View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0774_low_38 (Length: 264)
Name: NF0774_low_38
Description: NF0774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0774_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 35272738 - 35272958
Alignment:
| Q |
21 |
cagcacagaagtacgcacaactatatttataaacatagaacatttcaaatgacacttatctagttatttgagaggaaaaaatttattagagatatagagg |
120 |
Q |
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| T |
35272738 |
cagcaaagaagtacacacaactatatttataaacatagaacatttcaaatgacacttatctagttatttgagaggaaaaaatttattagagatatagagg |
35272837 |
T |
|
| Q |
121 |
ggaaggaaagatccttgttcctcttaatcttataacaacaatatattaactattaggatttgacgagttcagttatgaacattaaacagtgaattcaact |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35272838 |
ggaaggaaagatccttgttcctcttaatcttataacaacaatatattaactattaggatttgacgagttcagttatgaacattaaacagtgaattcaact |
35272937 |
T |
|
| Q |
221 |
aataccatcattctgtctctg |
241 |
Q |
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||||||||||||| ||||||| |
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| T |
35272938 |
aataccatcattccgtctctg |
35272958 |
T |
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