View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0772_low_10 (Length: 353)
Name: NF0772_low_10
Description: NF0772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0772_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 31 - 223
Target Start/End: Complemental strand, 16040880 - 16040689
Alignment:
| Q |
31 |
gaaatataatcaaaatacacgcatgtaactatgtaagcatcgacaaagataatgtttaataaagtataaccaaatatattacattactacaaatttgatt |
130 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16040880 |
gaaatataatcaaa-tacacgcatgtaactatgtaagcatcgacaaagataatgtttaataaagtataaccaaatatattacattactacaaatttgatt |
16040782 |
T |
|
| Q |
131 |
aaatactttgcttagataatattttccatacatataattataatattattcactattattttactaaatagtgttcaacatgctaataacttt |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16040781 |
aaatactttgcttagataatattttccatacatataattataatattattcactattattttactaaatagtgttcaacatgctaataacttt |
16040689 |
T |
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