View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0774_low_31 (Length: 283)

Name: NF0774_low_31
Description: NF0774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0774_low_31
NF0774_low_31
[»] chr4 (51 HSPs)
chr4 (92-283)||(17048243-17048434)
chr4 (108-283)||(14746692-14746867)
chr4 (108-283)||(13592034-13592209)
chr4 (108-283)||(10694998-10695173)
chr4 (108-283)||(10908764-10908939)
chr4 (102-283)||(26013312-26013495)
chr4 (108-283)||(53631365-53631540)
chr4 (102-283)||(15497144-15497326)
chr4 (102-283)||(15884166-15884348)
chr4 (123-283)||(15008105-15008266)
chr4 (108-283)||(40619662-40619831)
chr4 (206-283)||(43256267-43256344)
chr4 (110-182)||(9923210-9923282)
chr4 (167-281)||(19857417-19857531)
chr4 (206-283)||(10712695-10712772)
chr4 (206-283)||(10926465-10926542)
chr4 (206-283)||(12487550-12487627)
chr4 (110-182)||(11479577-11479649)
chr4 (211-283)||(14954357-14954429)
chr4 (108-217)||(15365022-15365133)
chr4 (211-283)||(25689714-25689786)
chr4 (108-280)||(14650665-14650832)
chr4 (108-217)||(13036600-13036711)
chr4 (211-283)||(27533870-27533942)
chr4 (108-217)||(27995864-27995975)
chr4 (228-279)||(9556391-9556442)
chr4 (228-279)||(14757616-14757667)
chr4 (229-279)||(17810134-17810184)
chr4 (108-217)||(19738200-19738310)
chr4 (228-279)||(33742241-33742292)
chr4 (130-180)||(15880661-15880711)
chr4 (231-279)||(4561528-4561576)
chr4 (228-279)||(5757132-5757183)
chr4 (102-169)||(37838818-37838885)
chr4 (102-169)||(42597547-42597614)
chr4 (110-152)||(13592218-13592260)
chr4 (108-163)||(24047403-24047458)
chr4 (108-163)||(26045397-26045452)
chr4 (108-163)||(26050578-26050633)
chr4 (111-148)||(15791739-15791776)
chr4 (108-194)||(19734402-19734490)
chr4 (108-182)||(21061629-21061705)
chr4 (108-182)||(20662-20738)
chr4 (108-182)||(9871441-9871517)
chr4 (108-194)||(19435632-19435720)
chr4 (134-182)||(32467166-32467214)
chr4 (108-163)||(18212695-18212749)
chr4 (108-182)||(15612078-15612154)
chr4 (199-252)||(15990254-15990307)
chr4 (108-173)||(16278244-16278309)
chr4 (167-215)||(14184992-14185040)
[»] chr5 (28 HSPs)
chr5 (92-283)||(22107543-22107734)
chr5 (102-283)||(17010844-17011026)
chr5 (103-283)||(262979-263158)
chr5 (108-283)||(33895754-33895928)
chr5 (108-283)||(29447840-29448016)
chr5 (143-283)||(6765700-6765840)
chr5 (206-283)||(10753203-10753280)
chr5 (206-283)||(20911025-20911102)
chr5 (108-182)||(24212310-24212384)
chr5 (206-283)||(18356131-18356208)
chr5 (102-182)||(41861547-41861627)
chr5 (108-182)||(35852565-35852639)
chr5 (228-279)||(15237029-15237080)
chr5 (228-279)||(19472914-19472965)
chr5 (228-279)||(20295708-20295759)
chr5 (108-194)||(25250752-25250840)
chr5 (108-194)||(25314537-25314625)
chr5 (206-283)||(40723777-40723854)
chr5 (109-163)||(23469766-23469820)
chr5 (102-169)||(19076340-19076407)
chr5 (108-194)||(20469986-20470074)
chr5 (206-253)||(11220587-11220634)
chr5 (206-253)||(11225173-11225220)
chr5 (206-253)||(11228996-11229043)
chr5 (108-194)||(36509669-36509757)
chr5 (206-253)||(11230985-11231032)
chr5 (115-194)||(16227450-16227531)
chr5 (134-182)||(10953103-10953151)
[»] chr3 (81 HSPs)
chr3 (108-283)||(324071-324246)
chr3 (92-283)||(16796314-16796497)
chr3 (102-283)||(52989831-52990012)
chr3 (108-283)||(43889735-43889910)
chr3 (108-283)||(11914125-11914300)
chr3 (102-283)||(35961639-35961821)
chr3 (108-279)||(12469737-12469908)
chr3 (102-281)||(14965999-14966178)
chr3 (108-283)||(18700416-18700601)
chr3 (102-283)||(21837245-21837436)
chr3 (102-283)||(17691817-17692008)
chr3 (135-254)||(16979087-16979207)
chr3 (102-283)||(54876499-54876690)
chr3 (102-238)||(24513771-24513913)
chr3 (143-281)||(17046182-17046320)
chr3 (102-212)||(24178702-24178812)
chr3 (187-283)||(22652036-22652132)
chr3 (206-283)||(12339640-12339717)
chr3 (206-279)||(4588967-4589040)
chr3 (206-283)||(5223238-5223315)
chr3 (108-182)||(6808079-6808153)
chr3 (206-283)||(11300620-11300697)
chr3 (206-283)||(37439826-37439903)
chr3 (108-167)||(10542492-10542551)
chr3 (102-167)||(5841787-5841852)
chr3 (206-283)||(19775607-19775684)
chr3 (108-217)||(6805783-6805894)
chr3 (211-283)||(15964816-15964888)
chr3 (211-283)||(15968740-15968812)
chr3 (211-283)||(15972664-15972736)
chr3 (108-167)||(324017-324076)
chr3 (228-279)||(4111443-4111494)
chr3 (228-279)||(7109562-7109613)
chr3 (228-279)||(7113497-7113548)
chr3 (228-279)||(11069932-11069983)
chr3 (228-279)||(11165723-11165774)
chr3 (228-279)||(22321528-22321579)
chr3 (228-279)||(22336583-22336634)
chr3 (228-279)||(27409838-27409889)
chr3 (228-279)||(28949588-28949639)
chr3 (228-279)||(55022731-55022782)
chr3 (229-279)||(15617239-15617289)
chr3 (229-279)||(30065811-30065861)
chr3 (206-283)||(11854575-11854652)
chr3 (102-200)||(17685711-17685819)
chr3 (108-168)||(32403058-32403118)
chr3 (115-167)||(43889905-43889957)
chr3 (228-279)||(4107591-4107642)
chr3 (228-279)||(14499189-14499240)
chr3 (112-215)||(36527709-36527804)
chr3 (115-167)||(10542546-10542598)
chr3 (115-167)||(12469690-12469742)
chr3 (108-160)||(15245980-15246032)
chr3 (115-167)||(18700596-18700648)
chr3 (102-162)||(22651974-22652034)
chr3 (112-167)||(3265115-3265170)
chr3 (108-155)||(9577587-9577634)
chr3 (119-163)||(10834207-10834251)
chr3 (108-160)||(15206898-15206950)
chr3 (108-160)||(15265101-15265153)
chr3 (189-283)||(14569070-14569163)
chr3 (111-156)||(23318824-23318869)
chr3 (108-194)||(42353462-42353550)
chr3 (109-182)||(11886546-11886621)
chr3 (199-252)||(13026468-13026521)
chr3 (199-252)||(13030060-13030113)
chr3 (108-194)||(50348958-50349046)
chr3 (235-283)||(16643135-16643183)
chr3 (134-182)||(20417210-20417258)
chr3 (102-142)||(45220417-45220457)
chr3 (115-182)||(49970132-49970200)
chr3 (137-222)||(37037950-37038041)
chr3 (135-182)||(42325096-42325143)
chr3 (108-175)||(16044476-16044545)
chr3 (108-175)||(16049952-16050021)
chr3 (108-175)||(16059335-16059404)
chr3 (137-182)||(6158529-6158574)
chr3 (137-182)||(14642425-14642470)
chr3 (108-158)||(15565582-15565634)
chr3 (108-194)||(16728392-16728480)
chr3 (134-182)||(12512693-12512741)
[»] scaffold0434 (1 HSPs)
scaffold0434 (102-283)||(7050-7231)
[»] scaffold0022 (1 HSPs)
scaffold0022 (102-283)||(53947-54128)
[»] chr2 (43 HSPs)
chr2 (102-283)||(34874321-34874502)
chr2 (102-283)||(23707397-23707578)
chr2 (102-283)||(24917941-24918122)
chr2 (102-283)||(27472250-27472431)
chr2 (102-283)||(24670826-24671007)
chr2 (113-283)||(21081845-21082015)
chr2 (102-283)||(22459671-22459852)
chr2 (102-283)||(24681247-24681426)
chr2 (102-281)||(21914741-21914921)
chr2 (140-283)||(23069392-23069535)
chr2 (102-283)||(34492243-34492425)
chr2 (108-267)||(20320723-20320884)
chr2 (102-283)||(24316194-24316384)
chr2 (161-283)||(18358842-18358964)
chr2 (206-283)||(30345181-30345258)
chr2 (206-283)||(1283228-1283305)
chr2 (206-283)||(31345051-31345128)
chr2 (102-167)||(13101746-13101811)
chr2 (206-283)||(41531194-41531271)
chr2 (228-279)||(12901706-12901757)
chr2 (228-279)||(24628673-24628724)
chr2 (228-279)||(27601657-27601708)
chr2 (137-217)||(24815516-24815596)
chr2 (108-156)||(39828104-39828152)
chr2 (228-279)||(24649218-24649269)
chr2 (228-279)||(27379627-27379678)
chr2 (228-279)||(27383673-27383724)
chr2 (108-163)||(34136902-34136957)
chr2 (229-279)||(10101839-10101889)
chr2 (134-218)||(20915189-20915273)
chr2 (137-213)||(24834921-24834997)
chr2 (108-163)||(21073596-21073651)
chr2 (102-169)||(37379421-37379488)
chr2 (134-182)||(5985213-5985261)
chr2 (108-163)||(9241889-9241943)
chr2 (108-194)||(10897647-10897732)
chr2 (116-167)||(20320879-20320930)
chr2 (108-155)||(22252600-22252647)
chr2 (102-148)||(27485376-27485422)
chr2 (108-150)||(43947481-43947523)
chr2 (108-182)||(25045107-25045182)
chr2 (108-163)||(18547049-18547104)
chr2 (134-182)||(21367930-21367978)
[»] scaffold0484 (1 HSPs)
scaffold0484 (92-283)||(663-864)
[»] chr7 (76 HSPs)
chr7 (92-283)||(14258261-14258462)
chr7 (102-283)||(14981544-14981725)
chr7 (102-283)||(15112774-15112955)
chr7 (102-283)||(46580784-46580965)
chr7 (108-283)||(8940086-8940261)
chr7 (108-283)||(32301124-32301299)
chr7 (102-283)||(15719816-15720007)
chr7 (108-280)||(16323888-16324060)
chr7 (108-283)||(16579585-16579770)
chr7 (108-283)||(16585893-16586078)
chr7 (102-282)||(16550756-16550937)
chr7 (102-283)||(32160952-32161133)
chr7 (108-283)||(16460874-16461059)
chr7 (102-281)||(16998413-16998602)
chr7 (108-252)||(1490194-1490348)
chr7 (143-281)||(8468589-8468727)
chr7 (153-283)||(15411020-15411150)
chr7 (102-283)||(15116314-15116492)
chr7 (102-282)||(16614725-16614906)
chr7 (143-281)||(17232790-17232928)
chr7 (102-283)||(14273335-14273526)
chr7 (206-283)||(13918634-13918711)
chr7 (206-283)||(25927357-25927434)
chr7 (211-283)||(2530244-2530316)
chr7 (206-283)||(1858940-1859017)
chr7 (206-283)||(15084035-15084112)
chr7 (211-283)||(45170196-45170268)
chr7 (108-167)||(11392107-11392166)
chr7 (193-283)||(17060533-17060622)
chr7 (109-182)||(11084942-11085015)
chr7 (206-283)||(39722105-39722182)
chr7 (108-217)||(709377-709488)
chr7 (115-167)||(32301077-32301129)
chr7 (228-279)||(32968-33019)
chr7 (102-182)||(11092677-11092753)
chr7 (228-279)||(12704853-12704904)
chr7 (228-279)||(12714725-12714776)
chr7 (228-279)||(12718529-12718580)
chr7 (228-279)||(16114102-16114153)
chr7 (228-279)||(16117255-16117306)
chr7 (112-167)||(16461054-16461109)
chr7 (228-279)||(16907395-16907446)
chr7 (228-279)||(18283227-18283278)
chr7 (228-279)||(26292256-26292307)
chr7 (108-182)||(9320565-9320639)
chr7 (108-217)||(16462155-16462266)
chr7 (228-279)||(12723440-12723491)
chr7 (228-279)||(18279264-18279315)
chr7 (229-279)||(70959-71009)
chr7 (229-279)||(75068-75118)
chr7 (109-163)||(38519335-38519389)
chr7 (108-217)||(41055594-41055705)
chr7 (108-156)||(9033457-9033506)
chr7 (108-194)||(43277680-43277768)
chr7 (115-167)||(16579538-16579590)
chr7 (115-167)||(16586073-16586125)
chr7 (108-163)||(130921-130976)
chr7 (108-163)||(11661234-11661289)
chr7 (112-167)||(14157204-14157259)
chr7 (108-163)||(14421912-14421967)
chr7 (108-163)||(42461911-42461966)
chr7 (134-217)||(48811985-48812068)
chr7 (112-215)||(10501483-10501577)
chr7 (110-180)||(15281367-15281439)
chr7 (112-182)||(33001067-33001139)
chr7 (108-156)||(16996184-16996232)
chr7 (108-151)||(17232744-17232787)
chr7 (108-182)||(4070829-4070905)
chr7 (108-182)||(11053734-11053810)
chr7 (134-194)||(36705531-36705591)
chr7 (108-163)||(11525668-11525723)
chr7 (154-221)||(17071117-17071190)
chr7 (108-182)||(17130616-17130691)
chr7 (122-163)||(18607430-18607470)
chr7 (108-152)||(16185916-16185959)
chr7 (143-179)||(16185960-16185996)
[»] chr8 (46 HSPs)
chr8 (102-283)||(22238127-22238308)
chr8 (102-283)||(23478199-23478381)
chr8 (108-278)||(37515542-37515712)
chr8 (108-283)||(18833399-18833574)
chr8 (92-240)||(44384821-44384969)
chr8 (102-280)||(23409626-23409804)
chr8 (108-283)||(5760518-5760693)
chr8 (122-254)||(22352887-22353019)
chr8 (108-283)||(17461161-17461346)
chr8 (102-283)||(19879947-19880129)
chr8 (123-283)||(26453850-26454011)
chr8 (153-283)||(19808471-19808601)
chr8 (206-283)||(14397963-14398040)
chr8 (206-283)||(21410789-21410866)
chr8 (206-283)||(21805281-21805358)
chr8 (108-217)||(18302809-18302920)
chr8 (206-283)||(21828204-21828281)
chr8 (211-283)||(18862835-18862907)
chr8 (167-280)||(19929603-19929717)
chr8 (228-279)||(21976864-21976915)
chr8 (228-279)||(22111792-22111843)
chr8 (228-279)||(43251674-43251725)
chr8 (228-279)||(19278477-19278528)
chr8 (108-182)||(32807206-32807281)
chr8 (108-163)||(22253268-22253323)
chr8 (108-151)||(37515489-37515532)
chr8 (108-194)||(20084489-20084577)
chr8 (108-217)||(13665304-13665415)
chr8 (108-217)||(13724579-13724690)
chr8 (108-152)||(16799448-16799492)
chr8 (108-156)||(28397512-28397560)
chr8 (108-163)||(5083257-5083312)
chr8 (108-163)||(22381835-22381890)
chr8 (108-182)||(22244506-22244582)
chr8 (108-194)||(22259224-22259312)
chr8 (108-212)||(23669527-23669633)
chr8 (108-194)||(17217690-17217778)
chr8 (108-194)||(17907830-17907918)
chr8 (108-182)||(23947303-23947379)
chr8 (108-182)||(19699168-19699244)
chr8 (235-283)||(23659371-23659419)
chr8 (116-155)||(17438329-17438368)
chr8 (134-197)||(39695388-39695451)
chr8 (228-262)||(21972792-21972826)
chr8 (137-182)||(23888859-23888904)
chr8 (89-117)||(6759255-6759283)
[»] scaffold0741 (1 HSPs)
scaffold0741 (102-283)||(6861-7042)
[»] scaffold0032 (1 HSPs)
scaffold0032 (102-283)||(67092-67273)
[»] chr6 (63 HSPs)
chr6 (102-283)||(17377906-17378087)
chr6 (102-283)||(18913775-18913957)
chr6 (102-283)||(18937033-18937215)
chr6 (115-283)||(15705552-15705720)
chr6 (109-283)||(28104007-28104182)
chr6 (102-283)||(15174206-15174388)
chr6 (109-283)||(17743215-17743389)
chr6 (108-283)||(22805759-22805944)
chr6 (92-283)||(19773651-19773843)
chr6 (126-283)||(15817630-15817785)
chr6 (108-283)||(19656121-19656296)
chr6 (102-283)||(15875214-15875395)
chr6 (206-283)||(23414819-23414896)
chr6 (206-283)||(27416048-27416125)
chr6 (206-283)||(27556577-27556654)
chr6 (206-279)||(18917460-18917533)
chr6 (110-182)||(18927737-18927809)
chr6 (206-283)||(31478000-31478077)
chr6 (116-182)||(2201069-2201135)
chr6 (108-182)||(22420909-22420983)
chr6 (211-283)||(22948952-22949024)
chr6 (108-213)||(23083124-23083231)
chr6 (206-281)||(16760134-16760209)
chr6 (206-279)||(1644547-1644620)
chr6 (115-181)||(20182697-20182765)
chr6 (115-181)||(22153226-22153294)
chr6 (102-167)||(28708480-28708545)
chr6 (211-283)||(22952908-22952980)
chr6 (211-283)||(23871396-23871468)
chr6 (211-283)||(23875352-23875424)
chr6 (228-279)||(8243722-8243773)
chr6 (228-279)||(11566723-11566774)
chr6 (108-212)||(18260058-18260163)
chr6 (228-279)||(19870451-19870502)
chr6 (228-279)||(23394929-23394980)
chr6 (228-279)||(23989781-23989832)
chr6 (108-182)||(19829824-19829900)
chr6 (115-217)||(20411619-20411723)
chr6 (211-283)||(18955953-18956025)
chr6 (228-279)||(12619036-12619087)
chr6 (108-167)||(17743160-17743219)
chr6 (108-163)||(20078274-20078329)
chr6 (232-279)||(22862811-22862858)
chr6 (108-167)||(27573093-27573152)
chr6 (108-167)||(27573147-27573206)
chr6 (189-242)||(23538745-23538798)
chr6 (108-163)||(18453144-18453199)
chr6 (108-179)||(27573027-27573098)
chr6 (108-248)||(22376702-22376846)
chr6 (211-283)||(14472115-14472187)
chr6 (115-167)||(27573201-27573253)
chr6 (108-167)||(17105717-17105776)
chr6 (108-167)||(23538691-23538750)
chr6 (189-283)||(17105771-17105864)
chr6 (108-156)||(18896424-18896472)
chr6 (108-163)||(23838137-23838191)
chr6 (115-182)||(19399662-19399730)
chr6 (134-182)||(31735796-31735844)
chr6 (236-283)||(14979496-14979543)
chr6 (108-216)||(15895888-15895998)
chr6 (102-142)||(15687912-15687952)
chr6 (108-156)||(19362389-19362437)
chr6 (134-182)||(24551153-24551201)
[»] scaffold0599 (1 HSPs)
scaffold0599 (108-283)||(1401-1576)
[»] chr1 (44 HSPs)
chr1 (108-283)||(48520348-48520523)
chr1 (102-283)||(29764389-29764571)
chr1 (102-283)||(12271385-12271566)
chr1 (102-283)||(50000593-50000774)
chr1 (92-283)||(48603263-48603464)
chr1 (102-281)||(27653333-27653522)
chr1 (102-283)||(51326612-51326804)
chr1 (92-241)||(22131046-22131205)
chr1 (108-254)||(20316471-20316619)
chr1 (169-283)||(46198476-46198590)
chr1 (206-283)||(33797456-33797533)
chr1 (206-283)||(1925319-1925396)
chr1 (206-283)||(20924333-20924410)
chr1 (102-175)||(25263060-25263133)
chr1 (102-182)||(43630344-43630424)
chr1 (108-182)||(8882098-8882172)
chr1 (206-279)||(20229003-20229076)
chr1 (228-279)||(1010584-1010635)
chr1 (228-279)||(16375653-16375704)
chr1 (228-279)||(21407216-21407267)
chr1 (108-167)||(23967676-23967735)
chr1 (102-176)||(10492015-10492089)
chr1 (102-167)||(11809476-11809541)
chr1 (102-167)||(23072993-23073058)
chr1 (108-163)||(14800491-14800546)
chr1 (108-163)||(14809365-14809420)
chr1 (108-167)||(20958070-20958129)
chr1 (108-163)||(21043385-21043440)
chr1 (108-167)||(48520294-48520353)
chr1 (228-279)||(52639402-52639453)
chr1 (109-215)||(636042-636158)
chr1 (108-167)||(20316417-20316476)
chr1 (108-163)||(28312476-28312531)
chr1 (232-283)||(13881490-13881541)
chr1 (108-182)||(45754559-45754635)
chr1 (111-152)||(47190566-47190607)
chr1 (108-163)||(20438097-20438152)
chr1 (108-155)||(22124247-22124294)
chr1 (108-194)||(7052908-7052997)
chr1 (108-182)||(24726428-24726503)
chr1 (137-194)||(38057514-38057571)
chr1 (134-182)||(8276865-8276913)
chr1 (134-182)||(51476108-51476156)
chr1 (108-194)||(13301891-13301979)
[»] scaffold0011 (3 HSPs)
scaffold0011 (108-283)||(125782-125967)
scaffold0011 (115-167)||(125735-125787)
scaffold0011 (108-152)||(38266-38310)
[»] scaffold0020 (1 HSPs)
scaffold0020 (102-283)||(169858-170039)
[»] scaffold0462 (1 HSPs)
scaffold0462 (102-283)||(10340-10521)
[»] scaffold0317 (1 HSPs)
scaffold0317 (102-283)||(7011-7192)
[»] scaffold0076 (1 HSPs)
scaffold0076 (102-283)||(24706-24885)
[»] scaffold0025 (1 HSPs)
scaffold0025 (102-254)||(78234-78386)
[»] scaffold1283 (1 HSPs)
scaffold1283 (108-283)||(1359-1534)
[»] scaffold0515 (1 HSPs)
scaffold0515 (112-279)||(4160-4327)
[»] scaffold0306 (2 HSPs)
scaffold0306 (112-279)||(4160-4327)
scaffold0306 (117-283)||(14843-15009)
[»] scaffold0452 (2 HSPs)
scaffold0452 (108-278)||(13490-13670)
scaffold0452 (125-167)||(13665-13707)
[»] scaffold0877 (1 HSPs)
scaffold0877 (102-283)||(2822-3013)
[»] scaffold1783 (1 HSPs)
scaffold1783 (122-281)||(268-427)
[»] scaffold0034 (5 HSPs)
scaffold0034 (140-283)||(119877-120020)
scaffold0034 (108-165)||(117193-117250)
scaffold0034 (108-165)||(117139-117196)
scaffold0034 (113-158)||(119802-119847)
scaffold0034 (115-151)||(119842-119878)
[»] scaffold0058 (1 HSPs)
scaffold0058 (131-283)||(5606-5759)
[»] scaffold0125 (1 HSPs)
scaffold0125 (102-283)||(1983-2174)
[»] scaffold0009 (2 HSPs)
scaffold0009 (143-281)||(85417-85555)
scaffold0009 (108-151)||(85371-85414)
[»] scaffold0138 (1 HSPs)
scaffold0138 (127-283)||(33061-33218)
[»] scaffold0123 (1 HSPs)
scaffold0123 (109-283)||(365-549)
[»] scaffold0780 (1 HSPs)
scaffold0780 (102-283)||(3436-3627)
[»] scaffold0057 (1 HSPs)
scaffold0057 (102-281)||(70581-70754)
[»] scaffold0046 (3 HSPs)
scaffold0046 (124-283)||(22520-22680)
scaffold0046 (108-156)||(17027-17075)
scaffold0046 (108-148)||(26147-26187)
[»] scaffold0017 (2 HSPs)
scaffold0017 (122-283)||(1274-1435)
scaffold0017 (122-283)||(8025-8186)
[»] scaffold0156 (1 HSPs)
scaffold0156 (108-283)||(15568-15753)
[»] scaffold0359 (1 HSPs)
scaffold0359 (108-280)||(15417-15591)
[»] scaffold0278 (2 HSPs)
scaffold0278 (108-273)||(7670-7837)
scaffold0278 (108-167)||(7616-7675)
[»] scaffold0107 (4 HSPs)
scaffold0107 (143-283)||(10193-10333)
scaffold0107 (108-163)||(36142-36197)
scaffold0107 (109-198)||(10493-10584)
scaffold0107 (246-283)||(15523-15560)
[»] scaffold0096 (2 HSPs)
scaffold0096 (108-283)||(21018-21178)
scaffold0096 (108-167)||(20964-21023)
[»] scaffold0018 (2 HSPs)
scaffold0018 (140-243)||(20671-20774)
scaffold0018 (137-217)||(7490-7570)
[»] scaffold0019 (2 HSPs)
scaffold0019 (102-214)||(21782-21894)
scaffold0019 (108-163)||(132879-132933)
[»] scaffold0747 (1 HSPs)
scaffold0747 (186-283)||(474-571)
[»] scaffold0165 (2 HSPs)
scaffold0165 (92-200)||(3514-3632)
scaffold0165 (92-200)||(7578-7696)
[»] scaffold0299 (1 HSPs)
scaffold0299 (206-283)||(6854-6931)
[»] scaffold0293 (1 HSPs)
scaffold0293 (206-283)||(20319-20396)
[»] scaffold0003 (1 HSPs)
scaffold0003 (206-283)||(71236-71313)
[»] scaffold0051 (1 HSPs)
scaffold0051 (206-283)||(31058-31135)
[»] scaffold0500 (1 HSPs)
scaffold0500 (108-280)||(7512-7679)
[»] scaffold0290 (2 HSPs)
scaffold0290 (159-283)||(41-171)
scaffold0290 (143-175)||(17-49)
[»] scaffold0802 (1 HSPs)
scaffold0802 (112-182)||(5623-5693)
[»] scaffold0335 (1 HSPs)
scaffold0335 (112-182)||(720-790)
[»] scaffold0577 (1 HSPs)
scaffold0577 (102-179)||(7763-7840)
[»] scaffold0415 (1 HSPs)
scaffold0415 (206-283)||(234-311)
[»] scaffold0229 (1 HSPs)
scaffold0229 (206-283)||(11691-11768)
[»] scaffold0016 (1 HSPs)
scaffold0016 (206-283)||(207692-207769)
[»] scaffold0117 (1 HSPs)
scaffold0117 (224-283)||(39205-39264)
[»] scaffold0338 (1 HSPs)
scaffold0338 (108-283)||(11577-11757)
[»] scaffold0157 (1 HSPs)
scaffold0157 (206-283)||(32850-32927)
[»] scaffold0031 (1 HSPs)
scaffold0031 (206-283)||(36276-36353)
[»] scaffold0012 (2 HSPs)
scaffold0012 (206-283)||(189567-189644)
scaffold0012 (116-163)||(221310-221357)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-179)||(362728-362805)
[»] scaffold0141 (1 HSPs)
scaffold0141 (206-281)||(14279-14354)
[»] scaffold0005 (1 HSPs)
scaffold0005 (108-280)||(166460-166627)
[»] scaffold0679 (1 HSPs)
scaffold0679 (102-167)||(2658-2723)
[»] scaffold0436 (2 HSPs)
scaffold0436 (102-167)||(7987-8052)
scaffold0436 (167-215)||(8044-8092)
[»] scaffold0001 (2 HSPs)
scaffold0001 (108-218)||(446445-446557)
scaffold0001 (108-156)||(497388-497436)
[»] scaffold0561 (1 HSPs)
scaffold0561 (102-215)||(10429-10534)
[»] scaffold0372 (1 HSPs)
scaffold0372 (228-279)||(5295-5346)
[»] scaffold0349 (1 HSPs)
scaffold0349 (228-279)||(12283-12334)
[»] scaffold0061 (1 HSPs)
scaffold0061 (228-279)||(67495-67546)
[»] scaffold0037 (2 HSPs)
scaffold0037 (206-265)||(80562-80621)
scaffold0037 (244-283)||(80525-80564)
[»] scaffold0029 (3 HSPs)
scaffold0029 (228-279)||(61806-61857)
scaffold0029 (228-279)||(65722-65773)
scaffold0029 (206-279)||(80554-80627)
[»] scaffold0028 (1 HSPs)
scaffold0028 (228-279)||(58913-58964)
[»] scaffold0065 (1 HSPs)
scaffold0065 (108-215)||(54973-55082)
[»] scaffold0073 (1 HSPs)
scaffold0073 (122-280)||(56824-56977)
[»] scaffold0098 (1 HSPs)
scaffold0098 (108-217)||(39218-39329)
[»] scaffold0676 (1 HSPs)
scaffold0676 (228-279)||(311-362)
[»] scaffold0247 (1 HSPs)
scaffold0247 (102-169)||(47-114)
[»] scaffold0109 (1 HSPs)
scaffold0109 (217-283)||(36132-36198)
[»] scaffold0083 (3 HSPs)
scaffold0083 (108-182)||(809-885)
scaffold0083 (108-182)||(6113-6189)
scaffold0083 (108-182)||(11580-11656)
[»] scaffold0525 (1 HSPs)
scaffold0525 (229-277)||(4071-4119)
[»] scaffold0347 (1 HSPs)
scaffold0347 (108-156)||(8852-8900)
[»] scaffold0074 (1 HSPs)
scaffold0074 (115-163)||(8130-8178)
[»] scaffold0396 (1 HSPs)
scaffold0396 (108-163)||(1856-1911)
[»] scaffold0282 (1 HSPs)
scaffold0282 (108-163)||(18271-18326)
[»] scaffold0026 (1 HSPs)
scaffold0026 (134-217)||(21228-21311)
[»] scaffold0014 (2 HSPs)
scaffold0014 (102-161)||(77818-77877)
scaffold0014 (112-167)||(126868-126923)
[»] scaffold0331 (1 HSPs)
scaffold0331 (108-248)||(12923-13067)
[»] scaffold0151 (1 HSPs)
scaffold0151 (108-182)||(24267-24343)
[»] scaffold0149 (1 HSPs)
scaffold0149 (108-194)||(20752-20840)
[»] scaffold0716 (1 HSPs)
scaffold0716 (108-181)||(1000-1074)
[»] scaffold0485 (1 HSPs)
scaffold0485 (108-156)||(10125-10173)
[»] scaffold0108 (2 HSPs)
scaffold0108 (108-163)||(3219-3274)
scaffold0108 (108-182)||(5518-5594)
[»] scaffold0010 (1 HSPs)
scaffold0010 (108-163)||(609-664)
[»] scaffold0042 (2 HSPs)
scaffold0042 (115-182)||(28389-28458)
scaffold0042 (108-194)||(47423-47511)
[»] scaffold0170 (2 HSPs)
scaffold0170 (108-194)||(2627-2715)
scaffold0170 (108-155)||(2918-2965)
[»] scaffold0439 (1 HSPs)
scaffold0439 (134-194)||(11299-11359)
[»] scaffold0106 (1 HSPs)
scaffold0106 (112-156)||(19756-19800)
[»] scaffold0075 (1 HSPs)
scaffold0075 (108-182)||(60361-60437)
[»] scaffold1539 (2 HSPs)
scaffold1539 (108-155)||(900-947)
scaffold1539 (108-175)||(609-678)
[»] scaffold0914 (1 HSPs)
scaffold0914 (108-155)||(1663-1710)
[»] scaffold0445 (1 HSPs)
scaffold0445 (110-182)||(2806-2880)
[»] scaffold0409 (2 HSPs)
scaffold0409 (108-180)||(330-404)
scaffold0409 (108-180)||(8585-8659)
[»] scaffold0337 (1 HSPs)
scaffold0337 (108-163)||(9824-9878)
[»] scaffold1815 (1 HSPs)
scaffold1815 (108-194)||(1126-1215)
[»] scaffold0328 (1 HSPs)
scaffold0328 (108-182)||(19519-19592)
[»] scaffold0207 (1 HSPs)
scaffold0207 (108-194)||(15362-15450)
[»] scaffold0072 (1 HSPs)
scaffold0072 (108-156)||(57780-57828)
[»] scaffold0002 (1 HSPs)
scaffold0002 (134-182)||(397625-397673)
[»] scaffold0379 (2 HSPs)
scaffold0379 (108-175)||(4668-4737)
scaffold0379 (108-175)||(14714-14783)
[»] scaffold0589 (1 HSPs)
scaffold0589 (108-182)||(3371-3447)
[»] scaffold0321 (1 HSPs)
scaffold0321 (134-179)||(880-925)
[»] scaffold0220 (1 HSPs)
scaffold0220 (108-182)||(17513-17589)
[»] scaffold0630 (1 HSPs)
scaffold0630 (154-182)||(8213-8241)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 92 - 283
Target Start/End: Complemental strand, 17048434 - 17048243
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  17048434 acatcatcatcttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaa 17048335  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17048334 cttgatcaatattcaacaacaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 17048243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 14746867 - 14746692
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  14746867 caacttagacaacattaacaacttaagactccaatactttggaaagaaaacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 14746768  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  14746767 caacaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 14746692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 13592209 - 13592034
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||||||||||||||    
T  13592209 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactctacaacttagaccaacaccttcaacttgatcaatattcaa 13592110  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||| ||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  13592109 cagcaacagaaacagcacaagcaattcacaacatatcaatattaatgaaaagcatcatcaacttaaacatcataca 13592034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 10695173 - 10694998
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattca 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  10695173 caacttagacaacatcaa-aacttaagactccaatactttggaacgacaacttacaacttggacaacttaaaccaacatctgcaacttgatcaatattca 10695075  T
Q  207 acaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||    
T  10695074 acagcaacagaaacagcacaagcaattcacaacataacaatattaatgaaaaatatcaacaacttaaacatcataca 10694998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 10908939 - 10908764
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattca 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  10908939 caacttagacaacatcaa-aacttaagactccaatactttggaacgacaacttacaacttggacaacttaaaccaacatctgcaacttgatcaatattca 10908841  T
Q  207 acaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||    
T  10908840 acagcaacagaaacagcacaagcaattcacaacataacaatattaatgaaaaatatcaacaacttaaacatcataca 10908764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 26013312 - 26013495
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  26013312 cttcaacaacttagacaacattaacaacttaagaatccaatactttggaaagacaacttacaactttacaacttaaaccaacatctgcaacttgatcaat 26013411  T
Q  202 attcaa--caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||  || ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||    
T  26013412 atgcaacccagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaagcatcataca 26013495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 53631540 - 53631365
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  53631540 caacttggacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaacttagaccaacacttgcaacttgatcaatattcaa 53631441  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||| |||||||||||||| |||||||||||||| |  || || | ||||||| |||||||||||    
T  53631440 cagcaacagaaacagcacaagcaattcacatcataacaatattaacgataaacaaccacaacttcaacatcataca 53631365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 15497326 - 15497144
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||||| ||||| ||||||||||| |||||    
T  15497326 cttcaacaatttagacaacatcaacaacttaagactccaatactttggaaggaaaacttacaacttagacaacttaaaccaacatctgcaacttaatcaa 15497227  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||  |||| |||||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  15497226 tattcaacagcaacagaaacatcacaatcaattctcaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 15497144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 15884348 - 15884166
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||  ||| |||| ||||| |||||||||||||||||    
T  15884348 cttcaacaacttagacaacatcaacaacttaagattccaataatttggaacgacaacttacgacttagacatcttaaaccaacatctgcaacttgatcaa 15884249  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||  ||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||    
T  15884248 tattcaacatcaacagaaacaacacaagcaattctcaacataacaatattaatgaaaatcatcaacaacttaaacatcataca 15884166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 123 - 283
Target Start/End: Original strand, 15008105 - 15008266
Alignment:
Q  123 caacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaaca 221  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  15008105 caacaacgtaagactccaatactttgaaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaatattcaacagcaacagaaaca 15008204  T
Q  222 gtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    | ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  15008205 gcacaagcaattcacaacatatcaatattaatgaaaagcatcaacaacttaaacatcataca 15008266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 40619662 - 40619831
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |      ||||||| ||||| ||||||||||||||||||||||||    
T  40619662 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaga------caacttaaaccaacatctgcaacttgatcaatattcaa 40619755  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||  ||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||| |||||||| ||||    
T  40619756 cagtaacagaaacagcacaagcaattcacaacataaaaatattaatgaaaagcatcaacaacctaaacatcttaca 40619831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 43256344 - 43256267
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43256344 aacagcaacagaaacagcacaagcaattcacaacatatcaatattaatgtgaagcatcaacaacttaaacatcataca 43256267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 9923210 - 9923282
Alignment:
Q  110 acttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9923210 acttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaa 9923282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 19857417 - 19857531
Alignment:
Q  167 ttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaac 266  Q
    |||||||||| ||||| | ||||| | |||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||||  || |||||||    
T  19857417 ttacaacttaaaccaacacctgcatcctgatcaatatgcaacagcaacagaaacagtacaagtaattcacaacatgacaatattaatgaaaaacatcaac 19857516  T
Q  267 aacttaaacatcata 281  Q
    |||||||| ||||||    
T  19857517 aacttaaatatcata 19857531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 10712695 - 10712772
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  10712695 aacagcaacagaaacagcacaagcaattcacaacacaacaatattaatatgaagtatcaacaacttaaacatcataca 10712772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 10926465 - 10926542
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  10926465 aacagcaacagaaacagcacaagcaattcacaacacaacaatattaatatgaagtatcaacaacttaaacatcataca 10926542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 12487550 - 12487627
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  12487550 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaatttaaacatcataca 12487627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 11479649 - 11479577
Alignment:
Q  110 acttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  11479649 acttagacaacattaacaacttaagactccaatactttagagagacaacttacaactttacaacttagaccaa 11479577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 14954429 - 14954357
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  14954429 caacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 14954357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 15365022 - 15365133
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  15365022 caacttggacaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 15365121  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  15365122 aacaacaacaga 15365133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 25689714 - 25689786
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  25689714 caacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 25689786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 14650665 - 14650832
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| |||||||||||||| |||| | ||||||||||||||||||||| |||||||||        ||||||| |  |||| |||||  |||||||||    
T  14650665 caacttggacaacatcaacaatttaataatccaatactttggaacgacaagttacaactt--------agaccaacacttgcagcttgactaatattcaa 14650756  T
Q  208 caacaacag-aaacagtaca--agcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    ||||||||| ||| || |||  ||||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||    
T  14650757 caacaacaggaaatagcacataagcaattcacagcataacaatatcaatgataagcatcaacaacttcaacatcat 14650832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 13036711 - 13036600
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| |||||||||||||| |||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  13036711 caacttggacaacatcaacaaattatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 13036612  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  13036611 aacaacaacaga 13036600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 27533870 - 27533942
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||| |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  27533870 caacagaaacagcacatgcaattcacaacataacaatattattatgaagtatcaacaacttaaacatcataca 27533942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 27995864 - 27995975
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||  ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  27995864 caacttggacaacatcaacaacttatatgactccaatactttggaataacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 27995963  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  27995964 aacaacaacaga 27995975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 9556391 - 9556442
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9556391 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 9556442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 14757667 - 14757616
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14757667 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 14757616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 17810134 - 17810184
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17810134 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 17810184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 19738200 - 19738310
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||| ||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  ||||||||||| |||||||    
T  19738200 caacttggacaacatcgacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttgattaatattc 19738299  T
Q  206 aacaacaacaga 217  Q
    || |||||||||    
T  19738300 aa-aacaacaga 19738310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 33742241 - 33742292
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33742241 gcaattcacagcataacaatattaatgtgaagcatcaacaacttaaacatca 33742292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 15880661 - 15880711
Alignment:
Q  130 ttaagactccaatactttggaacgacaacttacaactttacaacttagacc 180  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15880661 ttaagactccaatactttggaaagacaacttacaactttacaacttagacc 15880711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 4561576 - 4561528
Alignment:
Q  231 attcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4561576 attcacaacataacattattaatgtgaagcatcaacaacttaaacatca 4561528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 5757183 - 5757132
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  5757183 gcaatccacaacataacaatattaatgtgaagcaccaacaacttaaacatca 5757132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 37838885 - 37838818
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttta 169  Q
    ||||| ||||||| ||||||| ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  37838885 cttcaacaacttaaacaacattaacaacttaagactctaattctttggaaagacaacttacaacttta 37838818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 42597614 - 42597547
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttta 169  Q
    ||||| ||||||| ||||||| ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  42597614 cttcaacaacttaaacaacattaacaacttaagactctaattctttggaaagacaacttacaacttta 42597547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 13592260 - 13592218
Alignment:
Q  110 acttagacaacatcaacaacttaagactccaatactttggaac 152  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13592260 acttagacaacatcaacaacttaagactccaatactttggaac 13592218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 24047458 - 24047403
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | |||||||||||||||||||||||||||||||||||||| | ||||||    
T  24047458 caacttggtcaacatcaacaacttaagactccaatactttggaacgaaatcttaca 24047403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 26045452 - 26045397
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  26045452 caacttggacaacatcaacaacttaggactccaacactttggaacgacatcttaca 26045397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 26050633 - 26050578
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  26050633 caacttggacaacatcaacaacttaggactccaacactttggaacgacatcttaca 26050578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 15791739 - 15791776
Alignment:
Q  111 cttagacaacatcaacaacttaagactccaatactttg 148  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15791739 cttagacaacatcaacaacttaagactccaatactttg 15791776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 19734402 - 19734490
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  ||||||| |||||||||||||| ||||||| |||||  || ||||||||    
T  19734402 caacttagacaacttcaacaactcatatgactccaatatcttggaacaacaacttacaacttgacaactttgaccatcatatgcaactt 19734490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 21061629 - 21061705
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||   || ||||||| |||| ||| ||||||||||||||| |||||||||||||    
T  21061629 caacttagacaacttcaacaacttatatgaatccaatattttgaaacaacaacttacaactttgcaacttagaccaa 21061705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 20662 - 20738
Alignment:
Q  108 caacttagacaacatcaacaactta-agac-tccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| ||||||||||| | || |||||||  ||||||  |||||||||||||||||||||||||||||    
T  20662 caacttagacaacttcaacaacttatatacctccaatatcttggaataacaacttacaactttacaacttagaccaa 20738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 9871517 - 9871441
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||| |||| |||||||||||||   ||||||||||||||||||  ||| |||||||||||  ||||||||||||    
T  9871517 caacttggacaccatcaacaacttatatgactccaatactttggaaaaacatcttacaactttgtaacttagaccaa 9871441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 19435720 - 19435632
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    |||||| ||||||||||||||||||   ||||||||||  ||||||| |||||||||||||| |||| || ||| || || ||||||||    
T  19435720 caacttggacaacatcaacaacttatatgactccaatatcttggaacaacaacttacaacttgacaaatttgactaacatatgcaactt 19435632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 32467214 - 32467166
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  32467214 gactccaatatcttggaataacaacttacaactttacaacttagaccaa 32467166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 18212695 - 18212749
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | ||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  18212695 caacttggtcaacatcgacaacttaagactccaatactttgg-acgacatcttaca 18212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 15612078 - 15612154
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||| ||||   ||||||||||  ||||| |  ||||||||||||||||||| ||||||||    
T  15612078 caacttagacaacttcaacatcttatatgactccaatatcttggagcatcaacttacaactttacaacctagaccaa 15612154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 15990254 - 15990307
Alignment:
Q  199 aatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||| ||||||||| ||||||||  ||||||||||||||  |||||||||||||    
T  15990254 aataatcaacaacagcagaaacaacacaagcaattcacattataacaatattaa 15990307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 16278309 - 16278244
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaac 173  Q
    |||||| | ||||||||||||| || ||||||| ||||| | ||||||||||| |||| |||||||    
T  16278309 caacttggtcaacatcaacaacctatgactccattacttagaaacgacaacttgcaaccttacaac 16278244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 14184992 - 14185040
Alignment:
Q  167 ttacaacttagaccaatatctgcaacttgatcaatattcaacaacaaca 215  Q
    |||||||||||||||| | |||||| ||||||||||| ||||| |||||    
T  14184992 ttacaacttagaccaacacctgcaatttgatcaatatacaacagcaaca 14185040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 3e-85; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 92 - 283
Target Start/End: Complemental strand, 22107734 - 22107543
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  22107734 acatcattatcttcaaaaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaa 22107635  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22107634 cttgatcaatattcaacagcaacagaaacagcacaagcaattcacaacataacaatattaatgagaagcatcaacaacttaaacatcataca 22107543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 17010844 - 17011026
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| ||||| |||||||||||||||||    
T  17010844 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacggcaacttacaacttagacaacttaaaccaacatctgcaacttgatcaa 17010943  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  17010944 tattcaacagcaacagaagcagcacaagcaattcacaacataacaatattaatgaaaaacatcaacaacttaaacatcataca 17011026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 103 - 283
Target Start/End: Original strand, 262979 - 263158
Alignment:
Q  103 ttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaata 202  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||| ||||||||||||| |||    
T  262979 ttcaacaacttagacaactt-aacaacttaagactccaatactttggaaagacaacttacatttttacaacttagacctatacctgcaacttgatctata 263077  T
Q  203 ttcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  263078 tgcaacaacaacagaaacagcacaagcaattcacaacataacaatattaatgaaaaacatcaacaacttaaacatcataca 263158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 33895928 - 33895754
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| |||    
T  33895928 caacttggacaacatca-caacttaagactccaatactttggaacaacaacttacgactttacaacttagaccaatacctgcaacttgatcaatatgcaa 33895830  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| |||||| ||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  33895829 cagcaacataaacagcacaagcagttcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 33895754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 29447840 - 29448016
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  29447840 caacttagacaacatcaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttaatcaatactcaa 29447939  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaa-caacttaaacatcataca 283  Q
    || |||||| | ||  |||||||||||||||||||||||||||||||  ||||||||| ||| |||||||| |||||    
T  29447940 catcaacaggagcaacacaagcaattcacaacataacaatattaatgaaaagcatcaatcaatttaaacattataca 29448016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 143 - 283
Target Start/End: Original strand, 6765700 - 6765840
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||| |||||||||||||||||||||||||||||| |  |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  6765700 actttggaaagacaacttacaactttacaacttagaccaacacatgcatcttgatcaatatgcaacagcaacagaaacagtacaagcaattcacaacata 6765799  T
Q  243 acaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||  ||| |||||||||||||||||||||||    
T  6765800 acaatattaatgaaaagtatcaacaacttaaacatcataca 6765840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 10753203 - 10753280
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  10753203 aacaacaacagaaacagcacaagcaattcacaacatagcaatattaatatgaagtatcaacaacttaaacatcataca 10753280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 20911102 - 20911025
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20911102 aacagcaacagaaacaacacaaacaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 20911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 24212310 - 24212384
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  24212310 caacgtagacaacattaacaacttaagactccaatactttgaaaagacaacttacaactttacaacttagaccaa 24212384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 18356131 - 18356208
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18356131 aacagcaacagaaacatcacaaacaattcacaacataacaatattaatgtgaagcatcaacaactcaaacatcataca 18356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 41861627 - 41861547
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||    
T  41861627 cttcaacaacttagacaacattaacaacttaagattccaatactttggaaagacaacttacaattttacaaattagaccaa 41861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 35852565 - 35852639
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  35852565 caacgtagacaacattaacaacttaagactccaatactttgaaaagacaacttacaactttacaaattagaccaa 35852639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 15237080 - 15237029
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15237080 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 15237029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 19472965 - 19472914
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19472965 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 19472914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 20295708 - 20295759
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20295708 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 20295759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 25250840 - 25250752
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||||   ||||||||||  ||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  25250840 caacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaacatttgcaactt 25250752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 25314625 - 25314537
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||||   ||||||||||  ||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  25314625 caacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaacatttgcaactt 25314537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 40723854 - 40723777
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||  ||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||    
T  40723854 aacagcaacagaaacaacacaagcaattcacaacataacaatactattatgaagtatcaacaacttaaacatcataca 40723777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 23469766 - 23469820
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23469766 aacttagacaacatcaacaacttaagactccaacactttggaacgacatcttaca 23469820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 19076340 - 19076407
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttta 169  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||||||  |||| |||||||||||    
T  19076340 cttcaacaacttaaacaacattaacaacttaagactccaatactttggaaaaacaatttacaacttta 19076407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 20470074 - 20469986
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||||   ||||||| || |||||||| ||||||||||||||| |||||| |||||| || ||||||||    
T  20470074 caacttagacaacttcaacaacttatacgactccagtattttggaacaacaacttacaactttgcaactttgaccaacatttgcaactt 20469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 11220587 - 11220634
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaat 253  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  11220587 aacagcaacagaaacagcacaagcaattcacaacataacaatattaat 11220634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 11225173 - 11225220
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaat 253  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  11225173 aacagcaacagaaacagcacaagcaattcacaacataacaatattaat 11225220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 11228996 - 11229043
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaat 253  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  11228996 aacagcaacagaaacagcacaagcaattcacaacataacaatattaat 11229043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 36509757 - 36509669
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  ||||||| |||||||||||||| ||||||| ||| || || ||||||||    
T  36509757 caacttagacaacttcaacaactcatatgactccaatatcttggaacaacaacttacaacttgacaactttgactaacatatgcaactt 36509669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 11230985 - 11231032
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaat 253  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  11230985 aacagcaacagaaacaacacaagcaattcacaacataacaatattaat 11231032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 194
Target Start/End: Original strand, 16227450 - 16227531
Alignment:
Q  115 gacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||||||  || ||||||||||  ||||||| |||||||| ||||| ||||||| ||| || || ||||||||    
T  16227450 gacaacatcaacaacttatatgactccaatatcttggaacaacaacttaaaacttgacaactttgactaacatatgcaactt 16227531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 10953103 - 10953151
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||   ||||||||||||||||||||||||||||    
T  10953103 gactccaatatcttggaatatcaacttacaactttacaacttagaccaa 10953151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 324071 - 324246
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  324071 caacttagacaacatcgacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaa 324170  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  324171 cagcaacagaaacagcacaagcaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 324246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 92 - 283
Target Start/End: Original strand, 16796314 - 16796497
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| | ||||||    
T  16796314 acatcatcatcttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttac--------aacttagaccaacacctgcaa 16796405  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16796406 cttgatcaatattcaacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 16796497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 52990012 - 52989831
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  52990012 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 52989913  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  52989912 atgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 52989831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 43889910 - 43889735
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  43889910 caacttagataacatcaacaacttaagactccaatactttggaacgacaacttacaattttacaacttagaccaacacctgcaacttgatcaatattcaa 43889811  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  43889810 cagcaacagaaacaacacaagcaattcacaacataacaatattaatgagagacatcaacaacttaaacatcataca 43889735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 11914300 - 11914125
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  11914300 caacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 11914201  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||    
T  11914200 cagcaacaaaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaactttaacatcataca 11914125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 35961821 - 35961639
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  35961821 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaa 35961722  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||  || ||||||||||||||||||||||||    
T  35961721 tattcaacagcaacagaaacagcacaagcaattctcaacataaaaatattaatgaaaaacatcaacaacttaaacatcataca 35961639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 108 - 279
Target Start/End: Original strand, 12469737 - 12469908
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||    
T  12469737 caacttagacaacatcaacaacttaagactccaatacttttgaacgacaacttacaactttacaacttagaccaacacctgcaactttataaatattcaa 12469836  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    || ||||| |||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12469837 cagcaacaaaaacaacacaaccaattcacaacataacaatattaatgagaagcatcaacaacttaaacatca 12469908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 14965999 - 14966178
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| | ||||||||||||||||    
T  14965999 cttcaacaacttagacaacattgacaacttaagactccaatactttggaaagtaaacttacaactttacaacttagaccaacacctgcaacttgatcaat 14966098  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    || ||||| ||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  14966099 atgcaacagcaacagaaacagtacaaacaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcata 14966178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 18700601 - 18700416
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa----------cgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| ||| | ||||||||||||    
T  18700601 caacttagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagatcaacacctgcaacttgat 18700502  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    | |||||||||| |||||||||||| || |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  18700501 ctatattcaacagcaacagaaacagcactagcaattcacaacataacaatattaatgagaaacatcaaaaacttaaacatcataca 18700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 21837245 - 21837436
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| |||  |||    
T  21837245 cttcaacaacttagataatatcaacaacttaagactccaatactttggaacattttggaaagacaacttacaactttacaacttagaccaacatcaacaa 21837344  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||| |||  ||||||||||||| |||||||||||||    
T  21837345 cttgatcaatattcaacagcaacagaaacagtacaagtcattcacaacataataatattcatgaaaagcatcaacaacataaacatcataca 21837436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 17692008 - 17691817
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||          |||||||||||||||||||||||||| ||| | ||||||    
T  17692008 cttcaacaacttagacaacattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagatcaacacctgcaa 17691909  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||  ||||||||||||||| |  | || ||||||||||||||||||||||    
T  17691908 cttgatcattatgcaacagcaacagaaacagtacaagcaattcaacacataacaatattaacgaaatgcgtcaacaacttaaacatcataca 17691817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 16979087 - 16979207
Alignment:
Q  135 actccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaatt 233  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16979087 actccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaatattcaacagcaacagaaacagcacaagcaatt 16979186  T
Q  234 cacaacataacaatattaatg 254  Q
    |||||||||||||||||||||    
T  16979187 cacaacataacaatattaatg 16979207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 54876690 - 54876499
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaat----------actttggaacgacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||| ||||||||| |||||||||||||| ||||          ||||||||| |||||||||||||||||||||||||| ||| | ||||||    
T  54876690 cttcaacaactcagacaacattaacaacttaagacttcaatattttggaacactttggaaagacaacttacaactttacaacttagatcaacacctgcaa 54876591  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||| |  | || ||||||||||||||||||||||    
T  54876590 cttgatcattatgcaacagcaacagaaacagtacaagcaatttacaacataacaatattaaggaaatgcgtcaacaacttaaacatcataca 54876499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 24513771 - 24513913
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  24513771 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttaccacttagaccaacacctgcaacttgatcaat 24513870  T
Q  202 at------tcaacaacaacagaaacagtacaagcaattcacaa 238  Q
    ||       ||||| ||||||||||||||||||||||||||||    
T  24513871 atgcaacagcaacagcaacagaaacagtacaagcaattcacaa 24513913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 17046182 - 17046320
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  17046182 actttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacagaaacagtacaatcaattcacatcata 17046281  T
Q  243 acaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    |||||||||| |  || || | ||||||| |||||||||    
T  17046282 acaatattaacgataaacaaccacaacttcaacatcata 17046320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 24178812 - 24178702
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||| || || |||    
T  24178812 cttcaacaacttagacaacatcaacaccttaagactccaatactttggaaagacaacttacaactttacaacttaaaccaacacctgcaaattaattaat 24178713  T
Q  202 attcaacaaca 212  Q
    |||||||||||    
T  24178712 attcaacaaca 24178702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 22652036 - 22652132
Alignment:
Q  187 tgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  22652036 tgcaacttgatcaatatgcaacaacaacagaaacaacacaagcaattcacaacataacagtattaatgaaaagcatcaacaacttaaacatcataca 22652132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 12339640 - 12339717
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12339640 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 12339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 4589040 - 4588967
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4589040 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 4588967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 5223238 - 5223315
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5223238 aacagcaacaaaaacagcacaaacaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 5223315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 6808079 - 6808153
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  6808079 caacgtagacaacattaacaacttaagacttcaatactttggaaagacaacttacaactttacaacttagaccaa 6808153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 11300697 - 11300620
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  11300697 aacagcaacagaaacaacacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 11300620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 37439903 - 37439826
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  37439903 aacagcaacataaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 37439826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 10542551 - 10542492
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10542551 caacttagacaacatcaacaacttaagactccagtactttggaacgacaacttacaactt 10542492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 5841787 - 5841852
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5841787 cttcaacaacttatacaacatcaacaacttaaggctccaatactttggaacgacaacttacaactt 5841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 19775607 - 19775684
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  19775607 aacagcaacagaaacagcacaaacaattcacaacatagcaatattaatatgaagtatcaacaacttaaacatcataca 19775684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 6805894 - 6805783
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| | ||||||||||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  6805894 caacttggtcaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 6805795  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  6805794 aacaacaacaga 6805783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 15964816 - 15964888
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  15964816 caacagaaacagcacaagcaattcacaacaaaacaatattaatataaagtatcaacaacttaaacatcataca 15964888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 15968740 - 15968812
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  15968740 caacagaaacagcacaagcaattcacaacaaaacaatattaatataaagtatcaacaacttaaacatcataca 15968812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 15972664 - 15972736
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  15972664 caacagaaacagcacaagcaattcacaacaaaacaatattaatataaagtatcaacaacttaaacatcataca 15972736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 324017 - 324076
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  324017 caacttggacaacatcgacaacttaagactccaatactttggaacgacaacttacaactt 324076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 4111494 - 4111443
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4111494 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 4111443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 7109562 - 7109613
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7109562 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 7109613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 7113497 - 7113548
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7113497 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 7113548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 11069932 - 11069983
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11069932 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 11069983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 11165774 - 11165723
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11165774 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 11165723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 22321528 - 22321579
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321528 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 22321579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 22336583 - 22336634
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22336583 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 22336634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 27409889 - 27409838
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27409889 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 27409838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 28949588 - 28949639
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28949588 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 28949639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 55022731 - 55022782
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55022731 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 55022782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 15617239 - 15617289
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15617239 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 15617289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 30065811 - 30065861
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30065811 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 30065861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 11854575 - 11854652
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| ||||| ||||||  |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  11854575 aacagcaacataaacagctcaagcaattcacaacataacaatattaatacggagcatcaacaacttaaacatcataca 11854652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 17685819 - 17685711
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||||          |||||||||||||||||||||||||| ||| | ||||||    
T  17685819 cttcaacaacttagataacattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagatcaacacctgcaa 17685720  T
Q  192 cttgatcaa 200  Q
    |||||||||    
T  17685719 cttgatcaa 17685711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 32403118 - 32403058
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt 168  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  32403118 caacttagacaacatcaacaacttaagaatccaacactttggaacgacatcttacaacttt 32403058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 43889957 - 43889905
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43889957 gacaacatcgacaacttaagactccaatactttggaacgacaacttacaactt 43889905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 4107642 - 4107591
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4107642 gcaattcacaacataacaatattaatgtgaaacatcaacaacttaaacatca 4107591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 14499189 - 14499240
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14499189 gcaattcacaacataacaatattaatgtgaagcatcaaccacttaaacatca 14499240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 36527709 - 36527804
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaac 211  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||        |||||||||||||||| | |||||||||||||||||| ||||| |    
T  36527709 ttagacaacattaacaacttaagattccaatactttggaaagacaac--------ttacaacttagaccaacacctgcaacttgatcaatatgcaacagc 36527800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 10542598 - 10542546
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  10542598 gacaacatcgacaacttaagactccaatactttggaacaacaacttacaactt 10542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 12469690 - 12469742
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  12469690 gacaacatcgacaacttaagactccaataatttggaacgacaacttacaactt 12469742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 15245980 - 15246032
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaactt 160  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  15245980 caacttagacaacatcatcaacttaggactccaatactttggaacgacaactt 15246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 18700648 - 18700596
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  18700648 gacaacatcgacaacttaagattccaatactttggaacgacaacttacaactt 18700596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 22651974 - 22652034
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttac 162  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  22651974 cttcaacaacttagacaacattaacaatttaagactccaatactttggaaagacaacttac 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 3265170 - 3265115
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  3265170 ttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactt 3265115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 9577587 - 9577634
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgac 155  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  9577587 caacttagacaacatcaacaacttaagactccaacactttggaacgac 9577634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 10834251 - 10834207
Alignment:
Q  119 acatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  10834251 acatcaacaacttaagactccaatactttggaacgacatcttaca 10834207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 15206898 - 15206950
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaactt 160  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  15206898 caacttagacaaaatcatcaacttaggactccaatactttggaacgacaactt 15206950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 15265101 - 15265153
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaactt 160  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  15265101 caacttagacaacatcatcaacttaggactccaatactttggaatgacaactt 15265153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 14569163 - 14569070
Alignment:
Q  189 caacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||||||| |||||||||||  ||||| |||||||||||||  |||| |||||  || |||||||  ||| |||||||||||    
T  14569163 caacttgatcaatattcaacagcaacagaaacaacacaagtaattcacaacatatgaataataatgacaaacatcaac-tctttaacatcataca 14569070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 23318869 - 23318824
Alignment:
Q  111 cttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||    
T  23318869 cttagacaacatcatcaacttaggactccaatactttggaacgaca 23318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 42353550 - 42353462
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  ||||||  |||||||||||||| ||||||| |||||| || ||||||||    
T  42353550 caacttagacaacttcaacaactcatatgactccaatatcttggaataacaacttacaacttgacaactttgaccaacatatgcaactt 42353462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 11886621 - 11886546
Alignment:
Q  109 aacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||||||||||||||   ||  ||||||  ||||||| ||||||||||||||| |||||||||||||    
T  11886621 aacttagacaacatcaacaacttataggatgccaatatcttggaacaacaacttacaactttgcaacttagaccaa 11886546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 13026521 - 13026468
Alignment:
Q  199 aatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||| ||||||||| ||||||||| ||||||||||||||  |||||||||||||    
T  13026521 aataatcaacaacagcagaaacagcacaagcaattcacataataacaatattaa 13026468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 13030113 - 13030060
Alignment:
Q  199 aatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||| ||||||||| ||||||||| ||||||||||||||  |||||||||||||    
T  13030113 aataatcaacaacagcagaaacagcacaagcaattcacataataacaatattaa 13030060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 50349046 - 50348958
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    |||||| ||||||||||||||||  || ||||||||||  ||||||| |||||||| ||||| ||||||| ||| || || ||||||||    
T  50349046 caacttggacaacatcaacaacttatatgactccaatatcttggaacaacaacttaaaacttgacaactttgactaacatatgcaactt 50348958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 16643135 - 16643183
Alignment:
Q  235 acaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||| ||  ||||| |||||||||||||||||||||    
T  16643135 acaacataacaatattactgaaaagcaccaacaacttaaacatcataca 16643183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 20417210 - 20417258
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||| ||||||||||||||| |||||||||||||    
T  20417210 gactccaatatcttggaacaacaacttacaactttgcaacttagaccaa 20417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 45220457 - 45220417
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaat 142  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  45220457 cttcaacaacttagacaacattaacaacttaagactccaat 45220417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 49970200 - 49970132
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt-tacaacttagaccaa 182  Q
    |||||||| |||||||||| | |||||||||||||| | ||| ||||||||||  ||||||||||||||    
T  49970200 gacaacattaacaacttaaaattccaatactttggatcaacatcttacaacttaaacaacttagaccaa 49970132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 37037950 - 37038041
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgat--caata----ttcaacaacaacagaaacag 222  Q
    |||||||  ||||||  ||||||||||||||||||||||||||||| |  |||||||| ||  |||||    ||||||||||||||||||||    
T  37037950 tccaatatcttggaataacaacttacaactttacaacttagaccaacacttgcaacttaatgacaataatggttcaacaacaacagaaacag 37038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 42325143 - 42325096
Alignment:
Q  135 actccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||  ||||||  |||||||||||||||||||||||||||||    
T  42325143 actccaatatcttggaataacaacttacaactttacaacttagaccaa 42325096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 16044476 - 16044545
Alignment:
Q  108 caacttagacaacatcaacaacttaag--actccaatactttggaacgacaacttacaactttacaactt 175  Q
    ||||||||||||| ||||||||||| |  | |||||||  ||||||| ||||||||||||||| ||||||    
T  16044476 caacttagacaacttcaacaacttatgtgattccaatatcttggaacaacaacttacaactttgcaactt 16044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 16049952 - 16050021
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaactt 175  Q
    ||||||||||||| |||||||||||   || |||||||  ||||||| ||||||||||||||| ||||||    
T  16049952 caacttagacaacttcaacaacttatatgattccaatatcttggaacaacaacttacaactttgcaactt 16050021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 16059335 - 16059404
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaactt 175  Q
    ||||||||||||| |||||||||||   || |||||||  ||||||| ||||||||||||||| ||||||    
T  16059335 caacttagacaacttcaacaacttatatgattccaatatcttggaacaacaacttacaactttgcaactt 16059404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 6158529 - 6158574
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||  ||||||  |||||||||||||||||||||||||||||    
T  6158529 tccaatatcttggaataacaacttacaactttacaacttagaccaa 6158574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 14642470 - 14642425
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||  ||||||  |||||||||||||||||||||||||||||    
T  14642470 tccaatatcttggaataacaacttacaactttacaacttagaccaa 14642425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 15565582 - 15565634
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaac 158  Q
    |||||| ||||||||||||||||  || ||||||||||||||||||| |||||    
T  15565582 caacttggacaacatcaacaacttatacgactccaatactttggaacaacaac 15565634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 16728392 - 16728480
Alignment:
Q  108 caacttagacaacatcaacaacttaag--actccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| ||||||||| | |  |||||||||  ||||||| |||||||||||||| ||||| | ||| || || ||||||||    
T  16728392 caacttagacaacttcaacaactcatgtgactccaatatcttggaacaacaacttacaacttgacaaccttgactaacatatgcaactt 16728480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 12512741 - 12512693
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||   ||||||||||||||||||||||||||||    
T  12512741 gactccaatatcttggaatatcaacttacaactttacaacttagaccaa 12512693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 7231 - 7050
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7231 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 7132  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  7131 atgcaacagcaacagaaacagtacaaacaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 7050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 54128 - 53947
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  54128 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 54029  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  54028 atgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 53947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 34874502 - 34874321
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  34874502 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 34874403  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  34874402 atgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 34874321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 23707578 - 23707397
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  23707578 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 23707479  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  23707478 atgcaacagcaacagaaatagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 23707397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 24917941 - 24918122
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  24917941 cttcaacaacttagacaaaattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 24918040  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  24918041 atgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 24918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 27472250 - 27472431
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  27472250 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 27472349  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  27472350 atgcaacagcaacagaaacagtacaagcaattcacaacataataatattaatgaagagcatcaacaacttaaacatcataca 27472431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 24670826 - 24671007
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  24670826 cttcaacaacttagacaacattaacaacttaagactccaatacttgtgaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 24670925  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  24670926 atacaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 24671007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 113 - 283
Target Start/End: Complemental strand, 21082015 - 21081845
Alignment:
Q  113 tagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaaca 212  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  21082015 tagacaacattaacaacttaacactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagca 21081916  T
Q  213 acagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||    
T  21081915 acagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaataacttaaacatcataca 21081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 22459852 - 22459671
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22459852 cttcaacaatttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 22459753  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||| |||||    
T  22459752 atgcaacagcaaccgaaacagtacaagcaattcacaacataacaatattaatgaaaagcatcaacaacttcaacattataca 22459671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 24681247 - 24681426
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| | ||||||||||||||||    
T  24681247 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagaaaacttgcaactttacaacttagaccaacacctgcaacttgatcaat 24681346  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |  ||||| |||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||    
T  24681347 a--caacagcaacagaaacagtacaagcaattcacaacataacaatactaatgacgagcatcaacaacttaaacatcataca 24681426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 21914741 - 21914921
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  21914741 cttcaacaacttagacaacattagcaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaa 21914840  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||||||    |||||||||||||||||||||||||    
T  21914841 tattcaacatcaacagaaacagcacaagcaattctcaacataacaatattaaataaaagcatcaacaacttaaacatcata 21914921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 140 - 283
Target Start/End: Complemental strand, 23069535 - 23069392
Alignment:
Q  140 aatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaac 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  23069535 aatactttggaacgacagcttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacagaaacagcacaagcaattcacaac 23069436  T
Q  240 ataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23069435 ataacaatattaatgagaagcatcaacaacttaaacatcataca 23069392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 34492425 - 34492243
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||| |||||||||||||||||    
T  34492425 cttcaacaacttatacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacgacttaaaccaacatctgcaacttgatcaa 34492326  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||||||  | ||||||||| ||||||||||||||||||   ||||||||||||||||||||| |||||    
T  34492325 tattcaacaacaacagaaacatcagaagcaattctcaacataacaatattaataaaaagcatcaacaacttaaacattataca 34492243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 108 - 267
Target Start/End: Complemental strand, 20320884 - 20320723
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    ||||||| |||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||||||| |||||    
T  20320884 caacttaaacaacatcaacaacttatatgacttcaatactttggaacgacaacttataactttacaatttagaccaacacctgcaacttgatcagtattc 20320785  T
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaaca 267  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  20320784 aacaacaacagaaacagtacaagcaattcacaacatgacaatattaatgaaaagcatcaaca 20320723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 24316384 - 24316194
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||          ||||||||||||||||  |||||||||||| | ||||||    
T  24316384 cttcaacaacttagacaacattaacaatttaagactccaatactttggaacactttggaaagacaacttacaactttgtaacttagaccaacacctgcaa 24316285  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  24316284 cttgatcaatatgcaacagcaacagaaatagtacaagcaattcacaacataacaatattaatgaaaagcatc-acaacttaaacatcataca 24316194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 18358964 - 18358842
Alignment:
Q  161 acaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagc 260  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||| ||||||||||  ||||    
T  18358964 acaactttacaacttagaccaacatctgcaacttgatcaatattcaatagcaacagaaacagcacaagaaattcacaacataataatattaatgaaaagc 18358865  T
Q  261 atcaacaacttaaacatcataca 283  Q
    |||||||||||||||||| ||||    
T  18358864 atcaacaacttaaacatcgtaca 18358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 30345258 - 30345181
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30345258 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 30345181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 1283228 - 1283305
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  1283228 aacagcaacagaaacaacacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 1283305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 31345051 - 31345128
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31345051 aacagcaacagaaacagcacaagtaattcacaacataacaatattagtgtgaagcattaacaacttaaacatcataca 31345128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 13101811 - 13101746
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  13101811 cttcaacaacttagacaacatcaaccatttaagactccaatactttggaacgacaacttacaactt 13101746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 41531271 - 41531194
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  41531271 aacagcaacataaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 41531194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 12901757 - 12901706
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12901757 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 12901706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 24628724 - 24628673
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24628724 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 24628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 27601657 - 27601708
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27601657 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 27601708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 24815596 - 24815516
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacaga 217  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| ||||||||||||||||||||||    
T  24815596 tccaatactttggaactacatcttacaactttgtaacttagaccaacacttgcaacttaatcaatattcaacaacaacaga 24815516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 39828152 - 39828104
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39828152 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 39828104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 24649218 - 24649269
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24649218 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaagcatca 24649269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 27379678 - 27379627
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27379678 gcaattcgcaacataacaatattaatgtgaagcatcaacaacttaaacatca 27379627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 27383724 - 27383673
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27383724 gcaattcgcaacataacaatattaatgtgaagcatcaacaacttaaacatca 27383673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 34136902 - 34136957
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34136902 caacttggacaacatcaacaacttaagactccaatactttggaacgacatcttaca 34136957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 10101889 - 10101839
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10101889 caattcacaacataacaatattaatgtgaaacatcaacaacttaaacatca 10101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 20915189 - 20915273
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaa 218  Q
    |||||||||||||| |||| ||| |||||||||||  |||||||||||| |  |||||||| || ||||||||||||||||||||    
T  20915189 gactccaatactttagaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattcaacaacaacagaa 20915273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 24834997 - 24834921
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaa 213  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| ||||||||||||||||||    
T  24834997 tccaatactttggaactacatcttacaactttgtaacttagaccaacacttgcaacttaatcaatattcaacaacaa 24834921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 21073651 - 21073596
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  21073651 caacttggtcaacatcaacaacttaagactccaatactttggaacgacatcttaca 21073596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 37379421 - 37379488
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttta 169  Q
    ||||| ||||||| ||||||| ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  37379421 cttcaacaacttaaacaacattaacaacttaagactctaattctttggaaagacaacttacaacttta 37379488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 5985213 - 5985261
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  5985213 gactccaatatcttggaacaacaacttacaactttacaacttagaccaa 5985261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 9241889 - 9241943
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9241889 caacttggtcaacatcaacaacttaagactccaatactttgg-acgacatcttaca 9241943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 10897732 - 10897647
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  |||||||   |||||||||||| ||||||| ||||||||| ||||||||    
T  10897732 caacttagacaacctcaacaactcatatgactccaatatcttggaac---aacttacaacttgacaactttgaccaatatatgcaactt 10897647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 20320930 - 20320879
Alignment:
Q  116 acaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||| |||||||    
T  20320930 acaacatcgacaacttaaaactccaatactttagaacgacaactcacaactt 20320879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 22252647 - 22252600
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgac 155  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||    
T  22252647 caacttggacaacatcaacaacttaggactccaacactttggaacgac 22252600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 27485422 - 27485376
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttg 148  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  27485422 cttcaacaacttagacaacattaacaacttaagaccccaatactttg 27485376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 43947523 - 43947481
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttgga 150  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  43947523 caacttagacaacatcatcaacttatgactccaatactttgga 43947481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 25045107 - 25045182
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||||||| || |||||||   ||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  25045107 caacttagacaacacca-caacttatatgactccaatatcttggaataacaacttacaactttacaacttagaccaa 25045182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 18547104 - 18547049
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||  |||| ||||||    
T  18547104 caacttagagaacatcatcaacttaggactccaatactttggattgacatcttaca 18547049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 21367930 - 21367978
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||| |||||||| ||| |||||||||||||  ||||||||||    
T  21367930 gactccaataatttggaacaacatcttacaactttacttcttagaccaa 21367978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 92 - 283
Target Start/End: Original strand, 663 - 864
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaata----------ctttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  663 acatcattatcttcaacaactaagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagacca 762  T
Q  182 atatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    | | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  763 acacctgcaacttgatcaatattcaacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 862  T
Q  282 ca 283  Q
    ||    
T  863 ca 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 9e-73; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 92 - 283
Target Start/End: Original strand, 14258261 - 14258462
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaata----------ctttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||||||||||||||||||    
T  14258261 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaatactttggaatgacaacttacaactttacaacttagacca 14258360  T
Q  182 atatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    | | |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  14258361 acacctgcaacttgatcaatattcaacagcaacagaaacattacaagcaattcacaacataacaatattaatgagaagcatcaacaactcaaacatcata 14258460  T
Q  282 ca 283  Q
    ||    
T  14258461 ca 14258462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 14981725 - 14981544
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  14981725 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 14981626  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||    
T  14981625 atgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaagcatcataca 14981544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 15112774 - 15112955
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  15112774 cttcaacaacttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 15112873  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
     | ||||| |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  15112874 gtgcaacagcaacagaaacagtacaagaaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 15112955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 46580965 - 46580784
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  46580965 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 46580866  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||    
T  46580865 atgcaacagcaacaaaaacagtacaagcaattcacagcataacaatattaatgaagagcatcaacaacttaaacatcataca 46580784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 8940086 - 8940261
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||| |||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  8940086 caacgtagacaacattaataacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 8940185  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  8940186 cagcaacataaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 8940261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 32301124 - 32301299
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||    
T  32301124 caacttagacaacatcgacaacttaagactccaatactttggaacgacaacttgcaactttacaacttagaccaccacctgcaacttgatcaatattcaa 32301223  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||  |||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  32301224 cagcaacagaaacaacacaagcaattcacaacataacaatattaatgaaaagtatcaacaatttaaacatcataca 32301299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 15719816 - 15720007
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||| | ||||||    
T  15719816 cttcaacaacttagacaacatcaacaacttaggactccaatactttggaacactttggaaagacaacttacaactttacaacttagaccaacacctgcaa 15719915  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  15719916 cttgatcaatattcatcagcaacagaaacagtacaagcaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 15720007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 16323888 - 16324060
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| | | |||||||||||||||| |||    
T  16323888 caacttagacaacattaacaacttaagattccaatactttggaaagacaactaacaactttacaacttagaccaacacccgcaacttgatcaatatgcaa 16323987  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    || ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  16323988 cagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcat 16324060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 16579585 - 16579770
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaata----------ctttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  16579585 caacttagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgat 16579684  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16579685 caatattcaacagcaatagaaacagcacaagcaattcacaacataacaatattaatgagaagcatcaacaacttaaacataataca 16579770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 16586078 - 16585893
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa----------cgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||| | ||||||||||||    
T  16586078 caacttagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgat 16585979  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16585978 caatattcaacagcaatagaaacagcacaagcaattcacaacataacaatattaatgagaagcatcaacaacttaaacataataca 16585893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 102 - 282
Target Start/End: Complemental strand, 16550937 - 16550756
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| ||||| ||||||||||||||||     
T  16550937 cttcaacaacttagacaacatcaacaccttaagactccaatactttggaatgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcat 16550838  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcatac 282  Q
    ||||||||| ||| |||||||  |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  16550837 tattcaacatcaatagaaacaacacaagcaattcaaaacataacaatattaatgaaaagcatcaacaacttaaacatcatac 16550756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 32161133 - 32160952
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| | ||| ||||| ||||||    
T  32161133 cttcaacaacttagataacattaacaacttaagactccaatactttagaaagacaacttacaattttacaacttagaccaacacctgtaacttaatcaat 32161034  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| |||||||||||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  32161033 atgcaacagcaacagaaacagcacaagcaattcacaacataacaatattaatgaaaaacatcaacaacttaaacatcataca 32160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 16461059 - 16460874
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa----------cgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| || | ||||||||||||    
T  16461059 caacttagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagacaaacacctgcaacttgat 16460960  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||  | ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  16460959 caatattcaacagcaacagaaacaacaaaagcaattcacaacataacaatattgatgagaagcatcaacaacttaaacatcataca 16460874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 16998413 - 16998602
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacg----------acaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||||           ||||||||||||||||||||||||||||| | ||||||    
T  16998413 cttcaacaacttagacaacattaacaacttaaggctccaatactttggaacactttggaaatacaacttacaactttacaacttagaccaacacctgcaa 16998512  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16998513 cttgatcaatatgcaacagcaacagaaacattacaagcaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcata 16998602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 1490348 - 1490194
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| | ||||||||||||    
T  1490348 caacttagacaacatcaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgat 1490249  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  1490248 caatattcaacaacaacagaaaaagtacaagcaattcacatcataacaatattaa 1490194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 8468589 - 8468727
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  8468589 actttggaaagacaacttacaactttacaacttagaccaacacctgcatcttgatcaatatgcaacagcaacagaaacaatacaagcaattcacaacata 8468688  T
Q  243 acaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  8468689 acaatattaatgaaaagcatcaacaacttaaacatcata 8468727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 15411150 - 15411020
Alignment:
Q  153 gacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15411150 gacaacttacaactttacaacttagaccaacacctgcaacttgatcaatatacaacagcaacagaaacagtacaagcaattcacaacataacaatattaa 15411051  T
Q  253 tgtgaagcatcaacaacttaaacatcataca 283  Q
    ||   |||||||||||||||| |||||||||    
T  15411050 tgaagagcatcaacaacttaagcatcataca 15411020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 15116314 - 15116492
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| |||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||||   ||||||| |  |||||||||||||||    
T  15116314 cttcaacaacttagacaatattaacaacttaagattccaatactttggaaagacaacttacaactttacaa---agaccaacacttgcaacttgatcaat 15116410  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
     | ||||| ||||||||||| |||||| ||||||||| |||||||||||||||  || |||||||||| |||||||||||||    
T  15116411 gtgcaacagcaacagaaacaatacaagaaattcacaaaataacaatattaatgaaaaacatcaacaacgtaaacatcataca 15116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 102 - 282
Target Start/End: Original strand, 16614725 - 16614906
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt-tacaacttagaccaatatct--gcaacttgatc 198  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| ||||| ||||  ||||||||||     
T  16614725 cttcaacaacttagacaacatcaacaccttaagactccaatactttggaatgacaacttacaacttagacaacttaaaccaacatcttcgcaacttgat- 16614823  T
Q  199 aatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcatac 282  Q
      |||| |||| ||| |||||||  |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  16614824 -ttatttaacatcaatagaaacaacacaagcaattcaaaacataacaatattaatgaaaagcatcaacaacttaaacatcatac 16614906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 17232790 - 17232928
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||| ||||||||||||||||||||||| | |||||     
T  17232790 actttggaaagacaacttacaactttacaacttagaccaacacctgcatcttgatcaatatgcaacagcaacagaaacagtacaagcaatttataacatg 17232889  T
Q  243 acaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    ||||||||||||  || ||||||||||||||||||||||    
T  17232890 acaatattaatgaaaaacatcaacaacttaaacatcata 17232928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 14273335 - 14273526
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| || | ||||||    
T  14273335 cttcaacaacttaaacaacattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagacaaacacctgcaa 14273434  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||| | ||||||||| |||||||   |||| |||||||||||||||||||  || || |||||||||||||||||||||    
T  14273435 cttgatcaatatgcaatagcaacagaaatagtacaaaatattcgcaacataacaatattaatgaaaaacaccaacaacttaaacatcataca 14273526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 13918711 - 13918634
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13918711 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 13918634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 25927434 - 25927357
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25927434 aacatcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 25927357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 2530316 - 2530244
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2530316 caacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 2530244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 1859017 - 1858940
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1859017 aacagcaacagaaacagcacaagcaattcacaacatatcaatattaatgtgaagcatcaacaacttaaacatcataca 1858940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 15084035 - 15084112
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15084035 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 15084112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 45170268 - 45170196
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  45170268 caacagaaacagtacaaacaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 45170196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 11392166 - 11392107
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11392166 caacttagacaacatcaacaacttaaggctccaatactttggaacgacaacttacaactt 11392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 17060622 - 17060533
Alignment:
Q  193 ttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||| | | ||| |||||||  |||||||||||||||||||||||||||    
T  17060622 ttgatcaatattcaacagcaatagaaacagtacaagcaattcacaa-agaccaacattaatgaaaagcatcaacaacttaaacatcataca 17060533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 11084942 - 11085015
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | ||||||||    
T  11084942 aacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaacttgacaccatagaccaa 11085015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 39722105 - 39722182
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  39722105 aacagcaacataaacagcacaagcaattcacaacataacaatattattatgaagtatcaacaacttaaacatcataca 39722182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 709488 - 709377
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| | ||||||||||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  709488 caacttggtcaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 709389  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  709388 aacaacaacaga 709377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 32301077 - 32301129
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32301077 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 32301129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 32968 - 33019
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32968 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 33019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 11092677 - 11092753
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||    ||||||||| |||||||||||||||||    
T  11092677 cttcaacaacttagacaacattaacaacttaagactccaatactttggaa----aacttacaaatttacaacttagaccaa 11092753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 12704904 - 12704853
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12704904 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 12704853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 12714725 - 12714776
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12714725 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 12714776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 12718529 - 12718580
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12718529 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 12718580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 16114102 - 16114153
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16114102 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 16114153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 16117255 - 16117306
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16117255 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 16117306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 16461109 - 16461054
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16461109 ttagacaacatcgacaacttaagactccaatactttggaacgacaacttacaactt 16461054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 16907446 - 16907395
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16907446 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 16907395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 18283227 - 18283278
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18283227 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 18283278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 26292256 - 26292307
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26292256 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 26292307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 9320639 - 9320565
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| ||||||| || |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  9320639 caacgtagacaatattaacaacttaagactccaatattttggaaagacaacttacaactttataacttagaccaa 9320565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 16462155 - 16462266
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| | ||| ||||||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  16462155 caacttggtcaatatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 16462254  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  16462255 aacaacaacaga 16462266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 12723440 - 12723491
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12723440 gcaattcacaacataacaatattaatgtgaagcatcaacagcttaaacatca 12723491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 18279264 - 18279315
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18279264 gcaattcaaaacataacaatattaatgtgaagcatcaacaacttaaacatca 18279315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 71009 - 70959
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  71009 caattcacaacataacaatattaatgtgaagcatcgacaacttaaacatca 70959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 75118 - 75068
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  75118 caattcacaacataacaatattaatgtgaagcatcgacaacttaaacatca 75068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 38519335 - 38519389
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38519335 aacttggacaacatcaacaacttaagactccaatactttggaacgacatcttaca 38519389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 41055594 - 41055705
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| | ||||||||||||||||   || || ||||||||||| | ||| |||||||||||| |||||||||||| |  |||||||| || |||||||    
T  41055594 caacttggtcaacatcaacaacttatatgattctaatactttggagcaacatcttacaactttataacttagaccaacacttgcaacttaattaatattc 41055693  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  41055694 aacaacaacaga 41055705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 9033506 - 9033457
Alignment:
Q  108 caacttagacaacatcaa-caacttaagactccaatactttggaacgaca 156  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9033506 caacttagacaacatcaaacaacttaagactccaatactttggaacgaca 9033457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 43277768 - 43277680
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    |||||| ||||||||||||||||||   |||||||||| |||||||| |||||||||||||| ||||||| ||| || || ||||||||    
T  43277768 caacttggacaacatcaacaacttatatgactccaatattttggaacaacaacttacaacttgacaactttgactaacatatgcaactt 43277680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 16579538 - 16579590
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  16579538 gacaacatcgacaacttaagactccgaaactttggaacgacaacttacaactt 16579590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 16586125 - 16586073
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  16586125 gacaacatcgacaacttaagactccgaaactttggaacgacaacttacaactt 16586073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 130976 - 130921
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  130976 caacttggacaacatcaacaacttaggactccaacactttggaacgacatcttaca 130921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 11661234 - 11661289
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  11661234 caacttggtcaacatcaacaacttaagactccaatactttggaacaacatcttaca 11661289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 14157259 - 14157204
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||| |||||||||||| |||||||||||| || |||||||||||||||    
T  14157259 ttagacaacattaacaacttaagattccaatactttgcaaagacaacttacaactt 14157204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 14421912 - 14421967
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  14421912 caacttggtcaacatcaacaacttaaggctccaatactttggaacgacatcttaca 14421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 42461911 - 42461966
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  42461911 caacttggataacatcaacaacttaagactccaatacattggaacgacatcttaca 42461966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 48811985 - 48812068
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacaga 217  Q
    |||||||||| |||||| | ||| |||||||||||  |||||||||||| |  |||||||| || |||||||||||||||||||    
T  48811985 gactccaataatttggatcaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattcaacaacaacaga 48812068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 10501577 - 10501483
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaac 211  Q
    ||||||||||| |||||||||||| || |||||||||||| ||||||||||        |||| ||||||| | |||||||||||||||||| |||||||    
T  10501577 ttagacaacattaacaacttaagattc-aatactttggaaagacaacttac--------aactcagaccaacacctgcaacttgatcaatatgcaacaac 10501487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 15281367 - 15281439
Alignment:
Q  110 acttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagacc 180  Q
    ||||||||||| |||||||||||   ||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  15281367 acttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttgcaacttagacc 15281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 33001067 - 33001139
Alignment:
Q  112 ttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||| |||||||||||   ||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  33001067 ttagacaacttcaacaacttatatgactccaatatcttgaaacaacaacttacaactttacaacttagaccaa 33001139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 16996184 - 16996232
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  16996184 caacttggacaacatcaacaacttaggactccaacactttggaacgaca 16996232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 17232744 - 17232787
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa 151  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  17232744 caacttagacaacattaacaacttaatactccaatactttggaa 17232787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 4070829 - 4070905
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||   || |||||||  ||||||| ||||||||||||||| |||||| ||||||    
T  4070829 caacttagacaacttcaacaacttatacgattccaatatcttggaacaacaacttacaactttgcaactttgaccaa 4070905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 11053734 - 11053810
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||| ||||||   ||||| ||||  ||||||| ||||||||||||||| |||||||||||||    
T  11053734 caacttagacaacttcaaaaacttatatgactcaaatatcttggaacaacaacttacaactttgcaacttagaccaa 11053810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 36705591 - 36705531
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||  ||||||  |||||| ||||||||||||||||||||||||  ||||||||    
T  36705591 gactccaatatcttggaataacaactcacaactttacaacttagaccaatacttgcaactt 36705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 11525723 - 11525668
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||| |||||||  |||||||||| ||| ||||||    
T  11525723 caacttggacaacatcaacaacttaggactccagcactttggaacaacatcttaca 11525668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 17071190 - 17071117
Alignment:
Q  154 acaacttacaactttacaacttagaccaatatctgcaacttgat--caata----ttcaacaacaacagaaaca 221  Q
    ||||||||||||||||||||||||||||| |  |||||||| ||  |||||    |||||||||||||||||||    
T  17071190 acaacttacaactttacaacttagaccaacacttgcaacttaatggcaataatggttcaacaacaacagaaaca 17071117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 17130691 - 17130616
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||  || ||||| ||||  |||||||  ||||||||||| ||||||||||||||||    
T  17130691 caacttagacaacttcaacaacttatatgactctaatatcttggaacatcaacttacaac-ttacaacttagaccaa 17130616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 18607430 - 18607470
Alignment:
Q  122 tcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  18607430 tcaacaacttaagactccaatactttgg-acgacatcttaca 18607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 16185916 - 16185959
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaac 152  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||||    
T  16185916 caacttagacagcat-aacaacttaggactccaatactttggaac 16185959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 16185960 - 16185996
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagac 179  Q
    ||||||||| || ||||||||||||||||||||||||    
T  16185960 actttggaaagataacttacaactttacaacttagac 16185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 22238308 - 22238127
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22238308 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 22238209  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||    
T  22238208 atgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaagaggatcaacaacttaaacatcataca 22238127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 23478199 - 23478381
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||| |||| ||||||||||||    
T  23478199 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttataacttagacaacttaaaccaacatctccaacttgatcaa 23478298  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  23478299 tattcaacatcaaaagaaacagcacaagcaattcacaacataacaatattaatgaaaagcataaacaacttaaacatcataca 23478381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 108 - 278
Target Start/End: Original strand, 37515542 - 37515712
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||    
T  37515542 caacttagacaacatcgacaacttaagactccaatactttggaacgacaacttgcaactctacaacttagaccaacacctgcaacttgatcaatattcaa 37515641  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatc 278  Q
    || |||||||||||  ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  37515642 cagcaacagaaacatcacaagcaattcacaacatatcaatattaatgaaaagcatcaacaacttaaacatc 37515712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 18833399 - 18833574
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   || |||||||||||||||||||    
T  18833399 caacttggacaacatcgacaacttaagactccaatacttcggaacgacaacttacaactttacaacttagaccaactcctacaacttgatcaatattcaa 18833498  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||| || |||||||||||||||||    
T  18833499 caacaacataaacagcacaagcaattcacaacatatcaatattaatgagaagcataaaaaacttaaacatcataca 18833574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 44384969 - 44384821
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  44384969 acatcatcatcttcaacaacttagacaacatcaacagcttaagactccaatactttggaacgacgacttacaactttacaacttagaccaacacctgcaa 44384870  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaaca 240  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  44384869 cttgatcaatattcaacagcaacagaaacagcacaagcaattcacaaca 44384821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 102 - 280
Target Start/End: Original strand, 23409626 - 23409804
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  23409626 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaatttgatcaat 23409725  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    || ||||| |||||||||||  |||||||||||||||||||||||||||||||   | ||||||||||||||| |||||    
T  23409726 atgcaacagcaacagaaacaacacaagcaattcacaacataacaatattaatgaagaacatcaacaacttaaatatcat 23409804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 5760518 - 5760693
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  5760518 caacttggacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaacttagaccaacacttgcaacttgatcaatattcaa 5760617  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||  |||||||||||||| |||||||||||||| |  || || | ||||||| |||||||||||    
T  5760618 caacaacagaaacaacacaagcaattcacatcataacaatattaacgataaacaactacaacttcaacatcataca 5760693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 22352887 - 22353019
Alignment:
Q  122 tcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaaca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  22352887 tcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacagaaaca 22352986  T
Q  222 gtacaagcaattcacaacataacaatattaatg 254  Q
      |||||||||||||||||||||||||||||||    
T  22352987 acacaagcaattcacaacataacaatattaatg 22353019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 17461346 - 17461161
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| || | ||||||||||||    
T  17461346 caacttagacatcattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagacaaacacctgcaacttgat 17461247  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||||    
T  17461246 caatatgcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgaaaagcaccaacaacttaaacatcttaca 17461161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 19879947 - 19880129
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||| ||||| |||||||||||| ||||    
T  19879947 cttcaacaactttggcaacatcaacaacttaagactccaatactttggaacgacaacttacaactcagaccacttaaaccaacatctgcaacttggtcaa 19880046  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||  ||||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||    
T  19880047 tattcaacatcaacagaaacaacacaagcaattctcaacataaaaatattaatgaaaagcatcaacaacttaaacatcataca 19880129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 123 - 283
Target Start/End: Original strand, 26453850 - 26454011
Alignment:
Q  123 caacaacttaagactccaatactttggaacgacaacttacaactttac-aacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaaca 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  | |||||| ||||| |||||||||||||||||||||||||  |||||||||||    
T  26453850 caacaacgtaagactccaatactttggaacgacaacttacaacttagccaacttaaaccaacatctgcaacttgatcaatattcaactgcaacagaaaca 26453949  T
Q  222 gtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
      |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  26453950 acacaagcaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 26454011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 19808601 - 19808471
Alignment:
Q  153 gacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||| ||||||||    
T  19808601 gacaacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacagaaccattacaagcaattcacaacataaaaatattaa 19808502  T
Q  253 tgtgaagcatcaacaacttaaacatcataca 283  Q
    ||   ||||||||||||||||||||||||||    
T  19808501 tgaagagcatcaacaacttaaacatcataca 19808471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 14398040 - 14397963
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14398040 aacagcaacagaaacagcacaaacaattcacaacataacaatattaatgtgaagcaacaacaacttaaacatcataca 14397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 21410789 - 21410866
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  21410789 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 21410866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 21805281 - 21805358
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  21805281 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 21805358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 18302920 - 18302809
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  ||||||||||| |||||||    
T  18302920 caacttggacaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttgattaatattc 18302821  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  18302820 aacaacaacaga 18302809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 21828281 - 21828204
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  21828281 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 21828204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 18862907 - 18862835
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  18862907 caacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 18862835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 19929717 - 19929603
Alignment:
Q  167 ttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaa-cagtacaagcaattcacaacataacaatattaatgtgaagcatcaa 265  Q
    ||||||||| |||||| |  |||||||| || ||||||||||| ||||| ||| ||| |||||||||||||| ||||||||||||||||  |||||||||    
T  19929717 ttacaacttggaccaacacttgcaacttaattaatattcaacagcaacataaaacagcacaagcaattcacagcataacaatattaatgataagcatcaa 19929618  T
Q  266 caacttaaacatcat 280  Q
    |||||| ||||||||    
T  19929617 caacttcaacatcat 19929603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 21976915 - 21976864
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21976915 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 21976864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 22111792 - 22111843
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111792 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 22111843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 43251674 - 43251725
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43251674 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 43251725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 19278528 - 19278477
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19278528 gcaattcagaacataacaatattaatgtgaagcatcaacaacttaaacatca 19278477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 32807206 - 32807281
Alignment:
Q  108 caacttagacaacatcaacaacttaag-actccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| |||||||||| ||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32807206 caacgtagacaacattaacaacttaatcactccaatactttggaaagacaacttataactttacaacttagaccaa 32807281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 22253323 - 22253268
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  22253323 caacttggacaacatcaacatcttaagactccaatactttggaacgacatcttaca 22253268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 37515489 - 37515532
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37515489 caacttagacaacatcaacaacttaagactccaatactttggaa 37515532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 20084577 - 20084489
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  ||||||| |||||||||||||| ||||||| |||||| || ||||||||    
T  20084577 caacttagacaacttcaacaactcatatgactccaatatcttggaacaacaacttacaacttgacaactttgaccaacatatgcaactt 20084489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 13665415 - 13665304
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| || |||||||||||||||   ||||||||| ||||||||| ||| |||| ||||||  |||||||||||  || |||||||| || |||||||    
T  13665415 caacttggataacatcaacaacttatatgactccaatgctttggaacaacatcttaaaactttgtaacttagaccaccatttgcaacttaattaatattc 13665316  T
Q  206 aacaacaacaga 217  Q
    || |||||||||    
T  13665315 aataacaacaga 13665304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 13724690 - 13724579
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| || |||||||||||||||   ||||||||| ||||||||| ||| |||| ||||||  |||||||||||  || |||||||| || |||||||    
T  13724690 caacttggataacatcaacaacttatatgactccaatgctttggaacaacatcttaaaactttgtaacttagaccaccatttgcaacttaattaatattc 13724591  T
Q  206 aacaacaacaga 217  Q
    || |||||||||    
T  13724590 aataacaacaga 13724579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 16799448 - 16799492
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaac 152  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  16799448 caacttagacaacatcaacaacttaagactcaaatactttggaac 16799492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 28397512 - 28397560
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  28397512 caacttagacaacatcatcaacttaggactccaatactttggaacgaca 28397560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 5083312 - 5083257
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  5083312 caacttggacaacatcaacaacttaggactccaacactttggaacgacatcttaca 5083257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 22381890 - 22381835
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  22381890 caacttggacaacatcaagaacttaagactccaatactttgggacgacatcttaca 22381835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 22244506 - 22244582
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||   |||||||| |  ||||||| ||||||||||||||| |||||||||||||    
T  22244506 caacttagacaacttcaacaacttatatgactccaagatcttggaacaacaacttacaactttgcaacttagaccaa 22244582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 22259312 - 22259224
Alignment:
Q  108 caacttagacaacatcaacaacttaag--actccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| ||||||||| | |  |||||||||  ||||||| |||||||||||||| ||||||| |||||| || ||||||||    
T  22259312 caacttagacaacttcaacaactcatgtgactccaatatcttggaacaacaacttacaacttgacaactttgaccaacatatgcaactt 22259224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 23669527 - 23669633
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| |||||| ||| |||||||   ||||||||||||||||||||| | ||||||||||   |||||||||||| |  |||||| | || |||||||    
T  23669527 caacttggacaacttcaccaacttatatgactccaatactttggaacgaaatcttacaacttcgtaacttagaccaacacttgcaacataattaatattc 23669626  T
Q  206 aacaaca 212  Q
    |||||||    
T  23669627 aacaaca 23669633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 17217690 - 17217778
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||||   ||||||||||  ||||||| |||||||  |||||| ||||||||||| |||  ||||||||    
T  17217690 caacttagacaacttcaacaacttatatgactccaatatcttggaacaacaactttgaactttgcaacttagaccgatacttgcaactt 17217778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 17907918 - 17907830
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||  ||||||   ||||||||||  ||||||| ||||||||||||||| |||||||||| || || ||||||||    
T  17907918 caacttagacaacttcagaaacttatatgactccaatatcttggaacaacaacttacaactttgcaacttagactaacatttgcaactt 17907830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 23947303 - 23947379
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| ||| |||||||   ||||||||||  ||||||| ||||||||| ||||| |||||||||||||    
T  23947303 caacttagacaacttcatcaacttatatgactccaatatcttggaacaacaacttacgactttgcaacttagaccaa 23947379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 19699168 - 19699244
Alignment:
Q  108 caacttagacaacatcaacaactta-agac-tccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| ||||| ||||| | || |||||||  ||||||  |||||||||||||||||||||||||||||    
T  19699168 caacttagacaacttcaacgacttatatacctccaatatcttggaataacaacttacaactttacaacttagaccaa 19699244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 23659371 - 23659419
Alignment:
Q  235 acaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||||||  || || |||||||||||||||||||||    
T  23659371 acaacataacaatattaatgaaaaacaccaacaacttaaacatcataca 23659419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 17438368 - 17438329
Alignment:
Q  116 acaacatcaacaacttaagactccaatactttggaacgac 155  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  17438368 acaacatcaacaacttaggactccaacactttggaacgac 17438329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 39695451 - 39695388
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||||| |  |||||||||||    
T  39695451 gactccaatatcttggaataacaacttacaacttcacaacttagaccaacacttgcaacttgat 39695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 21972826 - 21972792
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcat 262  Q
    ||||||||||||||||||||||| |||||||||||    
T  21972826 gcaattcacaacataacaatatttatgtgaagcat 21972792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 23888859 - 23888904
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||  ||||||| ||||||||||||||| |||||||||||||    
T  23888859 tccaatatcttggaacaacaacttacaactttgcaacttagaccaa 23888904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 117
Target Start/End: Original strand, 6759255 - 6759283
Alignment:
Q  89 tggacatcatcatcttcatcaacttagac 117  Q
    |||||||||||||||||||||||||||||    
T  6759255 tggacatcatcatcttcatcaacttagac 6759283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 7042 - 6861
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7042 cttcaacaacttagacaacattaacaaattaagactccaatacattggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 6943  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||    
T  6942 atgcaacaacaacagaaacagtacaagcaattcacatcataacaatattaatgaagagcatcaacaacttaaacatcataca 6861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 67092 - 67273
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| | |||||||| |||||||    
T  67092 cttcaacaacttagacaaaattaacaacttaagactccaatactttggaaagacaacttacaactttataacttagaccaacacctgcaactggatcaat 67191  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  67192 atgcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 67273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 8e-70; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 17378087 - 17377906
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  17378087 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 17377988  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||   | ||| ||||||||||||||||||||    
T  17377987 atacaacaacaacagaaacaatacaagcaattcacaacataacaatattaatgaagaacataaacaacttaaacatcataca 17377906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 18913775 - 18913957
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||    
T  18913775 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttaatcaa 18913874  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||    
T  18913875 tattcaacagcaacagaaacagcacaagcaattctcaacataacaatattaatgaaaaacatcaacaacttaaacatcataca 18913957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 18937033 - 18937215
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||    
T  18937033 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttaatcaa 18937132  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||    
T  18937133 tattcaacagcaacagaaacagcacaagcaattctcaacataacaatattaatgaaaaacatcaacaacttaaacatcataca 18937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 115 - 283
Target Start/End: Complemental strand, 15705720 - 15705552
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaac 214  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||    
T  15705720 gacaacatcgacaatttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattaaacagcaac 15705621  T
Q  215 agaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  15705620 agaaacagcacaagcaattcacaacataacaatattaatgagaagcatcatcaacttatacatcataca 15705552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 109 - 283
Target Start/End: Complemental strand, 28104182 - 28104007
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaa-cttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| | ||| |||||||||||||| |||    
T  28104182 aacttagacaacattaacaacttaagactcaaatactttggaaagacaacttacaactttacaaacttagaccaacacctgaaacttgatcaatatgcaa 28104083  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  28104082 caacaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 28104007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 15174388 - 15174206
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  15174388 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaa 15174289  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| ||||| ||| || ||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  15174288 tattcaacagcaacataaatagcacaagtaattctcaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 15174206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 109 - 283
Target Start/End: Original strand, 17743215 - 17743389
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaac 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| | |||||||||||||||| ||||||    
T  17743215 aacttagacaacatcaacaacttaagactccaatactttggaacgacaacctgcaactttgcaacttagaccaacacctgcaacttgatcaatcttcaac 17743314  T
Q  209 aacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    | ||| |||||||  ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  17743315 agcaatagaaacaacacaagcaattcacaacataacaatattaatgagaagtatcaacaacttaaacatcataca 17743389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 22805759 - 22805944
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatac----------tttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    |||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  22805759 caacttagacaacatcaacaacttaagactccaatactttgggatactttggaatgacaacttacaactttacaacttagaccaacacctgcaacttgat 22805858  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22805859 caatattcaacagcaacagaaacaacacgagcaattcacaacataacaatattaatgagaagcatcaacaacttaaacatcataca 22805944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 92 - 283
Target Start/End: Complemental strand, 19773843 - 19773651
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgac-----aacttacaactttacaacttagaccaatatc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||     |||  | ||||| ||||||||||| || | |    
T  19773843 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaatactttggaat-actttggaacg-ataactt-acaacttagac-aacacc 19773748  T
Q  187 tgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    | ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19773747 tacaacttgatcaatattcaacagcaacagaaacaacacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 19773651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 15817785 - 15817630
Alignment:
Q  126 caacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtac 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| | | |||||||  |     
T  15817785 caacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagc-atagaaaca-caa 15817688  T
Q  226 aagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  15817687 aagcaattcacaacataacaatattaatgaaaagcatcaactacttaaacatcataca 15817630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 19656296 - 19656121
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |  |||||||||||||||||||||    
T  19656296 caacttggacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaactttgaccaacacttgcaacttgatcaatattcaa 19656197  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||  ||| |||||||||| |||||||||||||| |  || || | ||||||| |||||||||||    
T  19656196 cagcaacagaaacaacacatgcaattcacatcataacaatattaacgataaacaaccacaacttcaacatcataca 19656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 15875214 - 15875395
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||| ||||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||| |  |||||||||||||||    
T  15875214 cttcaacaacttagataacattaacaacttaaaactccgatactttggaaagacaacttacaattttacaacatagaccaacacttgcaacttgatcaat 15875313  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||  |||| |||||||||||  |||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||    
T  15875314 atgtaacagcaacagaaacaacacaagcaattcacaacataacaatattaatgaaaattatcaacaacttaaacatcataca 15875395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 23414819 - 23414896
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23414819 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 23414896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 27416125 - 27416048
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27416125 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 27416048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 27556577 - 27556654
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27556577 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 27556654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 18917533 - 18917460
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18917533 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 18917460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 18927737 - 18927809
Alignment:
Q  110 acttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18927737 acttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaa 18927809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 31478077 - 31478000
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  31478077 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 31478000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 2201069 - 2201135
Alignment:
Q  116 acaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2201069 acaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaa 2201135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 22420909 - 22420983
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22420909 caacgtagacatcattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaa 22420983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 22948952 - 22949024
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  22948952 caacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 22949024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 23083231 - 23083124
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||||||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  23083231 caacttggacaacatcaacaacttatatgactccaatactttggaacgacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 23083132  T
Q  206 aacaacaa 213  Q
    ||||||||    
T  23083131 aacaacaa 23083124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 16760134 - 16760209
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  16760134 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcata 16760209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 1644547 - 1644620
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  1644547 aacagcaacagaaacagcacaagcaattcacaacataacaatattattatgaagtatcaacaacttaaacatca 1644620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 20182697 - 20182765
Alignment:
Q  115 gacaacatcaacaactta--agactccaatactttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20182697 gacaacatcaacaacttataagactccaatactttggaacgacaactaacaactttacaacttagacca 20182765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 22153294 - 22153226
Alignment:
Q  115 gacaacatcaacaactta--agactccaatactttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22153294 gacaacatcaacaacttataagactccaatactttggaacgacaactaacaactttacaacttagacca 22153226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 28708480 - 28708545
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28708480 cttcaacaacttatacaacatcaacaacttaaggctccaatactttggaacgacaacttacaactt 28708545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 22952908 - 22952980
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||    
T  22952908 caacagaaacagcacaagcaattctcaacataacaatattaatataaagtatcaacaacttaaacatcataca 22952980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 23871396 - 23871468
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||    
T  23871396 caacagaaacagcacaagcaattctcaacataacaatattaatataaagtatcaacaacttaaacatcataca 23871468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 23875352 - 23875424
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||    
T  23875352 caacagaaacagcacaagcaattctcaacataacaatattaatataaagtatcaacaacttaaacatcataca 23875424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 8243722 - 8243773
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8243722 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 8243773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 11566723 - 11566774
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11566723 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 11566774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 18260163 - 18260058
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||| ||||||||||||||| |||||||| |||||| ||  ||||| || |||||||    
T  18260163 caacttggacaacatcaacaacttatatgactccaatactttggaacaacaacttacaactttgcaacttaggccaata-cttgaacttaattaatattc 18260065  T
Q  206 aacaaca 212  Q
    |||||||    
T  18260064 aacaaca 18260058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 19870451 - 19870502
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19870451 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 19870502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 23394929 - 23394980
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23394929 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 23394980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 23989781 - 23989832
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23989781 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 23989832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 19829900 - 19829824
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  19829900 caacttggacaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttacaacttagaccaa 19829824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 20411723 - 20411619
Alignment:
Q  115 gacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaaca 212  Q
    ||||||||||||||||||   |||| |||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || ||||||||||||||    
T  20411723 gacaacatcaacaacttatatgacttcaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattcaacaaca 20411624  T
Q  213 acaga 217  Q
    |||||    
T  20411623 acaga 20411619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 18956025 - 18955953
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||  || |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  18956025 caacagaaacagcgcatgcaattcacaacataacaatattattatgaagtatcaacaacttaaacatcataca 18955953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 12619087 - 12619036
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12619087 gcaattcacagcataacaatattaatgtgaagcatcaacaacttaaacatca 12619036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 17743160 - 17743219
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  17743160 caacttggacaacatcgacaacttaagactccaatactttggaacgacaacttaaaactt 17743219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 20078329 - 20078274
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20078329 caacttagacaacatcaacaacttaagactccagtactttggaacgacatcttaca 20078274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 22862811 - 22862858
Alignment:
Q  232 ttcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22862811 ttcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 22862858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 27573152 - 27573093
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  27573152 caacttagacaacgtcaataacttaagactccaatactttggaacgacaactcacaactt 27573093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 27573206 - 27573147
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  27573206 caacttagacaacatcaacaacttaagactcaaatactttggaacgacagctcacaactt 27573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 23538745 - 23538798
Alignment:
Q  189 caacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  23538745 caacttgatcaatattcaacagcaacagaaacagcacaagcaattcacaacata 23538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 18453144 - 18453199
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  18453144 caacttggacaacatcaacaacttaagactccaatactttgaaacgacatcttaca 18453199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 27573098 - 27573027
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagac 179  Q
    ||||||||||||| |||| || ||||||||||||||||||||| | ||| |||||||||| |||||||||||    
T  27573098 caacttagacaacgtcaataatttaagactccaatactttggatcaacatcttacaacttcacaacttagac 27573027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 22376846 - 22376702
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| |||||||||||||| |||   |||||||| |||||||||| ||| || ||||||||  |  ||||||||| |  |||||||| ||||||||||    
T  22376846 caacttggacaacatcaacaagttatatgactccaaaactttggaacaacatctcacaactttgtacattagaccaacacttgcaacttaatcaatattc 22376747  T
Q  206 aacaacaacagaaacagtac--aagcaattcacaacataacaata 248  Q
    ||||||| ||||  ||| ||  |||||| ||||||||||||||||    
T  22376746 aacaacagcagaggcagcacgtaagcaactcacaacataacaata 22376702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 14472115 - 14472187
Alignment:
Q  211 caacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||| |||||||||||||||||||||||| | ||||| ||||| ||||| ||||| |||||    
T  14472115 caacagaaacagcacatgcaattcacaacataacaatattattatgaagtatcaataacttcaacattataca 14472187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 27573253 - 27573201
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  27573253 gacaacatcgacatcttaagactccaatactttggaacgaaaacttacaactt 27573201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 17105717 - 17105776
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||  |||| || |||||||||||||||||||||||| |||||||||||||||    
T  17105717 caacttagacggcatcgacgacttaagactccaatactttggaaagacaacttacaactt 17105776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 23538691 - 23538750
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||||||||||||| || |||||||||||||||||||| |||| |||| |||||||||    
T  23538691 caacttagacaacatcgacgacttaagactccaatactttagaacaacaaattacaactt 23538750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 17105771 - 17105864
Alignment:
Q  189 caacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||| ||||||| |||||||||||  ||| ||||||| ||||||| ||||| |||||  || ||||||| |||| |||||||||||    
T  17105771 caacttgatcaatgttcaacagcaacagaaacaacacaggcaattctcaacatatcaataataatgacaaacatcaac-actttaacatcataca 17105864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 18896472 - 18896424
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  18896472 caacttagacaacatcatcaacttaggactccaatattttggaacgaca 18896424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 23838137 - 23838191
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  23838137 caacttggtcaacatcaacaacttaagactccaatactttgg-acgacatcttaca 23838191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 19399662 - 19399730
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt-tacaacttagaccaa 182  Q
    |||||||| |||||||||| | |||||||||||||| | ||| ||||||||||  ||||||||||||||    
T  19399662 gacaacattaacaacttaaaattccaatactttggatcaacatcttacaacttaaacaacttagaccaa 19399730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 31735844 - 31735796
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||| ||||||||||||||| |||||||||||||    
T  31735844 gactccaatatcttggaacaacaacttacaactttgcaacttagaccaa 31735796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 14979543 - 14979496
Alignment:
Q  236 caacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||||  || || |||||||||||||||||||||    
T  14979543 caacataacaatattaatgaaaatcaccaacaacttaaacatcataca 14979496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 15895888 - 15895998
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||| ||||||||   ||||||||||||||||||| ||| |||| ||| ||  | |||||||  | |  |||||||| || |||||||    
T  15895888 caacttggacaacatcgacaacttatatgactccaatactttggaacaacatcttataaccttgtagcttagactgaaacttgcaacttaattaatattc 15895987  T
Q  206 aacaacaacag 216  Q
    |||||||||||    
T  15895988 aacaacaacag 15895998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 15687952 - 15687912
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaat 142  Q
    ||||| ||||||||| ||||| |||||||||||||||||||    
T  15687952 cttcaacaacttagataacattaacaacttaagactccaat 15687912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 19362389 - 19362437
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||| ||||| ||||||| || |||||| |||||||||||||    
T  19362389 caacttagacatcatcatcaacttaggattccaatgctttggaacgaca 19362437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 24551201 - 24551153
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||  ||||||||||||||||||||||| |||||    
T  24551201 gactccaatatcttggaataacaacttacaactttacaacttaaaccaa 24551153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 1576 - 1401
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  1576 caacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 1477  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||    
T  1476 cagcaacaaaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaactttaacatcataca 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 48520348 - 48520523
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||||||    
T  48520348 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttgcaactttacaatttagaccaacacctgcaacttgatcaatattcaa 48520447  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |  ||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  48520448 cggcaatagaaacagcacaagcaattcacaacatatcaatattaatgagaagcatcaacaacttaaacattataca 48520523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 29764571 - 29764389
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  29764571 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaa 29764472  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||    
T  29764471 tattcaacagcaacagaaacaacacaagcaattcacaacataacaatattaattgaaaacatcaacaacttaaacatcataca 29764389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 12271385 - 12271566
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  12271385 cttcaacaacttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 12271484  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||||||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||||||||||    
T  12271485 atgcaacagcaacagaaacagtacaagcaattcacagcataacaaaattaatgaaaagtatcaacaacttaaacatcataca 12271566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 50000593 - 50000774
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  50000593 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttaccacttagaccaacacctgcaacttgatcaat 50000692  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||||||||| || |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  50000693 atgcaacagcaacagaaatagcacaagcaattcacaacataacaatattaatgaaaatcatcaacaacttaaacatcataca 50000774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 92 - 283
Target Start/End: Original strand, 48603263 - 48603464
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaata----------ctttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||    
T  48603263 acatcatcatcttcaacaacttagacaacatcaacaacttaagactccaatacttttgaatactttggaacgacaacttacaacttaacaacttagacca 48603362  T
Q  182 atatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    | | |||||||||||||||||||||| | |||||||||||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  48603363 acacctgcaacttgatcaatattcaatagcaacagaaacagcacaagcaatttccatcataacaatattaatgtgaagcatcaacaacttaaacatcata 48603462  T
Q  282 ca 283  Q
    ||    
T  48603463 ca 48603464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 27653522 - 27653333
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||| |||          ||||||||||||||||| |||||||||||| |||||||     
T  27653522 cttcaacaacttagacaacattatcaacttaagactccaatactttgaaacactttggaaagacaacttacaactttataacttagaccaacatctgcat 27653423  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27653422 cttgatcaatatgcaacaacaacagaaacagtacaaacaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcata 27653333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 51326612 - 51326804
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac-----------gacaacttacaactttacaacttagaccaatatctgca 190  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||            |||||||||||||||||||||||| ||||| | |||||    
T  51326612 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaacactttggaaagacaacttacaactttacaacttataccaacacctgca 51326711  T
Q  191 acttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
     |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  51326712 tcttgatcaatatgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 51326804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 22131205 - 22131046
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactcca----------atactttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||          |||||||||||||| ||||||||||||||||||||||||||    
T  22131205 acatcatcatcttcaacaacttagacaacatcaacaacttaagactccagtactttggaatactttggaacgagaacttacaactttacaacttagacca 22131106  T
Q  182 atatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacat 241  Q
    | | ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  22131105 acacctgcaacttaatcaatattcaacagcaacagaaacagcacaagcaattcacaacat 22131046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 20316471 - 20316619
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||| ||||||||||||||||    
T  20316471 caacttagacaacatcaacaacttatatgactccaatactttggaacgataacttacaactttacaatttagaccaacacctgaaacttgatcaatattc 20316570  T
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatg 254  Q
    |||| |||||||||||| ||||||||||||||||||  |||||| ||||    
T  20316571 aacagcaacagaaacagcacaagcaattcacaacatgtcaatatcaatg 20316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 46198590 - 46198476
Alignment:
Q  169 acaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaa 268  Q
    |||||||||||||| | |||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||  |||| |||||||    
T  46198590 acaacttagaccaacacctgcaacttgatcaatatgcaacagcaacagaaacaacacaagcaattcacaacataacaatattaatgaaaagcctcaacaa 46198491  T
Q  269 cttaaacatcataca 283  Q
    |||||||||||||||    
T  46198490 cttaaacatcataca 46198476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 33797456 - 33797533
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33797456 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagtatcaacaacttaaacatcataca 33797533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 1925396 - 1925319
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  1925396 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 1925319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 20924410 - 20924333
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  20924410 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 20924333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 25263133 - 25263060
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaactt 175  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25263133 cttcaacaacttagacaacataaacaacttaagactccaatactttggaaagacaacttacaactttacaactt 25263060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 43630424 - 43630344
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  43630424 cttcaacaacttagaaaacattaacaacttaagactccaatactttggaaagataacttacaactttacaacttagaccaa 43630344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 8882098 - 8882172
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||| |||||||||  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  8882098 caacgtagacaacactaacaacttaagactccaatactttgaaaagacaacttacaactttacaacttagaccaa 8882172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 20229076 - 20229003
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  20229076 aacagcaacagaaacagcacaagcaattcacaacataacaatattattatgaagtatcaacaacttaaacatca 20229003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 1010584 - 1010635
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1010584 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 1010635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 16375704 - 16375653
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16375704 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 16375653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 21407216 - 21407267
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21407216 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 21407267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 23967676 - 23967735
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23967676 caacttggacaacatcgacaacttaagactccaatactttggaacgacaacttacaactt 23967735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 10492089 - 10492015
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaactta 176  Q
    ||||| ||| ||||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  10492089 cttcaacaatttagacaacattaacaacttacgattccaatactttggaaagacaacttacaactttacaactta 10492015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 11809541 - 11809476
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  11809541 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaatacaacttacaactt 11809476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 23072993 - 23073058
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  23072993 cttcaacaacttagacaacatcaacaacttaagtctccaatactttggaacgataaattacaactt 23073058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 14800491 - 14800546
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14800491 caacttggacaacatcaacaacttaagactccaatactttggaacgacatcttaca 14800546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 14809365 - 14809420
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14809365 caacttggacaacatcaacaacttaagactccaatactttggaacgacatcttaca 14809420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 20958070 - 20958129
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  20958070 caacttggacaacatcaacaacttaagactccaatactttggaacgaaatcttacaactt 20958129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 21043440 - 21043385
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21043440 caacttggacaacatcaacaacttaagactccaatactttggaacgacatcttaca 21043385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 48520294 - 48520353
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  48520294 caacttggacaacatcgacaacttaagactccaatactttggaacggcaacttacaactt 48520353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 52639402 - 52639453
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52639402 gcaattcacaacataacaatattaatgtgaagcatcaacaacttagacatca 52639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 636158 - 636042
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaacttgatc 198  Q
    ||||||||||||||||| ||||||||| |||||||||||||||           |||||||||||||||||||||||||||||| |  | ||||||||||    
T  636158 aacttagacaacatcaagaacttaagaatccaatactttggaatactttagaaagacaacttacaactttacaacttagaccaacacgtacaacttgatc 636059  T
Q  199 aatattcaacaacaaca 215  Q
    ||||| ||||| |||||    
T  636058 aatatacaacagcaaca 636042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 20316417 - 20316476
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  20316417 caacttggacaacatcgacaacttaagactctaatactttggaacgacaactcacaactt 20316476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 28312476 - 28312531
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  28312476 caacttggtcaacatcaacaacttaagactccaatactttggaacgacatcttaca 28312531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 13881541 - 13881490
Alignment:
Q  232 ttcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  13881541 ttcacaacataacaatattaatgaaaagcaccaacaacttaaacatcataca 13881490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 45754559 - 45754635
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||   || |||||||  ||||||| ||||||||||||||| |||||||||||||    
T  45754559 caacttagacaacttcaacaacttatatgattccaatatcttggaacaacaacttacaactttgcaacttagaccaa 45754635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 47190566 - 47190607
Alignment:
Q  111 cttagacaacatcaacaacttaagactccaatactttggaac 152  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  47190566 cttagataacatcaacaacttaagactccaatactttggaac 47190607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 20438152 - 20438097
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | |||||||||||||| |||||||||||||||||| |||||| ||||||    
T  20438152 caacttggtcaacatcaacaactgaagactccaatactttgggacgacatcttaca 20438097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 22124247 - 22124294
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgac 155  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||    
T  22124247 caacttagccaacatcaacaacttatgactccaacactttggaacgac 22124294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 7052997 - 7052908
Alignment:
Q  108 caacttagacaacatc-aacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| || |||||||  || ||||||||||  ||||||| |||||||||||||| ||||||| |||||| || ||||||||    
T  7052997 caacttagacaacttccaacaactcatatgactccaatatcttggaacaacaacttacaacttgacaactttgaccaacatatgcaactt 7052908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 24726428 - 24726503
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| || ||||||||   ||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  24726428 caacttagacaac-tccacaacttatatgactccaatatcttggaataacaacttacaactttacaacttagaccaa 24726503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 38057571 - 38057514
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    |||||||  ||||||  ||||||||||||||||||||||||||||| || ||||||||    
T  38057571 tccaatatcttggaataacaacttacaactttacaacttagaccaacatttgcaactt 38057514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 8276913 - 8276865
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  8276913 gactccaatatcttggaataacaacttacaactttacaacttagaccaa 8276865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 51476108 - 51476156
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||| ||||||||||||||| |||||||||||||    
T  51476108 gactccaatatcttggaacaacaacttacaactttgcaacttagaccaa 51476156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 13301891 - 13301979
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || |||||||| |  ||||||| ||||||||||||||  | |||| ||||||||  ||||||||    
T  13301891 caacttagacaacttcaacaacttatacgactccaacatcttggaacaacaacttacaacttagcgactttgaccaatacttgcaactt 13301979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 131; Significance: 5e-68; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 125782 - 125967
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaata----------ctttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  125782 caacttagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgat 125881  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  125882 caatattcaacagcaacagaaacagcacaagcaattcacaacataacaatattaatgagaagcatcaacaacttaaacatcataca 125967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 125735 - 125787
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  125735 gacaacatcgacaacttaagactccaatactttggaacgacaacttacaactt 125787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 38310 - 38266
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaac 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38310 caacttagacaacatcaacaacttaagactccaatactttggaac 38266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 170039 - 169858
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| |||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  170039 cttcaacaacttagacaaaattaagaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 169940  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||  ||||  |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  169939 atgtaacagtaacagaaacagtacaagcaattcacaacataacaatattaatgaagagcatcaacaacttaaacatcataca 169858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 10340 - 10521
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||    
T  10340 cttcaacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatgaa 10439  T
Q  201 tattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  10440 tattcaacagcaacagaaatagcacaagcaattcacaacataacaatattaatgaaaagcatcaaaaac-taaacatcataca 10521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 7192 - 7011
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7192 cttcaacaacttagacaacattaacaacttaagactccaattcttttgaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 7093  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| |||||||||||||||||||||| |||| | ||||| ||||||||   ||||||||||||||||||||||||||    
T  7092 atgcaacagcaacagaaacagtacaagcaatacacatcgtaacagtattaatgaagagcatcaacaacttaaacatcataca 7011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 24885 - 24706
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||||||||| || || | ||||||||||||||||    
T  24885 cttcaacaatttagacaacattaacaacttaagactccaatactttggaaagacaacttcaaactttacaacttaaac-aacacctgcaacttgatcaat 24787  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  24786 atgcaacaacaacagaaacagtacaagcaattcagaacataacaatattaatg-aaagcatcaacaacttaaacatcataca 24706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 102 - 254
Target Start/End: Original strand, 78234 - 78386
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  78234 cttcaacaacttagacaacattaacaacttaagactccaatactttggaaagacagcttacaactttacaacttagaccaacacctgcaacttgatcaat 78333  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatg 254  Q
    || ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  78334 atgcaacagcaacagaaacagtacaagcaattcacaacatagcaatattaatg 78386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 1534 - 1359
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  1534 caacttggacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaacttagaccaacacttgcaacttgatcaatattcaa 1435  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || |||||||||||| |||||||||||||| |||||||||||||| |  || || | ||||||| |||||||||||    
T  1434 cagcaacagaaacagcacaagcaattcacatcataacaatattaacgataaacaaccacaacttcaacatcataca 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 112 - 279
Target Start/End: Original strand, 4160 - 4327
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaac 211  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||||||||| ||||| |    
T  4160 ttagacaacattaacaacttaagactccaatactttggaaagacaacttacaattttacaacttagaccaacacctgcaatttgatcaatatgcaacagc 4259  T
Q  212 aacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||  |||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  4260 aacagaaacaacacaagcaattcacaacataacaatattaatgaaaaacatcaacaacttaaacatca 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 112 - 279
Target Start/End: Original strand, 4160 - 4327
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaac 211  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||||||||| ||||| |    
T  4160 ttagacaacattaacaacttaagactccaatactttggaaagacaacttacaattttacaacttagaccaacacctgcaatttgatcaatatgcaacagc 4259  T
Q  212 aacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||  |||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  4260 aacagaaacaacacaagcaattcacaacataacaatattaatgaaaaacatcaacaacttaaacatca 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 14843 - 15009
Alignment:
Q  117 caacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacag 216  Q
    |||||| | |||||| ||| ||| ||||||| ||| ||||||||| |||||| ||| || || ||| |  ||| ||||||||||||| ||||| ||||||    
T  14843 caacattatcaactttagagtccgatacttttgaaagacaacttataacttttcaaatttgagcaacacgtgcgacttgatcaatatgcaacagcaacag 14942  T
Q  217 aaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||| |||||||||  || |||| ||||||| |||   ||| || ||||||| |||||||||||    
T  14943 aaacagtgcaagcaattttcatcatatcaatatttatggagagcgtctacaactttaacatcataca 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 108 - 278
Target Start/End: Complemental strand, 13670 - 13490
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa----------cgacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    |||||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||| |  |||||||||||    
T  13670 caacttagacaacatcaacaactttagactccaatactttggaatactttggaacgacaacttacaactttacaacttagaccaacacatgcaacttgat 13571  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatc 278  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13570 caatattcaatagcaacagaaacagcacaagcaattcacaacataacaatattaatgagaagcatcaacaacttaaacatc 13490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 13707 - 13665
Alignment:
Q  125 acaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  13707 acaacttaagactccaatactttggaatgacaacttacaactt 13665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 3013 - 2822
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||| | ||||||    
T  3013 cttcaacaacttagacaacattaacaacttaagaatccaatactttggaacactttggaaagacaacttacaactttacaacttagaccaacacctgcaa 2914  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  2913 cttgatcaatatgcaagagcaacagaaacagtacaagcaattcacaacataacaatattaatgaaaagcaccaacaacttaaacatcataca 2822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 268 - 427
Alignment:
Q  122 tcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaaca 221  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||||||    
T  268 tcaacaacttaagactataatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaatagaaaca 367  T
Q  222 gtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    | ||||| ||||||| || ||||||||||||||  |||||||||||||||||||||||||    
T  368 gcacaagaaattcacgacgtaacaatattaatgaaaagcatcaacaacttaaacatcata 427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 112; Significance: 1e-56; HSPs: 5)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 119877 - 120020
Alignment:
Q  140 aatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaac 239  Q
    ||||||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  119877 aatactttggaacgacaacttacaactatacaacttagacaaacacctgcaacttgatcaatattcaacagcaacagaaacagcacaagcaattcacaac 119976  T
Q  240 ataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  119977 ataataatattaatgagaagcatcaacaacttaaacatcataca 120020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 117193 - 117250
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 165  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  117193 caacatagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 117250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 117139 - 117196
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 165  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  117139 caacttggacaacatcgacaacttaagactccaatactttggaactacaacttacaac 117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 119802 - 119847
Alignment:
Q  113 tagacaacatcaacaacttaagactccaatactttggaacgacaac 158  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  119802 tagacaacatcaacaacttaagactccaatactttgaaatgacaac 119847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 119842 - 119878
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaa 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  119842 gacaacatcaacaacttaagactccaatactttggaa 119878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 131 - 283
Target Start/End: Original strand, 5606 - 5759
Alignment:
Q  131 taagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagc 229  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||| |||||||||||  ||||||    
T  5606 taagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaatattcaacagcaacagaaacatcacaagc 5705  T
Q  230 aattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  5706 aattcacaacataactatattaatgaaaagcatcaacaacttaaacatcataca 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 2174 - 1983
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacg----------acaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||||||||           ||||||||||||||||||||||||||||| | ||| ||    
T  2174 cttcaacaacatagacaacattaacaacttaagacttcaatactttggaacactttgcaaatacaacttacaactttacaacttagaccaacacctgtaa 2075  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  2074 cttgatcaatatgcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgaaaagtatcaacaacttaaacatcataca 1983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 85417 - 85555
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  85417 actttggaaagacaacttacaactttacaacttagaccaacacctgcatcttgatcaatatgcaacagcaacagaaacagtacaagcaattcacaacata 85516  T
Q  243 acaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  85517 acaatattaatgaaaagcatcaacaacttaaacatcata 85555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 85371 - 85414
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaa 151  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  85371 caacttagacaacattaacaacttaatactccaatactttggaa 85414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 127 - 283
Target Start/End: Original strand, 33061 - 33218
Alignment:
Q  127 aacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtac 225  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||| |||||||||||  ||    
T  33061 aacttaagactccaatactttggaacgacaacttacaacttagacaacttaaaccaacatctgcaacttgatcaatattcaacagcaacagaaacaacac 33160  T
Q  226 aagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| ||||||||||||||||||   ||||||||||||||| |||||||||||    
T  33161 aagcaattctcaacataacaatattaattaaaagcatcaacaactttaacatcataca 33218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 109 - 283
Target Start/End: Original strand, 365 - 549
Alignment:
Q  109 aacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaacttgatc 198  Q
    |||||||||||||| |||||||||||||||||||| ||||||||          ||||||||||||||||||| |||||||||| | |||||||||||||    
T  365 aacttagacaacattaacaacttaagactccaatagtttggaacacttttgaaagacaacttacaactttacagcttagaccaacacctgcaacttgatc 464  T
Q  199 aatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  465 aatatgcaacagcaacagaaacagtacaaacaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcgtaca 549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 3627 - 3436
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaa 191  Q
    ||||| ||||||||||||||  |||||||||||||| ||||||||||||||          || ||| || |||||||||||||||||||| ||||||||    
T  3627 cttcaacaacttagacaacaataacaacttaagacttcaatactttggaacactttggaaagaaaacatagaactttacaacttagaccaacatctgcaa 3528  T
Q  192 cttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  3527 cttgatcaatatgcaacagcaacagaaacagtacaagcaattcacaacataacaatattaatgaaaaacatcaacaacttaaacatcataca 3436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 70754 - 70581
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  70754 cttcaacaacttagacaacattaacaacttaagactccaatacttttgaaagacaacttacaattttacaacttagaccaacacctgcaacttgatcaat 70655  T
Q  202 attcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    ||       |||||||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  70654 at------gcaacagaaacaacacaaacaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcata 70581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 124 - 283
Target Start/End: Complemental strand, 22680 - 22520
Alignment:
Q  124 aacaacttaagactccaatactttggaacgacaacttacaacttt-acaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacag 222  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||| || || |||||||||||||| ||||||||||| ||||| ||||||    
T  22680 aacaacgtaagactccaatactttggaacgacaacttacaacttagacaacttaaacaaacatctgcaacttgataaatattcaacagcaacaaaaacag 22581  T
Q  223 tacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
     |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  22580 cacaaacaattcacaacataacaatattaatgaaaagcatcaacaacttaaacatcataca 22520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 17075 - 17027
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  17075 caacttagacaacatcatcaacttaggactccaatactttggaacgaca 17027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 26187 - 26147
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttg 148  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  26187 caacttagacaacatcatcaacttaggactccaatactttg 26147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 1435 - 1274
Alignment:
Q  122 tcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaaca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||    |||||||||||||||||| |||| |||||||||||    
T  1435 tcaacaacttaagactccaatactttggaacgacaacttacaactttaaaacttaggtcaacccatgcaacttgatcaatattgaacagcaacagaaaca 1336  T
Q  222 gtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
      |||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  1335 acacaagcaattcacaacttaacaatattaatgaaaagcatcaacaatttaaacatcataca 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 8186 - 8025
Alignment:
Q  122 tcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaaca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||    |||||||||||||||||| |||| |||||||||||    
T  8186 tcaacaacttaagactccaatactttggaacgacaacttacaactttaaaacttaggtcaacccatgcaacttgatcaatattgaacagcaacagaaaca 8087  T
Q  222 gtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
      |||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  8086 acacaagcaattcacaacttaacaatattaatgaaaagcatcaacaatttaaacatcataca 8025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 15568 - 15753
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaac----------gacaacttacaactttacaacttagaccaatatctgcaacttgat 197  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||          |||||||||||||||||||| || |||||| |  |||||||||||    
T  15568 caacttagacatcattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaaattcgaccaacacttgcaacttgat 15667  T
Q  198 caatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  15668 caatatgcaacagcaacagaaacaatacaagcaattcacaacataacaatattaatgaaaagcaccaacaacttaaacatcataca 15753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 15417 - 15591
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||    
T  15417 caacttggacaacatcaacaacttaagaatccaatactttggaacgacaacttacaac-ttacaacttagaccaacacctgcaacttgattaatattcaa 15515  T
Q  208 caacaaca-gaaacagtac--aagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    |||||  | ||||||| ||  |||||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||    
T  15516 caacattaggaaacagcacataagcaattcacatcataacaatatcaatgataagcatcaacaacttcaacatcat 15591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 273
Target Start/End: Original strand, 7670 - 7837
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||||||||||| |||||||||| ||||| ||| | ||||||||||||||||||||    
T  7670 caacttagacaacaccaacaacttatatgactccaatactttggaacgacaacttataactttacaatttagagcaacacctgcaacttgatcaatattc 7769  T
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaa 273  Q
    |||| |||||||||||  |||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  7770 aacagcaacagaaacaacacaaacaattcacaacatgtcaatattaatgagaagcatcaaccacttaa 7837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 7616 - 7675
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||    
T  7616 caacttggacaacatcgacaacttaagactccaatactttggaatgaccactcacaactt 7675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 143 - 283
Target Start/End: Complemental strand, 10333 - 10193
Alignment:
Q  143 actttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacata 242  Q
    ||||||||| |||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||    
T  10333 actttggaaagacaacttacaactttgcaacttagaccaacacctgcaacttgatcaatatgcaacagcaacaaaaacagtacaagcaattcacaaaata 10234  T
Q  243 acaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||  |||||||||||||||||||||||||||    
T  10233 acaaaattaatgaaaagcatcaacaacttaaacatcataca 10193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 36142 - 36197
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  36142 caacttggacaacatcaacaacttaagactccaatactttggaaagacatcttaca 36197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 10584 - 10493
Alignment:
Q  109 aacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatc 198  Q
    ||||| ||||||||||||||| ||   ||||||||||  ||||||| |||||||||||||| ||||||| ||| || || ||||||||||||    
T  10584 aacttggacaacatcaacaacatatatgactccaatatcttggaacaacaacttacaacttgacaactttgactaacatatgcaacttgatc 10493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 15560 - 15523
Alignment:
Q  246 atattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  15560 atattaatgcgaagcatcaacaacttaaacatcataca 15523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 21018 - 21178
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||               |||||||||| | |||||||||||| |||||||||    
T  21018 caacttagacaacatcaacaacttaagactccaatactttggaacgacaa---------------cttagaccaacacctgcaacttgattaatattcaa 21102  T
Q  208 caacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    || ||||| ||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  21103 cagcaacaaaaatagcacaagcaattcacaacataacaatattactgagaagcatcaacaacttaaacatcataca 21178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 20964 - 21023
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  20964 caacttggacaacatcgacaacttaagactccaatactttggaacaacaacttacaactt 21023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 20671 - 20774
Alignment:
Q  140 aatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaac 239  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20671 aatactttggaacgacaacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacagaaacagcacaagcaattcacaac 20770  T
Q  240 ataa 243  Q
    ||||    
T  20771 ataa 20774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 7570 - 7490
Alignment:
Q  137 tccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacaga 217  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| ||||||||||||||||||||||    
T  7570 tccaatactttggaactacatcttacaactttgtaacttagaccaacacttgcaacttaatcaatattcaacaacaacaga 7490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 21782 - 21894
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  21782 cttcaacaacttagataacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacctgcaacttgatcaat 21881  T
Q  202 attcaacaacaac 214  Q
    || ||||||||||    
T  21882 atgcaacaacaac 21894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 132879 - 132933
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  132879 caacttggtcaacatcaacaacttaagactccaatactttgg-acgacatcttaca 132933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 474 - 571
Alignment:
Q  186 ctgcaacttgatcaatattcaacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  474 ctgcaacttgatcaatatgcaacagcaacagaaacagtacaagcaattcacaacataataatattaatgaagagcatcaacaacttaaacatcataca 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 3514 - 3632
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactccaata----------ctttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  3514 acatcatcatcttcaacaacttagacaacatcaacaacttaagactccaatactttcgaatactttggaacgacaacttacaactttacaacttagacca 3613  T
Q  182 atatctgcaacttgatcaa 200  Q
    | | |||||||||||||||    
T  3614 acacctgcaacttgatcaa 3632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 7578 - 7696
Alignment:
Q  92 acatcatcatcttcatcaacttagacaacatcaacaacttaagactcc----------aatactttggaacgacaacttacaactttacaacttagacca 181  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||          |||||||||||| |||||||||||||||||||||||||||||    
T  7578 acatcatcatcttcaacaacttagacaacatcaacaacttaagactccaatactttagaatactttggaaagacaacttacaactttacaacttagacca 7677  T
Q  182 atatctgcaacttgatcaa 200  Q
    | | |||||||||||||||    
T  7678 acacctgcaacttgatcaa 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 6854 - 6931
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6854 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 20396 - 20319
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20396 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 20319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 71236 - 71313
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  71236 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 71313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 31058 - 31135
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31058 aacagcaacagaaacagcacaagcaattcaaaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 31135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 7512 - 7679
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||        |||||||| ||||||| |  ||||||||||| |||||||||    
T  7512 caacttggacaacatcaacaacttaagaatccaatactttggaacgacaac--------ttacaactcagaccaacacttgcaacttgattaatattcaa 7603  T
Q  208 caacaaca-gaaacagtac--aagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    || ||| | ||||||  ||  |||||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||    
T  7604 cagcaataggaaacaacacataagcaattcacagcataacaatatcaatgataagcatcaacaacttcaacatcat 7679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 41 - 171
Alignment:
Q  159 ttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaaca------gaaacagtacaagcaattcacaacataacaatattaa 252  Q
    |||||||||||||| ||||||||| | |||||||||| | ||||| ||||| |||||      |||||||||||| ||||||||||||||||||||||||    
T  41 ttacaactttacaaattagaccaacacctgcaacttgcttaatatgcaacagcaacagaaacagaaacagtacaaacaattcacaacataacaatattaa 140  T
Q  253 tgtgaagcatcaacaacttaaacatcataca 283  Q
    ||  ||||| |||||||||||||||||||||    
T  141 tgaaaagcaccaacaacttaaacatcataca 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 17 - 49
Alignment:
Q  143 actttggaacgacaacttacaactttacaactt 175  Q
    ||||||||| |||||||||||||||||||||||    
T  17 actttggaaagacaacttacaactttacaactt 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 5693 - 5623
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5693 ttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaa 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 720 - 790
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  720 ttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaa 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 7763 - 7840
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagac 179  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  7763 cttcaacaacttagacaacattaacaactaaagactccaatactttggaaagacaacttacaactttacaacttagac 7840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 234 - 311
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  234 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 11768 - 11691
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  11768 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaacttaaacatcataca 11691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 207769 - 207692
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  207769 aacagcaacaaaaacagcacaagcaattcacaagataacaatattaatgtgaagcatcaacaacttaaacatcataca 207692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 39205 - 39264
Alignment:
Q  224 acaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39205 acaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 39264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 11757 - 11577
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||| ||||||||   || |||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| ||||||||||    
T  11757 caacttggacaacatcgacaacttatatgattccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaatcaatattc 11658  T
Q  206 aacaacaacagaaacagtac--aagcaattcacaacataacaat-attaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||  ||| ||  |||||| |||||||||| |||| || ||||  || || ||||||||| |||||||||||    
T  11657 aacaacaacagaggcagcacgtaagcaactcacaacatatcaataatcaatgataatcaacaacaacttcaacatcataca 11577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 32927 - 32850
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  32927 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatatgaagtatcaacaatttaaacatcataca 32850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 36353 - 36276
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  36353 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 36276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 189644 - 189567
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  189644 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcataca 189567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 221357 - 221310
Alignment:
Q  116 acaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  221357 acaacatcaacaacttaagcctccaatactttggaacgacatcttaca 221310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 362728 - 362805
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagac 179  Q
    ||||| ||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  362728 cttcaacaatttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagac 362805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 14354 - 14279
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcata 281  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  14354 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatataaagtatcaacaacttaaacatcata 14279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 166627 - 166460
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaa 207  Q
    |||||| |||||||||||||| |||| | ||||||||||||||||||||| |||||||||        ||||||| |  |||| |||||  |||||||||    
T  166627 caacttggacaacatcaacaatttaataatccaatactttggaacgacaagttacaactt--------agaccaacacttgcagcttgactaatattcaa 166536  T
Q  208 caacaacag-aaacagtaca--agcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    ||||||||| ||| || |||  ||||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||    
T  166535 caacaacaggaaatagcacataagcaattcacagcataacaatatcaatgataagcatcaacaacttcaacatcat 166460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 2723 - 2658
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2723 cttcaacaacttatacaacatcaacaacttaaggctccaatactttggaacgacaacttacaactt 2658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 7987 - 8052
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7987 cttcaacaacttagacaacatcaacaacttaagactccaacactttggaaagacaacttacaactt 8052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 8044 - 8092
Alignment:
Q  167 ttacaacttagaccaatatctgcaacttgatcaatattcaacaacaaca 215  Q
    |||||||||||||||| | ||||||||| |||||||| ||||| |||||    
T  8044 ttacaacttagaccaacacctgcaactttatcaatatgcaacagcaaca 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 446445 - 446557
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||| |||  ||||||||||  |||||||||||| |  |||||||| || |||||||    
T  446445 caacttggacaacatcaacaacttatatgactccaatactttggaacaacattttacaactttgtaacttagaccaacacttgcaacttaattaatattc 446544  T
Q  206 aacaacaacagaa 218  Q
    |||||||||||||    
T  446545 aacaacaacagaa 446557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 497388 - 497436
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  497388 caacttagacaacatcaacaacttaagacttcaatactttagaacgaca 497436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 10429 - 10534
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaat 201  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||||||| ||||||        |||||||||||||||| | ||||||||||||||||    
T  10429 cttcatcattttagacaacattaacaacttaagattccaatactttggaaagacaac--------ttacaacttagaccaacacctgcaacttgatcaat 10520  T
Q  202 attcaacaacaaca 215  Q
    || |||||||||||    
T  10521 atgcaacaacaaca 10534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 5346 - 5295
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5346 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 5295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 12283 - 12334
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12283 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 12334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 67546 - 67495
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67546 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 67495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 80621 - 80562
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaa 265  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  80621 aacagcaacagaaacagcacaagcaattcacaacataacaatattaatgtgaagcatcaa 80562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 80564 - 80525
Alignment:
Q  244 caatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  80564 caatattaatgtgaagcatcaacaacttaaacatcataca 80525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 61857 - 61806
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  61857 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 61806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 65773 - 65722
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  65773 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 65722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 80554 - 80627
Alignment:
Q  206 aacaacaacagaaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||| ||||||||| || |||| ||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  80554 aacagcaacagaaatagcacaatcaattcacaacataacaatattattatgaagtatcaacaacttaaacatca 80627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 58964 - 58913
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58964 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 58913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 54973 - 55082
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| || |||||||||||||||   ||||||||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||    
T  54973 caacttggataacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattc 55072  T
Q  206 aacaacaaca 215  Q
    ||||||||||    
T  55073 aacaacaaca 55082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 56824 - 56977
Alignment:
Q  122 tcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacag-aaac 220  Q
    ||||||||||| || |||||||||||||||||||||||||||||||        ||||||| |  ||||||||||| ||||||||||| |||||| ||||    
T  56824 tcaacaacttacgaatccaatactttggaacgacaacttacaactt--------agaccaacacttgcaacttgattaatattcaacagcaacaggaaac 56915  T
Q  221 agtaca--agcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcat 280  Q
    |  |||  | ||||||||| ||||||||||| ||||  ||||||| ||||||| ||||||||    
T  56916 aacacataaacaattcacagcataacaatatcaatgataagcatcgacaacttcaacatcat 56977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 39218 - 39329
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| ||||||||||||||||||   |||||||||||||| |||| ||| |||||||||||  ||||||||| || |  |||||||| || |||||||    
T  39218 caacttggacaacatcaacaacttatatgactccaatactttagaacaacatcttacaactttgtaacttagacaaacacttgcaacttaattaatattc 39317  T
Q  206 aacaacaacaga 217  Q
    ||||||||||||    
T  39318 aacaacaacaga 39329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 311 - 362
Alignment:
Q  228 gcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatca 279  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  311 gcaattcacaacataacaatattaatgtgaagcatcaataacttaaacatca 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 47 - 114
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttta 169  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||    
T  47 cttcaacaacttagacaacactaacaacttaagactccaatactttgaaaagacaacttacaacttta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 36198 - 36132
Alignment:
Q  217 aaacagtacaagcaattcacaacataacaatattaatgtgaagcatcaacaacttaaacatcataca 283  Q
    |||||| ||| |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  36198 aaacagcacatgcaattcacaacataacaatattattatgaagtatcaacaacttaaacatcataca 36132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 885 - 809
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||   ||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  885 caacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaa 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 6189 - 6113
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| |||||||||||   ||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  6189 caacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaa 6113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 11656 - 11580
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| ||||||| |||   ||||||||||  ||| ||| |||||||||||||||| ||||||||||||    
T  11656 caacttagacaacttcaacaaattatatgactccaatatcttgaaacaacaacttacaactttataacttagaccaa 11580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 4119 - 4071
Alignment:
Q  229 caattcacaacataacaatattaatgtgaagcatcaacaacttaaacat 277  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4119 caattcataacataacaatattaatgtgaagcatcaacaacttaaacat 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 8852 - 8900
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8852 caacttagacaacatcaacaacttatgactccaatactttggaacgaca 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 8130 - 8178
Alignment:
Q  115 gacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8130 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 8178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 1856 - 1911
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  1856 caacttggacaacatcaacaacttaagactccaatactttgggacgacaccttaca 1911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 18326 - 18271
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18326 caacttggacaacatcaacaacttaagactccaatactttgggacgacatcttaca 18271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 21228 - 21311
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattcaacaacaacaga 217  Q
    |||| |||||||||||||| ||| |||||||||||  |||||||||||| |  |||||||| || |||||||||||||||||||    
T  21228 gacttcaatactttggaacaacatcttacaactttgtaacttagaccaacacttgcaacttaattaatattcaacaacaacaga 21311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 77818 - 77877
Alignment:
Q  102 cttcatcaacttagacaacatcaacaacttaagactccaatactttggaacgacaactta 161  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  77818 cttcaacaacttagacaacattaacaacttacgactccaatactttggaaagacaactta 77877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 126868 - 126923
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactt 167  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  126868 ttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactt 126923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 13067 - 12923
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaacttgatcaatattc 205  Q
    |||||| |||||| |||||||||||   ||||||||||||||||||| ||| ||||||||| |  |||||||||| | |  |||||||| || |||||||    
T  13067 caacttggacaacgtcaacaacttatacgactccaatactttggaacaacatcttacaactctgtaacttagaccgacacttgcaacttaattaatattc 12968  T
Q  206 aacaacaacagaaacagtac--aagcaattcacaacataacaata 248  Q
    |||| || ||||  ||| ||  |||||| ||||||||||||||||    
T  12967 aacatcagcagaggcagcacataagcaactcacaacataacaata 12923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 24267 - 24343
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||||||||||||||||||   |||||||||||||| |||| |||||||| ||||||  ||||||||||||    
T  24267 caacttagacaacatcaacaacttatatgactccaatactttagaactacaacttaaaactttgtaacttagaccaa 24343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 20752 - 20840
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    |||||| |||||||||||||| |||   ||||||||||||||||||| ||| |||||||||| ||||||| |||||| || ||||||||    
T  20752 caacttggacaacatcaacaatttatatgactccaatactttggaacaacatcttacaacttgacaactttgaccaacatatgcaactt 20840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 1000 - 1074
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagacca 181  Q
    |||||||||||||||||||||||  || ||||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  1000 caacttagacaacatcaacaacttatatgactccaatactttggaacaacaac-tacaactttgcaaattagacca 1074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 10125 - 10173
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  10125 caacttagacaacttcaacaacttaagactccaacactttggaacgaca 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 3219 - 3274
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  3219 caacttggacaaaatcaacaacttaagactccaatactttgggacgacatcttaca 3274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 5518 - 5594
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||| ||||||||||||||||||   ||||| ||||||||||||| ||| |||||||||||  ||||||||||||    
T  5518 caacttggacaacatcaacaacttatatgactcaaatactttggaacaacatcttacaactttgtaacttagaccaa 5594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 609 - 664
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  609 caacttggacaacaataacaacttaagactccaatactttggaacgacatcttaca 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 28389 - 28458
Alignment:
Q  115 gacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||| |||||||||||   ||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  28389 gacaacttcaacaacttatatgactccaatatcttggaacgacaacttacaactttgcaacttagaccaa 28458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 47511 - 47423
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| ||||||||| |   ||||||||||  ||| ||| |||||||||||||| ||||||| |||||| || ||||||||    
T  47511 caacttagacaacttcaacaactcacatgactccaatatcttgaaacaacaacttacaacttgacaactttgaccaacatatgcaactt 47423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 2627 - 2715
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  ||||||| |||||||||||||| ||||||| |||||  || ||||||||    
T  2627 caacttagacaacttcaacaactcatatgactccaatatcttggaacaacaacttacaacttgacaactttgaccagcatatgcaactt 2715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 2918 - 2965
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgac 155  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||    
T  2918 caacttggacaacatcaacaacttaggactccaacactttggaacgac 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 11299 - 11359
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||||||| | |||||||||||||| ||||||| |||||| || ||||||||    
T  11299 gactccaatactttggatcaacaacttacaacttgacaactttgaccaacatatgcaactt 11359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 19800 - 19756
Alignment:
Q  112 ttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  19800 ttagacaacatcatcaacttaggactccaatactttggaacgaca 19756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 60361 - 60437
Alignment:
Q  108 caacttagacaacatcaacaactta-agac-tccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| ||||||||||| | || |||||||  ||||||  |||||||||||||||||||||||||||||    
T  60361 caacttagacaacttcaacaacttatatacctccaatatcttggaataacaacttacaactttacaacttagaccaa 60437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 900 - 947
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgac 155  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||    
T  900 caacttggacaacatcaacaacttaggactccaacactttggaacgac 947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 609 - 678
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaactt 175  Q
    |||||| ||||||||||||||||||   ||| ||||||  ||||||| |||||||||||||| |||||||    
T  609 caacttggacaacatcaacaacttatatgacaccaatatcttggaacaacaacttacaacttgacaactt 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 1663 - 1710
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgac 155  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  1663 caacttagacaacatcatcaacttaggactctaatactttggaacgac 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 2880 - 2806
Alignment:
Q  110 acttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||||  ||||||||||   ||||||||||  ||||||||||||||||||||||| |||||| ||||||    
T  2880 acttagacaactccaacaacttatacgactccaatatcttggaacgacaacttacaactttgcaactttgaccaa 2806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 330 - 404
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagacc 180  Q
    ||||||| ||||| |||||||||||   ||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  330 caacttaaacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttgcaacttagacc 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 8585 - 8659
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagacc 180  Q
    ||||||| ||||| |||||||||||   ||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  8585 caacttaaacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttgcaacttagacc 8659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 9878 - 9824
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 163  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9878 caacttggtcaacatcaacaacttaagactccaatactttgg-acgacatcttaca 9824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 1126 - 1215
Alignment:
Q  108 caacttagacaacatc-aacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| || |||||||  || ||||||||||  ||||||| |||||||||||||| ||||||| |||||| || ||||||||    
T  1126 caacttagacaacttccaacaactcatatgactccaatatcttggaacaacaacttacaacttgacaactttgaccaacatatgcaactt 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 19592 - 19519
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||| ||||| || |||||||| ||||||||||  ||||||  | |||||||||||||||||||||||||||    
T  19592 caacttaaacaac-tccacaacttatgactccaatatcttggaataataacttacaactttacaacttagaccaa 19519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 15450 - 15362
Alignment:
Q  108 caacttagacaacatcaacaact--taagactccaatactttggaacgacaacttacaactttacaacttagaccaatatctgcaactt 194  Q
    ||||||||||||| |||||||||  || ||||||||||  ||||||| ||||||||| |||| |||| || |||||| || ||||||||    
T  15450 caacttagacaacttcaacaactcatatgactccaatatcttggaacaacaacttacgacttgacaaatttgaccaacatatgcaactt 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 57780 - 57828
Alignment:
Q  108 caacttagacaacatcaacaacttaagactccaatactttggaacgaca 156  Q
    ||||||||||| ||||| ||||||| ||||||||| |||||||||||||    
T  57780 caacttagacatcatcatcaacttaggactccaatgctttggaacgaca 57828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 397625 - 397673
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  397625 gactccaatatcttggaataacaacttacaactttacaacttagaccaa 397673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 4737 - 4668
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaactt 175  Q
    |||||| ||||||||| ||||||||   || |||||||||||||||| ||| |||||||||| |||||||    
T  4737 caacttggacaacatccacaacttatatgaatccaatactttggaacaacatcttacaacttaacaactt 4668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 14783 - 14714
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaactt 175  Q
    |||||||||||||||| |||| |||   || |||||||||||||||| ||| |||||||||| |||||||    
T  14783 caacttagacaacatcgacaatttatatgaatccaatactttggaacaacatcttacaacttaacaactt 14714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 3371 - 3447
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    ||||||||||||| ||| |||||||   || |||||||  ||||||| |||| |||||||||| |||||||||||||    
T  3371 caacttagacaacttcagcaacttatatgattccaatatcttggaacaacaagttacaactttgcaacttagaccaa 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 925 - 880
Alignment:
Q  134 gactccaatactttggaacgacaacttacaactttacaacttagac 179  Q
    ||||||||||  ||||||  ||||||||||||||||||||||||||    
T  925 gactccaatatcttggaataacaacttacaactttacaacttagac 880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 17513 - 17589
Alignment:
Q  108 caacttagacaacatcaacaacttaa--gactccaatactttggaacgacaacttacaactttacaacttagaccaa 182  Q
    |||||||||||||||||||||||||   ||  ||||||  ||||||| ||||||||||||||  ||||| |||||||    
T  17513 caacttagacaacatcaacaacttatacgatgccaatatcttggaacaacaacttacaacttcgcaactcagaccaa 17589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 8213 - 8241
Alignment:
Q  154 acaacttacaactttacaacttagaccaa 182  Q
    |||||||||||||||||||||||||||||    
T  8213 acaacttacaactttacaacttagaccaa 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 6633 times since January 2019
Visitors: 5769