View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0773_high_18 (Length: 251)
Name: NF0773_high_18
Description: NF0773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0773_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 28826177 - 28826144
Alignment:
| Q |
30 |
aaataagtatactttattctgctagatttctaca |
63 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
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|
| T |
28826177 |
aaataagtatactttattctgctagatttctaca |
28826144 |
T |
|
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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 3216967 - 3217000
Alignment:
| Q |
30 |
aaataagtatactttattctgctagatttctaca |
63 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
3216967 |
aaataagtatactttattctgctagatttctaca |
3217000 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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