (2 HSPs)
scaffold0141 (6-125)||(22684-22803)
scaffold0141 (6-119)||(26939-27052)
[»] scaffold0124 (1 HSPs)
scaffold0124 (6-119)||(1588-1701)
[»] scaffold0078 (1 HSPs)
scaffold0078 (6-119)||(37072-37185)
[»] scaffold0574 (1 HSPs)
scaffold0574 (183-266)||(9345-9429)
[»] scaffold0009 (1 HSPs)
scaffold0009 (4-240)||(272167-272402)
[»] scaffold0387 (2 HSPs)
scaffold0387 (166-261)||(7034-7129)
scaffold0387 (10-109)||(962-1063)
[»] scaffold0516 (1 HSPs)
scaffold0516 (101-261)||(11982-12143)
[»] scaffold0173 (1 HSPs)
scaffold0173 (167-266)||(5548-5647)
[»] scaffold0003 (1 HSPs)
scaffold0003 (116-266)||(7464-7615)
[»] scaffold0892 (1 HSPs)
scaffold0892 (26-163)||(3578-3715)
[»] scaffold0029 (1 HSPs)
scaffold0029 (183-266)||(49686-49769)
[»] scaffold0361 (1 HSPs)
scaffold0361 (32-266)||(3360-3601)
[»] scaffold0183 (1 HSPs)
scaffold0183 (116-201)||(6852-6937)
[»] scaffold0335 (1 HSPs)
scaffold0335 (168-266)||(5411-5508)
[»] scaffold0207 (1 HSPs)
scaffold0207 (168-266)||(18026-18124)
[»] scaffold0118 (1 HSPs)
scaffold0118 (168-266)||(34242-34340)
[»] scaffold0303 (1 HSPs)
scaffold0303 (184-266)||(4279-4362)
[»] scaffold0155 (1 HSPs)
scaffold0155 (118-201)||(23665-23748)
[»] scaffold0123 (1 HSPs)
scaffold0123 (26-109)||(8173-8257)
[»] scaffold0084 (1 HSPs)
scaffold0084 (29-242)||(55971-56195)
[»] scaffold0037 (1 HSPs)
scaffold0037 (183-261)||(95313-95392)
[»] scaffold0409 (2 HSPs)
scaffold0409 (10-109)||(1348-1449)
scaffold0409 (10-109)||(9603-9704)
[»] scaffold0138 (1 HSPs)
scaffold0138 (26-86)||(22452-22513)
[»] scaffold0700 (1 HSPs)
scaffold0700 (26-89)||(2688-2752)
[»] scaffold0193 (1 HSPs)
scaffold0193 (10-88)||(4751-4831)
[»] scaffold0151 (1 HSPs)
scaffold0151 (26-89)||(22442-22506)
[»] scaffold0058 (1 HSPs)
scaffold0058 (26-109)||(70307-70390)
[»] scaffold0053 (1 HSPs)
scaffold0053 (26-89)||(76867-76931)
[»] scaffold0598 (1 HSPs)
scaffold0598 (10-89)||(3397-3478)
[»] scaffold0160 (1 HSPs)
scaffold0160 (169-242)||(339-412)
[»] scaffold0004 (1 HSPs)
scaffold0004 (10-89)||(27643-27724)
[»] scaffold0483 (1 HSPs)
scaffold0483 (26-89)||(6824-6888)
[»] scaffold0080 (1 HSPs)
scaffold0080 (26-85)||(43822-43882)
[»] scaffold0031 (1 HSPs)
scaffold0031 (26-89)||(97218-97282)


Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 4 - 274
Target Start/End: Complemental strand, 18253956 - 18253685
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
18253956 acaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcac 18253857  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
18253856 gaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 18253757  T
204 tatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaag-ttttccccctttgcta 274  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
18253756 tatgatcaattcaaatttgagcttcactttagctcctaattctccaatcttcaagtttttccccctttgcta 18253685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 15862174 - 15862332
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattc 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||||||||||    
15862174 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttaccttaggttatgatcaattc 15862273  T
216 aaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
15862274 aaacttgagcttcaacttaactcctaattctccaatcttcaagttttccccctttgcta 15862332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 266
Target Start/End: Complemental strand, 47481152 - 47480878
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || |||    
47481152 acaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcac 47481053  T
104 gaatttagtaacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccc 191  Q
    |||||||| ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || |||| |||||||| ||||  |||||||||    
47481052 gaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaatatgattatgatgaagactaacccc 47480953  T
192 cttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||||| | ||||| ||| |||||||  ||||||||||| ||||||||||| |||||||||||||| ||||    
47480952 cttaccttagataatgattaatccaaacttaggcttcactttacctcctaattcttcaatcttcaagtttccccc 47480878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 16479071 - 16478879
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||  ||||  || |||    
16479071 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcac 16478972  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||| ||  |  ||||||||||||| ||||||||||||||||||||||||||||||| |   | |||||||| || || |||||||||||||||||    
16478971 gaatctaacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---aaatgattatgataatcactaacccccttacctt 16478879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 2437602 - 2437794
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| |||    || |||||    
2437602 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacga 2437701  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| || |||||||||| |  ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||    
2437702 atttagcaagaattgttcattatcccattttcatacaacatgagaaaatgc-aaaattgtacatgattatgataataactaacccccttacctt 2437794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 13572821 - 13573014
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| ||| ||||   || |||||    
13572821 aacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacga 13572920  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||   |  ||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||| | || ||||||||||||||||||||||    
13572921 atttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccccttaccttag 13573014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 16211908 - 16212145
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
16211908 acaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 16212007  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||||| ||| || | |  ||||||||||||  |||| | || ||| |||  |||||||| || |  ||||||||||||||||||| |    
16212008 gaatttagcaacaattgtccat-aagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttagat 16212106  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||| ||||||||||||    
16212107 gaagattaatcccaacttaggcttcaatttagctcctaa 16212145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 15760202 - 15760030
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||  || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| || |||||||||||||    
15760202 aacatgtaatttcacccacaaacatatcataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaa 15760103  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
15760102 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttag 15760030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 18980109 - 18979937
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
18980109 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 18980010  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
18980009 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 18979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 15950879 - 15950709
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
15950879 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 15950780  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
15950779 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 15950709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 10989554 - 10989746
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
10989554 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 10989653  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  | ||||||||||| |||||||||||||||||||||| |||| ||||||  |||||||||| || || |||||||||| ||||||    
10989654 atttagcatgatttgttcatcaacccattttcatacaacatgagaatatgc-aaaattatacatgattatgataatcactaacccccatacctt 10989746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 13911131 - 13910939
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||    || |||||    
13911131 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacga 13911032  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  |||||||||||||  ||||||||||||||||||||| |||| ||||||  |||||||||| || || | |||||||||||||||    
13911031 atttagcatgaattgttcatcaactcattttcatacaacatgagaatatgc-aaaattacacatgattatgataatcaataacccccttacctt 13910939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 13758538 - 13758710
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
13758538 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 13758637  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
13758638 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 13758710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 15927736 - 15927908
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| |||||||| |||||||    
15927736 aacatgtaatttcacccacaagcataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaa 15927835  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
15927836 tccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 15927908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 261
Target Start/End: Complemental strand, 48622757 - 48622521
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcat 125  Q
    ||||||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||||||| |||||  || ||||||||||| | |||||||||||    
48622757 ttgaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcat 48622658  T
126 caatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagc 225  Q
    ||| |||||||| || ||||||||||||||||||||||  |  ||||||| |||| ||| |||||||||||||||| | ||| | |||   |||||  ||    
48622657 caacccattttcgtaaaacatgagaaaatgcaaaaatttgaattgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggc 48622558  T
226 ttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
    ||||||||||||||||||| || ||||||||||||||    
48622557 ttcactttagctcctaattgcttcaatcttcaagttt 48622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 13321183 - 13321408
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttca---- 124  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || ||||||||||| ||||||| | ||        
13321183 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccactta 13321282  T
125 ------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattca 216  Q
          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  ||||||||||||||||||| | ||||| ||| ||    
13321283 ttcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttaccttagataatgattaatcca 13321382  T
217 aacttgagcttcactttagctcctaa 242  Q
    ||| |  |||||||||||||||||||    
13321383 aacctaggcttcactttagctcctaa 13321408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 14250986 - 14250814
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| ||||| |  || ||| |||||||    || ||||||||||  ||||||||||||||||    
14250986 aacatgtaatttcacccaaaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaa 14250887  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
14250886 cccattttcatacaacatgagaaaatgcaaaaaatgaacatgattacgatgataactaacccccttaccttag 14250814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 11580860 - 11580753
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| |||    
11580860 acaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcac 11580761  T
104 gaatttag 111  Q
    ||||||||    
11580760 gaatttag 11580753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 13037135 - 13037020
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
13037135 acaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 13037036  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
13037035 gaatttagcaacaatt 13037020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 36052806 - 36053045
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||  |     
36052806 acaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagtat 36052905  T
104 gaatttagtaacaattgttcatca-atccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttagg 202  Q
     ||||||| ||||||| | ||| | |   |  ||||||||||||  |||| | || ||| |||  |||||||| || |  |||||||||||||||||||     
36052906 aaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaga 36053005  T
203 ttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    | | ||| ||| | |||||  |||||||||||||||||||    
36053006 taaagattaatcccaacttaggcttcactttagctcctaa 36053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 3060108 - 3060223
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||| |||| || ||||||||| |||    
3060108 acaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcac 3060207  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
3060208 gaatttagcaacaatt 3060223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 7822896 - 7823066
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
7822896 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 7822995  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
7822996 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 7823066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 7830207 - 7830377
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
7830207 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 7830306  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
7830307 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 7830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 27101725 - 27101555
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
27101725 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 27101626  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
27101625 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 27109073 - 27108903
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
27109073 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 27108974  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
27108973 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27108903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 27176601 - 27176771
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
27176601 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 27176700  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
27176701 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27176771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 38783817 - 38783647
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
38783817 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 38783718  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
38783717 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 38783647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 11516371 - 11516484
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
11516371 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 11516470  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
11516471 atttagcaacaatt 11516484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 15441683 - 15441570
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
15441683 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 15441584  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
15441583 atttagcaacaatt 15441570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 30262248 - 30262135
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
30262248 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 30262149  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
30262148 atttagcaacaatt 30262135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 7293160 - 7293273
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||| | ||||||| |||||    
7293160 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcacga 7293259  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
7293260 atttagcaacaatt 7293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 25292455 - 25292344
Alignment:
8 cttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaat 107  Q
    |||||| |||||||||| || |||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||| | ||||||| ||| |||    
25292455 cttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggagcacaaat 25292356  T
108 ttagtaacaatt 119  Q
    |||| |||||||    
25292355 ttagcaacaatt 25292344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 371417 - 371511
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||||||    
371417 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaattgcttcaatattcaagttt 371511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 16418752 - 16418903
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattc 215  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||||||| |||| ||| |||||||||||||||| | ||| | |||      
16418752 aattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaacccccttaccttagatgatgtttaatct 16418851  T
216 aaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
     ||||  ||||||||||||||||||||||  | |||||||||||||| ||||    
16418852 taactaaagcttcactttagctcctaattgtttcaatcttcaagtttccccc 16418903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 261
Target Start/End: Complemental strand, 10000371 - 10000225
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattc 215  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||| |||||  ||||||| ||||  || |||||||||||||||| | ||| | |||      
10000371 aattgttcatcaacccatttttatacaacatgagaagatgcaaaatttgaaattgattatgatgaagacaaacccccttaccttagatgatgtttaatct 10000272  T
216 aaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
     |||||  ||||||||||||||||||||| || ||||||||||||||    
10000271 taacttaggcttcactttagctcctaattgcttcaatcttcaagttt 10000225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 296090 - 295966
Alignment:
1 tttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaa 100  Q
    |||| ||||| |||||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||| ||||| ||||||||| ||   || || |||    
296090 tttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaa 295991  T
101 cacgaatttagtaacaattgttcat 125  Q
    ||||||||||| ||||||| |||||    
295990 cacgaatttagcaacaattattcat 295966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 16915012 - 16914948
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || |||||||||||||||| |||||| ||||||||||||    
16915012 ttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcat 16914948  T

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Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 25124450 - 25124524
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    |||||||| ||||  ||||||||||||||||||| | ||||| |||  ||||||  |||||||||||||||||||    
25124450 atgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaa 25124524  T

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Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 28722256 - 28722337
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
28722256 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 28722337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 9611471 - 9611535
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
9611471 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 9611535  T

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Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 9839042 - 9839106
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
9839042 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 9839106  T

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Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 14935506 - 14935586
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||    
14935506 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 14935586  T

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Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 15358943 - 15359023
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||    
15358943 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 15359023  T

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Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 15363099 - 15363179
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||    
15363099 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 15363179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 48356807 - 48356871
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
48356807 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 48356871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 13448928 - 13448867
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt 70  Q
    ||||||||| ||||| | |||||||| ||||||||||||||| || ||||||||| ||||||    
13448928 tatcattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaattt 13448867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 38424365 - 38424446
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-tttatgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || ||||||||||||    
38424365 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaattttatgtattcaaacatatcat 38424446  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 14272000 - 14271920
Alignment:
10 tatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| || ||||||| ||||||||||||||  ||  |||||||| |||||| |||||| |||||||||||    
14272000 tatcattttcacatactttgaacatgcaatttcaccaacaacaattgaattatcaacaatttcatgcattcaaacatatca 14271920  T

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Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 274
Target Start/End: Complemental strand, 15936748 - 15936478
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
15936748 acaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcac 15936649  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
15936648 gaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccataccttaggc 15936549  T
204 tatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
15936548 tacgatcaattcaaacttgagcttcacttttgctcctaattctccaatcttcaagttttccccctttgcta 15936478  T

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Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 274
Target Start/End: Complemental strand, 15938590 - 15938320
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||    
15938590 acaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcac 15938491  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
15938490 gtatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggc 15938391  T
204 tatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
15938390 tatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 15938320  T

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Target: chr3; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 29 - 274
Target Start/End: Complemental strand, 12902178 - 12901933
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| || |||| ||||||||    
12902178 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaa 12902079  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
12902078 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 12901979  T
229 actttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
12901978 actttaactcctaattctccaatcttcaaattttccccctttgcta 12901933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 15614976 - 15615169
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||  |||||  || |||    
15614976 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagagcac 15615075  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
     ||| ||| |  ||||||||||||| ||||||||||||||||||||||||||||||| |   |||||||||| || |  ||||||||||||||||||    
15615076 aaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---acatgattatgataaagactaacccccttacctta 15615169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 55316364 - 55316555
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
55316364 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 55316463  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||| | || |||||||||||| |||||||    
55316464 atttagcatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccctttacctt 55316555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 16821286 - 16821474
Alignment:
8 cttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaat 107  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||   || |||| ||    
16821286 cttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatcacagcaagagcacggat 16821385  T
108 ttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||   |  ||||||||||||| |||||||||||||||||||| |||||||||| |   |||||||| | || ||||||||||||||||||||    
16821386 ttgacataaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacctt 16821474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 51158139 - 51158024
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
51158139 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 51158040  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
51158039 gaatttagcaacaatt 51158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 41270220 - 41270411
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
41270220 aacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 41270319  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| |||||||||||||||||||| | |||||||||||  |||||||| | || ||||||||||||||||||||    
41270320 atttagcatgaattgttcatcaacccattttcatacaacatgagtagatgcaaaaatt--acatgattgtgataataactaacccccttacctt 41270411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 12030268 - 12030031
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
12030268 acaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 12030169  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| || | |   |||||||||||  |||| | || ||| |||  |||||||| || || | ||||||||||||||||| |    
12030168 gaatttagcaacaattatccat-aagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttaccttagat 12030070  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||| ||||||||||||    
12030069 aaagattaatcccaacttaggcttcaatttagctcctaa 12030031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 12264880 - 12264710
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
12264880 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 12264781  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
12264780 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 12264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 13839036 - 13839233
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
13839036 acaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 13839135  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaa-tgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    |||||||| ||||||| ||||| |||| |  ||||||||||||  ||||| | || ||| |||  |||||||| ||||  |||||||||||||||||||    
13839136 gaatttagcaacaattattcat-aatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttaccttag 13839233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 54651625 - 54651838
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||| ||||||||  |||||||||||||||||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||| ||||||||    
54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaa 54651724  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     ||||||||||||||||||||||| |||||||||||||||||||||| ||||  || |||||||||||||||| | ||||| ||  |||||||  |||||    
54651725 cccattttcatacaacatgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttaccttagatgatgattaacccaaacttttgcttc 54651824  T
229 actttagctcctaa 242  Q
    | || |||||||||    
54651825 aattaagctcctaa 54651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 18911161 - 18911333
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| ||||||||||||||||    
18911161 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 18911260  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
18911261 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 18911333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 15859145 - 15859030
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
15859145 acaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 15859046  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
15859045 gaatttagcaacaatt 15859030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 25058907 - 25059077
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
25058907 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 25059006  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||    
25059007 cccattttcatacaacatgagaaaatgcaaaaattgtgcatgattatgataataactaacccccttacctt 25059077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 49232604 - 49232774
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
49232604 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 49232703  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
49232704 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 49232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 16933886 - 16933803
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16933886 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 16933803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 22275377 - 22275547
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||  ||| ||||   || ||||||||||| ||||||||||||||||    
22275377 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaa 22275476  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||    
22275477 cccattttcatacaacatgagaaaatgcaaaatttgtacatgattatgataataactaacccccttacctt 22275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 14842680 - 14842567
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||    
14842680 aacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcacga 14842581  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
14842580 atttagcaacaatt 14842567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 5228481 - 5228652
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |   | ||| ||| ||||   || ||||||||||| |||||| |||||||||    
5228481 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaggaaataacatcacagcaagagcacgaatttagcaacaat-gttcatcaa 5228579  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
5228580 cccattttcataacacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttag 5228652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 2049952 - 2050189
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| | ||||||||| |||    
2049952 acaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcac 2050051  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| || | |  || |||||||||  |||| | || ||| |||  |||||||| || |  ||||||||||||||||||| |    
2050052 gaatttagcaacaattatccat-aagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttagat 2050150  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||| ||||||||||||    
2050151 aaagattaatcccaacttaggcttcaatttagctcctaa 2050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 15468428 - 15468258
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| | ||   || ||||||||||| ||||||||||| ||||    
15468428 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaa 15468329  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||    
15468328 cccattttcatacaacatgagaaaatgcaaaatttgtacatgattatgataataactaacccccttacctt 15468258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 17912601 - 17912489
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||    
17912601 aacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca-agttggagcacga 17912503  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
17912502 atttagcaacaatt 17912489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 18897130 - 18896962
Alignment:
31 catgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaatc 130  Q
    ||||||||| |||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||  |||||||||||||||| |    
18897130 catgtaattccacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacc 18897031  T
131 cattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||||||||||||||||    
18897030 cattttcatacaacatgagaaaatacaaaacttgtacatgattatgataataactaacccccttacctt 18896962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 1467827 - 1467657
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
1467827 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 1467728  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
1467727 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 1467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 12812009 - 12812179
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    ||||||||||| |||| | || ||||| || |||||||||| | ||| |  || ||| ||||||||   || ||||||||||  ||||||||| ||||||    
12812009 aacatgtaattccacccataaacataccataatcatcaattcaagcacaagaaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaa 12812108  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||| ||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
12812109 cccattttcatacaatatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 12812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 2449357 - 2449244
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
2449357 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 2449258  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
2449257 atttagcaacaatt 2449244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 13975840 - 13975728
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||||| || || ||||||||||| |||||||||||||||||| |||| ||||| |||||||| |||||||||| | ||||||| |||||    
13975840 aacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacga 13975742  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
13975741 atttagcaacaatt 13975728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 45860950 - 45861062
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||||| || || ||||||||||| |||||||||||||||||| |||| ||||| |||||||| |||||||||| | ||||||| |||||    
45860950 aacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacga 45861048  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
45861049 atttagcaacaatt 45861062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 14285289 - 14285387
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||| ||||  ||||||||||||||||||| | ||||| ||| ||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaattcttcaatcttcaagtttccccc 14285387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 9303036 - 9302968
Alignment:
205 atgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
9303036 atgatcaattcaaacttgagcttcactttaactcctaattctccaatcttcaag-tttccccctttgcta 9302968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 13955008 - 13954896
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||| ||||||||||| || || ||||||||||| |||||||||||||||||| |||| ||||| |||||||| |||||||||| | ||||||| |||||    
13955008 aactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacga 13954910  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
13954909 atttagcaacaatt 13954896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 16744234 - 16744130
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||||||||| || || ||||||||| ||||||||||||||| |||| ||||||| ||| ||||||||||||||| | ||||||| |||||    
16744234 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggagcacga 16744135  T
106 attta 110  Q
    |||||    
16744134 attta 16744130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 11477112 - 11477029
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||||| ||||| |||||||||||  ||||||||||| ||||||||||| |||||||||||||| ||||    
11477112 actaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccccc 11477029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 11986262 - 11986038
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgt----tca 124  Q
    |||||||||||||| | ||||||||||||||||||| || | ||||| || || ||| ||| |||||| || ||||||||||  ||||||| |    |||    
11986262 aacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattca 11986163  T
125 t--caatccat---tttcatacaacat--gagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaa 217  Q
    |  ||||| |    ||||||||||||   |||||  ||||| |||||||||||||||| ||||  ||||||||||||||||||| | ||||| ||| |||    
11986162 ttccaatcaacccatttcatacaacaaaggagaagttgcaataattgaacatgattatgatgaagactaacccccttaccttagataatgattaatccaa 11986063  T
218 acttgagcttcactttagctcctaa 242  Q
    ||||  |||||| ||||||||||||    
11986062 acttaggcttcaatttagctcctaa 11986038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 19947026 - 19947120
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttt 261  Q
    |||||||| ||||  ||||||||||||||||||||||||||| ||| |||||||  ||||||||||| ||||| ||| || ||||||||||||||    
19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaaatccttcaatcttcaagttt 19947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 266
Target Start/End: Original strand, 44229153 - 44229391
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||| | |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || |||| |||||  | ||||||||||||||    
44229153 aacatgtaatttcatccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaa 44229252  T
129 tccattttcatacaa-catgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagctt 227  Q
     |||||||||||||| |||||| ||||| |||||||  |  ||||||| |||| ||| |||||||||||||||| | ||| | |||   |||||  | ||    
44229253 cccattttcatacaaccatgag-aaatgaaaaaatttgaattgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggttt 44229351  T
228 cactttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
    ||||||| ||||||||| || |||||||||||||| ||||    
44229352 cactttatctcctaattgcttcaatcttcaagtttccccc 44229391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 14080672 - 14080756
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| || ||||| ||| |  || |||||||||||||||| ||||||||||||||||||| | ||||||| |||||||||    
14080672 ttgaacatgcaaattcactaaccacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 19231979 - 19232038
Alignment:
60 atcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaatt 119  Q
    |||||||||| ||| ||| ||||||||||| ||||||||| ||||||||||| |||||||    
19231979 atcatcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaatt 19232038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 34560062 - 34560128
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcatta 91  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||||    
34560062 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatta 34560128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 6228726 - 6228646
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||||||||||||||||||  || ||||||||| |||||| ||| || |||||||||||    
6228726 tatcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatca 6228646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4145914 - 4145835
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||||||||||| ||||||  || ||||||||| ||||| ||| || |||||||||||    
4145914 tatcattttcacatactatgaacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatca 4145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12953127 - 12953210
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaatt 108  Q
    ||||||||| ||||||||||||||  ||  |||||||| |||||| |||||| |||||||||||| | | || |||||||||||    
12953127 ttgaacatgcaatttcaccaacaacaatctaattatcaccaatttcatgcattcaaacatatcatcataattagaacacgaatt 12953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 16261792 - 16261851
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    ||||||||||||||||||| | | ||| ||||| |||||  |||||||||||||||||||    
16261792 actaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaa 16261851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 3576523 - 3576458
Alignment:
25 attgaacatgtaatttcaccaacaatcatacaattatcatcaa-tttatgcatacaaacatatcat 89  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| || |||||| ||||||||||||    
3576523 attgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcat 3576458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 31412434 - 31412353
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
31412434 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 31412353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 51961063 - 51960990
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 241  Q
    |||||||| ||||  ||||||||||||||||||| | ||||| ||| |||||||   |||||||||| ||||||    
51961063 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctccta 51960990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 9590838 - 9590774
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| | ||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
9590838 ttgaacatgaagtttcaccaacaacaattcaattatcaccaatttaatgcattcaaacatatcat 9590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 14814866 - 14814786
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || |||||||||||    
14814866 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatca 14814786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 17191704 - 17191768
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || | ||||||| |||||| |||||| ||||||||||||    
17191704 ttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcat 17191768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 17204844 - 17204908
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || | ||||||| |||||| |||||| ||||||||||||    
17204844 ttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcat 17204908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 47784850 - 47784786
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-tttatgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| || |||||| ||||||||||||    
47784850 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcat 47784786  T

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Target: scaffold0026 (Bit Score: 234; Significance: 1e-129; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 107886 - 108159
Alignment:
1 tttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaa 100  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
107886 tttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggag 107985  T
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
107986 cacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 108085  T
201 ggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
108086 ggctataatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaaaatttccccctttgcta 108159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 201
Target Start/End: Complemental strand, 64635 - 64437
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattta-----tgcatacaaacatatcattacagttggaa 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||     |||||| ||||||| ||| ||||   ||     
64635 aacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataacatcacagcaagag 64536  T
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||||||||   |  ||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||| | || |||||||||||||||||||||    
64535 cacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccccttacctta 64438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 89915 - 89863
Alignment:
59 tatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattta 110  Q
    |||||||||||| ||||||||||||||||||| | ||||||| ||||||||||    
89915 tatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 4e-84; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 29 - 274
Target Start/End: Complemental strand, 23778133 - 23777888
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||| | |||| ||||| || |||||||||| |||||||  || ||| ||| ||||   || ||||||||||| || |||||||||||||    
23778133 aacatgtaatttcatccacaaacataccataatcatcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaa 23778034  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
23778033 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccctttaccttaggttatgatcaattcaaatttgagcttc 23777934  T
229 actttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
23777933 actttagctcctaattctccaatcttctagttttccccctttgcta 23777888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 274
Target Start/End: Complemental strand, 7507963 - 7507683
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |  || ||| ||| |||    || |||||    
7507963 aacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacga 7507864  T
106 atttagtaacaattgttcat----------caatccattttcatacaaca--tgagaaaatgcaaaaattgaacatgattataatgataactaaccccct 193  Q
    |||||| || |||| |||||          ||| |||| |||||||||||  ||||||| ||||| || ||||||||||||| ||||  |||||||||||    
7507863 atttagcaataattattcattcattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaaccccct 7507764  T
194 taccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
7507763 taccttaggttatgatcaattcaaacttgagtttcactttaactcctaattctccaatcttcaagctttccccctttgcta 7507683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 19886768 - 19886576
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
19886768 aacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 19886669  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| || ||||||||||||||||||||    
19886668 atttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataataactaacccccttacctt 19886576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 25265511 - 25265261
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| || |||    
25265511 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcac 25265412  T
104 gaatttagtaacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccc 191  Q
    |||||||| ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  |||||||||    
25265411 gaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccc 25265312  T
192 cttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    ||||| |||| | ||||| ||| ||||| |  |||||||||||||||||||    
25265311 cttacattagataatgattaatccaaacctaggcttcactttagctcctaa 25265261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 462880 - 463117
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| |||    
462880 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcac 462979  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| || | |  ||||||||||||  ||||||  | ||| |||  |||||||| || |  ||||||||||||||||||| |    
462980 gaatttagcaacaattatccat-aagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttagat 463078  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||| ||||||||||||    
463079 aaagattaatcccaacttaggcttcaatttagctcctaa 463117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 12728560 - 12728732
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
12728560 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 12728659  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
12728660 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 12728732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 34824643 - 34824815
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
34824643 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 34824742  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||||||||    
34824743 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataatcactaacccccttaccttag 34824815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 42178057 - 42177885
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| ||||| |  || ||| |||||||    || ||||||||||| ||||||||||||||||    
42178057 aacatgtaatttcacccaaaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaa 42177958  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
42177957 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 42177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 12641730 - 12641517
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||| | |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
12641730 aacatgtaatttcagccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 12641631  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| | | ||| ||  ||||||   |||||    
12641630 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagatgaagattaacccaaactcttgcttc 12641531  T
229 actttagctcctaa 242  Q
    | ||||||||||||    
12641530 aatttagctcctaa 12641517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 3798691 - 3798519
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
3798691 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 3798592  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||    
3798591 cccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttaccttag 3798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 8944014 - 8944186
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| ||||  |||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| ||||||||||||||||    
8944014 aacatgtaatttcacccacaaatataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 8944113  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
8944114 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 8944186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 36982562 - 36982447
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| |||    
36982562 acaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcac 36982463  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
36982462 gaatttagcaacaatt 36982447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 12635956 - 12635784
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| ||||||||||||||||    
12635956 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 12635857  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     | |||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||    
12635856 cctattttcatacaacatgaggaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 12635784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 16935761 - 16935933
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||  |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || || |||||||  ||||||||||||||||    
16935761 aacatgtaatttcacgcacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaa 16935860  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
16935861 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 16935933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 17006421 - 17006593
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||  |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || || |||||||  ||||||||||||||||    
17006421 aacatgtaatttcacgcacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaa 17006520  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
17006521 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 17006593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 20627434 - 20627319
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||    
20627434 acaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcac 20627335  T
104 gaatttagtaacaatt 119  Q
    |||||||  |||||||    
20627334 gaatttaacaacaatt 20627319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 24341510 - 24341395
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||     
24341510 acaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcat 24341411  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
24341410 gaatttagcaacaatt 24341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 8891384 - 8891499
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| |||    
8891384 acaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcac 8891483  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
8891484 gaatttagcaacaatt 8891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 19794825 - 19794719
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||    
19794825 acaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcac 19794726  T
104 gaattta 110  Q
    |||||||    
19794725 gaattta 19794719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 43643078 - 43642963
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||| ||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||    
43643078 acaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcac 43642979  T
104 gaatttagtaacaatt 119  Q
     ||||||| |||||||    
43642978 aaatttagcaacaatt 43642963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 11231426 - 11231256
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
11231426 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 11231327  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
11231326 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 11231256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 22513273 - 22513103
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
22513273 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 22513174  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
22513173 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 22513103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 24685869 - 24685699
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
24685869 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 24685770  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
24685769 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 24685699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 28775895 - 28775725
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
28775895 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 28775796  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
28775795 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 28775725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 19689520 - 19689407
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
19689520 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 19689421  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
19689420 atttagcaacaatt 19689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 23820215 - 23820328
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
23820215 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 23820314  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
23820315 atttagcaacaatt 23820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 14906559 - 14906446
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
14906559 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 14906460  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
14906459 atttagcaacaatt 14906446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 17396771 - 17396659
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||| | ||||||| |||||    
17396771 aacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacga 17396673  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
17396672 atttagcaacaatt 17396659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 5888631 - 5888480
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattc 215  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||||||| |||| ||| |||||||||||||||| | ||| | |||      
5888631 aattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaacccccttaccttagatgatgtttaatct 5888532  T
216 aaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
     ||||| |||||||||||||||||||||| |  |||||||||||||| ||||    
5888531 taacttaagcttcactttagctcctaattgcgtcaatcttcaagtttccccc 5888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 28031167 - 28031068
Alignment:
167 catgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||| ||||  ||||||||||||||||||||| ||||| |||||||||||  ||||||||||| ||||||||||| |||||||||||||| ||||    
28031167 catgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccccc 28031068  T

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Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 20015155 - 20015268
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| ||||||||||| |||||||| ||||||| |||||| |||||||||||| | ||||||| |||||    
20015155 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggagcacga 20015254  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
20015255 atttagcaacaatt 20015268  T

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Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 23774391 - 23774476
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||| ||||||| || ||||||||||||||||||||||    
23774391 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaacttgattatgataataactaacccccttaccttag 23774476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 33128372 - 33128446
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    |||||||| ||||  ||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||    
33128372 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaa 33128446  T

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Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 266
Target Start/End: Original strand, 21142135 - 21142301
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaac-atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  | |||||||||||||| ||||||||||||||| |||||||| || |||  ||  |  ||||||| |||| ||| ||||||||||||||    
21142135 cacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa-tgaaaatttttgaattgattatgatgaaaacaaacccccttacctt 21142233  T
200 aggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
    || | ||| | |||   |||||  ||||||||||||||||||||| || |||||||||||||| ||||    
21142234 agatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttccccc 21142301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 17204659 - 17204753
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttt 261  Q
    |||||||| ||||  |||||||||||||| |||||||||||| ||| |||||||   |||||||||| ||||||| |||| ||||||||||||||    
17204659 atgattatgatgaagactaacccccttactttaggttatgattaatccaaacttagacttcactttaactcctaatttcttcaatcttcaagttt 17204753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 19669191 - 19669130
Alignment:
28 gaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||| ||||||||||||||  |  |||||||||||||||| ||||||||||||||||||    
19669191 gaacatgcaatttcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatca 19669130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 19660044 - 19660107
Alignment:
27 tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    |||||||| ||||||||||||||| || ||||||||| |||||| ||| |||| ||||||||||    
19660044 tgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtatacgaacatatcat 19660107  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 9636891 - 9636972
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
9636891 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 9636972  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 19666691 - 19666775
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| || |||||||| ||  || ||||||||| |||||| |||||| |||||||||||||| |||| || || ||||||    
19666691 ttgaacatgcaaattcaccaaaaacaattcaattatcaccaatttcatgcattcaaacatatcattatagttagagcatgaattt 19666775  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 24884849 - 24884913
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-tatgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||  |||||| ||||||||||||    
24884849 ttgaacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatatcat 24884913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 29 - 274
Target Start/End: Original strand, 19020654 - 19020899
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| || |||||||||||||    
19020654 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaa 19020753  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
19020754 cccattttcatacaacatgacaaaatgcaaaaattgaacatgattatgatggtaactaacccccttaccttaggttatgatcaattcaaacttgagcttc 19020853  T
229 actttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    || |||||||||||||||||||||||||||||| |||| |||||||    
19020854 accttagctcctaattctccaatcttcaagtttcccccttttgcta 19020899  T

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Target: chr4; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 134 - 274
Target Start/End: Original strand, 9795499 - 9795639
Alignment:
134 tttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcacttt 233  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
9795499 tttcatacaacatgagaaaatgaaaaaattgaacatgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcacttt 9795598  T
234 agctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    |||||||||||||||||||||||||||||||||||||||||    
9795599 agctcctaattctccaatcttcaagttttccccctttgcta 9795639  T

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Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 10644364 - 10644554
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||   || |||||    
10644364 aacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacga 10644463  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||   |  ||||||||||||| |||||||||||||||||||| |||||||||| |   |||||||| | || ||||||||||||||||||||    
10644464 atttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacctt 10644554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 15675210 - 15675095
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
15675210 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 15675111  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
15675110 gaatttagcaacaatt 15675095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 168 - 274
Target Start/End: Original strand, 16523146 - 16523252
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccc 267  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
16523146 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcataattctccaatcttcaagttttccccc 16523245  T
268 tttgcta 274  Q
    |||||||    
16523246 tttgcta 16523252  T

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Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 18169138 - 18169308
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
18169138 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 18169237  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
18169238 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 18169308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 47357799 - 47357991
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||  ||||||||||||||| ||| ||||   || |||||    
47357799 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcacga 47357898  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    |||||| |  ||||||||||||| |||||||||||||||||||| |||||||||| |   |||||||| | || ||||||||||||||||||||||    
47357899 atttagcatgaattgttcatcaacccattttcatacaacatgaggaaatgcaaaatt---acatgattgtgataataactaacccccttaccttag 47357991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 122031 - 122146
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
122031 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 122130  T
104 gaatttagtaacaatt 119  Q
     ||||||| |||||||    
122131 aaatttagcaacaatt 122146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 10104371 - 10104256
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
10104371 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 10104272  T
104 gaatttagtaacaatt 119  Q
    | |||||| |||||||    
10104271 ggatttagcaacaatt 10104256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 266
Target Start/End: Original strand, 18248386 - 18248624
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||| | |||| ||||| || ||| |||||| ||||| |  || ||| ||| ||||   || ||||||||||  | ||||||||||||||    
18248386 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 18248485  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     |||||||||||||||||||||||||| |||||||| ||| |||||| || |||||||||||||||||||||| | ||||| |||   ||||| ||||||    
18248486 cccattttcatacaacatgagaaaatgtaaaaattgtacaagattatgataataactaacccccttaccttagatgatgattaatcttaacttaagcttc 18248585  T
229 actttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
    |||||| ||||||||| || |||||||||||||| ||||    
18248586 actttaactcctaattgcttcaatcttcaagtttccccc 18248624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 7132153 - 7131981
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| ||||||||||||||||    
7132153 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 7132054  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
7132053 cccattttcatataacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 7131981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 17145745 - 17145573
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||| | |  || ||| ||| |||||  || ||||||||||  | ||||||||||||||    
17145745 aacatgtaatttcacccacaaacataccataatcatcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaa 17145646  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
      ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
17145645 ctcattttcatacaacatgagaaaatgcaaaaattgaacatgattatgataataactaacccccttaccttag 17145573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 20000891 - 20001063
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
20000891 aacatgtaatttcacccagaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 20000990  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
20000991 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 20001063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 266
Target Start/End: Original strand, 22738437 - 22738675
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   |||||||||||||  | ||||||||| |||     
22738437 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcag 22738536  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     |||||||||||||||||||||||||||||||||||||  ||||||| ||||  || |||||||||||||||| | ||| | |||   |||||  |||||    
22738537 cccattttcatacaacatgagaaaatgcaaaaattgaaattgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttc 22738636  T
229 actttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
    |||||||||||||||| || |||||||||||||| ||||    
22738637 actttagctcctaattgcttcaatcttcaagtttccccc 22738675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 54118365 - 54118250
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||| || | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||    
54118365 acaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcac 54118266  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
54118265 gaatttagcaacaatt 54118250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 31115771 - 31115865
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttgg 98  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
31115771 acaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 26680344 - 26680457
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||||||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
26680344 aacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 26680443  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
26680444 atttagcaacaatt 26680457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 15287333 - 15287161
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || | |||| ||| ||||| |  || ||| ||| ||||   || |||||||||||  | ||||||||||||     
15287333 aacatgtaatttcacccacaaacataccataaccatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcat 15287234  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
15287233 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 15287161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 15294442 - 15294270
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || | |||| ||| ||||| |  || ||| ||| ||||   || |||||||||||  | ||||||||||||     
15294442 aacatgtaatttcacccacaaacataccataaccatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcat 15294343  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
15294342 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 15294270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 13246572 - 13246687
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| | |||    
13246572 acaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcac 13246671  T
104 gaatttagtaacaatt 119  Q
    |||||||  |||||||    
13246672 gaatttaacaacaatt 13246687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 13048340 - 13048227
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||| |||||||||| || |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||  ||||||| || ||    
13048340 aacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggagcatga 13048241  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
13048240 atttagcaacaatt 13048227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 8378391 - 8378480
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaaccc 190  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| || |||||||||||    
8378391 cacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaattgtacatgattatgataataactaaccc 8378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 10488706 - 10488819
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
10488706 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 10488805  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
10488806 atttagcaacaatt 10488819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 16328045 - 16327932
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
16328045 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 16327946  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
16327945 atttagcaacaatt 16327932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 8045272 - 8045365
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    |||||||| ||||  ||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||| ||||||||||||||    
8045272 atgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcactttagctcctaattcttcaatcttcaagttt 8045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 19697295 - 19697217
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||||||||| |||||| ||||  ||||||||||| ||||||||||| ||||||||||||||    
19697295 actaacccccttaccttaggttatgattaattcacacttaggcttcactttacctcctaattcttcaatcttcaagttt 19697217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 19707880 - 19707802
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||||||||| |||||| ||||  ||||||||||| ||||||||||| ||||||||||||||    
19707880 actaacccccttaccttaggttatgattaattcacacttaggcttcactttacctcctaattcttcaatcttcaagttt 19707802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 22352065 - 22351980
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
22352065 aattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 22351980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 32460620 - 32460537
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||| | ||||| ||| |||||||  ||||||||||||||||||||||| |||||||||||||| ||||    
32460620 actaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 32460537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 14500128 - 14500046
Alignment:
184 ctaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||||||||||||| | ||||| ||| ||||||| |||||||||||||||| ||||||| |||||||||||||| ||||    
14500128 ctaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcataattcttcaatcttcaagtttccccc 14500046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 26339274 - 26339359
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
26339274 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 26339359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 33240890 - 33240957
Alignment:
52 atacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaatt 119  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||    
33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt 33240957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 40885653 - 40885570
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaattt 109  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||| ||  |||||||||  ||||||||    
40885653 ttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 8378482 - 8378592
Alignment:
157 aaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttc 255  Q
    |||||||| |||||||||| || |||||||| ||||||||||||| | ||| | |||   ||||| |||||||||||| ||||||||| || ||||||||    
8378482 aaaaattgtacatgattatgataataactaatccccttaccttagatgatgtttaatcttaacttaagcttcactttaactcctaattgcttcaatcttc 8378581  T
256 aagttttcccc 266  Q
    |||||| ||||    
8378582 aagtttccccc 8378592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 40885492 - 40885418
Alignment:
167 catgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 241  Q
    ||||||||| ||||   |||||||||||||||||| | ||||| ||| |||||||  ||||||||||||||||||    
40885492 catgattatgatgaattctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 7964802 - 7964732
Alignment:
20 acataattgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||| ||||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
7964802 acatacttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 7964732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 15675041 - 15674967
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    |||||||| ||||  ||||||||||||||||||| ||||||| ||    |||||  |||||||||||||||||||    
15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 15674967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 38764873 - 38764934
Alignment:
27 tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatc 87  Q
    |||||||||||||||||||||||  || ||||||||| |||||| || ||| ||||||||||    
38764873 tgaacatgtaatttcaccaacaacaattcaattatcaccaatttcattcattcaaacatatc 38764934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 55376525 - 55376452
Alignment:
169 tgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    ||||||| ||||  ||||||||||||||||||| | | ||||||  |||||||  |||||| ||||||||||||    
55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaa 55376452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 15013365 - 15013282
Alignment:
27 tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattta 110  Q
    |||||||| ||||||||||||||  || |||||||||||||||| |||||| | |||||||||| | | || || ||||||||||    
15013365 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattc-aacatatcatcataattagagcacgaattta 15013282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 18276597 - 18276661
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  ||  |||||||| |||||| |||||| ||||||||||||    
18276597 ttgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcat 18276661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 40905034 - 40904954
Alignment:
11 atcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    |||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
40905034 atcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcagcaatttcatgtattcaaacatatcat 40904954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 47535149 - 47535085
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    |||||| || ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
47535149 ttgaacttgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 47535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 34571 - 34312
Alignment:
14 atttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagta 113  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || ||||||||||| |    
34571 atttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 34472  T
114 acaattgttcat----------caatccattttcatacaaca--tgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    | |||| | |||          ||| |||| |||||||||||  ||||||| ||||| || ||||||||||||| || ||||||||||| ||||||||||    
34471 ataattatccattcattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgataataactaaccctcttaccttag 34372  T
202 gttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
34371 gtaatgatcaattcaagcttgagcttcactttagctcctaattctccaatcttcaagttt 34312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 134 - 266
Target Start/End: Complemental strand, 13333 - 13201
Alignment:
134 tttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcacttt 233  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
13333 tttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcacttt 13234  T
234 agctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||||||||||||||||||||||||||||    
13233 agctcctaattctccaatcttcaagttttcccc 13201  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 104707 - 104643
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    |||||| || || |||||||||||  || |||||||||||||||| |||||||||||||||||||    
104707 ttgaacctgcaaattcaccaacaacaattcaattatcatcaatttaatgcatacaaacatatcat 104643  T

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Target: scaffold0125 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 266
Target Start/End: Original strand, 41790 - 42063
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || |||    
41790 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcac 41889  T
104 gaatttagtaacaattgttca----------tcaatccattttcatacaac-atgagaaaatgcaaaaattgaacatgattataatgataactaaccccc 192  Q
    |||||||  ||||||| | ||          |||| |||| |||||||||| |||||||| || || || ||||||||||||| ||||  ||||||||||    
41890 gaatttaacaacaattatccatttattcaattcaacccatattcatacaacaatgagaaattgaaataaatgaacatgattatgatgaagactaaccccc 41989  T
193 ttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||| |||||||||||||| ||||    
41990 ttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 42063  T

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Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 29 - 266
Target Start/End: Complemental strand, 13620882 - 13620644
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||| ||||||||| |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || ||||||||||| ||||||||||||||||    
13620882 aacatgcaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaa 13620783  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| | ||  ||||||||||||||||||||||||||||||||||||||   |||||    
13620782 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgaagaagactaacccccttaccttaggttatgatcaattcaaactcaggcttc 13620683  T
229 actttagctcctaa-ttctccaatcttcaagttttcccc 266  Q
    |||||||||||||| |||| |||||||||||||||||||    
13620682 actttagctcctaatttcttcaatcttcaagttttcccc 13620644  T

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Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 1650214 - 1650021
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| |||||  || |||    
1650214 acaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcac 1650115  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||| ||| |  ||||||||||||| ||||||||||||||||||||||||||||||| |   |||||||||| || |  ||||||||||||||||||    
1650114 gaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---acatgattatgataaagactaacccccttacctta 1650021  T

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Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 1556173 - 1556345
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
1556173 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 1556272  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
1556273 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttag 1556345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 35009551 - 35009314
Alignment:
13 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| |||||| || |||||||||||     
35009551 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagc 35009452  T
113 aacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  |||||||||||||| |||    
35009451 aacaattatccatttcttcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttacttta 35009352  T
201 ggttatgatcaattcaaacttgagcttcactttagctc 238  Q
    | | ||||| ||| |||||||  |||||||||||||||    
35009351 gataatgattaatccaaactttggcttcactttagctc 35009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 16232060 - 16232232
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
16232060 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 16232159  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
16232160 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 16232232  T

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Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 23153589 - 23153828
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
23153589 acaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 23153688  T
104 gaatttagtaacaattgttcatcaatc-cattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttagg 202  Q
    |||||||| ||||||| | ||| |  |  |  ||||||||||||  ||||||  | ||| |||  |||||||| ||||  ||||||||||||||||||||    
23153689 gaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttaccttagg 23153788  T
203 ttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    | | ||| ||| | |||||  |||||| ||||||||||||    
23153789 taaagattaatcccaacttaggcttcaatttagctcctaa 23153828  T

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Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 27654090 - 27653898
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||| |||||||||| |||| ||| ||||   || |||||    
27654090 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcacga 27653991  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  | ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| || || ||||||||||| |||||    
27653990 atttagcatgatttgttcatcaatccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataatcactaaccccctcacctt 27653898  T

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Target: chr6; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 18086911 - 18086739
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| ||||||||||||||||    
18086911 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 18086812  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
18086811 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatactaataactaacccccttaccttag 18086739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 15862622 - 15862822
Alignment:
13 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagt 112  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || ||||||||||||    
15862622 catttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagt 15862721  T
113 aacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  ||||||||||||||||||    
15862722 aacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttacctta 15862821  T
201 g 201  Q
    |    
15862822 g 15862822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 25175708 - 25175901
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||  ||||   || |||||    
25175708 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcacga 25175807  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgag-aaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  |||||||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||  | || |||||||||||||||||    
25175808 atttagcatgaattgttcatcaatccattttcatacaacatgagaaaaatgc-aaaattatacatgattatggtaatcactaacccccttacctt 25175901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 23977937 - 23978109
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
23977937 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 23978036  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||||    
23978037 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacgcccttaccttag 23978109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 1657860 - 1657660
Alignment:
13 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |||||| || |||||||||||     
1657860 catttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcacgaatttagc 1657761  T
113 aacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  ||||||||||||||||||    
1657760 aacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttacctta 1657661  T
201 g 201  Q
    |    
1657660 g 1657660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 29666041 - 29666255
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||  || ||| ||| |||| | || ||||||||||  ||||||| | |||||     
29666041 aacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcac 29666140  T
129 tccattttcatacaac-atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagctt 227  Q
     ||||||||||||||| |||||||| ||||| |||||||||||||||| ||||  |||||||| ||||  |||| | ||||| ||| |||||||  ||||    
29666141 cccattttcatacaacaatgagaaattgcaataattgaacatgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggctt 29666240  T
228 cactttagctcctaa 242  Q
    || ||||||||||||    
29666241 caatttagctcctaa 29666255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 16825861 - 16825705
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatca--tacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |  ||||| || |||||||| ||||||||||||||| ||| ||||   || |||    
16825861 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 16825762  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaa 160  Q
    |||||||| |  ||||||||||||| |||||||||||||||||||||||||||||||    
16825761 gaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa 16825705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 19610186 - 19610358
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || | |||| ||| ||||| |  || ||| ||| ||||   || ||||||||||| || |||||||||||||    
19610186 aacatgtaatttcacccacaaacataccataaccatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaa 19610285  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
19610286 cccattttcatacaacatcagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 19610358  T

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Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 16556227 - 16556057
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||  ||| ||||||||||  |||||||||||| |||    
16556227 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaa 16556128  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
16556127 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 16632783 - 16632613
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||  ||| ||||||||||  |||||||||||| |||    
16632783 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaa 16632684  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
16632683 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 18823315 - 18823209
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccc 267  Q
    |||||||| ||||  ||||||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||||| ||||||||||||    
18823315 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcactttagctcctaattctccaatctttaagttttccccc 18823216  T
268 tttgcta 274  Q
    |||||||    
18823215 tttgcta 18823209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 18839170 - 18839064
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccc 267  Q
    |||||||| ||||  ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
18839170 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcactttagcttctaattctccaatctttaagttttccccc 18839071  T
268 tttgcta 274  Q
    |||||||    
18839070 tttgcta 18839064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 22225826 - 22225656
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||  ||||||||||||||||    
22225826 aacatgtaatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaa 22225727  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||| ||||||    
22225726 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccatacctt 22225656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 14626237 - 14626132
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||   || |||||    
14626237 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacga 14626138  T
106 atttag 111  Q
    ||||||    
14626137 atttag 14626132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 10488867 - 10489037
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
10488867 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 10488966  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
10488967 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 10489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 16376461 - 16376291
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
16376461 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 16376362  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
16376361 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 16383785 - 16383615
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
16383785 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 16383686  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
16383685 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 22251648 - 22251484
Alignment:
35 taatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaatccatt 134  Q
    |||||||||| | || ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||  |||||||||||||||| |||||    
22251648 taatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccatt 22251549  T
135 ttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||| ||||||    
22251548 ttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccatacctt 22251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 19299477 - 19299575
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
19299477 cacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 19299575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 19629663 - 19629740
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
19629663 actaacccccttaccttaggttatgatcaattcaaatttgagcttcac-ttagctcctaattctccaatcttcaagttt 19629740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 16299903 - 16299825
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||| ||||||||||||||    
16299903 actaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagttt 16299825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 27751603 - 27751816
Alignment:
40 tcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttca----------tcaat 129  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| || || |||||||||||  ||| || | ||          ||||     
27751603 tcaccaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccatttattcaattcaac 27751702  T
130 ccattttcataca-acatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
    |||| |||||||| | |||||||| ||||| || ||||||||||||| ||||  ||||||||||||||||||| | | ||| ||| |||||||  |||||    
27751703 ccatattcatacacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttc 27751802  T
229 actttagctcctaa 242  Q
    | ||||||||||||    
27751803 aatttagctcctaa 27751816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 32276691 - 32276601
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaag 258  Q
    |||||||| ||||  ||||||||||||||||||| | ||||| ||| ||||||| |||||||||||||||||||||||| |||||||||||    
32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaattcttcaatcttcaag 32276601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 29869777 - 29869692
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| || ||  ||||||| || ||||||||||||||||||||||    
29869777 aattgttcatcaacccattttcatacaacatgagaagatgtaaaattttaaattgattatgataataactaacccccttaccttag 29869692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 15742137 - 15742058
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||| ||| || ||||||||||||||    
15742137 actaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaaatccttcaatcttcaagttt 15742058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 18002412 - 18002333
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||||||||| |||  ||||||   |||||||||||||||| ||| || ||||||||||||||    
18002412 actaacccccttaccttaggttatgattaatctaaacttagccttcactttagctcctaaatccttcaatcttcaagttt 18002333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 18629692 - 18629628
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || |||||||||||||||| |||||| ||||||||||||    
18629692 ttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcat 18629628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 26090074 - 26090133
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    ||||||||||||||||||||| ||| |||||  ||||||  |||||||||||||||||||    
26090074 actaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctcctaa 26090133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 29605614 - 29605675
Alignment:
27 tgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatca 88  Q
    |||||||||||||||||||||||  || |||||||||  |||| |||||| |||||||||||    
29605614 tgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatca 29605675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 16887876 - 16887792
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| || |||||||||||   | |||||||||||||||| |||||||||||||||| || | |||| || |||||||||    
16887876 ttgaacatgcaaattcaccaacaacagttcaattatcatcaatttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 17083298 - 17083218
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||  ||||||||||||||  || ||||||||| ||||| |||||| ||||||||||||    
17083298 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcat 17083218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 23148270 - 23148377
Alignment:
135 ttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcacttta 234  Q
    ||||||||||||  ||||||  | ||| |||  |||||||| ||||  ||||||||||||||||||||| | ||| ||| | |||||  |||||| ||||    
23148270 ttcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaattta 23148369  T
235 gctcctaa 242  Q
    ||||||||    
23148370 gctcctaa 23148377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 17557101 - 17557017
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattta 110  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||| | | || || ||||||||||    
17557101 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcat-caaacatatcatcataattagagcacgaattta 17557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 25651400 - 25651461
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatat 86  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||    
25651400 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 25651461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 35136096 - 35136033
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| || ||||| |||||  || |||||||||||||||| |||||||||||||||||||    
35136096 ttgaacatgcaaattcac-aacaacaattcaattatcatcaatttcatgcatacaaacatatcat 35136033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 24549124 - 24549318
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||  || |||    
24549124 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcac 24549223  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    |||| ||| |  ||||||||||||| ||||||||||||||||||||||||||||||| |   |||||||||| || || |||||||||||||||||||    
24549224 gaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---acatgattatgataatcactaacccccttaccttag 24549318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 6774367 - 6774175
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||  || |||    
6774367 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcac 6774268  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||| ||| |  ||||||||||||| ||||||||||| ||||||||||||||||||| |   |||||||||| || || |||||||||||||||||    
6774267 gaatctagcatgaattgttcatcaacccattttcatataacatgagaaaatgcaaaatt---acatgattatgataatcactaacccccttacctt 6774175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 197
Target Start/End: Complemental strand, 21844679 - 21844490
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||   || |||||    
21844679 aacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacga 21844580  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacc 197  Q
    ||||   |  ||||||||||||| ||| |||||||||||||||| |||||||||||||  |||||||| | || ||||||||||||||||||    
21844579 atttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccccttacc 21844490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 21852072 - 21851881
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||   || |||||    
21852072 aacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacga 21851973  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||   |  ||||||||||||| ||| |||||||||||||||| |||||||||||||  |||||||| | || ||||||||||||||||||||    
21851972 atttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccccttacctt 21851881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 201
Target Start/End: Complemental strand, 16674499 - 16674306
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || ||| |||| ||||||| ||||||| ||| ||||   || |||||    
16674499 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcacga 16674400  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    |||||| |  ||||||||| ||| |||||||||||||||||||| |||||||||||||  |||||||| | || ||||||||||||||||||||||    
16674399 atttagcatgaattgttcaacaacccattttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccccttaccttag 16674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 22006346 - 22006176
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
22006346 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 22006247  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
22006246 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 16873139 - 16872926
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
16873139 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 16873040  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||   | ||| || |||||||   |||||    
16873039 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaactcaaactcttgcttc 16872940  T
229 actttagctcctaa 242  Q
    | ||||||||||||    
16872939 aatttagctcctaa 16872926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 30120867 - 30121060
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||| ||| ||||   || |||||    
30120867 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcacga 30120966  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  |||||||||||||  ||||||||||||||||||||  || ||||||||  |||||||||| || || |||||||||||||||||    
30120967 atttagcatgaattgttcatcaactcattttcatacaacatgagattatacaaaaattacacatgattatgataatcactaacccccttacctt 30121060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 13721016 - 13720844
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| |||    || ||||||||||| ||||||||||||||||    
13721016 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 13720917  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
13720916 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 13720844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 16195399 - 16195571
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  |||||| ||| ||||   ||  |||||||||| ||||||||||||||||    
16195399 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatcaa 16195498  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||    
16195499 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataattaacccccttaccttag 16195571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 16193837 - 16193723
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| |||    
16193837 acaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcac 16193738  T
104 gaatttagtaacaat 118  Q
    |||||||| ||||||    
16193737 gaatttagcaacaat 16193723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 16038819 - 16038713
Alignment:
167 catgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
16038819 catgattatgatgaagacaaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaag-tttcccc 16038721  T
267 ctttgcta 274  Q
    ||||||||    
16038720 ctttgcta 16038713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 43373589 - 43373482
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||| |||    
43373589 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcac 43373490  T
104 gaatttag 111  Q
    ||||||||    
43373489 gaatttag 43373482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 13662353 - 13662181
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||  ||| ||||| |  || ||| ||| ||||   || ||||||||||| |||||||||| |||||    
13662353 aacatgtaatttcacccacaaacataccataatcatncattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgtttatcaa 13662254  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
13662253 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 13662181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 2545264 - 2545371
Alignment:
167 catgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||| ||||  ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||||||||||    
2545264 catgattatgatgaagactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagttttcccc 2545363  T
267 ctttgcta 274  Q
    ||||||||    
2545364 ctttgcta 2545371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 24928912 - 24928797
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| |||    
24928912 acaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagttggagcac 24928813  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
24928812 gaatttagcaacaatt 24928797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 16405096 - 16404989
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||| ||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
16405096 acaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 16404997  T
104 gaatttag 111  Q
    ||||||||    
16404996 gaatttag 16404989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 17345720 - 17345917
Alignment:
13 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||| || ||||||||| |     
17345720 catttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagagcacgaatttcgc 17345819  T
113 aacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacct 198  Q
    ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  ||||||||||||||||    
17345820 aacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttacct 17345917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 271448 - 271278
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
271448 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 271349  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
271348 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 644472 - 644642
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
644472 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 644571  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
644572 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 830207 - 830377
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
830207 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 830306  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
830307 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 22088882 - 22088712
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
22088882 aacatgtaatttcacctataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 22088783  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
      ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
22088782 cacattttcatacaacatgagaaaatgcaaagattgtacatgattatgatgataactaacccccttacctt 22088712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 5238231 - 5238344
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
5238231 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 5238330  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
5238331 atttagcaacaatt 5238344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 22907333 - 22907220
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
22907333 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 22907234  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
22907233 atttagcaacaatt 22907220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 24661367 - 24661254
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
24661367 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 24661268  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
24661267 atttagcaacaatt 24661254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 43685690 - 43685803
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
43685690 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 43685789  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
43685790 atttagcaacaatt 43685803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 15319175 - 15319077
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
15319175 cacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 15319077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 15499544 - 15499446
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
15499544 cacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 15499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 22147771 - 22147849
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
22147771 actaaaccccttaccttaggttatgatcaattcaaacttgagcttcaccttagctcctaattcttcaatcttcaagttt 22147849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 18612739 - 18612815
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagt 259  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
18612739 actaacccccttaccttaggttatgatcaattcaaatttgggcttcactttagctcctaattcttcaatcttcaagt 18612815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 3431208 - 3431114
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||    
3431208 atgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcactttagctcctaattgcttcaatcttcaagttt 3431114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 22886669 - 22886753
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||| |||| |||||||||||||| ||||    
22886669 actaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaatttcttcaatcttcaagtttccccc 22886753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 21494373 - 21494290
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||| | ||||| ||| |||||||  ||||||||||||||||||||||| |||||||||||||| ||||    
21494373 actaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttacccc 21494290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 26011657 - 26011721
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||||||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
26011657 ttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 26011721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 222798 - 222754
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaat 50  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
222798 aacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 691953 - 691909
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaat 50  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
691953 aacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 736421 - 736377
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaat 50  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
736421 aacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 860316 - 860272
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaat 50  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
860316 aacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 15933461 - 15933525
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
15933461 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 15933525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 33172374 - 33172455
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
33172374 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 33172455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 22742910 - 22742990
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| |||||  |||||||||||    
22742910 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcactcaaacatatca 22742990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 23151917 - 23151833
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| ||||||||||||||  || |||||||||  | ||| |||||| |||| ||||||| | | |||||||||||||||    
23151917 ttgaacatgaaatttcaccaacaacaattcaattatcactagtttcatgcattcaaatatatcatcataattggaacacgaattt 23151833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 23226156 - 23226096
Alignment:
30 acatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||| || |||||||||||  |  |||||||||||||||| |||||||||||||||||||    
23226156 acatgcaaattcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatcat 23226096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 25296321 - 25296385
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| |||||||||||||   || |||||||||| ||||| |||||| ||||||||||||    
25296321 ttgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcattcaaacatatcat 25296385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 25758341 - 25758405
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| |||||||||||||   || |||||||||| ||||| |||||| ||||||||||||    
25758341 ttgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcattcaaacatatcat 25758405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 3105 - 3301
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||   || |||    
3105 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcac 3204  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||| || |||| |||||||||||||||||    
3205 gaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattgtacataattatgataataattaacccccttaccttag 3301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 29188393 - 29188201
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||  || |||    
29188393 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcac 29188294  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||| ||| |  ||||||||||| | ||||||||||||||||||||||||||||||| |   ||||||||||||| || |||||||||||||||||    
29188293 gaatctagcatgaattgttcatcgacccattttcatacaacatgagaaaatgcaaaatt---acatgattataataatcactaacccccttacctt 29188201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 261
Target Start/End: Original strand, 34939428 - 34939688
Alignment:
13 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || |||||||||||     
34939428 catttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagc 34939527  T
113 aacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||| || | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| | ||  ||||||||||||||||||    
34939528 aacagttatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgaagaacactaacccccttacctta 34939627  T
201 ggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    ||||||||| |||||| ||||   |||||||||||||||||||||| ||||||||||||||    
34939628 ggttatgattaattcacacttagacttcactttagctcctaattcttcaatcttcaagttt 34939688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 23514729 - 23514901
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
23514729 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 23514828  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
23514829 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttag 23514901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 27009986 - 27010179
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||| ||||   || |||||    
27009986 aacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacga 27010085  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||   |  ||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||| | || ||||||||||||||||||||||    
27010086 atttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaatt--acatgattgtgataataactaacccccttaccttag 27010179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 25426773 - 25426965
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
25426773 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 25426872  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| || || |||||||||||||||||    
25426873 atttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataatcactaacccccttacctt 25426965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 12519 - 12711
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
12519 aacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 12618  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| ||||||||||||||||||||||||| | ||||||  |||||||||| || ||||||||||||||||||||    
12619 atttagcatgaattgttcatcaacccattttcatacaacatgagaaaatac-aaaattacacatgattatgataataactaacccccttacctt 12711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 18778099 - 18777907
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
18778099 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 18778000  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||  |  ||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| || || |||||||||||||||||    
18777999 atttaacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataatcactaacccccttacctt 18777907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 19500044 - 19500236
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
19500044 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 19500143  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  || |||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| || || |||||||||||||||||    
19500144 atttagcatgaagtgttcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataatcactaacccccttacctt 19500236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 21073702 - 21073510
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||| ||| ||||||||||||||| ||| ||||   || |||||    
21073702 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagagcacga 21073603  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  |||||||||| || ||||||||||||||||||||||||||| ||||||  |||||||||| || ||||||||||||||||||||    
21073602 atttagcatgaattgttcattaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataataactaacccccttacctt 21073510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 22366588 - 22366396
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
22366588 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 22366489  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||| ||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| || || |||||||||||||||||    
22366488 atttagcatgaattgctcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataatcactaacccccttacctt 22366396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 18531188 - 18531073
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
18531188 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 18531089  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
18531088 gaatttagcaacaatt 18531073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 11212153 - 11211983
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| || |||||||||||||    
11212153 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaa 11212054  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
11212053 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgataataactaacccccttacctt 11211983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 23507107 - 23507344
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||| |||    
23507107 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcac 23507206  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| || | |  ||||||||||||  ||||    | ||| || | |||||||| || |  ||||||||||||||||||| |    
23507207 gaatttagcaacaattatccat-aagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttaccttagat 23507305  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||||| |||||  ||||||||||| |||||||    
23507306 aaagattaattccaacttatgcttcactttaactcctaa 23507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 1219608 - 1219436
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
1219608 aacatgtaatttcacccacaaacataccataatcatcaattaatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 1219509  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||||||||    
1219508 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataatcactaacccccttaccttag 1219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 35791186 - 35791014
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||  |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
35791186 aacatgtaatttcactcacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaa 35791087  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
35791086 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 35791014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 43443502 - 43443312
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
43443502 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 43443403  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||  |  ||||||||||||||||||||||||| |||||||||| ||||   ||||  |||||||||| || || |||||||||||||||||    
43443402 atttaacatgaattgttcatcaatccattttcatataacatgagaatatgc---aattacacatgattatgataatcactaacccccttacctt 43443312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 22053954 - 22053839
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||| |||    
22053954 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcac 22053855  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
22053854 gaatttagcaacaatt 22053839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 10778058 - 10777888
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
10778058 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 10777959  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || || |||| ||||||||||||    
10777958 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataatcactaccccccttacctt 10777888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 4200092 - 4199900
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| |||    || |||||    
4200092 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacga 4199993  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  |||| ||||||||  ||||||||||||||||||||| |||| ||||||  |||||||||| || ||  ||||||||||||||||    
4199992 atttagcatgaattattcatcaactcattttcatacaacatgagaatatgc-aaaattacacatgattatgataatccctaacccccttacctt 4199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 7425492 - 7425664
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || | |||| ||| ||||| |  || ||| ||| ||||   || ||||||||||| || |||||||||||||    
7425492 aacatgtaatttcacccacaaacataccataaccatcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaa 7425591  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
7425592 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 7425664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 27182668 - 27182429
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||     
27182668 acaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcat 27182569  T
104 gaatttagtaacaattgttcatcaatc-cattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttagg 202  Q
    |||||||| ||||||| | ||| |  |  |  ||||||||||||  ||||||  | ||| |||  |||||||| ||||  ||||||||||||||||||||    
27182568 gaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttaccttagg 27182469  T
203 ttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    | | ||| ||| | |||||  |||||| ||||||||||||    
27182468 taaagattaatcccaacttaggcttcaatttagctcctaa 27182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 17471676 - 17471506
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||  ||||||||||||||||    
17471676 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaa 17471577  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||||||||||||||||    
17471576 cccattttcatacaacatgagaaaatacaaaatttgtacatgattatgataataactaacccccttacctt 17471506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 21932469 - 21932299
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
21932469 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 21932370  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
21932369 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 21932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 21938639 - 21938469
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
21938639 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 21938540  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
21938539 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 21938469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 35582204 - 35582374
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
35582204 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 35582303  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
35582304 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 35582374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 36989858 - 36989688
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| |||| | || ||||||||||  |||||||||||| |||    
36989858 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaa 36989759  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     ||||||||||||||||||||||| |||||| |||| |||||||||| || ||||||||||||||||||||    
36989758 cccattttcatacaacatgagaaattgcaaagattgtacatgattatgataataactaacccccttacctt 36989688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 20623113 - 20623226
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
20623113 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 20623212  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
20623213 atttagcaacaatt 20623226  T

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Target: chr5; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 21233647 - 21233534
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
21233647 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 21233548  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
21233547 atttagcaacaatt 21233534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 9730310 - 9730216
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
9730310 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaattgcttcaatcttcaagttt 9730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 25900525 - 25900412
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||    
25900525 aacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggagcacga 25900426  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
25900425 atttagcaacaatt 25900412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 37052911 - 37053001
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaatt 119  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| ||||||||||| |||||||    
37052911 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 37053001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 16536341 - 16536454
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||| | ||||||| |||||    
16536341 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggagcacga 16536440  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
16536441 atttagcaacaatt 16536454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 22883088 - 22883006
Alignment:
113 aacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaaccccctta 195  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||    
22883088 aacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccccctta 22883006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 17909838 - 17909921
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||||||||||| ||| |||||||  ||||||||||| ||||||||||| |||||||||||||| ||||    
17909838 actaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccccc 17909921  T

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Target: chr5; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 23328812 - 23328897
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
23328812 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 23328897  T

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Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 24616416 - 24616501
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
24616416 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 24616501  T

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Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 24712792 - 24712877
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
24712792 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 24712877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 24745810 - 24745895
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
24745810 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 24745895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 7529243 - 7529326
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||| | ||||| ||| |||||||  |||||||||||||||| |||||| |||||||||||||| ||||    
7529243 actaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcccaattcttcaatcttcaagtttccccc 7529326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 32950862 - 32951086
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgt----tca 124  Q
    |||||||||||||| | |||||||||||||||||||||| | || || || || ||| ||| |||||| || ||||||||||  ||||||| |    |||    
32950862 aacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattca 32950961  T
125 t--caatccat---tttcatacaacat--gagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaa 217  Q
    |  ||||| |    ||||||||||||   |||||  ||||| ||||||||||| |||| ||||  ||||||||||||||||||  | ||||| |||||||    
32950962 ttccaatcaacccatttcatacaacaaaggagaagttgcaataattgaacatggttatgatgaagactaacccccttaccttaaataatgattaattcaa 32951061  T
218 acttgagcttcactttagctcctaa 242  Q
    ||||   ||||| ||||||||||||    
32951062 acttagacttcaatttagctcctaa 32951086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 21310793 - 21310709
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||| | |||| || |||||||||    
21310793 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 29918129 - 29918212
Alignment:
27 tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    |||||||| ||||||||||||||  || |||||||||||||||| ||| || |||||||||||| | | ||||| |||||||||    
29918129 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 25005137 - 25005210
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 241  Q
    |||||||| ||||  |||||||||||||| |||| | ||||| ||| |||||||  ||||||||||||||||||    
25005137 atgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 23981600 - 23981536
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| || |||||||||||  || ||||||||| |||||| |||||||||||||||||||    
23981600 ttgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatatcat 23981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 22885806 - 22885869
Alignment:
27 tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    |||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
22885806 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 22885869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 2032135 - 2032207
Alignment:
170 gattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    |||||| |||| |||||||||||||||||||| | | ||| ||  |||||||  |||||| ||||||||||||    
2032135 gattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 2032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 18531018 - 18530946
Alignment:
170 gattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    |||||| ||||  ||||||||||||||||||| ||||||| ||    |||||  |||||||||||||||||||    
18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 18530946  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 19862372 - 19862436
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-tttatgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| || |||||| ||||||||||||    
19862372 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcat 19862436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 21222692 - 21222628
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  ||  |||||||| |||||| |||||| ||||||||||||    
21222692 ttgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcat 21222628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 21297259 - 21297195
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||| | ||||||||||||    
21297259 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcgttcaaacatatcat 21297195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 24084223 - 24084303
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||||||||| ||||||||  || ||||||||| |||||| ||| || |||||||||||    
24084223 tatcattttcacatactatgaacatgtaattttaccaacaacaattcaattatcaccaatttcatgtattcaaacatatca 24084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 22227953 - 22228146
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |  || ||| ||| ||||   || |||||    
22227953 aacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacga 22228052  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
22228053 atttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 22232650 - 22232843
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |  || ||| ||| ||||   || |||||    
22232650 aacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacga 22232749  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
22232750 atttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 45051565 - 45051758
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| |||||  ||||||    
45051565 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacac 45051664  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||| ||| |  ||||||||||||| |||||||||||||||||||||||||||||||     |||||||||| || |  ||||||||||||||||||    
45051665 gaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatc---acatgattatgataaagactaacccccttacctta 45051758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 2116397 - 2116590
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||   | |||    
2116397 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcac 2116496  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||| ||| |  ||||||||||||| ||||||| ||||||||||||||||||||||| |   |||||||||| || || ||||||||| ||||||||    
2116497 gaatctagcatgaattgttcatcaacccatttttatacaacatgagaaaatgcaaaatt---acatgattatgataatcactaacccctttacctta 2116590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 5072495 - 5072304
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||| ||| ||||   || |||||    
5072495 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcacga 5072396  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| ||||||||||||||| |||| |||||||||||||  |||||||| | || ||||||||||||||||||||    
5072395 atttagcatgaattgttcatcaacccattttcatacaacttgagtaaatgcaaaaatt--acatgattgtgataataactaacccccttacctt 5072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 41394364 - 41394559
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||    
41394364 acaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggagcac 41394463  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    |||||||| ||||||  | ||| |||| |  ||||||||||||  ||||||  | ||| |||  |||||||| || |  ||||||||||||||||||    
41394464 gaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 41394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 18601225 - 18601068
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||   || || ||    
18601225 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatga 18601126  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaatt 163  Q
    |||||| |  ||||||||||||| |||||||||||||||||||| |||||||||||||    
18601125 atttagcatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaatt 18601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 20913174 - 20913287
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
20913174 aacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 20913273  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
20913274 atttagcaacaatt 20913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 20931489 - 20931602
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
20931489 aacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 20931588  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
20931589 atttagcaacaatt 20931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 17148735 - 17148898
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| |||||||    || |||||||||||  |||||||||||||||    
17148735 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaa 17148834  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaaccccc 192  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||    
17148835 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccc 17148898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 20893747 - 20893509
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||     
20893747 acaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaa 20893648  T
104 gaatttagtaacaattgttcatcaatc-cattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttagg 202  Q
    |||||||| ||||||| | ||| |  |  |  ||||||||||||  ||||||  | ||| |||  |||||||| ||||  ||||||||||||||||||||    
20893647 gaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaat-tacaaaatgatgatgattatgatgaagactaacccccttaccttagg 20893549  T
203 ttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    | | ||| ||| | |||||  |||||| ||||||||||||    
20893548 taaagattaatcccaacttaggcttcaatttagctcctaa 20893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 20445824 - 20445936
Alignment:
7 acttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaa 106  Q
    ||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||    
20445824 acttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaa 20445923  T
107 tttagtaacaatt 119  Q
    ||||| |||||||    
20445924 tttagcaacaatt 20445936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 18059846 - 18059676
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||  ||||||||||||||||    
18059846 aacatgtaatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaa 18059747  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||  |||||||||| || ||||||||||||||||||||    
18059746 cccattttcatacaacatgagaaaatgcaaagattatacatgattatgataataactaacccccttacctt 18059676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 20531589 - 20531701
Alignment:
7 acttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaa 106  Q
    ||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| ||||| ||||||    
20531589 acttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaa 20531688  T
107 tttagtaacaatt 119  Q
    ||||| |||||||    
20531689 tttagcaacaatt 20531701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 46523629 - 46523728
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctta 200  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| || |||||||||||||||||||||    
46523629 cacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaatggaacatgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 20254646 - 20254736
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgcta 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| |||||||||||||||    
20254646 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcataattcctcaatcttcaag-tttccccctttgcta 20254736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 17004806 - 17004976
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
17004806 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 17004905  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
17004906 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 17004976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 37844566 - 37844456
Alignment:
9 ttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatt 108  Q
    ||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| || |||||    
37844566 ttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatt 37844467  T
109 tagtaacaatt 119  Q
    ||| |||||||    
37844466 tagcaacaatt 37844456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 19962515 - 19962417
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
19962515 cacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 19962417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 38055179 - 38055009
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| |||||   | ||||||||||  |||||||||||| |||    
38055179 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaa 38055080  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||| ||||||| |||| |||||||||| || ||||||||||||||||||||    
38055079 cccattttcatacaacatgagaagatgcaaagattgtacatgattatgataataactaacccccttacctt 38055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 51452636 - 51452749
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||| | |||||    
51452636 aacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaagcacga 51452735  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
51452736 atttagcaacaatt 51452749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 22035702 - 22035787
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
22035702 aattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 22035787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 7640935 - 7640850
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
7640935 aattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 7640850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 17609091 - 17609155
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||| |||||||    
17609091 ttgaacatgcaatttcaccaacaacaatccaattatcaccaatttcatgcattcaaatatatcat 17609155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 21195160 - 21195240
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||  ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||    
21195160 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 21195240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 22143445 - 22143361
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| || |||||||||||  || |||||||||  ||||| ||||||||||||| ||||| | |||| || |||||||||    
22143445 ttgaacatgcaaattcaccaacaacaattcaattatcacaaatttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 9458 - 9203
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    | |||    
9458 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcac 9359  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    ||||||   |  ||||||||||||| |||||||||||||||||||| |||||||||| |   |||||||| | || |||||||||||||||||||||| |    
9358 gaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttaccttagat 9262  T
204 tatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
     ||| | |||   |||||  ||||||||||||||||||||| || ||||||||||||||    
9261 gatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 16356 - 16101
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    | |||    
16356 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcac 16257  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    ||||||   |  ||||||||||||| |||||||||||||||||||| |||||||||| |   |||||||| | || |||||||||||||||||||||| |    
16256 gaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttaccttagat 16160  T
204 tatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
     ||| | |||   |||||  ||||||||||||||||||||| || ||||||||||||||    
16159 gatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 16101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 21223 - 21031
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||| ||| |||    || |||||    
21223 aacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaacaagagcacga 21124  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||    
21123 atttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattgtacatgattatgataataactaacccccttacctt 21031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 14168 - 13977
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| ||| ||||   || ||||     
14168 aacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatcacagcaagagcacg- 14070  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| || |||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||    
14069 atttagcaagaattgtgcatcaacccattttcatacaacatgagaaaatgc-aaaattgtacatgattatgataataactaacccccttacctt 13977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 13434 - 13242
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |  || |||    
13434 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacactaagagcac 13335  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||| ||| |  ||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||| || || |||||||||||||||||    
13334 gaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatg-aaaaatt--acatgattatgataatcactaacccccttacctt 13242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 5323 - 5130
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |  || ||| ||| ||||   || |||||    
5323 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacga 5224  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||  || ||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||||| ||||||||||    
5223 atttaacaagaattgttcatcaacccattttcatacaacgtgagaaaatgcaaaaattgtacatgattatgataataactaactcccttacctt 5130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 3866 - 4062
Alignment:
6 aacttatcattttt-acataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacg 104  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |  || ||| ||| |||    || ||||    
3866 aacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacg 3965  T
105 aatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| |||||||||||||    
3966 aatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaaccccttaccttag 4062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 4 - 274
Target Start/End: Original strand, 48329 - 48610
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
48329 acaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcac 48428  T
104 gaatttagtaacaatt----gttcat------caatccattttcatacaacatgagaaaatgcaa--aaattgaacatgattataatgataactaacccc 191  Q
    |||||||| |||||||     |||||      ||| ||| |||||||||||| |  ||| |||||  |||     ||||||||| | ||  |||||||||    
48429 gaatttagcaacaattatcaattcattccaaccaaccca-tttcatacaacaaggaaaattgcaaacaaaacattcatgattatgaagaagactaacccc 48527  T
192 cttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttccccctttgcta 274  Q
    ||||| |||||||||||| |||||||| ||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
48528 cttacattaggttatgattaattcaaatttgggcttcactttagctcctaatttcttcaatcttcaag-tttccccctttgcta 48610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 3703 - 3466
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
3703 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 3604  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| |  || |||| |  |||||||||| |  ||||||  | ||| |||| |||||||| |  |  ||||||||||||||||||| |    
3603 gaatttagcaacaattatctat-aatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttaccttagat 3505  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||||||||||||||||    
3504 aaagattaatcccaacttaggcttcactttagctcctaa 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 1266 - 1381
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| | ||||||| |||    
1266 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcac 1365  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
1366 gaatttagcaacaatt 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 103; Significance: 3e-51; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 48740 - 48977
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
48740 acaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 48839  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| || | |  ||||||||||||  ||||||  | ||| |||  |||||||| || |  |||||||||||||||||||||    
48840 gaatttagcaacaattatccat-aagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaggt 48938  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     ||| |||||  ||||||  |||| ||||||||||||||    
48939 aatgctcaatctaaacttaggctttactttagctcctaa 48977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 154095 - 153923
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    ||||||||| |||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   || ||||||||||| ||||||||||||||||    
154095 aacatgtaacttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaa 153996  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
153995 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 153923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 61154 - 61048
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccc 267  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
61154 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagcttaactttagctcataattctccaatcttcaagttttccccc 61055  T
268 tttgcta 274  Q
    |||||||    
61054 tttgcta 61048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 36238 - 36430
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||| |||||||||||||||||||||||||| || |||||||| || |||||||||||| ||| ||     || |||||    
36238 aacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatcactacaagagcacga 36337  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| ||| |||||||||||||||||| |||| ||||||  |||||||||| || || | |||||||||||||||    
36338 atttagcatgaattgttcatcaacccagtttcatacaacatgagaatatgc-aaaattacacatgattatgataatcattaacccccttacctt 36430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 169951 - 169830
Alignment:
74 catacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgatt 173  Q
    |||||||||||| ||| ||||   || ||||||||||| |  ||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||    
169951 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattatacatgatt 169853  T
174 ataatgataactaacccccttac 196  Q
    || || || ||||||||||||||    
169852 atgataatcactaacccccttac 169830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 1411 - 1220
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||   || |||||    
1411 aacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacga 1312  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||| |  ||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||| | || ||||||||||||| ||||||    
1311 atttagcatgaattgttcatcaacccattttcatacaacatgagtaaatgcaaaaatt--acatgattgtgataataactaacccccctacctt 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6188 - 6070
Alignment:
1 tttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaa 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||     
6188 tttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 6089  T
101 cacgaatttagtaacaatt 119  Q
    ||||||||||| |||||||    
6088 cacgaatttagcaacaatt 6070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 13648 - 13890
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| || |||    
13648 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcac 13747  T
104 gaatttagtaacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaacccc 191  Q
    |||||||| ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || | ||||||||||| ||||  |||||||||    
13748 gaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaataaacatgattatgatgaagactaacccc 13847  T
192 cttaccttaggttatgatcaattcaaacttgagcttcacttta 234  Q
    |||||||||| | ||||| ||| |||||||  |||||||||||    
13848 cttaccttagataatgattaatccaaacttaggcttcacttta 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 19348 - 19463
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
19348 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 19447  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
19448 gaatttagcaacaatt 19463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 21432 - 21547
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
21432 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 21531  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
21532 gaatttagcaacaatt 21547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 1077 - 962
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
1077 acaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 978  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
977 gaatttagcaacaatt 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 238
Target Start/End: Complemental strand, 10427 - 10218
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||||||| ||||   || ||||||||||| ||||||| ||||||||    
10427 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaa 10328  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttc 228  Q
     |||||||||||||||||||||||||||||||||||||||||||||| | ||  || |||||||||||||||| | ||||| ||  | |||||  |||||    
10327 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttaccttagatgatgattaaccccaacttaggcttc 10228  T
229 actttagctc 238  Q
    ||||||||||    
10227 actttagctc 10218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 1602 - 1430
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| ||||| |  || ||| |||||||    || ||||||||||| ||||||||||||||||    
1602 aacatgtaatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaa 1503  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
1502 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttag 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 1663 - 1491
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||   |  ||||| ||||| ||||||||||||||||    
1663 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaa 1564  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
1563 cccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgataataactaacccccttaccttag 1491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 89; Significance: 6e-43; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 8301 - 8051
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||| || |||    
8301 acaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagttagagcac 8202  T
104 gaatttagtaacaattgttca----------tcaatccattttcatacaac--atgagaaaatgcaaaaattgaacatgattataatgataactaa-ccc 190  Q
    |||||||| ||||||| | ||          |||| |||| ||||||||||  |||||||| ||||| || ||||||||||||| ||||  ||||| |||    
8201 gaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccc 8102  T
191 ccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 241  Q
    ||||||||||| | ||||| ||| |||||||  |||||| |||||||||||    
8101 ccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 26536 - 26298
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||| | ||||||||||||||||| | ||||||| |||    
26536 acaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcac 26437  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| |    |  ||||||||||||  ||||||  | ||| ||| ||||||||| || |  ||||||||||||||||||| |    
26436 gaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttaccttagat 26337  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | | |||  |||||| ||||||||||||    
26336 gaagattaatcccatcttaggcttcaatttagctcctaa 26298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 12049 - 12137
Alignment:
154 tgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    ||||| |||||||||||||||| ||||  ||||||||||||| ||||| | ||||| ||| |||||||  |||||| ||||||||||||    
12049 tgcaataattgaacatgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaa 12137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 8991 - 9106
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| |||    
8991 acaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcac 9090  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
9091 gaatttagcaacaatt 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 148863 - 148978
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
148863 acaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 148962  T
104 gaatttagtaacaatt 119  Q
     ||||||  |||||||    
148963 aaatttaacaacaatt 148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 53509 - 53573
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaat-ttatgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||| | |||||| ||||||||||||    
53509 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatatcatgcattcaaacatatcat 53573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 261
Target Start/End: Original strand, 54584 - 54818
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||||| |  || ||| ||| ||||   | |||||||||||  ||||||| ||||||||    
54584 aacatgcaatttcacccacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaa 54683  T
129 tccattttcatacaaca-tgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagctt 227  Q
     |||||||||||||||| ||||||| ||||| |||||||||||||||| ||||  ||||||| ||||||||||| | ||| | ||| ||||||| |||||    
54684 cccattttcatacaacaatgagaaattgcaataattgaacatgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagctt 54783  T
228 cactttagctcctaa-ttctccaatcttcaagttt 261  Q
    || || |||||||||  ||| ||||||||||||||    
54784 caattaagctcctaagctcttcaatcttcaagttt 54818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 29 - 266
Target Start/End: Original strand, 45198 - 45437
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |  || ||| ||| |||    |  ||||||||||  ||||||| ||||||||    
45198 aacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatcaa 45297  T
129 tccattttcatacaaca-tgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagctt 227  Q
     |||||||||||||||| ||||||| ||||| |||||||||||||||| ||||  ||||||||||||||||||| | ||| | ||| |||||||  ||||    
45298 cccattttcatacaacaatgagaaattgcaataattgaacatgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggctt 45397  T
228 cactttagctcctaa-ttctccaatcttcaagttttcccc 266  Q
    || || |||||||||  ||| |||||||||||||| ||||    
45398 caattaagctcctaagctcttcaatcttcaagtttccccc 45437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 180 - 371
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||   || |||||    
180 aacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacga 279  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||   |  ||||||||||||| ||||||||||| ||||||||  ||||||||| |   |||||||| | || ||||||||||||||||||||||    
280 atttgacatgaattgttcatcaacccattttcatataacatgag-caatgcaaaatt---acatgattttgataataactaacccccttaccttag 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 37034 - 36919
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
37034 acaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 36935  T
104 gaatttagtaacaatt 119  Q
    |||||||  |||||||    
36934 gaatttaacaacaatt 36919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 51303 - 51188
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| |||    
51303 acaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcac 51204  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
51203 gaatttagcaacaatt 51188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 261
Target Start/End: Original strand, 54039 - 54275
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcat 125  Q
    ||||||||||||||||||| |||| ||||| || |||||||||| ||||| |  || | | ||| |||||  || ||||||||||| | |||||||||||    
54039 ttgaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaacagcatcacagtaagagcacgaatttagcatcaattgttcat 54138  T
126 caatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagc 225  Q
    ||| ||||||||||| ||||||||||||||||||||||  |  ||||||| |||| ||| |||||||||||||||| | ||| | |||   |||||  ||    
54139 caacccattttcataaaacatgagaaaatgcaaaaatttgaattgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggc 54238  T
226 ttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
    |||||| |||||||||||| || ||||||||||||||    
54239 ttcactatagctcctaattgcttcaatcttcaagttt 54275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 655 - 540
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||| ||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||    
655 acaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 556  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
555 gaatttagcaacaatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 12255 - 12370
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||    
12255 acaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcac 12354  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
12355 gaatttagcaacaatt 12370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 123285 - 123170
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||    
123285 acaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcac 123186  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
123185 gaatttagcaacaatt 123170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 5674 - 5792
Alignment:
7 acttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaa 106  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| | ||||||| ||||||    
5674 acttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagttggagcacgaa 5773  T
107 tttagtaacaattgttcat 125  Q
    ||||| ||||||| |||||    
5774 tttagcaacaattattcat 5792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 9020 - 9257
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||| |||  |||| |||    
9020 acaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcac 9119  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    |||||||| ||||||| | ||| || | |  ||| |||||| |  ||||||    ||| |||| |||||||| || |  ||||||||||||||||||| |    
9120 gaatttagcaacaattttccat-aagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttaccttagat 9218  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||||||||||||||||    
9219 aaagattaatcccaacttaggcttcactttagctcctaa 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 7472 - 7374
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
7472 cacgaatttagtaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaatggaacatgattatgataataactaacccccttacctt 7374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 10764 - 10666
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
10764 cacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 10666  T

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Target: scaffold0001 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 172047 - 172284
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||    
172047 acaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcac 172146  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    | |||||| |||| || | ||| |||| |  || |||||||||  ||||||  | ||| |||  |||||||| || |  ||||||||||||||||||| |    
172147 gtatttagcaacagttatccat-aatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttagat 172245  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||||||||||||||||    
172246 aaagattaatcccaacttaggcttcactttagctcctaa 172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 177750 - 177987
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||    
177750 acaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcac 177849  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    | |||||| |||| || | ||| |||| |  || |||||||||  ||||||  | ||| |||  |||||||| || |  ||||||||||||||||||| |    
177850 gtatttagcaacagttatccat-aatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttagat 177948  T
204 tatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
     | ||| ||| | |||||  |||||||||||||||||||    
177949 aaagattaatcccaacttaggcttcactttagctcctaa 177987  T

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Target: scaffold0001; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 164888 - 164810
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||||    
164888 actaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagttt 164810  T

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Target: scaffold0076 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 43142 - 43333
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||  |||   || |||||    
43142 aacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatcccagcaagagcacga 43241  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgag-aaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||   |  ||||| ||||||| |||||||||||||||||||| ||||||||||| |   ||||| || | ||  |||||||||||||||||||    
43242 atttgacatgaattgctcatcaacccattttcatacaacatgagaaaaatgcaaaatt---acatgtttgtgatagtaactaacccccttacctt 43333  T

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Target: scaffold0076; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 39271 - 39441
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
39271 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 39370  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
39371 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 39441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 5182 - 5067
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||| | |||||||||  ||    
5182 acaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtac 5083  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
5082 gaatttagcaacaatt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 41871 - 41986
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||| ||||||||| |||    
41871 acaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 41970  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
41971 gaatttagcaacaatt 41986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 89575 - 89460
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    ||||||||| |||| | | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||    
89575 acaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcac 89476  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
89475 gaatttagcaacaatt 89460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 79704 - 79766
Alignment:
28 gaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||| |||||||||| |||  |  |||||||||||||||| |||||||||||||||||||    
79704 gaacatgcaatttcaccaccaacaactcaattatcatcaatttcatgcatacaaacatatcat 79766  T

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Target: scaffold0012 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 247563 - 247448
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || ||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
247563 acaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcac 247464  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
247463 gaatttagcaacaatt 247448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 34246 - 34033
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| | | ||||   || ||||||||||| ||||||| ||||||||    
34246 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaa 34147  T
129 tccattttcatacaaca-tgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagctt 227  Q
     |||||| ||||||||| |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||| | | ||| ||  ||||||   ||||    
34146 cccattt-catacaacaatgagaaaatgcaaaaattgaacatgattatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgctt 34048  T
228 cactttagctcctaa 242  Q
    || ||||||||||||    
34047 caatttagctcctaa 34033  T

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Target: scaffold0008 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 31782 - 31593
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    |||||||||||||| ||||  |||| |||||||||||||||||||||||||| || |||||||| |||||| |||||||| ||| ||     || |||||    
31782 aacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatcaccacaagagcacga 31683  T
106 atttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttac 196  Q
    |||||| |  |||||||||||||  ||||||||||||||||||||| |||| ||||||  |||||||||| || || ||||||||||||||    
31682 atttagcatgaattgttcatcaactcattttcatacaacatgagaatatgc-aaaattacacatgattatgataatcactaacccccttac 31593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 128290 - 128175
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||| ||  |||||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| | |||    
128290 acaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcac 128191  T
104 gaatttagtaacaatt 119  Q
    |||||||| |||||||    
128190 gaatttagcaacaatt 128175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 2560 - 2733
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| |||| ||||| || | |||||||| ||||| |  || ||| ||| || |   || |||||||| || ||||||||||||||||    
2560 aacatgtaatttcacccacaaacataccataagcatcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaa 2659  T
129 tccattttcatacaacatgagaaaatgcaaaaa-ttgaacatgattataatgataactaacccccttaccttag 201  Q
     |||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||    
2660 cccattttcatacaacatgagaaaatgcaaaaatttgtacatgattatgataataactaacccccttaccttag 2733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 29402 - 29500
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
29402 cacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 29500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 31477 - 31647
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| | || ||||| || |||||||||| | ||| |  || ||| ||| ||||   || ||||||||||  |||||||||||| |||    
31477 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaa 31576  T
129 tccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
     |||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||    
31577 cccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 39814 - 39935
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcatcaa 128  Q
    |||||||||||||||| ||||  |||| || |||||||||| ||||| |  || |||  || ||||   || ||||||||||| ||||||||||||||||    
39814 aacatgtaatttcacccacaaaaataccataatcatcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaa 39913  T
129 tccattttcatacaacatgaga 150  Q
     |||||||||||||||||||||    
39914 cccattttcatacaacatgaga 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 6127 - 6043
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttcccc 266  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
6127 actaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaatttcttcaatcttcaagttttcccc 6043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 22684 - 22803
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
22684 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 22783  T
106 atttagtaacaattgttcat 125  Q
    |||||| ||||||| |||||    
22784 atttagcaacaattattcat 22803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 26939 - 27052
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
26939 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 27038  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
27039 atttagcaacaatt 27052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 1701 - 1588
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
1701 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 1602  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
1601 atttagcaacaatt 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 37185 - 37072
Alignment:
6 aacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacga 105  Q
    ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||    
37185 aacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 37086  T
106 atttagtaacaatt 119  Q
    |||||| |||||||    
37085 atttagcaacaatt 37072  T

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Target: scaffold0574 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 9429 - 9345
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttcccc 266  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| ||||    
9429 actaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaatttcttcaatcttcaagtttccccc 9345  T

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Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 272167 - 272402
Alignment:
4 acaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacac 103  Q
    |||||||||||||| | | || |||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||  ||    
272167 acaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtac 272266  T
104 gaatttagtaacaattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggt 203  Q
    | |||||| || | || | ||| |||| |  || |||||| ||  ||||||  | ||| |||  |||||||| || |  ||||||||||||||||||| |    
272267 gtatttagcaatatttatccat-aatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttagat 272365  T
204 tatgatcaattcaaacttgagcttcactttagctcct 240  Q
     | ||| ||| | |||||  |||||||||||||||||    
272366 aaagattaatcccaacttaggcttcactttagctcct 272402  T

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Target: scaffold0387 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 7129 - 7034
Alignment:
166 acatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt 261  Q
    |||||||||| | ||  ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||||    
7129 acatgattatgaagaacactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagttt 7034  T

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Target: scaffold0387; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 1063 - 962
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaat 107  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || |||||||||||| | | || ||||||||||    
1063 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcatcataattagaacacgaat 964  T
108 tt 109  Q
    ||    
963 tt 962  T

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Target: scaffold0516 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 12143 - 11982
Alignment:
101 cacgaatttagtaacaattgttcatcaatccattttcatacaac-atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttacctt 199  Q
    ||||||||||  | |||||||||||||| ||||||||||||||| |||||||| || |||| |||||  ||||||| || ||||||||||||||||||||    
12143 cacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa-tgaaaaatttgaaattgattatgataataactaacccccttacctt 12045  T
200 aggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 261  Q
    || | ||| | ||||  |||||  ||||||||||||||||||||| || ||||||||||||||    
12044 agatgatgtttaattttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 11982  T

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Target: scaffold0173 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 5548 - 5647
Alignment:
167 catgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||| ||||  ||||||||||||||||||||| ||||| ||| |||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
5548 catgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaattcttcaatcttcaagtttccccc 5647  T

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Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 7464 - 7615
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattc 215  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||||||| |||| ||| |||||||||||||||| | ||| | |||      
7464 aattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaacccccttaccttagatgatgtttaatct 7563  T
216 aaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccc 266  Q
     ||||  ||||||||||||||||||||||  | |||||||||||||| ||||    
7564 taactaaagcttcactttagctcctaattgtttcaatcttcaagtttccccc 7615  T

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Target: scaffold0892 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 3578 - 3715
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttcat 125  Q
    ||||||||||||||||||| |||||||||| || |||||||||| ||| | |  || | | ||| |||||  || ||| ||||||| | |||||||||||    
3578 ttgaacatgtaatttcacccacaatcataccataatcatcaattcatggacaagaaaacaacatcacagtaagagcactaatttagcatcaattgttcat 3677  T
126 caatccattttcatacaacatgagaaaatgcaaaaatt 163  Q
    ||| ||||||||||| ||||||||||||||||||||||    
3678 caacccattttcataaaacatgagaaaatgcaaaaatt 3715  T

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Target: scaffold0029 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 49769 - 49686
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    ||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||| |||||||||||||| ||||    
49769 actaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 49686  T

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Target: scaffold0361 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 266
Target Start/End: Original strand, 3360 - 3601
Alignment:
32 atgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaattgttca-----tc 126  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||| || ||| |||| | || ||||||||||| | ||||| | ||     ||    
3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccatttattc 3459  T
127 aat---ccattttcatacaac-atgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaaacttg 222  Q
    |||   ||  ||||| | ||| | |||||| ||||| || ||||||||||||| | ||  | ||| ||||||||||||| | ||||| |||||||||||     
3460 aatcaacccatttcacataacaaggagaaattgcaataaatgaacatgattatgaggaagaataa-ccccttaccttagatgatgattaattcaaactta 3558  T
223 agcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
     ||||||||||||||||||| ||| |||||||||||||| ||||    
3559 ggcttcactttagctcctaa-tcttcaatcttcaagtttccccc 3601  T

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Target: scaffold0183 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 6852 - 6937
Alignment:
116 aattgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||||||| || ||||||||||||||||||||||    
6852 aattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaacccccttaccttag 6937  T

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Target: scaffold0335 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 5508 - 5411
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||| ||||  ||||||||||||||||||||| ||||| ||| ||| |||  ||||||||||||||||||| ||| |||||||||||||| ||||    
5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa-tcttcaatcttcaagtttccccc 5411  T

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Target: scaffold0207 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 18026 - 18124
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||| ||||  ||||||||||||||||||| | ||||| ||| |||||||  ||||||||||| ||||||||||| ||||||||| |||| ||||    
18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaattcttcaatcttcatgtttccccc 18124  T

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Target: scaffold0118 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 34340 - 34242
Alignment:
168 atgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 266  Q
    |||||||| ||||  ||||||||||||||||||| | ||||| ||| |||||||  |||||| |||||||||||||||| ||||||| |||||| ||||    
34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaattcttcaatctttaagtttccccc 34242  T

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Target: scaffold0303 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 4362 - 4279
Alignment:
184 ctaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttttcccc 266  Q
    |||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||| ||| || |||||||||||||| ||||    
4362 ctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaaatccttcaatcttcaagtttacccc 4279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 23748 - 23665
Alignment:
118 ttgttcatcaatccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 201  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| |||||  ||| ||| || |||||||||||||||| |||||    
23748 ttgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgaatatgataataactaacccccttaacttag 23665  T

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Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 8173 - 8257
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| || |||||||||||  || |||||||||||||||| ||||||||||||||||||| | |||| || |||||||||    
8173 ttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 56195 - 55971
Alignment:
29 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcattacagttggaacacgaatttagtaacaat----tgttca 124  Q
    |||||||||||||| | |||||||||||||||||||||| | ||||| || || ||| ||| |||||| || ||||||||||  ||||||    | ||||    
56195 aacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatctattca 56096  T
125 t--caat---ccattttcatacaaca--tgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttaggttatgatcaattcaa 217  Q
    |  ||||   ||| ||||||||||||   |||||  ||||| |||||||||||||||| ||||  ||||||||||| ||| ||| | ||||| ||| |||    
56095 ttccaatcaaccaatttcatacaacaagggagaagttgcaataattgaacatgattatgatgaagactaaccccctgaccgtagataatgattaatccaa 55996  T
218 acttgagcttcactttagctcctaa 242  Q
    ||||  |||| | |||| |||||||    
55995 acttaggctttaatttatctcctaa 55971  T

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Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 95313 - 95392
Alignment:
183 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttt 261  Q
    ||||||||||||||||||||| ||||| ||| ||||| |  ||||||||||||||||| ||| || ||||||||||||||    
95313 actaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctcctaaatccttcaatcttcaagttt 95392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 1449 - 1348
Alignment:
10 tatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaat 107  Q
    ||||||||| ||||| || || |||| ||||||||||||||  || ||||||||| |||||| ||||||||||||||||||| | |||| || |||||||    
1449 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaat 1350  T
108 tt 109  Q
    ||    
1349 tt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 9704 - 9603
Alignment:
10 tatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaat 107  Q
    ||||||||| ||||| || || |||| ||||||||||||||  || ||||||||| |||||| ||||||||||||||||||| | |||| || |||||||    
9704 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaat 9605  T
108 tt 109  Q
    ||    
9604 tt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 22513 - 22452
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatat 86  Q
    ||||||||| || |||||||||||  || |||||||||||||||| ||||||||||||||||    
22513 ttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatat 22452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 2688 - 2752
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
2688 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcat 2752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 4751 - 4831
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatca 88  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| |||||| |||||||||||    
4751 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 4831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 22506 - 22442
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| || |||||||||||  ||  ||||||||||||||| |||||||||||||||||||    
22506 ttgaacatgcaaattcaccaacaacaattaaattatcatcaatttcatgcatacaaacatatcat 22442  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 70390 - 70307
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcattacagttggaacacgaattt 109  Q
    ||||||||| || ||||| |||||| ||  ||||||||||||||| ||||||||||||||||||| | |||||||  ||||||||    
70390 ttgaacatgcaaattcac-aacaataattgaattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 76931 - 76867
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||||||    
76931 ttgaacatgaaatttcaccaacaacaattcaattatcaacaatttcatgcattcaaacatatcat 76867  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 3397 - 3478
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
3397 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 3478  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 339 - 412
Alignment:
169 tgattataatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 242  Q
    ||||||| ||||  ||||||||||||||||||| | | ||| ||| |||||||  |||||| ||||||||||||    
339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaa 412  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 27643 - 27724
Alignment:
10 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||||| ||| || ||||||||||||    
27643 tatcattttcacatactatgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 27724  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 6824 - 6888
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-tttatgcatacaaacatatcat 89  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| || |||||| ||||||||||||    
6824 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcat 6888  T

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Target: scaffold0080 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 43882 - 43822
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacata 85  Q
    ||||||||| ||||||||||||||  || ||||||||| |||||| |||||| ||||||||    
43882 ttgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacata 43822  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 97282 - 97218
Alignment:
26 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattt-atgcatacaaacatatcat 89  Q
    ||||||||| |||| |||||||||  || ||||||||| |||||| |||||| ||||||||||||    
97282 ttgaacatgcaattccaccaacaacaattcaattatcaccaattttatgcattcaaacatatcat 97218  T

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