View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0774_low_39 (Length: 251)
Name: NF0774_low_39
Description: NF0774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0774_low_39 |
 | |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 42022750 - 42022513
Alignment:
| Q |
1 |
tcattacacagatcctctcctacgagattttaaaagattaggtttggatcctctcgtacgatttatctatatannnnnnncctctaacttcctcttaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
42022750 |
tcattacacagatcctctcctacgagattttaaaagattaggtttgaatcctctcgtacgatttatctatatattttttcgctctaacttcctcttaaaa |
42022651 |
T |
|
| Q |
101 |
attctctctttcataatcatcttttcattttccctcttattctccctcatctcactcacattatttttgttggagaatgatgcaagaagcataagaggat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42022650 |
attctctctttcataatcatcttttcattttccctcttattctccctcgtctcactcacattatttttgttggagaatgatgcaagaagcataagaggat |
42022551 |
T |
|
| Q |
201 |
ccaagttctaaattgaccttgatatcgtttttatcttc |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
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|
| T |
42022550 |
ccaagttctaaattgaccttgatatcgtttttatcttc |
42022513 |
T |
|
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