View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0771_low_6 (Length: 388)

Name: NF0771_low_6
Description: NF0771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0771_low_6
NF0771_low_6
[»] chr7 (42 HSPs)
chr7 (22-368)||(10000279-10000625)
chr7 (22-368)||(16418498-16418844)
chr7 (142-362)||(15760029-15760250)
chr7 (142-359)||(15950709-15950927)
chr7 (142-362)||(14250813-14251034)
chr7 (142-362)||(18979936-18980157)
chr7 (142-359)||(7822848-7823066)
chr7 (142-359)||(7830159-7830377)
chr7 (142-359)||(27101555-27101773)
chr7 (142-359)||(27108903-27109121)
chr7 (142-359)||(27176553-27176771)
chr7 (142-359)||(38783647-38783865)
chr7 (142-362)||(13758490-13758711)
chr7 (142-362)||(15927688-15927909)
chr7 (157-368)||(48622575-48622786)
chr7 (116-234)||(13321107-13321227)
chr7 (255-319)||(13572910-13572974)
chr7 (256-359)||(16478879-16478979)
chr7 (276-361)||(18253759-18253844)
chr7 (192-319)||(13910978-13911106)
chr7 (255-319)||(10989643-10989707)
chr7 (66-167)||(371132-371234)
chr7 (276-361)||(15862174-15862259)
chr7 (253-319)||(2437689-2437755)
chr7 (22-75)||(15760317-15760370)
chr7 (22-69)||(7822728-7822775)
chr7 (22-69)||(7830039-7830086)
chr7 (22-69)||(27101846-27101893)
chr7 (22-69)||(27109194-27109241)
chr7 (22-69)||(27176433-27176480)
chr7 (22-69)||(38783938-38783985)
chr7 (329-363)||(13321335-13321369)
chr7 (22-60)||(15852456-15852494)
chr7 (329-363)||(25124451-25124485)
chr7 (329-363)||(47480941-47480975)
chr7 (329-361)||(371418-371450)
chr7 (329-365)||(7293334-7293370)
chr7 (329-365)||(11516545-11516581)
chr7 (329-365)||(14113898-14113934)
chr7 (329-365)||(15441473-15441509)
chr7 (329-365)||(16212072-16212108)
chr7 (329-365)||(30262038-30262074)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-368)||(7210-7556)
[»] chr2 (42 HSPs)
chr2 (22-368)||(5888539-5888885)
chr2 (22-362)||(23774137-23774477)
chr2 (157-368)||(21142030-21142242)
chr2 (142-361)||(23777961-23778181)
chr2 (142-362)||(8943966-8944187)
chr2 (142-362)||(12728512-12728733)
chr2 (142-362)||(34824595-34824816)
chr2 (142-365)||(12641554-12641778)
chr2 (142-359)||(11231256-11231474)
chr2 (142-359)||(22513103-22513321)
chr2 (142-359)||(24685699-24685917)
chr2 (142-359)||(28775725-28775943)
chr2 (142-362)||(12635783-12636004)
chr2 (142-362)||(42177884-42178105)
chr2 (142-362)||(3798518-3798739)
chr2 (142-362)||(16935713-16935934)
chr2 (142-362)||(17006373-17006594)
chr2 (83-168)||(15633273-15633359)
chr2 (83-168)||(28031348-28031434)
chr2 (255-319)||(19886615-19886679)
chr2 (83-167)||(17204391-17204476)
chr2 (83-167)||(24826829-24826914)
chr2 (22-75)||(21141895-21141948)
chr2 (83-167)||(25213108-25213193)
chr2 (116-234)||(24341441-24341559)
chr2 (22-69)||(11231547-11231594)
chr2 (22-69)||(12728392-12728439)
chr2 (22-69)||(16935593-16935640)
chr2 (22-69)||(17006253-17006300)
chr2 (22-69)||(22513394-22513441)
chr2 (22-69)||(23778254-23778301)
chr2 (159-234)||(25265442-25265515)
chr2 (22-69)||(28776016-28776063)
chr2 (22-69)||(34824475-34824522)
chr2 (192-269)||(7507860-7507938)
chr2 (329-363)||(24341306-24341340)
chr2 (329-361)||(7507756-7507788)
chr2 (329-365)||(9652791-9652827)
chr2 (329-365)||(14906349-14906385)
chr2 (329-365)||(23820389-23820425)
chr2 (329-361)||(28031133-28031165)
chr2 (329-361)||(33128373-33128405)
[»] scaffold0183 (1 HSPs)
scaffold0183 (22-362)||(6598-6938)
[»] chr1 (21 HSPs)
chr1 (22-362)||(22035448-22035788)
chr1 (22-362)||(7640849-7641189)
chr1 (142-359)||(18059676-18059894)
chr1 (142-359)||(17004758-17004976)
chr1 (142-319)||(17148687-17148865)
chr1 (142-359)||(38055009-38055227)
chr1 (142-362)||(46523509-46523729)
chr1 (22-163)||(20254312-20254454)
chr1 (160-359)||(19962417-19962617)
chr1 (192-359)||(22227978-22228146)
chr1 (192-359)||(22232675-22232843)
chr1 (274-365)||(45051675-45051763)
chr1 (66-167)||(21650150-21650252)
chr1 (255-319)||(5072342-5072406)
chr1 (255-319)||(18601072-18601136)
chr1 (274-319)||(2116507-2116552)
chr1 (27-71)||(46523394-46523438)
chr1 (22-69)||(17004638-17004685)
chr1 (22-69)||(18059967-18060014)
chr1 (22-69)||(38055300-38055347)
chr1 (329-361)||(20893550-20893582)
[»] chr6 (43 HSPs)
chr6 (22-362)||(29869691-29870031)
chr6 (142-362)||(1556125-1556346)
chr6 (142-361)||(13620710-13620930)
chr6 (142-362)||(16232012-16232233)
chr6 (142-359)||(10488819-10489037)
chr6 (142-359)||(16376291-16376509)
chr6 (142-359)||(16383615-16383833)
chr6 (142-319)||(18086781-18086959)
chr6 (142-359)||(22225656-22225874)
chr6 (142-359)||(16556057-16556275)
chr6 (142-359)||(16632613-16632831)
chr6 (142-362)||(23977889-23978110)
chr6 (22-362)||(19610018-19610359)
chr6 (160-359)||(19299375-19299575)
chr6 (196-359)||(22251484-22251648)
chr6 (127-355)||(29665978-29666208)
chr6 (192-365)||(1650016-1650187)
chr6 (255-319)||(16825706-16825770)
chr6 (83-168)||(32276873-32276959)
chr6 (255-311)||(25175797-25175853)
chr6 (255-319)||(27653937-27654001)
chr6 (66-163)||(19629373-19629471)
chr6 (22-75)||(1556005-1556058)
chr6 (83-167)||(16300091-16300176)
chr6 (116-203)||(27740931-27741019)
chr6 (82-167)||(18823498-18823584)
chr6 (82-167)||(18839353-18839439)
chr6 (83-167)||(4991132-4991217)
chr6 (22-69)||(10488699-10488746)
chr6 (22-69)||(16376582-16376629)
chr6 (22-69)||(16383906-16383953)
chr6 (22-69)||(16556348-16556395)
chr6 (22-69)||(16632904-16632951)
chr6 (22-69)||(22225947-22225994)
chr6 (329-363)||(27751743-27751777)
chr6 (329-363)||(32276656-32276690)
chr6 (329-362)||(1657659-1657692)
chr6 (329-362)||(15862790-15862823)
chr6 (143-234)||(15862592-15862682)
chr6 (329-361)||(18823282-18823314)
chr6 (329-361)||(18839137-18839169)
chr6 (329-361)||(23148304-23148336)
chr6 (329-361)||(23153755-23153787)
[»] chr5 (49 HSPs)
chr5 (22-362)||(23328558-23328898)
chr5 (24-362)||(24616165-24616502)
chr5 (24-362)||(24712541-24712878)
chr5 (24-362)||(24745559-24745896)
chr5 (142-362)||(23514681-23514902)
chr5 (142-362)||(1219435-1219656)
chr5 (142-319)||(10777928-10778106)
chr5 (142-359)||(21932299-21932517)
chr5 (142-359)||(21938469-21938687)
chr5 (142-359)||(35582156-35582374)
chr5 (22-359)||(11211983-11212321)
chr5 (22-362)||(35791013-35791355)
chr5 (142-359)||(17471506-17471724)
chr5 (142-355)||(22883006-22883220)
chr5 (142-359)||(36989688-36989906)
chr5 (22-362)||(7425324-7425665)
chr5 (255-319)||(18777946-18778010)
chr5 (255-319)||(27010075-27010139)
chr5 (255-319)||(25426862-25426926)
chr5 (83-168)||(7528960-7529046)
chr5 (255-311)||(12608-12664)
chr5 (255-319)||(19500133-19500197)
chr5 (255-319)||(21073549-21073613)
chr5 (255-319)||(22366435-22366499)
chr5 (255-318)||(43443350-43443413)
chr5 (253-319)||(4199939-4200005)
chr5 (159-319)||(29188238-29188397)
chr5 (89-163)||(17909571-17909646)
chr5 (83-167)||(108943-109028)
chr5 (83-167)||(9730493-9730578)
chr5 (83-167)||(16105703-16105788)
chr5 (152-233)||(32950823-32950905)
chr5 (116-234)||(18531119-18531237)
chr5 (22-69)||(1219729-1219776)
chr5 (22-69)||(21932590-21932637)
chr5 (22-69)||(21938760-21938807)
chr5 (116-233)||(22053886-22054003)
chr5 (22-69)||(22883293-22883340)
chr5 (22-69)||(35582036-35582083)
chr5 (22-69)||(36989979-36990026)
chr5 (329-363)||(108725-108759)
chr5 (329-363)||(22053750-22053784)
chr5 (330-363)||(18530985-18531018)
chr5 (329-361)||(9730277-9730309)
chr5 (329-365)||(20623287-20623323)
chr5 (329-365)||(21233437-21233473)
chr5 (329-365)||(25900315-25900351)
chr5 (329-361)||(27182470-27182502)
chr5 (329-365)||(37053062-37053098)
[»] chr4 (38 HSPs)
chr4 (22-362)||(26339020-26339360)
chr4 (22-362)||(22351979-22352302)
chr4 (22-368)||(22738269-22738616)
chr4 (22-362)||(17145572-17145913)
chr4 (142-359)||(18169090-18169308)
chr4 (142-362)||(7131980-7132201)
chr4 (142-361)||(19020606-19020826)
chr4 (157-367)||(18248353-18248564)
chr4 (142-362)||(20000843-20001064)
chr4 (22-362)||(15287160-15287501)
chr4 (22-362)||(15294269-15294610)
chr4 (157-234)||(8374643-8374720)
chr4 (255-319)||(10644453-10644517)
chr4 (255-319)||(47357888-47357952)
chr4 (83-168)||(14500326-14500412)
chr4 (66-167)||(14996170-14996272)
chr4 (83-167)||(16522878-16522963)
chr4 (146-234)||(40885606-40885693)
chr4 (66-163)||(19697487-19697585)
chr4 (66-163)||(19708072-19708170)
chr4 (83-167)||(9295754-9295839)
chr4 (255-311)||(8378385-8378441)
chr4 (116-234)||(10104302-10104420)
chr4 (116-234)||(15675141-15675259)
chr4 (22-75)||(8374508-8374561)
chr4 (284-361)||(9795490-9795566)
chr4 (22-75)||(18248218-18248271)
chr4 (83-168)||(9795276-9795362)
chr4 (329-363)||(10104167-10104201)
chr4 (329-363)||(15675006-15675040)
chr4 (329-363)||(33241012-33241046)
chr4 (329-363)||(55376491-55376525)
chr4 (329-361)||(8045273-8045305)
chr4 (329-361)||(16523147-16523179)
chr4 (329-365)||(16609008-16609044)
chr4 (329-365)||(26680518-26680554)
chr4 (116-234)||(31115722-31115840)
chr4 (331-363)||(31132628-31132660)
[»] scaffold0155 (1 HSPs)
scaffold0155 (22-362)||(23664-24004)
[»] chr3 (39 HSPs)
chr3 (157-368)||(44229120-44229332)
chr3 (142-359)||(49232556-49232774)
chr3 (142-362)||(18911113-18911334)
chr3 (22-359)||(12264710-12265049)
chr3 (142-359)||(1467657-1467875)
chr3 (144-361)||(12902006-12902224)
chr3 (142-359)||(15468258-15468476)
chr3 (142-319)||(25058859-25059037)
chr3 (142-359)||(22275329-22275547)
chr3 (127-367)||(54651562-54651803)
chr3 (142-359)||(12811961-12812179)
chr3 (142-362)||(5228433-5228653)
chr3 (191-359)||(18896962-18897131)
chr3 (274-365)||(15615086-15615174)
chr3 (276-361)||(15938393-15938478)
chr3 (255-319)||(41270309-41270373)
chr3 (82-168)||(19946757-19946844)
chr3 (276-361)||(15936551-15936636)
chr3 (255-319)||(16821373-16821437)
chr3 (255-319)||(55316453-55316517)
chr3 (89-167)||(11477301-11477380)
chr3 (83-168)||(14285021-14285107)
chr3 (66-167)||(16934084-16934186)
chr3 (22-75)||(44228985-44229038)
chr3 (83-167)||(9303210-9303295)
chr3 (90-163)||(8268859-8268933)
chr3 (90-163)||(8275959-8276033)
chr3 (152-234)||(11986218-11986300)
chr3 (329-365)||(13839201-13839237)
chr3 (22-69)||(1467948-1467995)
chr3 (22-69)||(18897208-18897255)
chr3 (22-69)||(49232436-49232483)
chr3 (329-363)||(11986077-11986111)
chr3 (329-363)||(14285290-14285324)
chr3 (329-363)||(51961028-51961062)
chr3 (329-365)||(2449147-2449183)
chr3 (329-361)||(19947027-19947059)
chr3 (329-365)||(23492697-23492733)
chr3 (329-365)||(38168238-38168274)
[»] scaffold0467 (2 HSPs)
scaffold0467 (142-367)||(10249-10475)
scaffold0467 (22-69)||(10548-10595)
[»] scaffold0017 (1 HSPs)
scaffold0017 (157-368)||(54010-54221)
[»] chr8 (41 HSPs)
chr8 (142-362)||(13720843-13721064)
chr8 (142-359)||(22006176-22006394)
chr8 (142-359)||(271278-271496)
chr8 (142-359)||(644424-644642)
chr8 (142-359)||(830159-830377)
chr8 (142-362)||(16872966-16873187)
chr8 (142-362)||(13662180-13662401)
chr8 (142-359)||(22088712-22088930)
chr8 (142-359)||(15319077-15319295)
chr8 (142-359)||(15499446-15499664)
chr8 (142-367)||(16195351-16195577)
chr8 (192-319)||(21844526-21844654)
chr8 (255-319)||(21851919-21851983)
chr8 (159-362)||(24549120-24549319)
chr8 (159-319)||(6774212-6774371)
chr8 (83-167)||(22886387-22886471)
chr8 (256-319)||(16674346-16674409)
chr8 (255-310)||(30120956-30121011)
chr8 (66-167)||(3431391-3431493)
chr8 (83-163)||(22147498-22147579)
chr8 (82-168)||(2545005-2545092)
chr8 (329-361)||(16038785-16038817)
chr8 (22-69)||(271569-271616)
chr8 (22-69)||(644304-644351)
chr8 (22-69)||(830039-830086)
chr8 (22-69)||(13662474-13662521)
chr8 (22-69)||(15319368-15319415)
chr8 (22-69)||(15499737-15499784)
chr8 (22-69)||(22089003-22089050)
chr8 (66-163)||(18612449-18612547)
chr8 (66-163)||(18619354-18619452)
chr8 (22-75)||(16195230-16195283)
chr8 (46-127)||(21494600-21494681)
chr8 (22-75)||(22006461-22006514)
chr8 (329-361)||(2545266-2545298)
chr8 (329-361)||(3431175-3431207)
chr8 (329-365)||(5238405-5238441)
chr8 (329-365)||(22907123-22907159)
chr8 (329-365)||(24385647-24385683)
chr8 (329-365)||(24661157-24661193)
chr8 (329-365)||(43685864-43685900)
[»] scaffold0023 (4 HSPs)
scaffold0023 (142-362)||(153922-154143)
scaffold0023 (255-319)||(169866-169930)
scaffold0023 (254-319)||(36326-36391)
scaffold0023 (329-361)||(61121-61153)
[»] scaffold0107 (4 HSPs)
scaffold0107 (142-359)||(31429-31647)
scaffold0107 (142-310)||(39766-39935)
scaffold0107 (22-69)||(31309-31356)
scaffold0107 (22-69)||(39646-39693)
[»] scaffold0076 (3 HSPs)
scaffold0076 (142-359)||(39223-39441)
scaffold0076 (192-311)||(43167-43287)
scaffold0076 (22-69)||(39103-39150)
[»] scaffold1500 (1 HSPs)
scaffold1500 (142-362)||(1429-1650)
[»] scaffold0761 (2 HSPs)
scaffold0761 (142-362)||(1490-1711)
scaffold0761 (22-69)||(1784-1831)
[»] scaffold0012 (2 HSPs)
scaffold0012 (142-365)||(34070-34294)
scaffold0012 (22-69)||(34367-34414)
[»] scaffold0191 (1 HSPs)
scaffold0191 (22-359)||(7374-7712)
[»] scaffold0213 (1 HSPs)
scaffold0213 (142-359)||(29282-29500)
[»] scaffold0383 (2 HSPs)
scaffold0383 (142-362)||(2512-2734)
scaffold0383 (22-75)||(2392-2445)
[»] scaffold0066 (3 HSPs)
scaffold0066 (127-363)||(45135-45373)
scaffold0066 (22-363)||(54416-54759)
scaffold0066 (22-75)||(45011-45064)
[»] scaffold0892 (1 HSPs)
scaffold0892 (157-368)||(3549-3765)
[»] scaffold0369 (1 HSPs)
scaffold0369 (192-367)||(3892-4068)
[»] scaffold0529 (1 HSPs)
scaffold0529 (116-319)||(3056-3260)
[»] scaffold0516 (1 HSPs)
scaffold0516 (255-368)||(12036-12149)
[»] scaffold1666 (2 HSPs)
scaffold1666 (142-243)||(31-132)
scaffold1666 (22-69)||(205-252)
[»] scaffold0215 (2 HSPs)
scaffold0215 (159-368)||(9257-9462)
scaffold0215 (159-368)||(16155-16360)
[»] scaffold0022 (1 HSPs)
scaffold0022 (192-319)||(5170-5298)
[»] scaffold0026 (2 HSPs)
scaffold0026 (255-319)||(64477-64541)
scaffold0026 (276-361)||(108001-108086)
[»] scaffold0116 (1 HSPs)
scaffold0116 (192-309)||(205-323)
[»] scaffold0162 (2 HSPs)
scaffold0162 (66-168)||(11788-11890)
scaffold0162 (329-365)||(26335-26371)
[»] scaffold0139 (2 HSPs)
scaffold0139 (253-319)||(21070-21136)
scaffold0139 (275-319)||(14016-14060)
[»] scaffold0092 (1 HSPs)
scaffold0092 (253-359)||(10666-10772)
[»] scaffold0008 (1 HSPs)
scaffold0008 (254-319)||(31629-31694)
[»] scaffold1711 (1 HSPs)
scaffold1711 (255-319)||(1258-1322)
[»] scaffold0207 (2 HSPs)
scaffold0207 (89-168)||(17764-17844)
scaffold0207 (329-363)||(18027-18061)
[»] scaffold0084 (1 HSPs)
scaffold0084 (127-234)||(56151-56258)
[»] scaffold0029 (1 HSPs)
scaffold0029 (83-168)||(49957-50043)
[»] scaffold0420 (1 HSPs)
scaffold0420 (159-311)||(13287-13438)
[»] scaffold0118 (2 HSPs)
scaffold0118 (84-168)||(34522-34607)
scaffold0118 (329-363)||(34305-34339)
[»] scaffold0173 (2 HSPs)
scaffold0173 (66-163)||(5264-5362)
scaffold0173 (329-361)||(5550-5582)
[»] scaffold0335 (2 HSPs)
scaffold0335 (83-163)||(5695-5776)
scaffold0335 (329-361)||(5475-5507)
[»] scaffold0032 (3 HSPs)
scaffold0032 (284-361)||(13266-13342)
scaffold0032 (83-166)||(13395-13479)
scaffold0032 (329-365)||(108070-108106)
[»] scaffold0028 (1 HSPs)
scaffold0028 (83-167)||(130616-130701)
[»] scaffold0001 (1 HSPs)
scaffold0001 (83-163)||(165080-165161)
[»] scaffold0025 (1 HSPs)
scaffold0025 (116-234)||(8942-9060)
[»] scaffold0132 (2 HSPs)
scaffold0132 (142-234)||(13626-13717)
scaffold0132 (329-363)||(13825-13859)
[»] scaffold0615 (1 HSPs)
scaffold0615 (89-167)||(6326-6405)
[»] scaffold0125 (2 HSPs)
scaffold0125 (159-234)||(41786-41859)
scaffold0125 (329-361)||(41966-41998)
[»] scaffold0160 (1 HSPs)
scaffold0160 (329-363)||(339-373)
[»] scaffold0158 (1 HSPs)
scaffold0158 (329-363)||(25532-25566)
[»] scaffold0367 (1 HSPs)
scaffold0367 (329-362)||(17207-17240)
[»] scaffold0361 (1 HSPs)
scaffold0361 (157-234)||(3324-3401)
[»] scaffold0597 (1 HSPs)
scaffold0597 (329-365)||(873-909)
[»] scaffold0465 (1 HSPs)
scaffold0465 (329-365)||(9877-9913)
[»] scaffold0413 (1 HSPs)
scaffold0413 (323-363)||(5987-6027)
[»] scaffold0141 (2 HSPs)
scaffold0141 (329-365)||(22858-22894)
scaffold0141 (329-365)||(27113-27149)
[»] scaffold0124 (1 HSPs)
scaffold0124 (329-365)||(1491-1527)
[»] scaffold0078 (1 HSPs)
scaffold0078 (329-365)||(36975-37011)


Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 22 - 368
Target Start/End: Complemental strand, 10000625 - 10000279
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10000625 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 10000526  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10000525 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 10000426  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |    
T  10000425 tcatcaattcatgtataagaaacaacaacataacaagagcacgaatttgacataaattgttcatcaacccatttttatacaacatgagaagatgcaaaat 10000326  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttagatgatgt 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10000325 ttgaaattgattatgatgaagacaaacccccttaccttagatgatgt 10000279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 22 - 368
Target Start/End: Original strand, 16418498 - 16418844
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16418498 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacatggtttgtcaacaacaacatccattgaaacttgtttctcacctcaat 16418597  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16418598 tcaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 16418697  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  16418698 tcatcaattcatgtataagcaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 16418797  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttagatgatgt 368  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16418798 ttgaaattgattatgatgaaaacaaacccccttaccttagatgatgt 16418844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 15760250 - 15760029
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||| | |||     
T  15760250 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacatatcataatcatcaattcatgcacaaga 15760151  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||||||    
T  15760150 aaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatga 15760051  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  15760050 taactaacccccttaccttaga 15760029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 15950927 - 15950709
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  15950927 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 15950828  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  15950827 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 15950728  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  15950727 taactaacccccttacctt 15950709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 14251034 - 14250813
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||     
T  14251034 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaaaaacataccataatcatcaattcatgcacaaga 14250935  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| ||||  | ||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||| |||||||   ||||  |||||| |||||    
T  14250934 aaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaaatgaacatgattacgatga 14250835  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  14250834 taactaacccccttaccttaga 14250813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 18980157 - 18979936
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  18980157 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 18980058  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  18980057 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 18979958  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  18979957 taactaacccccttaccttaga 18979936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 7822848 - 7823066
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  7822848 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 7822947  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  7822948 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 7823047  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  7823048 taactaacccccttacctt 7823066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 7830159 - 7830377
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  7830159 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 7830258  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  7830259 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 7830358  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  7830359 taactaacccccttacctt 7830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 27101773 - 27101555
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  27101773 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 27101674  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  27101673 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 27101574  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  27101573 taactaacccccttacctt 27101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 27109121 - 27108903
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  27109121 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 27109022  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  27109021 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 27108922  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  27108921 taactaacccccttacctt 27108903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 27176553 - 27176771
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  27176553 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 27176652  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  27176653 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 27176752  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  27176753 taactaacccccttacctt 27176771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 38783865 - 38783647
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  38783865 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 38783766  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  38783765 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 38783666  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  38783665 taactaacccccttacctt 38783647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 13758490 - 13758711
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  13758490 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 13758589  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  13758590 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 13758689  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  13758690 taactaacccccttaccttaga 13758711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 15927688 - 15927909
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||| | |||     
T  15927688 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaagcataccataatcatcaattcatgcacaaga 15927787  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   ||||| ||||||| |||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  15927788 aaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 15927887  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  15927888 taactaacccccttaccttaga 15927909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 157 - 368
Target Start/End: Complemental strand, 48622786 - 48622575
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataac 255  Q
    ||||||||||||| ||| |||| ||| | |||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||  | || || |      
T  48622786 aatttcacaacttaacaattatgcatgctttgaac-atgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagt 48622688  T
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccctta 355  Q
    ||||||||||||||  | | |||||||||||||||||||||| || |||||||||| |||||||  ||  |||||||||||||||| |||||||||||||    
T  48622687 aagagcacgaatttagcatcaattgttcatcaacccattttcgtaaaacatgagaaaatgcaaaaatttgaattgattatgatgaaaacaaaccccctta 48622588  T
Q  356 ccttagatgatgt 368  Q
    |||||||||||||    
T  48622587 ccttagatgatgt 48622575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 13321107 - 13321227
Alignment:
Q  116 ctcaattcaaca--caacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    ||||||||||||  ||||||| || || ||| ||||| |||| ||||||| |||||||||||||||||||| ||||| |||||||||||| | |||| ||    
T  13321107 ctcaattcaacaatcaacttagcaaaattcaccaattgagcacaatttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatca 13321206  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  13321207 tacaattatcatcaattcatg 13321227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 13572910 - 13572974
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  13572910 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 13572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 359
Target Start/End: Complemental strand, 16478979 - 16478879
Alignment:
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccctta 355  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||||| ||   || |||||||||| |  || ||||||||||    
T  16478979 aagagcacgaatctaacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---aaatgattatgataatcactaaccccctta 16478883  T
Q  356 cctt 359  Q
    ||||    
T  16478882 cctt 16478879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 18253844 - 18253759
Alignment:
Q  276 aattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||| ||||  || ||||||||||||||||    
T  18253844 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 18253759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 13911106 - 13910978
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    |||||||||||| | |||| ||||| || | |||||||||||| |||  || | | || || |||||||||||||||||  | ||||||||||||||||     
T  13911106 catgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaact 13911007  T
Q  291 cattttcatacaacatgagaagatgcaaa 319  Q
    ||||||||||||||||||||| |||||||    
T  13911006 cattttcatacaacatgagaatatgcaaa 13910978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 10989643 - 10989707
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | ||| |||||||||||||||||||||||||||||||||| |||||||    
T  10989643 caagagcacgaatttagcatgatttgttcatcaacccattttcatacaacatgagaatatgcaaa 10989707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 371132 - 371234
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcac 164  Q
    |||||||||||| | | ||||| ||||||| || |||||||| ||||||||| |||||||| ||||| | ||| || |||||||||||||| ||||||||    
T  371132 acaacaacatgtctcggcaacaacaacatcaatcgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcac 371231  T
Q  165 aac 167  Q
    |||    
T  371232 aac 371234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 15862174 - 15862259
Alignment:
Q  276 aattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||  |  |||||||||| |  || ||||||||||||||||    
T  15862174 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttaccttag 15862259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 2437689 - 2437755
Alignment:
Q  253 aacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||  |  ||||||||||| | ||||||||||||||||||||||| |||||||    
T  2437689 aacaagagcacgaatttagcaagaattgttcattatcccattttcatacaacatgagaaaatgcaaa 2437755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 15760370 - 15760317
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||||| |||||||||||||||| | || |||||||||||| |||||    
T  15760370 catcatcaatccacaattaagtatacccaattcattattcactcacaataacat 15760317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 7822728 - 7822775
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  7822728 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 7822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 7830039 - 7830086
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  7830039 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 7830086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 27101893 - 27101846
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  27101893 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 27101846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 27109241 - 27109194
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  27109241 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 27109194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 27176433 - 27176480
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  27176433 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 27176480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 38783985 - 38783938
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  38783985 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 38783938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 13321335 - 13321369
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  13321335 tgattatgatgaagactaacccccttaccttagat 13321369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 15852456 - 15852494
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataatt 60  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  15852456 catcatcaatccataattatgtatacccaagtcataatt 15852494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 25124451 - 25124485
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  25124451 tgattatgatgaagactaacccccttaccttagat 25124485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 47480975 - 47480941
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  47480975 tgattatgatgaagactaacccccttaccttagat 47480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 371418 - 371450
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  371418 tgattatgatgaagactaacccccttaccttag 371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 7293334 - 7293370
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  7293334 tgattatgataaagactaacccccttaccttagatga 7293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 11516545 - 11516581
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  11516545 tgattatgataaagactaacccccttaccttagatga 11516581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 14113934 - 14113898
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  14113934 tgattatgataaagactaacccccttaccttagatga 14113898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 15441509 - 15441473
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  15441509 tgattatgataaagactaacccccttaccttagatga 15441473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 16212072 - 16212108
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  16212072 tgattatgataaagactaacccccttaccttagatga 16212108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 30262074 - 30262038
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  30262074 tgattatgataaagactaacccccttaccttagatga 30262038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 22 - 368
Target Start/End: Original strand, 7210 - 7556
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  7210 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacatggtttgtcaacaacaacatccattgaaacttgtttctcacctcaat 7309  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7310 tcaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 7409  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  7410 tcatcaattcatgtataagcaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 7509  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttagatgatgt 368  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7510 ttgaaattgattatgatgaaaacaaacccccttaccttagatgatgt 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 22 - 368
Target Start/End: Complemental strand, 5888885 - 5888539
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  5888885 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacatggtttgtcaacaacaacatccattgaaacttgtttctcacctcaat 5888786  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5888785 tcaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 5888686  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  5888685 tcatcaattcatgtataagcaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 5888586  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttagatgatgt 368  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  5888585 ttgaaattgattatgatgaaaacaaacccccttaccttagatgatgt 5888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 23774137 - 23774477
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23774137 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 23774236  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
     ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23774237 ccaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 23774336  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |    
T  23774337 tcatcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaat 23774436  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||| ||||||||||| |  || |||||||||||||||||    
T  23774437 ttgaacttgattatgataataactaacccccttaccttaga 23774477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 157 - 368
Target Start/End: Original strand, 21142030 - 21142242
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataac 255  Q
    ||||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| | ||| ||| |||| || |||    
T  21142030 aatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacaac 21142129  T
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaa-catgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccctt 354  Q
    |||||||||||||| || | |||||||||||||||||||||||||||| |||||||| ||| ||| |||  |||||||||||||||| ||||||||||||    
T  21142130 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaa-atgaaaatttttgaattgattatgatgaaaacaaaccccctt 21142228  T
Q  355 accttagatgatgt 368  Q
    ||||||||||||||    
T  21142229 accttagatgatgt 21142242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 142 - 361
Target Start/End: Complemental strand, 23778181 - 23777961
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||     
T  23778181 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcatcaattcatgcataaga 23778082  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||||||    
T  23778081 aaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatga 23777982  T
Q  341 agacaaacccccttaccttag 361  Q
      || |||||| |||||||||    
T  23777981 taactaacccctttaccttag 23777961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 8943966 - 8944187
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||| | |||     
T  8943966 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaatataccataatcatcaattcatgcacaaga 8944065  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  8944066 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 8944165  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  8944166 taactaacccccttaccttaga 8944187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 12728512 - 12728733
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  12728512 tcatcaattaagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 12728611  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  12728612 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 12728711  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  12728712 taactaacccccttaccttaga 12728733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 34824595 - 34824816
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  34824595 tcatcaattaagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 34824694  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  34824695 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 34824794  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  34824795 tcactaacccccttaccttaga 34824816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 142 - 365
Target Start/End: Complemental strand, 12641778 - 12641554
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  12641778 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcagccacaaacataccataatcatcaattcatgcacaaga 12641679  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  12641678 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 12641579  T
Q  341 agacaaacccccttaccttagatga 365  Q
      || ||||||||||||||||||||    
T  12641578 taactaacccccttaccttagatga 12641554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 11231474 - 11231256
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  11231474 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 11231375  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  11231374 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 11231275  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  11231274 taactaacccccttacctt 11231256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 22513321 - 22513103
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  22513321 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 22513222  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  22513221 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 22513122  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  22513121 taactaacccccttacctt 22513103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 24685917 - 24685699
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  24685917 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 24685818  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  24685817 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 24685718  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  24685717 taactaacccccttacctt 24685699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 28775943 - 28775725
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  28775943 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 28775844  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  28775843 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 28775744  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  28775743 taactaacccccttacctt 28775725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 12636004 - 12635783
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  12636004 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 12635905  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   ||||||||||||||| |||||||||||||||||| | |||||||  ||| |  |||||||||| |    
T  12635904 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcatacaacatgaggaaatgcaaaaattgtacatgattatgataa 12635805  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  12635804 taactaacccccttaccttaga 12635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 42178105 - 42177884
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||     
T  42178105 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaaaaacataccataatcatcaattcatgcacaaga 42178006  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| ||||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  42178005 aaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 42177906  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  42177905 taactaacccccttaccttaga 42177884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 3798739 - 3798518
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  3798739 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 3798640  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||  |  |||||||||| |    
T  3798639 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataa 3798540  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  3798539 taactaacccccttaccttaga 3798518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 16935713 - 16935934
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||| ||| | ||||||| ||||| |||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||| | |||     
T  16935713 tcatcaataaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccataatcatcaattcatgcacaaga 16935812  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||| |||||| ||   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  16935813 aaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 16935912  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  16935913 taactaacccccttaccttaga 16935934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 17006373 - 17006594
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||| ||| | ||||||| ||||| |||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||| | |||     
T  17006373 tcatcaataaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccataatcatcaattcatgcacaaga 17006472  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||| |||||| ||   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  17006473 aaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 17006572  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  17006573 taactaacccccttaccttaga 17006594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 15633273 - 15633359
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||||    
T  15633273 caacaacaacatcaattgaaacttgtttctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaact 15633359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 28031434 - 28031348
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||| ||||| ||||| || |||||||||||||| ||||||||||||    
T  28031434 caacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacatatcataattcatcaattaagcataatttcacaact 28031348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 19886679 - 19886615
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  19886679 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 19886615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 17204391 - 17204476
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||||||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  17204391 caacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 17204476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 24826914 - 24826829
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||||||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  24826914 caacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 24826829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 21141895 - 21141948
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||||||||||| ||||||||||||  |||||||| |||||||||||    
T  21141895 catcatcaatccataattatgtatacccaagtcgtaattcacccacaacaacat 21141948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 25213108 - 25213193
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  25213108 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 25213193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24341559 - 24341441
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| |||| ||||| |||||||| |||||| |||||| ||||||| || |||||||| | |||| ||    
T  24341559 ctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacata-attgaac-atataatttcaccaacaatca 24341462  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  24341461 tacaattatcatcaattcatg 24341441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 11231594 - 11231547
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  11231594 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 11231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 12728392 - 12728439
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  12728392 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 12728439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 16935593 - 16935640
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  16935593 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 16935640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 17006253 - 17006300
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  17006253 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 17006300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 22513441 - 22513394
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  22513441 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 22513394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 23778301 - 23778254
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  23778301 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 23778254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 25265515 - 25265442
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||||| || ||||||||||||||    
T  25265515 tttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatg 25265442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 28776063 - 28776016
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  28776063 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 28776016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 34824475 - 34824522
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  34824475 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 34824522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 7507938 - 7507860
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataacaagagcacgaattt 269  Q
    |||||||||||| | |||| ||||| || |||||||||||||| | ||| ||| |||| || |||||||||||||||||    
T  7507938 catgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaattt 7507860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 24341340 - 24341306
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  24341340 tgattatgatgaagactaacccccttaccttagat 24341306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 7507788 - 7507756
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  7507788 tgattatgatgaagactaacccccttaccttag 7507756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 9652827 - 9652791
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  9652827 tgattatgataaagactaacccccttaccttagatga 9652791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 14906385 - 14906349
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  14906385 tgattatgataaagactaacccccttaccttagatga 14906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 23820389 - 23820425
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  23820389 tgattatgataaagactaacccccttaccttagatga 23820425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 28031165 - 28031133
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  28031165 tgattatgatgaagactaacccccttaccttag 28031133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 33128373 - 33128405
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  33128373 tgattatgatgaagactaacccccttaccttag 33128405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 6598 - 6938
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  6598 catcatcaatccacaattaagtatacccaagttataattcactcacaacaacatgttttgtcaacaataacatccattgaaacttgtttctcacctcaat 6697  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6698 ccaacacaacttatcacaaatcattaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 6797  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  6798 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 6897  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||||| |  || |||||||||||||||||    
T  6898 ttgaaattgattatgataataactaacccccttaccttaga 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 22035448 - 22035788
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22035448 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 22035547  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
     ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22035548 ccaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 22035647  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  22035648 tcatcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 22035747  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||||| |  || |||||||||||||||||    
T  22035748 ttgaaattgattatgataataactaacccccttaccttaga 22035788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 7641189 - 7640849
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7641189 catcatcaatccataattaagtacacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 7641090  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7641089 tcaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 7640990  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |    
T  7640989 tcatcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaat 7640890  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||||| |  || |||||||||||||||||    
T  7640889 ttgaaattgattatgataataactaacccccttaccttaga 7640849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 18059894 - 18059676
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||     
T  18059894 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcatgcacaaga 18059795  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||| |||||||| ||  |  |||||||||| |    
T  18059794 aaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattatacatgattatgataa 18059695  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  18059694 taactaacccccttacctt 18059676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 17004758 - 17004976
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  17004758 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 17004857  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  17004858 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 17004957  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  17004958 taactaacccccttacctt 17004976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 319
Target Start/End: Original strand, 17148687 - 17148865
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  17148687 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 17148786  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||    
T  17148787 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 17148865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 38055227 - 38055009
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  38055227 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 38055128  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | || || |  || ||||||||||| ||   ||||||||| ||||||||||||||||||||||||||||||||||| ||| |  |||||||||| |    
T  38055127 aaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaagatgcaaagattgtacatgattatgataa 38055028  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  38055027 taactaacccccttacctt 38055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 46523509 - 46523729
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||| ||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||||||| ||||| |||||||||||| | |||     
T  46523509 tcatcaatgaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataacataaacatcaattcatgcacaaga 46523608  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  | |||  |||||||||| |    
T  46523609 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa-atggaacatgattatgataa 46523707  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  46523708 taactaacccccttaccttaga 46523729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 20254312 - 20254454
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| |   ||||| ||||||| ||| ||||||| |||||||||||||    
T  20254312 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaat 20254411  T
Q  122 tcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    ||||| ||||| | |||||| |||||||||||||| |||||||    
T  20254412 tcaacaacaacatgtcacaattcatcaattaagcataatttca 20254454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 359
Target Start/End: Complemental strand, 19962617 - 19962417
Alignment:
Q  160 ttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaag 258  Q
    |||| ||||| |||||||||||||| ||||| ||||||||| || ||| ||||||||||||||||||||||||   | ||||||  ||||  | | ||||    
T  19962617 ttcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaaacacaagaaaatagcattacagcaag 19962518  T
Q  259 agcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacct 358  Q
    ||||||||||| ||   |||||| ||||||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |  || |||||||||||||    
T  19962517 agcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacct 19962418  T
Q  359 t 359  Q
    |    
T  19962417 t 19962417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 359
Target Start/End: Original strand, 22227978 - 22228146
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    ||||||||||||   |||| ||||| || |||||||||||||| | ||||||  | || || | |||||||||||||||  |  ||||||||||||||||    
T  22227978 catgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacc 22228077  T
Q  291 cattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
    ||||||||||||||||||||| |||||||  ||| |  |||||||||| |  || ||||||||||||||    
T  22228078 cattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 359
Target Start/End: Original strand, 22232675 - 22232843
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    ||||||||||||   |||| ||||| || |||||||||||||| | ||||||  | || || | |||||||||||||||  |  ||||||||||||||||    
T  22232675 catgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacc 22232774  T
Q  291 cattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
    ||||||||||||||||||||| |||||||  ||| |  |||||||||| |  || ||||||||||||||    
T  22232775 cattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 45051675 - 45051763
Alignment:
Q  274 tgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |    |  |||||||||| ||||| ||||||||||||||| ||||    
T  45051675 tgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat---cacatgattatgataaagactaacccccttaccttaaatga 45051763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 21650252 - 21650150
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcac 164  Q
    |||||||||||| |   ||||| ||||||| ||||||||||| ||||||||| |||||||| ||||| | ||| || |||||||||||||| ||||||||    
T  21650252 acaacaacatgtctcaacaacaacaacatcaattgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcac 21650153  T
Q  165 aac 167  Q
    |||    
T  21650152 aac 21650150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 5072406 - 5072342
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||| |||| | |||||||    
T  5072406 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacttgagtaaatgcaaa 5072342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 18601136 - 18601072
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||| ||||||  | |||||||||||||||||||||||||||||||||||| | |||||||    
T  18601136 caagagcatgaatttagcatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 18601072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 2116507 - 2116552
Alignment:
Q  274 tgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  2116507 tgaattgttcatcaacccatttttatacaacatgagaaaatgcaaa 2116552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 46523394 - 46523438
Alignment:
Q  27 tcaatccataattaagtatacccaagttataattcactcacaaca 71  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  46523394 tcaatccataattaagtatacccaagtcatgattcactcacaaca 46523438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 17004638 - 17004685
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  17004638 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 17004685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 18060014 - 18059967
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  18060014 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 18059967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 38055347 - 38055300
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  38055347 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 38055300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 20893582 - 20893550
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  20893582 tgattatgatgaagactaacccccttaccttag 20893550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 29870031 - 29869691
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29870031 catcatcaatccatcattaagtacacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 29869932  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29869931 tcaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacacttatacatacattgaaccatgtaatttcatccacaaacataccataa 29869832  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  29869831 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 29869732  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    || |||||||||||||| |  || |||||||||||||||||    
T  29869731 tttaaattgattatgataataactaacccccttaccttaga 29869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 1556125 - 1556346
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  1556125 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 1556224  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||||||    
T  1556225 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatga 1556324  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  1556325 taactaacccccttaccttaga 1556346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 142 - 361
Target Start/End: Complemental strand, 13620930 - 13620710
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||| | |||     
T  13620930 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgcaatttcacccacaaacataccataatcatcaattcatgcacaaga 13620831  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| ||||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  ||||||||| ||    
T  13620830 aaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgaaga 13620731  T
Q  341 agacaaacccccttaccttag 361  Q
    |||| ||||||||||||||||    
T  13620730 agactaacccccttaccttag 13620710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 16232012 - 16232233
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  16232012 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 16232111  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  16232112 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 16232211  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  16232212 taactaacccccttaccttaga 16232233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 10488819 - 10489037
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  10488819 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 10488918  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  10488919 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 10489018  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  10489019 taactaacccccttacctt 10489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 16376509 - 16376291
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  16376509 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 16376410  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  16376409 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 16376310  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  16376309 taactaacccccttacctt 16376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 16383833 - 16383615
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  16383833 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 16383734  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  16383733 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 16383634  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  16383633 taactaacccccttacctt 16383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 319
Target Start/End: Complemental strand, 18086959 - 18086781
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  18086959 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 18086860  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||| |||| || |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||    
T  18086859 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 18086781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 22225874 - 22225656
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||     
T  22225874 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcatgcacaaga 22225775  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |  |||||||||||||| ||   |||||||||||||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  22225774 aaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 22225675  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||| ||||||    
T  22225674 taactaacccccatacctt 22225656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 16556275 - 16556057
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  16556275 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 16556176  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | || |||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  16556175 aaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 16556076  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  16556075 taactaacccccttacctt 16556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 16632831 - 16632613
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  16632831 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 16632732  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | || |||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  16632731 aaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 16632632  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  16632631 taactaacccccttacctt 16632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 23977889 - 23978110
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  23977889 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 23977988  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  23977989 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 23978088  T
Q  341 agacaaacccccttaccttaga 362  Q
      || ||| |||||||||||||    
T  23978089 taactaacgcccttaccttaga 23978110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 19610018 - 19610359
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |||   ||  ||| | ||||||| || |||  |    |  || |||| |    
T  19610018 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaacta-catctcatt 19610116  T
Q  122 tcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||| || ||| ||||| |  |||||||| ||| | ||||| | ||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  19610117 tcaatcaaaacatatcaaatttcatcaatgaagtataattttataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 19610216  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    | |||| ||||||| | ||| ||| |||| || | |||||||||||||||  |   ||||||||||||||||||||||||||||||| |||| |||||||    
T  19610217 accatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatcagaaaatgcaaa 19610316  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
      ||| |  |||||||||| |  || |||||||||||||||||    
T  19610317 aattgtacatgattatgataataactaacccccttaccttaga 19610359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 359
Target Start/End: Original strand, 19299375 - 19299575
Alignment:
Q  160 ttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaag 258  Q
    |||| ||||| |||||||||||||| ||||| ||||||||| || ||| ||||||||||||||||||||||||   | ||||||  ||||  | | ||||    
T  19299375 ttcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaaacacaagaaaatagcattacagcaag 19299474  T
Q  259 agcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacct 358  Q
    ||||||||||| ||   |||||| ||||||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |  || |||||||||||||    
T  19299475 agcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccttacct 19299574  T
Q  359 t 359  Q
    |    
T  19299575 t 19299575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 196 - 359
Target Start/End: Complemental strand, 22251648 - 22251484
Alignment:
Q  196 taatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccatt 294  Q
    |||||||| ||| |||||||||||||||||||||||||| | ||||||  |||| || | ||||||||||||||| ||   |||||||||||||||||||    
T  22251648 taatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccatt 22251549  T
Q  295 ttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
    ||||||||||||||||| |||||||| ||| |  |||||||||| |  || ||||||| ||||||    
T  22251548 ttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaacccccatacctt 22251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 127 - 355
Target Start/End: Original strand, 29665978 - 29666208
Alignment:
Q  127 acaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatc 226  Q
    |||||||| || || ||| ||||| || | ||||||| |||||||||||||| ||||| ||||| |||||||||||| |||||| ||||| || ||||||    
T  29665978 acaacttagcaaaattcaccaattgagtacaatttcataacttgacatttatgcatactttgaaacatgtaatttcacccacaatcatacaattatcatc 29666077  T
Q  227 aattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaac-atgagaagatgcaaagtttg 324  Q
    |||||||  ||||| ||| | || || | | ||||||||||||| ||   |||| | ||||| |||||||||||||||| |||||||  |||||   |||    
T  29666078 aattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcaccccattttcatacaacaatgagaaattgcaataattg 29666177  T
Q  325 aaattgattatgatgaagacaaaccccctta 355  Q
    ||  |||||||||||||||| ||||| ||||    
T  29666178 aacatgattatgatgaagactaacccactta 29666208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 365
Target Start/End: Complemental strand, 1650187 - 1650016
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaaacagcaacataaca---agagcacgaatttgacgtgaattgttcatcaa 288  Q
    |||||||||||| | |||| ||||| || |||||||||||||| |||  |||| | ||||| |||   ||||||||||| |  | |||||||||||||||    
T  1650187 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatac-aaac-gtaacatcacagtaagagcacgaatctagcatgaattgttcatcaa 1650090  T
Q  289 cccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttagatga 365  Q
    ||||||||||||||||||||||| ||||||| ||   |  |||||||||| ||||| ||||||||||||||| ||||    
T  1650089 cccattttcatacaacatgagaaaatgcaaaatt---acatgattatgataaagactaacccccttaccttaaatga 1650016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 16825770 - 16825706
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  16825770 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 16825706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 32276959 - 32276873
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||| | ||| | |||||| |||||||||||||| ||||||||||||    
T  32276959 caacaacaacatcaattgaaacttgattctcacctcaattcaacaataacatgtcacaattcatcaattaagcataatttcacaact 32276873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 25175797 - 25175853
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaa 311  Q
    |||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||    
T  25175797 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaa 25175853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 27654001 - 27653937
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | ||| ||||||||||| |||||||||||||||||||||| |||||||    
T  27654001 caagagcacgaatttagcatgatttgttcatcaatccattttcatacaacatgagaaaatgcaaa 27653937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 19629373 - 19629471
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||||||||| |   ||||| ||||||| ||| || |||| |||||||||||||||||| ||||| | |||||| |||||||||||||| |||||||    
T  19629373 acaacaacatgtctcagcaacaacaacatcaattaaatcttgattctcacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttca 19629471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 1556005 - 1556058
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||| |||||    
T  1556005 catcatcaatccacaattaagtatacccaattcataattcactcacaataacat 1556058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 16300176 - 16300091
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||| |||||| | ||| || | |||||||| ||| |||||||||||    
T  16300176 caacaacaacatcaattgaaacttgattctcacctcaattcaaccacaacatgtcataatttatcaattaggcataatttcacaac 16300091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 27740931 - 27741019
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttca 203  Q
    |||||||||||| | ||||| || || ||| ||||| |||| ||||||| |||||||||||||||||||| | ||| ||||||||||||    
T  27740931 ctcaattcaacaacgacttagcaaaattcaccaattgagcacaatttcataacttgacatttatacatacttcgaaacatgtaatttca 27741019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 18823584 - 18823498
Alignment:
Q  82 tcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    |||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| || ||||||||    
T  18823584 tcaacaacaacatcaattgaaacttgattcacaccgcaattcaacaacaacatgtcataagtcatcaattaagcataacttcacaac 18823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 18839439 - 18839353
Alignment:
Q  82 tcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    |||||| ||||||| ||||||||||| ||| |||| ||||||||| | ||| | ||| || |||||||||||||| |||||||||||    
T  18839439 tcaacaacaacatcaattgaaacttgattcacaccccaattcaacaataacatgtcataagtcatcaattaagcataatttcacaac 18839353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 4991132 - 4991217
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||  |||||||||| |||| | ||| || |||||||||||||| |||||||||||    
T  4991132 caacaacaacatcaattgaaacttgattcacacaccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 4991217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 10488699 - 10488746
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  10488699 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 10488746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 16376629 - 16376582
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  16376629 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 16376582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 16383953 - 16383906
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  16383953 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 16383906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 16556395 - 16556348
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  16556395 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 16556348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 16632951 - 16632904
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  16632951 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 16632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 22225994 - 22225947
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  22225994 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 22225947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 27751743 - 27751777
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  27751743 tgattatgatgaagactaacccccttaccttagat 27751777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 32276690 - 32276656
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  32276690 tgattatgatgaagactaacccccttaccttagat 32276656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 1657692 - 1657659
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttaga 362  Q
    |||||||||||||||| |||||||||||||||||    
T  1657692 tgattatgatgaagactaacccccttaccttaga 1657659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 15862790 - 15862823
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttaga 362  Q
    |||||||||||||||| |||||||||||||||||    
T  15862790 tgattatgatgaagactaacccccttaccttaga 15862823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 15862592 - 15862682
Alignment:
Q  143 catcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    |||||||| |||| ||||| || ||||| ||||||||||||| ||||||| |||| |||||| | |||| ||||| || ||||||||||||||    
T  15862592 catcaattgagcacaattttcataacttcacatttatacata-attgaac-atgtgatttcaccaacaatcatacaattatcatcaattcatg 15862682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 18823314 - 18823282
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  18823314 tgattatgatgaagactaacccccttaccttag 18823282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 18839169 - 18839137
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  18839169 tgattatgatgaagactaacccccttaccttag 18839137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 23148304 - 23148336
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  23148304 tgattatgatgaagactaacccccttaccttag 23148336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 23153755 - 23153787
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  23153755 tgattatgatgaagactaacccccttaccttag 23153787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 23328558 - 23328898
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23328558 catcatcaatccacaattaagtatacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 23328657  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
     ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23328658 ccaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 23328757  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |    
T  23328758 tcatcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaat 23328857  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||||| |  || |||||||||||||||||    
T  23328858 ttgaaattgattatgataataactaacccccttaccttaga 23328898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 24 - 362
Target Start/End: Original strand, 24616165 - 24616502
Alignment:
Q  24 tcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattc 123  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |    
T  24616165 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacatgttt-gtcaacaacaacatccattgaaacttgtttctcacctcaatcc 24616263  T
Q  124 aacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatc 223  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24616264 aacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatt 24616363  T
Q  224 atcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagttt 323  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  24616364 atcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaattt 24616463  T
Q  324 gaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||| |  || |||||||||||||||||    
T  24616464 gaaattgattatgataataactaacccccttaccttaga 24616502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 24 - 362
Target Start/End: Original strand, 24712541 - 24712878
Alignment:
Q  24 tcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattc 123  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |    
T  24712541 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacatgttt-gtcaacaacaacatccattgaaacttgtttctcacctcaatcc 24712639  T
Q  124 aacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatc 223  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24712640 aacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatt 24712739  T
Q  224 atcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagttt 323  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  24712740 atcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaattt 24712839  T
Q  324 gaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||| |  || |||||||||||||||||    
T  24712840 gaaattgattatgataataactaacccccttaccttaga 24712878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 24 - 362
Target Start/End: Original strand, 24745559 - 24745896
Alignment:
Q  24 tcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattc 123  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |    
T  24745559 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacatgttt-gtcaacaacaacatccattgaaacttgtttctcacctcaatcc 24745657  T
Q  124 aacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatc 223  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24745658 aacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatt 24745757  T
Q  224 atcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagttt 323  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  24745758 atcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaattt 24745857  T
Q  324 gaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||| |  || |||||||||||||||||    
T  24745858 gaaattgattatgataataactaacccccttaccttaga 24745896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 23514681 - 23514902
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  23514681 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 23514780  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||||||    
T  23514781 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatga 23514880  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  23514881 taactaacccccttaccttaga 23514902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 1219656 - 1219435
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||| | |||     
T  1219656 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattaatgcacaaga 1219557  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  1219556 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 1219457  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  1219456 tcactaacccccttaccttaga 1219435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 319
Target Start/End: Complemental strand, 10778106 - 10777928
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  10778106 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 10778007  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||    
T  10778006 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 10777928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 21932517 - 21932299
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  21932517 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 21932418  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  21932417 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 21932318  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  21932317 taactaacccccttacctt 21932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 21938687 - 21938469
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  21938687 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 21938588  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  21938587 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 21938488  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  21938487 taactaacccccttacctt 21938469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 35582156 - 35582374
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  35582156 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 35582255  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  35582256 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 35582355  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  35582356 taactaacccccttacctt 35582374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 22 - 359
Target Start/End: Complemental strand, 11212321 - 11211983
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||   ||   | || |||||| || || ||| ||  || || |||| |    
T  11212321 catcatcaatccataattatgtatacccaagtcataatccacccacaacaacatcagttaatagcaacaacat-caatggaacatgaatcacatctcatt 11212223  T
Q  122 tcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    ||||| ||||| ||| | || |||  | || || | ||||||| ||||| ||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  11212222 tcaacaacaacatattaaaattcactacttgagtataatttcataacttaacatttatacacactttgaaacatgtaatttcacccacaaacataccata 11212123  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||| | ||| ||| |||| || | |||||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||||||    
T  11212122 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 11212023  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
      |||||  |||||||||| |  || ||||||||||||||    
T  11212022 aattgaacatgattatgataataactaacccccttacctt 11211983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 35791355 - 35791013
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | |||||||||   ||   | || ||||||| || ||| | ||  || || |||| |    
T  35791355 catcatcaatccataattatgtatacccaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaa-catgaatcacatctcatt 35791257  T
Q  122 tcaaca-caacttatcacaaat-catcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccat 219  Q
    |||||| |||| ||||| || | ||||||||||| | ||| ||| ||||| |||||||||||||| ||||| ||||||||||||  ||||||||||||||    
T  35791256 tcaacaacaacatatcaaaatttcatcaattaagtataatctcataacttaacatttatacatactttgaaacatgtaatttcactcacaaacataccat 35791157  T
Q  220 aatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaa 318  Q
    ||||||||||||||| | ||||||  | || || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| ||||||    
T  35791156 aatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 35791057  T
Q  319 agtttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    |  ||| |  |||||||||| |  || |||||||||||||||||    
T  35791056 aaattgtacatgattatgataataactaacccccttaccttaga 35791013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 17471724 - 17471506
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | |||||||  |||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  17471724 tcatcaattaagtataatttcattacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 17471625  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| || |||| |||| |  |||||||||| |    
T  17471624 aaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaaaatttgtacatgattatgataa 17471525  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  17471524 taactaacccccttacctt 17471506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 355
Target Start/End: Complemental strand, 22883220 - 22883006
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| | | |||     
T  22883220 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcatccataaacataccataatcatcaattcaagcacaaga 22883121  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||| ||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  22883120 aaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 22883021  T
Q  341 agacaaaccccctta 355  Q
      || ||||||||||    
T  22883020 taactaaccccctta 22883006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 36989906 - 36989688
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  36989906 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 36989807  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | | ||||||||||||| ||   ||||||||| ||||||||||||||||||||||||||  ||||||| ||| |  |||||||||| |    
T  36989806 aaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaattgcaaagattgtacatgattatgataa 36989707  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  36989706 taactaacccccttacctt 36989688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 7425324 - 7425665
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||| |||   ||  ||| | ||||||| || |||  |   ||  || |||| |    
T  7425324 catcatcaatccataattaagtatatccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaatta-catctcatt 7425422  T
Q  122 tcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||| || ||| ||||| |  |||||||| ||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  7425423 tcaatcaaaacatatcaaatttcatcaatgaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 7425522  T
Q  221 atcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    | |||| ||||||| | ||||||  | || || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||    
T  7425523 accatcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaa 7425622  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
      ||| |  |||||||||| |  || |||||||||||||||||    
T  7425623 aattgtacatgattatgataataactaacccccttaccttaga 7425665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 18778010 - 18777946
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  18778010 caagagcacgaatttaacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 18777946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 27010075 - 27010139
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  27010075 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 27010139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 25426862 - 25426926
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  25426862 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 25426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 7528960 - 7529046
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||||    
T  7528960 caacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaact 7529046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 12608 - 12664
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaa 311  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  12608 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 19500133 - 19500197
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||| ||||||||||||||||||||||||||||||||| |||||||    
T  19500133 caagagcacgaatttagcatgaagtgttcatcaacccattttcatacaacatgagaaaatgcaaa 19500197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 21073613 - 21073549
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||||||||||||| |||||||    
T  21073613 caagagcacgaatttagcatgaattgttcattaacccattttcatacaacatgagaaaatgcaaa 21073549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 22366499 - 22366435
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | ||||||| |||||||||||||||||||||||||||||| |||||||    
T  22366499 caagagcacgaatttagcatgaattgctcatcaacccattttcatacaacatgagaaaatgcaaa 22366435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 43443413 - 43443350
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaa 318  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||| ||||||    
T  43443413 caagagcacgaatttaacatgaattgttcatcaatccattttcatataacatgagaatatgcaa 43443350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 4200005 - 4199939
Alignment:
Q  253 aacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||  | |||||| ||||||||| ||||||||||||||||||||| |||||||    
T  4200005 aacaagagcacgaatttagcatgaattattcatcaactcattttcatacaacatgagaatatgcaaa 4199939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 319
Target Start/End: Complemental strand, 29188397 - 29188238
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaa 257  Q
    |||||||||||  ||||| ||||||  |||||| ||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || |  ||    
T  29188397 tttcacaacttatcatttttacatat-ttgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa 29188300  T
Q  258 gagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||| |  | ||||||||||||| |||||||||||||||||||||||| |||||||    
T  29188299 gagcacgaatctagcatgaattgttcatcgacccattttcatacaacatgagaaaatgcaaa 29188238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 17909571 - 17909646
Alignment:
Q  89 caacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    ||||||| ||| ||||||| |||||||||||||||||| ||||| | |||||| |||||||||||||| |||||||    
T  17909571 caacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttca 17909646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 109028 - 108943
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  109028 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 108943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 9730578 - 9730493
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| || |||||||| ||||||||| ||||||||| |||| | ||| || |||||||||||||| |||||||||||    
T  9730578 caacaacaacatcaatcgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 9730493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 16105703 - 16105788
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  16105703 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 16105788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 32950823 - 32950905
Alignment:
Q  152 agcaaaatttcacaactt-gacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcat 233  Q
    |||| ||||||| ||||| ||| ||||||||||| ||||| |||||||||||| |||||| ||||| || |||||||| ||||    
T  32950823 agcacaatttcataactttgacctttatacatactttgaaacatgtaatttcaaccacaatcatacaattatcatcaaatcat 32950905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 18531237 - 18531119
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| | || ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||    
T  18531237 ctcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatca 18531140  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  18531139 tacaattatcatcaattcatg 18531119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 1219776 - 1219729
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  1219776 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 1219729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 21932637 - 21932590
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  21932637 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 21932590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 21938807 - 21938760
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  21938807 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 21938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 22054003 - 22053886
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| |||| ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||    
T  22054003 ctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatca 22053906  T
Q  214 taccataatcatcaattcat 233  Q
    ||| |  |||||||||||||    
T  22053905 tacaactatcatcaattcat 22053886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 22883340 - 22883293
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  22883340 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 22883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 35582036 - 35582083
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  35582036 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 35582083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 36990026 - 36989979
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  36990026 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 36989979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 108759 - 108725
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  108759 tgattatgatgaagactaacccccttaccttagat 108725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 22053784 - 22053750
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  22053784 tgattatgatgaagactaacccccttaccttagat 22053750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 18531018 - 18530985
Alignment:
Q  330 gattatgatgaagacaaacccccttaccttagat 363  Q
    ||||||||||||||| ||||||||||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagat 18530985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 9730309 - 9730277
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  9730309 tgattatgatgaagactaacccccttaccttag 9730277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 20623287 - 20623323
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  20623287 tgattatgataaagactaacccccttaccttagatga 20623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 21233473 - 21233437
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  21233473 tgattatgataaagactaacccccttaccttagatga 21233437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 25900351 - 25900315
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  25900351 tgattatgataaagactaacccccttaccttagatga 25900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 27182502 - 27182470
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  27182502 tgattatgatgaagactaacccccttaccttag 27182470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 37053062 - 37053098
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  37053062 tgattatgataaagactaacccccttaccttagatga 37053098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 22 - 362
Target Start/End: Original strand, 26339020 - 26339360
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  26339020 catcattaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctctcctcaat 26339119  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26339120 tcaacacaacttatcacaaatcattaattaagcaaaatttcacaacttgacatttatacatagattgaaccatgtaatttcatccacaaacataccataa 26339219  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |    
T  26339220 tcatcaattcaagtataagaaacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaat 26339319  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||||| |  || |||||||||||||||||    
T  26339320 ttgaaattgattatgataataactaacccccttaccttaga 26339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 22352302 - 22351979
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22352302 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 22352203  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22352202 tcaacacaacttag-----------------gcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 22352120  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  22352119 tcatcaattcatgtataagaaacagcaacataacaagagcatgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaat 22352020  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    ||||||||||||||||| |  || |||||||||||||||||    
T  22352019 ttgaaattgattatgataataactaacccccttaccttaga 22351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 22 - 368
Target Start/End: Original strand, 22738269 - 22738616
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||| |||||| |||||||||||||||||| ||||||||| | ||||||||||| |   ||||| |||||||||||| |||||| ||| ||| |||||    
T  22738269 catcattaatccacaattaagtatacccaagtcataattcaccctcaacaacatgtctaagcaacaacaacatccattggaacttgattcacac-tcaat 22738367  T
Q  122 tcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||| | ||||| |||| ||| ||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  22738368 tcaataacaactcatcataaaccatcaattaagcataatttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 22738467  T
Q  221 atcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||| | ||||||  |||| || | ||||| ||||||||| || | |||||||| ||| ||||||||||||||||||||||| |||||||    
T  22738468 atcatcaattcatgcacaagaaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttcatacaacatgagaaaatgcaaa 22738567  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttaccttagatgatgt 368  Q
      |||||||||||||||||||||||||||||||||||||||||||||||    
T  22738568 aattgaaattgattatgatgaagacaaacccccttaccttagatgatgt 22738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 17145913 - 17145572
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||| |||||| |||||||||||| ||||||||| |||||||||||   ||   | || ||||||| || ||| | ||  || || |||| |    
T  17145913 catcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaa-catgaatcacatctcatt 17145815  T
Q  122 tcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||||| |||| ||||| || |||  |||| || | ||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  17145814 tcaacaacaacatatcaaaattcactaattgagtataatttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 17145715  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||| ||| ||| |||| || |  |||||||||||||| || | |||||||||||||| ||||||||||||||||||||| |||||||    
T  17145714 atcatcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttcatacaacatgagaaaatgcaaa 17145615  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
      |||||  |||||||||| |  || |||||||||||||||||    
T  17145614 aattgaacatgattatgataataactaacccccttaccttaga 17145572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 18169090 - 18169308
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  18169090 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 18169189  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  18169190 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 18169289  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  18169290 taactaacccccttacctt 18169308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 7132201 - 7131980
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  7132201 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 7132102  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   ||||||||||||||||||||||||| |||||||||| |||||||  ||| |  |||||||||| |    
T  7132101 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatataacatgagaaaatgcaaaaattgtacatgattatgataa 7132002  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  7132001 taactaacccccttaccttaga 7131980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 142 - 361
Target Start/End: Original strand, 19020606 - 19020826
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    ||||| |||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  19020606 tcatccattaaggataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 19020705  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |  |||||||||||||||||||||||||||||||||| || |||||||  |||||  |||||||||||     
T  19020706 aaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgacaaaatgcaaaaattgaacatgattatgatgg 19020805  T
Q  341 agacaaacccccttaccttag 361  Q
      || ||||||||||||||||    
T  19020806 taactaacccccttaccttag 19020826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 157 - 367
Target Start/End: Original strand, 18248353 - 18248564
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataac 255  Q
    ||||||| | ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| | ||| ||| |||| || | |    
T  18248353 aatttcatatcttaacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 18248452  T
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccctta 355  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||| ||| |||  ||| |   ||||||||| |  || ||||||||||    
T  18248453 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaattgtacaagattatgataataactaaccccctta 18248552  T
Q  356 ccttagatgatg 367  Q
    ||||||||||||    
T  18248553 ccttagatgatg 18248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 20000843 - 20001064
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||     
T  20000843 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccagaaacataccataatcatcaattcatgcacaaga 20000942  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  20000943 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 20001042  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  20001043 taactaacccccttaccttaga 20001064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 15287501 - 15287160
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |||   ||  ||| | ||||||| || |||  |   ||  || |||| |    
T  15287501 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaatta-catctcatt 15287403  T
Q  122 tcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||| || ||| ||||| |  ||||||||  || | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  15287402 tcaatcaaaacatatcaaatttcatcaatggagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 15287303  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    | |||| ||||||| | ||| ||| |||| || | |||||||||||||||  |   |||||||||||| ||||||||||||||||||||||| |||||||    
T  15287302 accatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaa 15287203  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
      ||| |  |||||||||| |  || |||||||||||||||||    
T  15287202 aattgtacatgattatgataataactaacccccttaccttaga 15287160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 15294610 - 15294269
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |||   ||  ||| | ||||||| || |||  |   ||  || |||| |    
T  15294610 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaatta-catctcatt 15294512  T
Q  122 tcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||| || ||| ||||| |  ||||||||  || | ||||||| ||||| ||||||||| |||| ||||| |||||||||||| ||||||||||||||||    
T  15294511 tcaatcaaaacatatcaaatttcatcaatggagtataatttcataacttaacatttatatatactttgaaacatgtaatttcacccacaaacataccata 15294412  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    | |||| ||||||| | ||| ||| |||| || | |||||||||||||||  |   |||||||||||| ||||||||||||||||||||||| |||||||    
T  15294411 accatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaa 15294312  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
      ||| |  |||||||||| |  || |||||||||||||||||    
T  15294311 aattgtacatgattatgataataactaacccccttaccttaga 15294269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 8374643 - 8374720
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  8374643 aatttcataacttaacatttatacatactttgaagcatgtaatttcacccacaaacataccataatcatcaattcatg 8374720  T

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Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 10644453 - 10644517
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  10644453 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 10644517  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 47357888 - 47357952
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||| | |||||||    
T  47357888 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaggaaatgcaaa 47357952  T

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Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 14500412 - 14500326
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||||    
T  14500412 caacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaact 14500326  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 14996170 - 14996272
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcac 164  Q
    |||||||||||| |   ||||| ||||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||    
T  14996170 acaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcac 14996269  T
Q  165 aac 167  Q
    |||    
T  14996270 aac 14996272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 16522878 - 16522963
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||||||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  16522878 caacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 16522963  T

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Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 40885693 - 40885606
Alignment:
Q  146 caattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    ||||| |||| ||||||| |||||||||||||||||||| ||||| |||||||||||| | |||||||| | || |||| |||||||||    
T  40885693 caattgagcataatttcataacttgacatttatacatactttgaa-catgtaatttcaccaacaaacattcaattatcaccaattcatg 40885606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 19697585 - 19697487
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||||||||| |   ||||| ||||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| |||||||    
T  19697585 acaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttca 19697487  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 19708170 - 19708072
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||||||||| |   ||||| ||||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| |||||||    
T  19708170 acaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttca 19708072  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 9295754 - 9295839
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  9295754 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 9295839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 8378385 - 8378441
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaa 311  Q
    |||||||||||||||  |   ||||||||||||||||||||||||||||||||||||    
T  8378385 caagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaa 8378441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 10104420 - 10104302
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| |||| ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||    
T  10104420 ctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatca 10104323  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  10104322 tacaattatcatcaattcatg 10104302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 15675259 - 15675141
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| |||| ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||    
T  15675259 ctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatca 15675162  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  15675161 tacaattatcatcaattcatg 15675141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 8374508 - 8374561
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||| ||||||| |||||||||||  ||||||||| |||||||||||    
T  8374508 catcatcaatcgataattatgtatacccaagccataattcacccacaacaacat 8374561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 9795490 - 9795566
Alignment:
Q  284 atcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||| ||||||||||||||| ||| |||  |||||  ||||||||||||  || ||||||||||||||||    
T  9795490 atcaacccattt-catacaacatgagaaaatgaaaaaattgaacatgattatgatgataactaacccccttaccttag 9795566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 18248218 - 18248271
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||| ||||||| ||||||| |||| ||||||||| |||||||||||    
T  18248218 catcatcaatcgataattatgtataccaaagtcataattcacccacaacaacat 18248271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 9795276 - 9795362
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||||||||||| ||  |||||||||||||| ||||| | ||| || ||| ||||||| || ||||||||||||    
T  9795276 caacaacaacatcaattgaaacttgatttccacctcaattcaacaacaacatgtcataattcaccaattaaacataatttcacaact 9795362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 10104201 - 10104167
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  10104201 tgattatgatgaagactaacccccttaccttagat 10104167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 15675040 - 15675006
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  15675040 tgattatgatgaagactaacccccttaccttagat 15675006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 33241012 - 33241046
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  33241012 tgattatgatgaagactaacccccttaccttagat 33241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 55376525 - 55376491
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  55376525 tgattatgatgaagactaacccccttaccttagat 55376491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 8045273 - 8045305
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  8045273 tgattatgatgaagactaacccccttaccttag 8045305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 16523147 - 16523179
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  16523147 tgattatgatgaagactaacccccttaccttag 16523179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 16609044 - 16609008
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  16609044 tgattatgataaagactaacccccttaccttagatga 16609008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 26680518 - 26680554
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  26680518 tgattatgataaagactaacccccttaccttagatga 26680554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 31115722 - 31115840
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| |||||||  | || ||| ||||| |||| ||||| |||||||| |||||| |||||| || |||| ||||||||||| | |||| ||    
T  31115722 ctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacata-atggaac-atgtaatttcaccaacaatca 31115819  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  31115820 tacaattatcatcaattcatg 31115840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 31132628 - 31132660
Alignment:
Q  331 attatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||| ||||||||||||||||||    
T  31132628 attatgatgaagactaacccccttaccttagat 31132660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 22 - 362
Target Start/End: Complemental strand, 24004 - 23664
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24004 catcatcaatccataattaagtacacccaagttataattcactcacaacaacatgttttgtcaacaacaacatccattgaaacttgtttctcacctcaat 23905  T
Q  122 tcaacacaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 221  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23904 tcaacacaacttatcacaaatcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataa 23805  T
Q  222 tcatcaattcatgtataagaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagt 321  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |    
T  23804 tcatcaatccatgtataagaaacaacaacataaccagagcacgaatttgacatgagttgttcatcaacccattttcatacaacatgagaagatgtaaaat 23705  T
Q  322 ttgaaattgattatgatgaagacaaacccccttaccttaga 362  Q
    |||||||||| |||||| |  || |||||||||| ||||||    
T  23704 ttgaaattgaatatgataataactaacccccttaacttaga 23664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 157 - 368
Target Start/End: Original strand, 44229120 - 44229332
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataac 255  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||| |||| || |||    
T  44229120 aatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaac 44229219  T
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaa-catgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccctt 354  Q
    ||||||||| |||| || | |||||||||||||||||||||||||||| |||||||| ||| |||  ||  |||||||||||||||| ||||||||||||    
T  44229220 aagagcacggatttaacatcaattgttcatcaacccattttcatacaaccatgagaa-atgaaaaaatttgaattgattatgatgaaaacaaaccccctt 44229318  T
Q  355 accttagatgatgt 368  Q
    ||||||||||||||    
T  44229319 accttagatgatgt 44229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 49232556 - 49232774
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  49232556 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 49232655  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  49232656 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 49232755  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  49232756 taactaacccccttacctt 49232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 18911113 - 18911334
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  18911113 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 18911212  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  18911213 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 18911312  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  18911313 taactaacccccttaccttaga 18911334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 359
Target Start/End: Complemental strand, 12265049 - 12264710
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||   ||   | || ||||||| || ||| | ||  || || |||| |    
T  12265049 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaa-catgaatcacatctcatt 12264951  T
Q  122 tcaaca-caacttatcacaaat-catcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccat 219  Q
    |||||| |||| ||||| || | ||||||||||| | ||| ||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  12264950 tcaacaacaacatatcaaaatttcatcaattaagtataatctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccat 12264851  T
Q  220 aatcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaa 318  Q
    ||||||||||||||| | ||| ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| ||||||    
T  12264850 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 12264751  T
Q  319 agtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
    |  ||| |  |||||||||| |  || ||||||||||||||    
T  12264750 aaattgtacatgattatgataataactaacccccttacctt 12264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 1467875 - 1467657
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  1467875 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 1467776  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  1467775 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 1467676  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  1467675 taactaacccccttacctt 1467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 144 - 361
Target Start/End: Complemental strand, 12902224 - 12902006
Alignment:
Q  144 atcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaa 243  Q
    |||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  12902224 atcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaa 12902125  T
Q  244 c-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaag 342  Q
      | || || | |||||||||||||||  |   |||| ||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||||||      
T  12902124 ataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgata 12902025  T
Q  343 acaaacccccttaccttag 361  Q
    || ||||||||||||||||    
T  12902024 actaacccccttaccttag 12902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 15468476 - 15468258
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | |||||||  |||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  15468476 tcatcaattaagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 15468377  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| |||| |||||||||||||||  |   |||||||| ||||||||||||||||||||||||||| ||||||| |||| |  |||||||||| |    
T  15468376 aaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttcatacaacatgagaaaatgcaaaatttgtacatgattatgataa 15468277  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  15468276 taactaacccccttacctt 15468258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 319
Target Start/End: Original strand, 25058859 - 25059037
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  25058859 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 25058958  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||    
T  25058959 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 25059037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 22275329 - 22275547
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga 241  Q
    |||||||||||| | |||||||  |||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  22275329 tcatcaattaagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 22275428  T
Q  242 aacag-caacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||  | || || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| ||||||| |||| |  |||||||||| |    
T  22275429 aaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatttgtacatgattatgataa 22275528  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  22275529 taactaacccccttacctt 22275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 367
Target Start/End: Original strand, 54651562 - 54651803
Alignment:
Q  127 acaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatc 226  Q
    ||||| ||||| || ||| ||||| || | ||||||| ||||| |||||||||||||| ||| | |||| |||||||  ||||| ||||| || ||||||    
T  54651562 acaacatatcaaaattcaccaattgagtataatttcataacttaacatttatacatactttgcaacatgcaatttcactcacaatcatacaattatcatc 54651661  T
Q  227 aattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttga 325  Q
    |||||||| | ||||||  |||| || | |||||||||||||||  |   |||| |||||||||||||||||||||||||||||||  ||||||  ||||    
T  54651662 aattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaattgcaaaaattga 54651761  T
Q  326 aattgattatgatgaagacaaacccccttaccttagatgatg 367  Q
    |  |||||||||||||||||||||||||||||||||||||||    
T  54651762 acatgattatgatgaagacaaacccccttaccttagatgatg 54651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 12811961 - 12812179
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| || |||| ||||| |||||||||||||| ||||| ||||||||| || ||| |||||||||||||||||||||||| | | |||     
T  12811961 tcatcaattaagcataaattcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaagcacaaga 12812060  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| ||||  | | ||||||||||||||| ||   |||||| ||||||||||||||||||||| ||||||| |||||||| ||| |  |||||||||| |    
T  12812061 aaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaatatgagaaaatgcaaagattgtacatgattatgataa 12812160  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  12812161 taactaacccccttacctt 12812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 5228433 - 5228653
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataa-g 240  Q
    |||||||||||| | ||| ||| ||||| |||||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||||||| | || |    
T  5228433 tcatcaattaagtataatctcataacttaacatttatacatattttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagg 5228532  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | || || | |||||||||||||||  |   || ||||||||||||||||||||||  ||||||||| |||||||  |||||  ||||||||||||    
T  5228533 aaataacatcacagcaagagcacgaatttagcaacaa-tgttcatcaacccattttcataacacatgagaaaatgcaaaaattgaacatgattatgatga 5228631  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  5228632 taactaacccccttaccttaga 5228653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 191 - 359
Target Start/End: Complemental strand, 18897131 - 18896962
Alignment:
Q  191 ccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaac 289  Q
    |||||||||| || |||||||||||||||||||||||||||||| | ||||||  |||| || | |||||||||||||||  |   ||||||||||||||    
T  18897131 ccatgtaattccacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaac 18897032  T
Q  290 ccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
    |||||||||||||||||||||| || ||||  ||| |  |||||||||| |  || ||||||||||||||    
T  18897031 ccattttcatacaacatgagaaaatacaaaacttgtacatgattatgataataactaacccccttacctt 18896962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 15615086 - 15615174
Alignment:
Q  274 tgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||   |  |||||||||| ||||| ||||||||||||||| ||||    
T  15615086 tgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---acatgattatgataaagactaacccccttaccttaaatga 15615174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 15938478 - 15938393
Alignment:
Q  276 aattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||| ||||  || ||||||||||||||||    
T  15938478 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 15938393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 41270309 - 41270373
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||    
T  41270309 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagtagatgcaaa 41270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 19946757 - 19946844
Alignment:
Q  82 tcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    |||||| ||||||| ||||||||||| ||| |||||||||||||| ||||| | ||| ||||||||||||||||| ||||||||||||    
T  19946757 tcaacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataaatcatcaattaagcataatttcacaact 19946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 15936636 - 15936551
Alignment:
Q  276 aattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||| ||||  || ||||||| ||||||||    
T  15936636 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccataccttag 15936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 16821373 - 16821437
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||| | |||||||    
T  16821373 caagagcacggatttgacataaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 16821437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 55316453 - 55316517
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||| | |||||||    
T  55316453 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 55316517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 11477380 - 11477301
Alignment:
Q  89 caacatccattgaaacttgtttctcacctcaattcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||| | ||| || |||||||||||||| |||||||||||    
T  11477380 caacatcaattgaaacttgattctcacctcaattcaaccacaacatgtcataattcatcaattaagcataatttcacaac 11477301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 14285021 - 14285107
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| | ||||||||||    
T  14285021 caacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcatattttcacaact 14285107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 16934186 - 16934084
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcac 164  Q
    |||||||||||| |   ||||| ||||||| ||||||||||| ||||||||| |||||||| ||||| | ||| || |||||||||||||| ||||||||    
T  16934186 acaacaacatgtctcagcaacaacaacatcaattgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcac 16934087  T
Q  165 aac 167  Q
    |||    
T  16934086 aac 16934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 44228985 - 44229038
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  44228985 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 44229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 9303295 - 9303210
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||| |||||||||| |||| | ||| || |||||||||||||| |||||||||||    
T  9303295 caacaacaacatcaattgaaacttgattcacaccccaattcaacagcaacatgtcataagtcatcaattaagcataatttcacaac 9303210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 8268933 - 8268859
Alignment:
Q  90 aacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| |||||||    
T  8268933 aacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttca 8268859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 8276033 - 8275959
Alignment:
Q  90 aacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| |||||||    
T  8276033 aacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttca 8275959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 11986300 - 11986218
Alignment:
Q  152 agcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    |||| ||||||| ||||||||||| |||||||| || || |||||||||||| |||||| ||||| || ||||| || |||||    
T  11986300 agcacaatttcataacttgacattaatacatactttaaaacatgtaatttcaaccacaatcatacaattatcattaaatcatg 11986218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 13839201 - 13839237
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13839201 tgattatgatgaagactaacccccttaccttagatga 13839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 1467995 - 1467948
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  1467995 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 1467948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 18897255 - 18897208
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  18897255 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 18897208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 49232436 - 49232483
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  49232436 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 49232483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 11986111 - 11986077
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  11986111 tgattatgatgaagactaacccccttaccttagat 11986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 14285290 - 14285324
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  14285290 tgattatgatgaagactaacccccttaccttagat 14285324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 51961062 - 51961028
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  51961062 tgattatgatgaagactaacccccttaccttagat 51961028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 2449183 - 2449147
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  2449183 tgattatgataaagactaacccccttaccttagatga 2449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 19947027 - 19947059
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  19947027 tgattatgatgaagactaacccccttaccttag 19947059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 23492697 - 23492733
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  23492697 tgattatgataaagactaacccccttaccttagatga 23492733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 38168238 - 38168274
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  38168238 tgattatgataaagactaacccccttaccttagatga 38168274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 111; Significance: 6e-56; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 367
Target Start/End: Complemental strand, 10475 - 10249
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga 241  Q
    |||||||||||| | ||||||| |||||  ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  10475 tcatcaattaagtataatttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 10376  T
Q  242 aac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||  | || || | |||||||||||||||  |   |||| ||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||| ||    
T  10375 aaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgaaga 10276  T
Q  341 agacaaacccccttaccttagatgatg 367  Q
    |||||||||||||||||||||||||||    
T  10275 agacaaacccccttaccttagatgatg 10249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 10595 - 10548
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||||| || |||| |||||||    
T  10595 catcatcaatccacaattaagtatacccaagtcatgattccctcacaa 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 157 - 368
Target Start/End: Original strand, 54010 - 54221
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaa-cagcaacataac 255  Q
    ||||||||||||| ||| |||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||| || |      
T  54010 aatttcacaacttaacaattatacatgctttgaac-atgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaacagcatcacagt 54108  T
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccctta 355  Q
    ||||||||||||||  | | ||||||||||||||||||||||||| |||||||||| |||||||  ||  |||||||||||||||| |||||||||||||    
T  54109 aagagcacgaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaaatttgaattgattatgatgaaaacaaaccccctta 54208  T
Q  356 ccttagatgatgt 368  Q
    |||||||||||||    
T  54209 ccttagatgatgt 54221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 6e-53; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 13721064 - 13720843
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  13721064 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 13720965  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  13720964 aaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 13720865  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  13720864 taactaacccccttaccttaga 13720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 22006394 - 22006176
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  22006394 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 22006295  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  22006294 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 22006195  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  22006194 taactaacccccttacctt 22006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 271496 - 271278
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  271496 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 271397  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  271396 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 271297  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  271296 taactaacccccttacctt 271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 644424 - 644642
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  644424 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 644523  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  644524 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 644623  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  644624 taactaacccccttacctt 644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 830159 - 830377
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  830159 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 830258  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  830259 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 830358  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  830359 taactaacccccttacctt 830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 16873187 - 16872966
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  16873187 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 16873088  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| | ||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  16873087 aaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 16872988  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  16872987 taactaacccccttaccttaga 16872966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 13662401 - 13662180
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||  ||||||| | |||     
T  13662401 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatncattcatgcacaaga 13662302  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   ||||||| |||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  13662301 aaatagcatcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 13662202  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  13662201 taactaacccccttaccttaga 13662180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 22088930 - 22088712
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| | | |||||||||||||||||||||||| | | |||     
T  22088930 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacctataaacataccataatcatcaattcaagcacaaga 22088831  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||| ||||||||||||||||||||| |||||||| ||| |  ||||||||||||    
T  22088830 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatacaacatgagaaaatgcaaagattgtacatgattatgatga 22088731  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  22088730 taactaacccccttacctt 22088712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 15319295 - 15319077
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||  |||||||||||||| | ||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  15319295 tcatcaattaagcataatttcataactcaacatttatacatacttagaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 15319196  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| || | || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  15319195 aaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 15319096  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  15319095 taactaacccccttacctt 15319077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 359
Target Start/End: Complemental strand, 15499664 - 15499446
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||  |||||||||||||| | ||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  15499664 tcatcaattaagcataatttcataactcaacatttatacatacttagaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 15499565  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| || | || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  15499564 aaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 15499465  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  15499464 taactaacccccttacctt 15499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 367
Target Start/End: Original strand, 16195351 - 16195577
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga 241  Q
    |||| ||||||| | ||| ||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  16195351 tcataaattaagtataatctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 16195450  T
Q  242 a-acagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    | | |||| || | || ||| ||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  16195451 acatagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 16195550  T
Q  341 agacaaacccccttaccttagatgatg 367  Q
      |  ||||||||||||||||| ||||    
T  16195551 taattaacccccttaccttagaagatg 16195577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 21844654 - 21844526
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    |||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || | |||||||||||||||||| |||||||||||||||||    
T  21844654 catgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacc 21844555  T
Q  291 cattttcatacaacatgagaagatgcaaa 319  Q
    || |||||||||||||||| | |||||||    
T  21844554 caatttcatacaacatgagcaaatgcaaa 21844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 21851983 - 21851919
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | |||||||    
T  21851983 caagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaa 21851919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 362
Target Start/End: Original strand, 24549120 - 24549319
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaa 257  Q
    |||||||||||  ||||| ||||||  |||||| ||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || |  ||    
T  24549120 tttcacaacttatcatttttacatat-ttgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa 24549217  T
Q  258 gagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacc 357  Q
    |||||||||| |  | |||||||||||||||||||||||||||||||||||||| ||||||| ||   |  |||||||||| |  || ||||||||||||    
T  24549218 gagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatt---acatgattatgataatcactaacccccttacc 24549314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 319
Target Start/End: Complemental strand, 6774371 - 6774212
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaa 257  Q
    |||||||||||  ||||| ||||||  |||||| ||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || |  ||    
T  6774371 tttcacaacttatcatttttacatat-ttgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa 6774274  T
Q  258 gagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||| |  | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  6774273 gagcacgaatctagcatgaattgttcatcaacccattttcatataacatgagaaaatgcaaa 6774212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 22886387 - 22886471
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaacacaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||  ||||| | ||| |  |||||||||||||| |||||||||||    
T  22886387 caacaacaacatcaattgaaacttgattctcacctcaattcacaacaacatgtcatagttcatcaattaagcataatttcacaac 22886471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 16674409 - 16674346
Alignment:
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||||||||||||||  | ||||||||||| |||||||||||||||||||||||| | |||||||    
T  16674409 aagagcacgaatttagcatgaattgttcaacaacccattttcatacaacatgagcaaatgcaaa 16674346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 30120956 - 30121011
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgaga 310  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||    
T  30120956 caagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgaga 30121011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 3431493 - 3431391
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcac 164  Q
    |||||||||||| |   ||||| ||||||| || |||||||| ||||||||| |||||||| ||||| | ||| || |||||||||||||| ||||||||    
T  3431493 acaacaacatgtctcagcaacaacaacatcaatcgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcac 3431394  T
Q  165 aac 167  Q
    |||    
T  3431393 aac 3431391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 22147498 - 22147579
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    ||||| ||||||| ||| ||| ||| |||||||||||||||||| ||||| | |||||| |||||||||||||| |||||||    
T  22147498 caacaacaacatcaattaaaatttgattctcacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttca 22147579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 2545005 - 2545092
Alignment:
Q  82 tcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    |||||| ||||||| ||||||||||| ||| |||||||||||||| ||||| | | | || |||||||||||||| ||||| ||||||    
T  2545005 tcaacaacaacatcaattgaaacttgattcccacctcaattcaacaacaacatgttataattcatcaattaagcataattttacaact 2545092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 16038817 - 16038785
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||||||||||||||||||||    
T  16038817 tgattatgatgaagacaaacccccttaccttag 16038785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 271616 - 271569
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  271616 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 271569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 644304 - 644351
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  644304 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 644351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 830039 - 830086
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  830039 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 830086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 13662521 - 13662474
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||||||||| |||||||||| | || ||||||||||||    
T  13662521 catcatcaatccataattatgtatacccaaatcatgattcactcacaa 13662474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 15319415 - 15319368
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  15319415 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 15319368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 15499784 - 15499737
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  15499784 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 15499737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 22089050 - 22089003
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  22089050 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 22089003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 18612449 - 18612547
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaaca-caacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||||||||| |   ||||| ||||||| ||| || |||| ||  ||||||||||||||| |||| | |||||| |||||||||||||| |||||||    
T  18612449 acaacaacatgtctcagcaacaacaacatcaattaaatcttgatttccacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttca 18612547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 18619354 - 18619452
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaaca-caacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||||||||| |   ||||| ||||||| ||| || |||| ||  ||||||||||||||| |||| | |||||| |||||||||||||| |||||||    
T  18619354 acaacaacatgtctcagcaacaacaacatcaattaaatcttgatttccacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttca 18619452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 16195230 - 16195283
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    |||||||||||||||||||  |||||| |||| ||||||||| | |||||||||    
T  16195230 catcatcaatccataattatatatacctaagtcataattcaccctcaacaacat 16195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 21494681 - 21494600
Alignment:
Q  46 acccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaaca 127  Q
    ||||||||||||| |||   |||||||||| | |   ||||| ||||||| ||||||||||| ||||||||||||| |||||    
T  21494681 acccaagttataaatcataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaatccaaca 21494600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 22006514 - 22006461
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    |||||||| |||| |||||||||||||||| | || |||||||||||| |||||    
T  22006514 catcatcagtccacaattaagtatacccaaatcatgattcactcacaataacat 22006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 2545266 - 2545298
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  2545266 tgattatgatgaagactaacccccttaccttag 2545298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 3431207 - 3431175
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  3431207 tgattatgatgaagactaacccccttaccttag 3431175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 5238405 - 5238441
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  5238405 tgattatgataaagactaacccccttaccttagatga 5238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 22907159 - 22907123
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  22907159 tgattatgataaagactaacccccttaccttagatga 22907123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 24385683 - 24385647
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  24385683 tgattatgataaagactaacccccttaccttagatga 24385647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 24661193 - 24661157
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  24661193 tgattatgataaagactaacccccttaccttagatga 24661157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 43685864 - 43685900
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  43685864 tgattatgataaagactaacccccttaccttagatga 43685900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 154143 - 153922
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||| | |||     
T  154143 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaacttcacccacaaacataccataatcatcaattcatgcacaaga 154044  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  154043 aaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 153944  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  153943 taactaacccccttaccttaga 153922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 169930 - 169866
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  169930 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 169866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 36326 - 36391
Alignment:
Q  254 acaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||| |||||||    
T  36326 acaagagcacgaatttagcatgaattgttcatcaacccagtttcatacaacatgagaatatgcaaa 36391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 61153 - 61121
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  61153 tgattatgatgaagactaacccccttaccttag 61121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 99; Significance: 9e-49; HSPs: 4)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 31429 - 31647
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  31429 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 31528  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  31529 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 31628  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  31629 taactaacccccttacctt 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 310
Target Start/End: Original strand, 39766 - 39935
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||| | | |     
T  39766 tcatcaattaagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaaaataccataatcatcaattcatgcacagga 39865  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgaga 310  Q
    ||| || | || | |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  39866 aaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 31309 - 31356
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  31309 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 31356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 39646 - 39693
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  39646 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 39693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 39223 - 39441
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | | |||     
T  39223 tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcacaaga 39322  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | ||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  39323 aaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 39422  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  39423 taactaacccccttacctt 39441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 43167 - 43287
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaaacagcaacat---aacaagagcacgaatttgacgtgaattgttcatcaa 288  Q
    |||||||||||| | |||| ||||| || |||||||||||||| ||| ||||||  |||||   | |||||||||||||||||| ||||||| |||||||    
T  43167 catgtaatttcaccaacaatcatacaattatcatcaattcatgcata-gaaacat-aacatcccagcaagagcacgaatttgacatgaattgctcatcaa 43264  T
Q  289 cccattttcatacaacatgagaa 311  Q
    |||||||||||||||||||||||    
T  43265 cccattttcatacaacatgagaa 43287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 39103 - 39150
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||    
T  39103 catcatcaatccacaattaagtatacccaaatcataattcacttacaa 39150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 1650 - 1429
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||     
T  1650 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcatgcacaaga 1551  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| ||||  | |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |    
T  1550 aaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataa 1451  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  1450 taactaacccccttaccttaga 1429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 1711 - 1490
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | |||     
T  1711 tcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 1612  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||| |||| || | |||| |||||| |||  |   |||||||||||||||||||||||||||||||||||| |||||||  |||||  |||||||||| |    
T  1611 aaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgataa 1512  T
Q  341 agacaaacccccttaccttaga 362  Q
      || |||||||||||||||||    
T  1511 taactaacccccttaccttaga 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 1831 - 1784
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  1831 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 94; Significance: 9e-46; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 142 - 365
Target Start/End: Complemental strand, 34294 - 34070
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga 241  Q
    |||||||||||| | || |||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  34294 tcatcaattaagtataacttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 34195  T
Q  242 aac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaaca-tgagaagatgcaaagtttgaaattgattatgatg 339  Q
    ||  |||  || | |||||||||||||||  |   |||| ||||||||||||||| ||||||||| |||||| |||||||  |||||  |||||||||||    
T  34194 aaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaacccattt-catacaacaatgagaaaatgcaaaaattgaacatgattatgatg 34096  T
Q  340 aagacaaacccccttaccttagatga 365  Q
    ||||| ||||||||||||||||||||    
T  34095 aagactaacccccttaccttagatga 34070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 34414 - 34367
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||    
T  34414 catcatcaatccataatttagtatacccaagtcatgattcactcacaa 34367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 359
Target Start/End: Complemental strand, 7712 - 7374
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||   ||   ||||  ||| |  | || ||| ||  || || |||| |    
T  7712 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacatcagttaataacaataacct-taatggaacatgaatcacatctcatt 7614  T
Q  122 tcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    | ||| ||||| |||||  | |||  |||| || | ||||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  7613 ttaacaacaacatatcaagattcactaattgagtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccata 7514  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||| |||||||||| | ||| ||| |||| || |||||||||||||||||      |||||||||||||||||||||||||||||||||||| |||||||    
T  7513 atcttcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatacaacatgagaaaatgcaaa 7414  T
Q  320 gtttgaaattgattatgatgaagacaaacccccttacctt 359  Q
      | |||  |||||||||| |  || ||||||||||||||    
T  7413 aatggaacatgattatgataataactaacccccttacctt 7374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 359
Target Start/End: Original strand, 29282 - 29500
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga 241  Q
    |||||||||||||| ||||||| ||||| ||||||| |||||| ||||| |||||||||||| ||| ||||||| |||||||| ||||||| | | ||||    
T  29282 tcatcaattaagcataatttcataacttaacatttacacatactttgaaacatgtaatttcacccataaacataacataatcaacaattcaagcacaaga 29381  T
Q  242 aac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatga 340  Q
    ||  |||| || | ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||| |||||||| ||| |  |||||||||| |    
T  29382 aaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataa 29481  T
Q  341 agacaaacccccttacctt 359  Q
      || ||||||||||||||    
T  29482 taactaacccccttacctt 29500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 2512 - 2734
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- 240  Q
    |||||||||||| | |||||||  |||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||| | |||     
T  2512 tcatcaattaagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataagcatcaattcatgcacaaga 2611  T
Q  241 aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgc-aaagtttgaaattgattatgatg 339  Q
    ||| |||| ||   ||||||||||||||   |   |||||||||||||||||||||||||||||||||||| |||| ||| |||| |  ||||||||||     
T  2612 aaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaatttgtacatgattatgata 2711  T
Q  340 aagacaaacccccttaccttaga 362  Q
    |  || |||||||||||||||||    
T  2712 ataactaacccccttaccttaga 2734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 2392 - 2445
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    ||||||||||||| ||||||||||||||||   || |||||||||||| |||||    
T  2392 catcatcaatccacaattaagtatacccaaaccatgattcactcacaataacat 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 363
Target Start/End: Original strand, 45135 - 45373
Alignment:
Q  127 acaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatc 226  Q
    ||||| ||||| || ||| ||||| || | ||||||| |||||||||||||||||||| ||||| |||||||||||| |||||| ||||| || ||||||    
T  45135 acaacatatcaaaattcaccaattgagtacaatttcaaaacttgacatttatacatactttgaaacatgtaatttcacccacaatcatacaattatcatc 45234  T
Q  227 aattcatgtata-agaaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaac-atgagaagatgcaaagtttg 324  Q
    |||||||| | |   ||| |||| || |||||| |||||||||| ||   |||| |||||||||||||||||||||||| |||||||  |||||   |||    
T  45235 aattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatcaacccattttcatacaacaatgagaaattgcaataattg 45334  T
Q  325 aaattgattatgatgaagacaaacccccttaccttagat 363  Q
    ||  |||||||||||||||| ||||||||||||||||||    
T  45335 aacatgattatgatgaagactaacccccttaccttagat 45373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 363
Target Start/End: Original strand, 54416 - 54759
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaat 121  Q
    |||||||||||||||| || |||||||||| | || |||||| |||||||||||   ||   | || ||||||| || ||| | ||  || || |||| |    
T  54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaa-catgaatcacatctcatt 54514  T
Q  122 tcaaca-caacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccata 220  Q
    |||||| |||| ||||| || ||| ||||| || | ||||||| |||||||||||||||||||| ||||| |||| ||||||| |||||| ||||| ||     
T  54515 tcaacaacaacatatcaaaattcaccaattgagtacaatttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt 54614  T
Q  221 atcatcaattcatgtataag-aaacagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaac-atgagaagatgcaa 318  Q
    |||||||||||||| | ||| ||| |||| || | ||||  ||||||||| ||   |||| |||||||||||||||||||||||| |||||||  |||||    
T  54615 atcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatacaacaatgagaaattgcaa 54714  T
Q  319 agtttgaaattgattatgatgaagacaaacccccttaccttagat 363  Q
       |||||  |||||||||||||||| |||| |||||||||||||    
T  54715 taattgaacatgattatgatgaagactaaccaccttaccttagat 54759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 45011 - 45064
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 75  Q
    |||||||||||||||| || |||||||||||| || |||||| |||||||||||    
T  45011 catcatcaatccataaatatgtatacccaagtcatgattcacccacaacaacat 45064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 157 - 368
Target Start/End: Original strand, 3549 - 3765
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaa-cagcaacataac 255  Q
    ||||||||||||| ||| |||||||| | |||||| ||||||||||| |||||| ||||||||||||||||||||||| | |||||| || || || |      
T  3549 aatttcacaacttaacaattatacatgctttgaac-atgtaatttcacccacaatcataccataatcatcaattcatggacaagaaaacaacatcacagt 3647  T
Q  256 aagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatg-----aagacaaaccc 350  Q
    |||||||| |||||  | | ||||||||||||||||||||||||| |||||||||| |||||||  ||  ||||||||||||||     || ||||||||    
T  3648 aagagcactaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaaatttgaattgattatgatgaaaacaaaacaaaccc 3747  T
Q  351 ccttaccttagatgatgt 368  Q
    | ||||||||||||||||    
T  3748 cattaccttagatgatgt 3765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 367
Target Start/End: Original strand, 3892 - 4068
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    |||||||||||| | |||| ||||| || |||||||||||||| | ||||||  |||| || |||||||||||||||||  |  ||||||||||||||||    
T  3892 catgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacc 3991  T
Q  291 cattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttagatgatg 367  Q
    ||||||||||||||||||||| |||||||  ||| |  |||||||||| |  || || |||||||||||||| ||||    
T  3992 cattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaaccccttaccttagaagatg 4068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 116 - 319
Target Start/End: Original strand, 3056 - 3260
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| |||| ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||    
T  3056 ctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatca 3153  T
Q  214 taccataatcatcaattcatgtataagaa-acagcaacataacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaag 312  Q
    ||| || |||||||||||||| |||  || | | || || | |||||||||||||||  |  |||||||||||||||||||||||||||||||||||||     
T  3154 tacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaa 3253  T
Q  313 atgcaaa 319  Q
    |||||||    
T  3254 atgcaaa 3260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 368
Target Start/End: Complemental strand, 12149 - 12036
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaa-catgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccct 353  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| |  || ||||||||    
T  12149 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaa-atgaaaaatttgaaattgattatgataataactaaccccct 12051  T
Q  354 taccttagatgatgt 368  Q
    |||||||||||||||    
T  12050 taccttagatgatgt 12036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 132 - 31
Alignment:
Q  142 tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga 241  Q
    |||||||||||| | ||||||| ||||| ||||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  132 tcatcaattaagtataatttcataacttaacatttacacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaga 33  T
Q  242 aa 243  Q
    ||    
T  32 aa 31  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 252 - 205
Alignment:
Q  22 catcatcaatccataattaagtatacccaagttataattcactcacaa 69  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  252 catcatcaatccacaattaagtatacccaaatcatgattcactcacaa 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 368
Target Start/End: Complemental strand, 9462 - 9257
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaa 257  Q
    |||||||||||  ||||| ||||||  |||||| ||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || | |||    
T  9462 tttcacaacttatcatttttacatat-ttgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaa 9365  T
Q  258 gagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacc 357  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||   |  ||||| |||| |  || ||||||||||||    
T  9364 aagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacc 9268  T
Q  358 ttagatgatgt 368  Q
    |||||||||||    
T  9267 ttagatgatgt 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 368
Target Start/End: Complemental strand, 16360 - 16155
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaa 257  Q
    |||||||||||  ||||| ||||||  |||||| ||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || | |||    
T  16360 tttcacaacttatcatttttacatat-ttgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaa 16263  T
Q  258 gagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttacc 357  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||   |  ||||| |||| |  || ||||||||||||    
T  16262 aagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacc 16166  T
Q  358 ttagatgatgt 368  Q
    |||||||||||    
T  16165 ttagatgatgt 16155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 5298 - 5170
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    |||||||||||| | |||| ||||| || |||||||||||||| | ||||||  |||| || | ||||||||||||||| ||  ||||||||||||||||    
T  5298 catgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacc 5199  T
Q  291 cattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||| |||||| |||||||    
T  5198 cattttcatacaacgtgagaaaatgcaaa 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 64541 - 64477
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  64541 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 64477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 108001 - 108086
Alignment:
Q  276 aattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||| ||||  || ||||||||||||||||    
T  108001 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattataatgataactaacccccttaccttag 108086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 205 - 323
Alignment:
Q  192 catgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaagagcacgaatttgacgtgaattgttcatcaacc 290  Q
    |||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || | |||||||||||||||||| |||||||||||||||||    
T  205 catgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacc 304  T
Q  291 cattttcatacaacatgag 309  Q
    |||||||||| ||||||||    
T  305 cattttcatataacatgag 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 11788 - 11890
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaacacaacttatcacaaatcatcaattaagcaaaatttcaca 165  Q
    |||||||||||| |   ||||| ||||||| ||||||||||| ||||||||||||||||||| ||| | |||  | |||||||||||||| |||||||||    
T  11788 acaacaacatgtctcagcaacaacaacatcaattgaaacttgattctcacctcaattcaacaaaacatgtcatgattcatcaattaagcataatttcaca 11887  T
Q  166 act 168  Q
    |||    
T  11888 act 11890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 26371 - 26335
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  26371 tgattatgataaagactaacccccttaccttagatga 26335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 21136 - 21070
Alignment:
Q  253 aacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||||||    
T  21136 aacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 21070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 14060 - 14016
Alignment:
Q  275 gaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||    
T  14060 gaattgtgcatcaacccattttcatacaacatgagaaaatgcaaa 14016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 10772 - 10666
Alignment:
Q  253 aacaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaaccccc 352  Q
    |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||| |||||||  ||| |  |||||||||| |  || |||||||    
T  10772 aacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccc 10673  T
Q  353 ttacctt 359  Q
    |||||||    
T  10672 ttacctt 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 31694 - 31629
Alignment:
Q  254 acaagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    ||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||| |||||||    
T  31694 acaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaatatgcaaa 31629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 1322 - 1258
Alignment:
Q  255 caagagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaagatgcaaa 319  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||| | |||||||    
T  1322 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagtaaatgcaaa 1258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 17764 - 17844
Alignment:
Q  89 caacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||||    
T  17764 caacatcaattgaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaact 17844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 18027 - 18061
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  18027 tgattatgatgaagactaacccccttaccttagat 18061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 56258 - 56151
Alignment:
Q  127 acaacttatcacaaatcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatc 226  Q
    |||||||| || || ||| || || |||| ||||||| |||||||||||||||||||| || || |||||||||||| |||||| ||||| || ||||||    
T  56258 acaacttagcaaaattcaccatttgagcacaatttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatc 56159  T
Q  227 aattcatg 234  Q
    || |||||    
T  56158 aaatcatg 56151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 50043 - 49957
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaa-cacaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||| |||||| | ||| || |||||||||||| | ||||||||||||    
T  50043 caacaacaacatcaattgaaacttgattctcacctcaattcaaccacaacatgtcataattcatcaattaagtataatttcacaact 49957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 311
Target Start/End: Complemental strand, 13438 - 13287
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaa-acagcaacataacaa 257  Q
    |||||||||||  ||||| ||||||  |||||| ||||||||||| | |||| ||||| || |||||||||||||| |||  || | | || || |  ||    
T  13438 tttcacaacttatcatttttacatat-ttgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacactaa 13341  T
Q  258 gagcacgaatttgacgtgaattgttcatcaacccattttcatacaacatgagaa 311  Q
    |||||||||| |  | ||||||||||||||||||||||||||||||||||||||    
T  13340 gagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaa 13287  T

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Target: scaffold0118 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 34607 - 34522
Alignment:
Q  84 aacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaact 168  Q
    |||| ||||||| ||||||||||| || ||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||||    
T  34607 aacaacaacatcaattgaaacttgattttcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaact 34522  T

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Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 34339 - 34305
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  34339 tgattatgatgaagactaacccccttaccttagat 34305  T

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Target: scaffold0173 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 5264 - 5362
Alignment:
Q  66 acaacaacatgttttgtcaacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    |||||||||||| |   ||||| ||||||| ||| || |||| |||||||||||||||||| ||||| | |||||| |||||||||||||| |||||||    
T  5264 acaacaacatgtctcagcaacaacaacatcaattaaatcttgattctcacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttca 5362  T

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Target: scaffold0173; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 5550 - 5582
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  5550 tgattatgatgaagactaacccccttaccttag 5582  T

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Target: scaffold0335 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 5776 - 5695
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||| ||||| | ||| || |||| ||||||||| |||||||    
T  5776 caacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacatgtcataattcattaattaagcataatttca 5695  T

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Target: scaffold0335; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 5507 - 5475
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  5507 tgattatgatgaagactaacccccttaccttag 5475  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 13342 - 13266
Alignment:
Q  284 atcaacccattttcatacaacatgagaagatgcaaagtttgaaattgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||| ||||||||||||||| |||||||  |||||  ||||||||||||  || ||||||||||||||||    
T  13342 atcaacccattt-catacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttag 13266  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 13479 - 13395
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaa 166  Q
    ||||| ||||||| ||||||||||| ||  |||||||||||||| ||||| | ||| || ||||||||||| || ||||||||||    
T  13479 caacaacaacatcaattgaaacttgatttccacctcaattcaacaacaacatgtcataattcatcaattaaacataatttcacaa 13395  T

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Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 108106 - 108070
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  108106 tgattatgataaagactaacccccttaccttagatga 108070  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 130616 - 130701
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  130616 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 130701  T

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Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 165161 - 165080
Alignment:
Q  83 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttca 163  Q
    ||||| ||||||| ||| ||||||| |||||||||||||||||| ||||| | ||| || |||||||||||||| |||||||    
T  165161 caacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttca 165080  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 8942 - 9060
Alignment:
Q  116 ctcaattcaaca-caacttatcacaaatcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaaca 213  Q
    |||||||||||| ||||||| || || ||| ||||| |||| ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||    
T  8942 ctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatca 9039  T
Q  214 taccataatcatcaattcatg 234  Q
    ||| || ||||||||||||||    
T  9040 tacaattatcatcaattcatg 9060  T

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Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 13626 - 13717
Alignment:
Q  142 tcatcaattaagcaaaattt-cacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    ||||||||| |||| ||||| |||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||||| || ||||||||||||||    
T  13626 tcatcaattgagcacaattttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatg 13717  T

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Target: scaffold0132; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 13825 - 13859
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  13825 tgattatgatgaagactaacccccttaccttagat 13859  T

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Target: scaffold0615 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 6405 - 6326
Alignment:
Q  89 caacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 167  Q
    ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||  |||||||||||    
T  6405 caacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcttaatttcacaac 6326  T

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Target: scaffold0125 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 41786 - 41859
Alignment:
Q  159 tttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||||| | |||| ||||| || ||||||||||||||    
T  41786 tttcacaacttcacatttttacata-attgaac-atgtaatttcaccaacaatcatacaattatcatcaattcatg 41859  T

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Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 41966 - 41998
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttag 361  Q
    |||||||||||||||| ||||||||||||||||    
T  41966 tgattatgatgaagactaacccccttaccttag 41998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 339 - 373
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  339 tgattatgatgaagactaacccccttaccttagat 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 25532 - 25566
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagat 25566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 17240 - 17207
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttaga 362  Q
    |||||||||||||||| |||||||||||||||||    
T  17240 tgattatgatgaagactaacccccttaccttaga 17207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 3324 - 3401
Alignment:
Q  157 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatg 234  Q
    ||||||| ||||||| |||||||||||| |||||  ||||||||||| | |||| ||||| |  ||||| ||||||||    
T  3324 aatttcataacttgatatttatacatactttgaaatatgtaatttcaccaacaatcatacaaatatcattaattcatg 3401  T

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Target: scaffold0597 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 909 - 873
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  909 tgattatgataaagactaacccccttaccttagatga 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 9913 - 9877
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  9913 tgattatgataaagactaacccccttaccttagatga 9877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 6027 - 5987
Alignment:
Q  323 tgaaattgattatgatgaagacaaacccccttaccttagat 363  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  6027 tgaaaatgattatgataaagactaacccccttaccttagat 5987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 22858 - 22894
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  22858 tgattatgataaagactaacccccttaccttagatga 22894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 27113 - 27149
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  27113 tgattatgataaagactaacccccttaccttagatga 27149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 1527 - 1491
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  1527 tgattatgataaagactaacccccttaccttagatga 1491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 37011 - 36975
Alignment:
Q  329 tgattatgatgaagacaaacccccttaccttagatga 365  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  37011 tgattatgataaagactaacccccttaccttagatga 36975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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