View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0775_low_24 (Length: 334)

Name: NF0775_low_24
Description: NF0775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0775_low_24
NF0775_low_24
[»] chr5 (46 HSPs)
chr5 (1-314)||(38433475-38433785)
chr5 (1-148)||(15068402-15068553)
chr5 (1-147)||(11917348-11917498)
chr5 (1-119)||(36177095-36177218)
chr5 (1-150)||(8408930-8409083)
chr5 (1-142)||(9160928-9161071)
chr5 (1-147)||(27886416-27886556)
chr5 (1-122)||(2226879-2227000)
chr5 (1-121)||(42544626-42544741)
chr5 (22-142)||(333293-333412)
chr5 (1-148)||(12681069-12681205)
chr5 (22-115)||(12166180-12166273)
chr5 (22-142)||(17085253-17085372)
chr5 (1-141)||(30001960-30002094)
chr5 (22-142)||(30265807-30265926)
chr5 (1-148)||(667614-667755)
chr5 (4-142)||(36103609-36103747)
chr5 (1-147)||(701162-701313)
chr5 (2-147)||(27572036-27572185)
chr5 (4-78)||(35358947-35359021)
chr5 (20-121)||(9988874-9988970)
chr5 (74-142)||(23780772-23780839)
chr5 (74-142)||(23867725-23867792)
chr5 (1-64)||(32521217-32521280)
chr5 (1-78)||(10174096-10174168)
chr5 (42-147)||(34881360-34881464)
chr5 (42-147)||(22747609-22747712)
chr5 (42-147)||(25495027-25495131)
chr5 (18-147)||(28224876-28225004)
chr5 (2-126)||(20191975-20192099)
chr5 (42-142)||(40692443-40692541)
chr5 (1-90)||(7591555-7591643)
chr5 (2-147)||(36567664-36567803)
chr5 (18-122)||(1048725-1048828)
chr5 (42-122)||(2588941-2589021)
chr5 (42-122)||(40884297-40884377)
chr5 (53-147)||(10090248-10090341)
chr5 (17-82)||(17132101-17132166)
chr5 (17-122)||(35240835-35240940)
chr5 (2-35)||(41454922-41454955)
chr5 (2-82)||(32244372-32244452)
chr5 (77-121)||(34111843-34111887)
chr5 (79-148)||(7487362-7487430)
chr5 (2-87)||(14652454-14652539)
chr5 (42-107)||(33792642-33792706)
chr5 (42-126)||(40331526-40331610)
[»] chr4 (51 HSPs)
chr4 (1-149)||(40900078-40900225)
chr4 (1-147)||(40806813-40806958)
chr4 (1-148)||(32136634-32136780)
chr4 (1-147)||(50570948-50571098)
chr4 (22-142)||(5261980-5262099)
chr4 (1-147)||(29636716-29636866)
chr4 (1-147)||(29644115-29644265)
chr4 (1-147)||(42557667-42557817)
chr4 (1-147)||(6333259-6333404)
chr4 (1-154)||(10218614-10218771)
chr4 (22-147)||(43630520-43630644)
chr4 (22-147)||(36077515-36077639)
chr4 (1-152)||(30193975-30194121)
chr4 (22-117)||(23937534-23937629)
chr4 (22-149)||(48996025-48996151)
chr4 (17-149)||(23120268-23120399)
chr4 (15-142)||(51394666-51394787)
chr4 (8-141)||(36106421-36106554)
chr4 (22-142)||(52344685-52344799)
chr4 (30-147)||(13690872-13690988)
chr4 (2-147)||(5122380-5122524)
chr4 (56-117)||(31301267-31301328)
chr4 (42-142)||(48293441-48293540)
chr4 (2-122)||(48338308-48338427)
chr4 (3-121)||(20986389-20986512)
chr4 (22-143)||(23450000-23450120)
chr4 (7-147)||(32223315-32223459)
chr4 (22-126)||(8176613-8176712)
chr4 (17-119)||(51907037-51907134)
chr4 (17-142)||(18536655-18536779)
chr4 (25-122)||(45983350-45983447)
chr4 (1-107)||(54274015-54274118)
chr4 (1-64)||(35233293-35233356)
chr4 (1-75)||(4688690-4688764)
chr4 (1-147)||(10778469-10778613)
chr4 (17-85)||(15723885-15723953)
chr4 (2-120)||(23625892-23626015)
chr4 (58-136)||(11031687-11031764)
chr4 (4-142)||(28147727-28147864)
chr4 (42-147)||(4642364-4642468)
chr4 (81-122)||(41260239-41260280)
chr4 (2-94)||(18396323-18396415)
chr4 (42-85)||(14866780-14866823)
chr4 (17-142)||(48684685-48684813)
chr4 (2-116)||(8484638-8484757)
chr4 (17-82)||(19753532-19753597)
chr4 (17-82)||(19786209-19786274)
chr4 (6-34)||(1566085-1566113)
chr4 (43-107)||(1566132-1566196)
chr4 (47-107)||(2939909-2939969)
chr4 (42-94)||(41325090-41325142)
[»] chr7 (56 HSPs)
chr7 (1-122)||(13852275-13852396)
chr7 (1-147)||(8768958-8769103)
chr7 (1-147)||(12117542-12117687)
chr7 (1-149)||(27054732-27054874)
chr7 (1-147)||(10671763-10671913)
chr7 (1-147)||(47069611-47069761)
chr7 (17-147)||(47204468-47204597)
chr7 (22-136)||(47903201-47903314)
chr7 (1-148)||(3213212-3213363)
chr7 (22-147)||(7209285-7209409)
chr7 (17-141)||(10069142-10069265)
chr7 (27-142)||(31876651-31876764)
chr7 (22-149)||(31983012-31983137)
chr7 (1-147)||(11206358-11206498)
chr7 (17-119)||(43429145-43429247)
chr7 (25-141)||(5932644-5932759)
chr7 (1-116)||(2408961-2409076)
chr7 (4-122)||(1335285-1335402)
chr7 (26-147)||(18673210-18673330)
chr7 (1-122)||(32823571-32823686)
chr7 (5-142)||(48675059-48675195)
chr7 (1-136)||(24361494-24361622)
chr7 (1-142)||(7760052-7760187)
chr7 (17-148)||(32942090-32942220)
chr7 (42-144)||(8568590-8568691)
chr7 (22-111)||(36507924-36508013)
chr7 (74-147)||(45898128-45898200)
chr7 (44-147)||(7205916-7206018)
chr7 (9-106)||(46147198-46147295)
chr7 (2-122)||(48642746-48642871)
chr7 (42-122)||(8118316-8118396)
chr7 (42-142)||(16535779-16535878)
chr7 (42-142)||(16629784-16629883)
chr7 (42-118)||(26215160-26215236)
chr7 (2-107)||(23729369-23729474)
chr7 (42-147)||(29628050-29628154)
chr7 (42-142)||(40848798-40848897)
chr7 (2-107)||(23032655-23032765)
chr7 (51-135)||(4153772-4153855)
chr7 (26-122)||(11216121-11216217)
chr7 (14-149)||(34750928-34751062)
chr7 (25-75)||(24361307-24361357)
chr7 (42-116)||(31287815-31287889)
chr7 (22-107)||(524882-524967)
chr7 (42-107)||(20334565-20334630)
chr7 (42-107)||(27456341-27456406)
chr7 (17-82)||(35820098-35820163)
chr7 (42-122)||(11834535-11834615)
chr7 (4-34)||(7697343-7697373)
chr7 (17-147)||(29211660-29211788)
chr7 (61-107)||(30079642-30079688)
chr7 (42-71)||(2308151-2308180)
chr7 (2-147)||(10338807-10338950)
chr7 (17-82)||(33434118-33434183)
chr7 (91-119)||(22366487-22366515)
chr7 (7-71)||(37375341-37375405)
[»] chr2 (30 HSPs)
chr2 (1-147)||(44979769-44979909)
chr2 (1-149)||(42785624-42785771)
chr2 (1-148)||(36413630-36413781)
chr2 (22-122)||(11375868-11375968)
chr2 (1-148)||(16578577-16578728)
chr2 (1-147)||(19937115-19937264)
chr2 (1-147)||(9811333-9811473)
chr2 (1-122)||(44035272-44035398)
chr2 (25-142)||(25298270-25298386)
chr2 (27-147)||(17916872-17916991)
chr2 (2-147)||(17762684-17762828)
chr2 (22-141)||(18356852-18356970)
chr2 (3-154)||(41461017-41461167)
chr2 (7-147)||(27301485-27301624)
chr2 (25-148)||(15320598-15320720)
chr2 (7-142)||(28790453-28790587)
chr2 (3-147)||(5862623-5862771)
chr2 (42-147)||(12041625-12041729)
chr2 (2-87)||(13193900-13193985)
chr2 (7-126)||(30761757-30761876)
chr2 (4-122)||(34910277-34910392)
chr2 (22-147)||(1330952-1331076)
chr2 (8-121)||(4657699-4657812)
chr2 (42-122)||(44085455-44085536)
chr2 (1-83)||(24725793-24725875)
chr2 (16-69)||(44986067-44986120)
chr2 (58-141)||(12884479-12884561)
chr2 (2-37)||(20985897-20985932)
chr2 (42-117)||(36075371-36075446)
chr2 (58-147)||(12841488-12841576)
[»] chr8 (32 HSPs)
chr8 (22-147)||(10661096-10661220)
chr8 (4-149)||(33068206-33068350)
chr8 (22-149)||(36910347-36910473)
chr8 (1-142)||(3006562-3006707)
chr8 (1-142)||(14549171-14549316)
chr8 (1-149)||(5803236-5803388)
chr8 (1-122)||(44672755-44672871)
chr8 (1-147)||(18170020-18170160)
chr8 (1-122)||(6200842-6200969)
chr8 (1-147)||(18633587-18633728)
chr8 (17-147)||(44336714-44336844)
chr8 (58-122)||(30392105-30392169)
chr8 (22-122)||(3681900-3681994)
chr8 (1-119)||(45366277-45366395)
chr8 (2-122)||(4785202-4785327)
chr8 (2-147)||(40436378-40436523)
chr8 (42-122)||(7428469-7428549)
chr8 (4-147)||(11218892-11219039)
chr8 (53-147)||(12883777-12883870)
chr8 (4-122)||(24682084-24682206)
chr8 (52-107)||(8036024-8036079)
chr8 (17-139)||(15272317-15272438)
chr8 (17-139)||(15452686-15452807)
chr8 (53-107)||(31497656-31497710)
chr8 (63-116)||(38926473-38926526)
chr8 (42-142)||(22811209-22811308)
chr8 (2-118)||(33565925-33566048)
chr8 (17-71)||(31497610-31497664)
chr8 (2-147)||(9012833-9012972)
chr8 (8-85)||(35688407-35688484)
chr8 (17-82)||(36340771-36340836)
chr8 (22-107)||(28073207-28073292)
[»] scaffold0059 (1 HSPs)
scaffold0059 (17-148)||(69551-69681)
[»] chr3 (39 HSPs)
chr3 (1-147)||(35402200-35402345)
chr3 (22-159)||(6004403-6004539)
chr3 (1-147)||(4669637-4669787)
chr3 (22-147)||(32880243-32880367)
chr3 (1-148)||(34794536-34794677)
chr3 (1-147)||(51149657-51149797)
chr3 (22-122)||(21586859-21586959)
chr3 (1-149)||(10369152-10369304)
chr3 (17-147)||(43030359-43030488)
chr3 (22-147)||(9827794-9827918)
chr3 (22-149)||(50562586-50562712)
chr3 (2-149)||(55467638-55467784)
chr3 (1-74)||(33360968-33361046)
chr3 (1-89)||(48032849-48032931)
chr3 (7-122)||(26758190-26758310)
chr3 (27-122)||(39097912-39098010)
chr3 (17-142)||(54121968-54122092)
chr3 (42-142)||(17144766-17144864)
chr3 (63-122)||(35532193-35532252)
chr3 (1-94)||(51191699-51191792)
chr3 (2-142)||(42363217-42363360)
chr3 (2-107)||(45915205-45915304)
chr3 (2-141)||(20846418-20846562)
chr3 (42-147)||(26291992-26292096)
chr3 (53-141)||(2832446-2832533)
chr3 (42-122)||(22257535-22257615)
chr3 (2-147)||(27054017-27054161)
chr3 (25-139)||(38652008-38652120)
chr3 (66-135)||(37044875-37044943)
chr3 (4-121)||(45629160-45629277)
chr3 (42-122)||(10481681-10481761)
chr3 (7-118)||(8557954-8558070)
chr3 (42-155)||(52631972-52632085)
chr3 (42-87)||(40483924-40483969)
chr3 (17-141)||(44650912-44651035)
chr3 (1-32)||(20038441-20038472)
chr3 (2-93)||(50578999-50579089)
chr3 (17-69)||(4554705-4554757)
chr3 (19-71)||(4669660-4669712)
[»] chr1 (48 HSPs)
chr1 (17-147)||(16529511-16529640)
chr1 (1-136)||(29388986-29389120)
chr1 (1-147)||(39256631-39256776)
chr1 (26-148)||(51252435-51252556)
chr1 (1-149)||(8211219-8211371)
chr1 (17-142)||(32953986-32954109)
chr1 (1-147)||(20493691-20493841)
chr1 (1-136)||(45691750-45691885)
chr1 (17-147)||(5155354-5155483)
chr1 (22-122)||(1161758-1161858)
chr1 (1-122)||(44918514-44918630)
chr1 (20-148)||(11898952-11899074)
chr1 (1-122)||(33474414-33474530)
chr1 (1-148)||(33910771-33910923)
chr1 (17-147)||(36203454-36203583)
chr1 (26-149)||(42789628-42789745)
chr1 (4-147)||(50471169-50471311)
chr1 (8-122)||(32910371-32910485)
chr1 (2-147)||(40095412-40095561)
chr1 (42-142)||(27507527-27507626)
chr1 (42-147)||(35980423-35980527)
chr1 (2-148)||(8165542-8165692)
chr1 (17-147)||(12973502-12973631)
chr1 (2-139)||(18309951-18310086)
chr1 (2-143)||(9962143-9962283)
chr1 (2-147)||(25559991-25560136)
chr1 (2-139)||(26345049-26345190)
chr1 (17-147)||(21685553-21685682)
chr1 (53-147)||(6248019-6248112)
chr1 (2-147)||(11074390-11074538)
chr1 (1-107)||(33769859-33769965)
chr1 (42-107)||(16537873-16537938)
chr1 (2-154)||(17651687-17651843)
chr1 (42-107)||(35980304-35980369)
chr1 (42-122)||(2490064-2490144)
chr1 (43-142)||(8268604-8268703)
chr1 (42-142)||(17988995-17989093)
chr1 (42-106)||(34914116-34914180)
chr1 (58-136)||(24629901-24629978)
chr1 (1-86)||(24911049-24911134)
chr1 (42-94)||(9330381-9330433)
chr1 (42-122)||(52828789-52828868)
chr1 (1-35)||(32954101-32954135)
chr1 (21-126)||(50153371-50153476)
chr1 (42-126)||(6694404-6694488)
chr1 (42-147)||(27350598-27350705)
chr1 (63-107)||(35992653-35992697)
chr1 (58-122)||(47984552-47984616)
[»] chr6 (29 HSPs)
chr6 (27-148)||(35040231-35040351)
chr6 (1-147)||(15859668-15859816)
chr6 (22-147)||(10590793-10590917)
chr6 (1-149)||(13810859-13811011)
chr6 (1-147)||(5874142-5874292)
chr6 (20-147)||(10494395-10494521)
chr6 (1-149)||(25136712-25136859)
chr6 (1-147)||(12270499-12270639)
chr6 (22-142)||(5287920-5288039)
chr6 (17-121)||(33550287-33550391)
chr6 (22-147)||(10391037-10391162)
chr6 (1-90)||(13801972-13802066)
chr6 (25-147)||(6266846-6266967)
chr6 (20-151)||(892355-892485)
chr6 (43-106)||(30752513-30752576)
chr6 (42-149)||(22413778-22413884)
chr6 (2-147)||(9686000-9686139)
chr6 (22-122)||(24644969-24645068)
chr6 (2-142)||(31945425-31945559)
chr6 (42-141)||(29048075-29048173)
chr6 (46-121)||(14940612-14940687)
chr6 (42-105)||(28632918-28632981)
chr6 (56-126)||(26645434-26645504)
chr6 (56-126)||(26751400-26751470)
chr6 (82-147)||(8135378-8135442)
chr6 (42-142)||(19135148-19135248)
chr6 (42-127)||(8064456-8064542)
chr6 (61-147)||(20500507-20500592)
chr6 (17-122)||(32190681-32190786)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-149)||(40570-40727)
[»] scaffold0013 (2 HSPs)
scaffold0013 (17-148)||(105971-106101)
scaffold0013 (17-148)||(128578-128708)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-156)||(5883-6032)
[»] scaffold0204 (2 HSPs)
scaffold0204 (2-122)||(25830-25949)
scaffold0204 (8-147)||(14465-14603)
[»] scaffold0688 (2 HSPs)
scaffold0688 (42-122)||(1125-1204)
scaffold0688 (42-122)||(7694-7773)
[»] scaffold0015 (1 HSPs)
scaffold0015 (17-84)||(62404-62471)
[»] scaffold0664 (1 HSPs)
scaffold0664 (2-35)||(6054-6087)


Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 38433785 - 38433475
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||    
T  38433785 accaatccaagccgcattggtttggtttggtttggaggactttttaaaaatcaaccgaaccaaactaaaccgcatgattttttatctcgcggtttgaatg 38433686  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtcaaaattcattcgaatttcattgcttgaaaaaattagtcctaccatataaa 200  Q
    |||||||||||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38433685 acttttatgctcaaaaccgaactaaa-ctgcaccgtgaacacccctagtcaaaattcattcgaatttcattgcttgaaaagattagtcctaccatataaa 38433587  T
Q  201 gaaagttcttctcttaacttagtaaagaaaacaaactaccggtaaaagataattataaagtgaaaattgctcttctcccttttatttttcttttctcatt 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  38433586 gaaagttcttctcttaacttagtaaagaaaacaaactactggtaaaagataattagaaagtgaaaattgctcttctcccttt--tttttcttttctcatt 38433489  T
Q  301 catcgatcttaaaa 314  Q
    ||||||||||||||    
T  38433488 catcgatcttaaaa 38433475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15068553 - 15068402
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  15068553 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttctctcgcggttt 15068454  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    |||||| | ||||||| ||||||||||  |||||||||||||||||| |||||    
T  15068453 ggatgattattatgcttaaaaccgaac-caaaccgcaccgcgaacacccctag 15068402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 11917498 - 11917348
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11917498 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 11917399  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  11917398 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 11917348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36177095 - 36177218
Alignment:
Q  1 accaatccaaaccgcattggtttggtttg-----gtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||| ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36177095 accaatccaagccgcattggtttggtttggttttgtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcatttttatctcgcggttt 36177194  T
Q  96 ggatgacttttatgctcaaaaccg 119  Q
    ||||||||||||||||| ||||||    
T  36177195 ggatgacttttatgctccaaaccg 36177218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8409083 - 8408930
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggat-----gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||||||||||||||||| |     |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  8409083 accaatccaaaccgcattggtttggtttggtttggtttgggtgactttttaaaaatcaaccgaaccaaaccaaaccgcatacttttttctctcgcggttt 8408984  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtc 150  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| |||||||    
T  8408983 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacacccctagtc 8408930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9161071 - 9160928
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaacca-----aaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||| |||||||||||||||||    
T  9161071 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccaaaccgcatgc-tttttatctcgcggttt 9160973  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    | ||||||||| | |||||||||||||  ||||||||||||||||||    
T  9160972 gaatgactttt-ttctcaaaaccgaac-caaaccgcaccgcgaacac 9160928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 27886416 - 27886556
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27886416 accaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatg 27886510  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||||||  |||||||||  |||||||||||||||||| ||||    
T  27886511 attattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 27886556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2226879 - 2227000
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  2226879 accaatccaaaccgcattagattggtttggtttggatgagtttttaaaaatcaaccgaaccaaaccaaaccacgttcttttttatctcgcggtttggatg 2226978  T
Q  101 acttttatgctcaaaaccgaac 122  Q
      ||||||||||||||||||||    
T  2226979 ttttttatgctcaaaaccgaac 2227000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 42544741 - 42544626
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42544741 accaatccaaaccgcattggtttggtttgg-----atgacttcttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttagatg 42544647  T
Q  101 acttttatgctcaaaaccgaa 121  Q
    |||||| ||||||||||||||    
T  42544646 acttttttgctcaaaaccgaa 42544626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 333293 - 333412
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  333293 ttggtttggtttggatgactttttaaaaatcaatcgaaccaaaccaattcgcatgcttttctatctcgcggtttggatgacttttatgctcaaaatcgaa 333392  T
Q  122 ctaaaaccgcaccgcgaacac 142  Q
    |  |||||||||||| |||||    
T  333393 c-caaaccgcaccgcaaacac 333412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12681069 - 12681205
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     |||| |||||||||||||||||||||||||||     ||||||||||||||||||||| || |||    
T  12681069 accaatccaaaccgcattggtttggtttgg-----atgaatttttaaaaatcaaccgaaccaaacca-----catgcttttttatctcgcggtctgaatg 12681158  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  12681159 acttttatgctcaaaaccgaact-aaaccgcaccgcgaacacccctag 12681205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 12166180 - 12166273
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  12166180 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatgcttttttatctcgcgattttgatgacttttatgctcaaa 12166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 17085253 - 17085372
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  17085253 ttggtttgattgggatgactttttaaaaatcaaccgaaccaaactaaatcgcatgcttttttatctcgtggtttggatgacttttatgctcaaaactgaa 17085352  T
Q  122 ctaaaaccgcaccgcgaacac 142  Q
    |  |||||||||||| |||||    
T  17085353 c-caaaccgcaccgcaaacac 17085372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 30002094 - 30001960
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||     
T  30002094 accaatccaaaccgcattggtttggtttgg-----atgactttttaaaaaacaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatt 30002000  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    | | |||||||  |||||||||  |||||||||||||||||    
T  30001999 attattatgcttgaaaccgaac-caaaccgcaccgcgaaca 30001960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 30265807 - 30265926
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||| |||||||||||||||| ||    
T  30265807 ttggtttggttttgatgactttttaaaaatcaaccgaaccaaaccaaactgcatgtttttttatcttgcggtttagatgatttttatgctcaaaaccaaa 30265906  T
Q  122 ctaaaaccgcaccgcgaacac 142  Q
    |  ||||||||||||||||||    
T  30265907 c-caaaccgcaccgcgaacac 30265926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 667614 - 667755
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||    
T  667614 accaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgtatgtttttctctctcgcggtttggatg 667708  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    | | |||||||  |||||||||  |||||||||||||||||| |||||    
T  667709 attattatgcttgaaaccgaac-caaaccgcaccgcgaacacccctag 667755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 36103609 - 36103747
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat-gcttttttatctcgcggtttggatgac 102  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||| |  ||||||||      
T  36103609 aatccaaactgcattgatttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatattttttttatctcacactttggatgta 36103708  T
Q  103 ttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  36103709 ttttatgctcaaaaccgaac-caaaccgcaccgcgaacac 36103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 701313 - 701162
Alignment:
Q  1 accaatccaaaccgcattg-----gtttggtttggtttggatgactttttaaaaa-tcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    |||||||||||||||||||     ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||||||    
T  701313 accaatccaaaccgcattgatttggtttggtttggtttggatgactttttaaaaaatcaaccgaaccaaaccaaaccacatgtttttttctctcgcggtt 701214  T
Q  95 tggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||| | |||||||  |||||||||  |||||||||||| ||||| ||||    
T  701213 tggatgattattatgcttgaaaccgaac-caaaccgcaccgcaaacaccccta 701162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 27572036 - 27572185
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||| ||||||||||||||||||||||||||||| |  || |||   ||||||  ||||||||||||||||||||||||||||||||| || |||||| |    
T  27572036 ccaacccaaaccgcattggtttggtttggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgcggttcg 27572135  T
Q  97 gatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||||||  |||||||||||||  |||||||||||| ||||| ||||    
T  27572136 gatgacttttaacctcaaaaccgaac-caaaccgcaccgcaaacaccccta 27572185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 35359021 - 35358947
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgct 78  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35359021 aatccaagccgtattggtttggtttggtttggatgactttttaaatatcaaccgaaccaaaccaaaccgcatgct 35358947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 9988874 - 9988970
Alignment:
Q  20 gtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccg 119  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||     |||| |||||||||||| ||||||||||||||||||| |||||||||    
T  9988874 gtttggtttgatttggatgactttttaaaaatcaaccgaatcaaacca-----catgtttttttatctcgtggtttggatgacttttatgttcaaaaccg 9988968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 23780839 - 23780772
Alignment:
Q  74 atgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  23780839 atgcttttttatctcgcggtttggatgacttttatgcttaaaaccgaac-caaaccgcaccgcgaacac 23780772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 23867792 - 23867725
Alignment:
Q  74 atgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  23867792 atgcttttttatctcgcggtttggatgacttttatgcttaaaaccgaac-caaaccgcaccgcgaacac 23867725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32521217 - 32521280
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaa 64  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  32521217 accaatccaaactgcattgatttggtttggtttggatgaatttttaaaaatcaaccgaaccaaa 32521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10174168 - 10174096
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgct 78  Q
    ||||||||||||||||||||||||||||||     || |||||||||||||||||| ||| |||||||||||||||||    
T  10174168 accaatccaaaccgcattggtttggtttgg-----ataactttttaaaaatcaaccaaacgaaaccaaaccgcatgct 10174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 34881360 - 34881464
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||| |||| |||||||||||  ||||||||||||||| |||||||||||||||||  |||||||| ||| | |||| ||||||||| ||    
T  34881360 ttttaaaagtcaactgaactaaaccaaaccgtttgcttttttatctcgtggtttggatgacttttagcctcaaaactgaa-ttaaactgcaccgcgagca 34881458  T
Q  142 ctccta 147  Q
    | ||||    
T  34881459 ccccta 34881464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 22747609 - 22747712
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||| ||||||||| |||||||||||   |||||||| |||||| ||||||| ||||  |||||||||||||| |||||| ||||||||||    
T  22747609 ttttaaaagtcaatcgaaccaaatcaaaccgcatgtacttttatcttgcggttcggatgac-tttagcctcaaaaccgaact-aaaccgtaccgcgaaca 22747706  T
Q  142 ctccta 147  Q
    | ||||    
T  22747707 ccccta 22747712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 25495131 - 25495027
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    ||||||||||||||||||  ||||||||| |||| ||| ||||| | ||||||| |||||||||||  |||||||||||||  ||||||||  |||||||    
T  25495131 ttttaaaaatcaaccgaaaaaaaccaaactgcatacttatttatgttgcggtttagatgacttttagcctcaaaaccgaac-caaaccgcatagcgaaca 25495033  T
Q  142 ctccta 147  Q
    | ||||    
T  25495032 ccccta 25495027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 28224876 - 28225004
Alignment:
Q  18 tggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaac 117  Q
    ||||||||||||||||||||    |||||||||  ||||||| |||||||||| ||||  || ||||||| ||| |||| |||||||||   ||||||||    
T  28224876 tggtttggtttggtttggattttattttaaaaaagaaccgaaacaaaccaaactgcatatttatttatcttgcgttttgcatgactttttgcctcaaaac 28224975  T
Q  118 cgaactaaaaccgcaccgcgaacactccta 147  Q
     ||| | |||||||||||||||||| ||||    
T  28224976 tgaa-ttaaaccgcaccgcgaacaccccta 28225004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 20191975 - 20192099
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||| ||||||||||||||||| ||| ||| ||||    |||||||| |||||||||||||| |||| | |||| ||||| |||| || |||  |||||    
T  20191975 ccaattcaaaccgcattggtttgatttagttcggattttattttaaaagtcaaccgaaccaaatcaaatcacatgttttttaatcttgcagttcagatga 20192074  T
Q  102 cttttatgctcaaaaccgaactaaa 126  Q
    ||||||   ||||||||||||||||    
T  20192075 cttttaacatcaaaaccgaactaaa 20192099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 40692541 - 40692443
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||| || ||||| ||||||| ||  |||||||||||| | ||| |||||||| ||||    
T  40692541 ttttaaaagtcaaccgaaccaaaccaaatcgcatgct-ttttatcttgcagtttgaatgacttctagcctcaaaaccgaa-tcaaatcgcaccgcaaaca 40692444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7591555 - 7591643
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgc 90  Q
    ||||||||||  ||| |||||||||||||||| ||||||||||||||||  ||||| |||||||   |||| |||| |||||||||||||    
T  7591555 accaatccaagtcgctttggtttggtttggttcggatgactttttaaaagccaaccaaaccaaattgaaccacatg-ttttttatctcgc 7591643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 36567803 - 36567664
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||||||||||||||||||||||||||  ||  ||     ||||||| |||||| |||| ||||||||||||| ||| || ||||  ||||| |||| |    
T  36567803 ccaatccaaaccgcattggtttggtttgaattttat-----tttaaaagtcaaccaaaccgaaccaaaccgcatacttattcatcttacggttcggataa 36567709  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  ||||||||| || | |||| ||||||||||||| ||||    
T  36567708 cttttaacctcaaaacc-aaatcaaacggcaccgcgaacaccccta 36567664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 1048725 - 1048828
Alignment:
Q  18 tggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaac 117  Q
    ||||||||||||||||||||    ||| |||| |||| || |||||||||||||||||| ||||||||||    |||||||||| |||||| |||||| |    
T  1048725 tggtttggtttggtttggattttatttcaaaagtcaatcggaccaaaccaaaccgcatgtttttttatct-tatgtttggatgatttttattctcaaagc 1048823  T
Q  118 cgaac 122  Q
    |||||    
T  1048824 cgaac 1048828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 2589021 - 2588941
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||  |||||   ||||||||||  ||||||| |||||    
T  2589021 ttttaaaagtcaaccaaaccaaaccaaaccgcatgtttttttatcttacggttcaaatgacttttagtctcaaaatcgaac 2588941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 40884377 - 40884297
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| || ||||||| ||||||||| |||| ||||||||||| |||||| | ||||||||||  ||||||| |||||    
T  40884377 ttttaaaagtcgaccgaactaaaccaaacagcatacttttttatcttgcggttcgaatgacttttaacctcaaaatcgaac 40884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 10090341 - 10090248
Alignment:
Q  53 aaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||| ||| |||||||||| ||| ||||||| ||||||  |||||||||||  |||||||||||||  ||||||||||  |||||| ||||    
T  10090341 aaccgaactaaatcaaaccgcatacttatttatcttgcggttctgatgacttttagcctcaaaaccgaac-caaaccgcaccatgaacaccccta 10090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 17132101 - 17132166
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    |||||||||||||||| ||||    |||||||| |||||||||||||| |||||||||| ||||||    
T  17132101 ttggtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 17132166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 35240835 - 35240940
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| ||||    |||| ||| |||||||||||||| |||||||||| |||||| | ||  ||||| |||||| |||||  |||||||    
T  35240835 ttggtttggtttggttcggattttatttttaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcggatgaattttagcctcaaaa 35240934  T
Q  117 ccgaac 122  Q
     |||||    
T  35240935 tcgaac 35240940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 41454955 - 41454922
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttgg 35  Q
    ||||||||||||||||||||||||||||||||||    
T  41454955 ccaatccaaaccgcattggtttggtttggtttgg 41454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 32244372 - 32244452
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    ||||||||||  ||||| ||||| ||||||| ||||    |||||||| |||||||||||||| |||||||||| ||||||    
T  32244372 ccaatccaaattgcatttgtttgatttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 32244452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 34111843 - 34111887
Alignment:
Q  77 cttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||    
T  34111843 cttttttatctcgcggttatgatgacttttatgttcaaaaccgaa 34111887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 7487362 - 7487430
Alignment:
Q  79 tttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    ||||||||||| || ||||||||||||||| |||||||| ||||  ||| | |||||| |||||||||||    
T  7487362 tttttatctcgtggattggatgacttttatactcaaaactgaac-caaatcacaccgcaaacactcctag 7487430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 14652539 - 14652454
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatct 87  Q
    |||| ||||| ||||||||||||||||||||  |||    |||| ||| ||||| |||||||| |||| |||||| ||||||||||    
T  14652539 ccaacccaaatcgcattggtttggtttggttcagattttatttttaaagtcaactgaaccaaatcaaatcgcatgtttttttatct 14652454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 33792706 - 33792642
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||||||||||||||||||| ||||||||| |||  || ||||||| |||||||| |||| |||||    
T  33792706 ttttaaaaatcaaccgaaccgaaccaaaccacat-attatttatcttgcggtttgaatgaatttta 33792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 40331526 - 40331610
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    |||||||| ||||||||||||||||||||| | || ||||| |||| || |||  ||| ||||| |  ||||||| |||||||||    
T  40331526 ttttaaaagtcaaccgaaccaaaccaaaccacgtgttttttcatcttgcagttcagattactttaaatctcaaaatcgaactaaa 40331610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40900078 - 40900225
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  40900078 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatg 40900177  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  40900178 acttttatgctcaaaaccgaac-caaaccgcaccgcgaacacccctagt 40900225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40806813 - 40806958
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40806813 accaatccaaactgcattggtttggtttggtttggatgattttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttatctcgcggtttggatg 40806912  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||||||||||||||  ||||| |||||| ||||| ||||    
T  40806913 acttttatgctcaaaaccgaac-caaaccacaccgcaaacaccccta 40806958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32136780 - 32136634
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||    
T  32136780 accaatccaaaccgcattggtttggtttggtttggatgaatttttaaaaatcaatcgaaccaaaccaaatcgcatgcttttttatctcgaggtttgggtg 32136681  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    ||||||||| ||||||||||||  ||||||||| || ||||| |||||    
T  32136680 acttttatgttcaaaaccgaac-caaaccgcactgcaaacacccctag 32136634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50570948 - 50571098
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50570948 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 50571047  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  50571048 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 50571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 5261980 - 5262099
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5261980 ttggtttggtttggatgactttttaaaaatcaactgaactaaaccaaaccgcatgcttttttatcttgcggtttggatgacttttatgctcaaaaccgaa 5262079  T
Q  122 ctaaaaccgcaccgcgaacac 142  Q
     | |||||||| |||||||||    
T  5262080 -tcaaaccgcatcgcgaacac 5262099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 29636866 - 29636716
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29636866 accaatccaaaccgcattggtttggtttggtttggtttggatggctttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 29636767  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  29636766 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 29636716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29644115 - 29644265
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29644115 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 29644214  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | ||||| |  |||||||||  |||||||||||||||||| ||||    
T  29644215 ggatgattattatgtttgaaaccgaac-caaaccgcaccgcgaacaccccta 29644265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 42557817 - 42557667
Alignment:
Q  1 accaatccaaaccgcattggtttggtttg-----gtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42557817 accaatccaaaccgcattggtttggtttgatttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 42557718  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | |||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  42557717 gaatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 42557667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6333404 - 6333259
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttg-----gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  6333404 accaatccaaaccgcattggtttggtttggtttgatttggatgactttttaaaaatcaacc-----aaaccaaaccgcatgcttttttatctcgcggttt 6333310  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||| ||||||||| |||||  |||||||||||||||||| ||||    
T  6333309 ggatgacttttttgctcaaaatcgaac-caaaccgcaccgcgaacaccccta 6333259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 10218771 - 10218614
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggttt-----ggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||     |||||||| | ||||||||||| ||| ||||||||||||||||||||||||||| | |||||    
T  10218771 accaatccaaaccgcattggtttggtttggttttgtttggatgactatataaaaatcaactgaatcaaaccaaaccgcatgcttttttatcttgaggttt 10218672  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtcaaaa 154  Q
     |||||||||||||||||||||||||| |||| |||||||| ||||| |||| ||||||    
T  10218671 agatgacttttatgctcaaaaccgaaccaaaa-cgcaccgcaaacacccctaatcaaaa 10218614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 43630644 - 43630520
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||| ||||    
T  43630644 ttggtttgatttggatgactttttaaaaatcaaccaaaccaaaccaaaccgcatatttttttatctcacggtttggatgacttttatactcaaaatcgaa 43630545  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  |||||||||||||||||||||||    
T  43630544 c-caaaccgcaccgcgaacactccta 43630520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 36077639 - 36077515
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| | |||||||  ||||||||    
T  36077639 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatacttttttctctcgcggtttgaatgattattatgcttgaaaccgaa 36077540  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  |||||||||||||||||| ||||    
T  36077539 c-caaaccgcaccgcgaacaccccta 36077515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 30193975 - 30194121
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgc-ttttttatctcgcggtttggat 99  Q
    ||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  30193975 accaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttttatctcacggtttgaat 30194069  T
Q  100 gacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtcaa 152  Q
    ||||||| | || ||| ||||| | |||||||||||||||||| |||| ||||    
T  30194070 gacttttttacttaaacccgaa-tcaaaccgcaccgcgaacacccctaatcaa 30194121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 23937534 - 23937629
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||| |||||||||||||||||||||    
T  23937534 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatatttttttatctcgtagtttagatgacttttatgctcaaaac 23937629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 48996151 - 48996025
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| | |||| ||||    
T  48996151 ttggtttggtttggataactttttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatttcgcggtttggatgatttttatgattaaaatcgaa 48996052  T
Q  122 ctaaaaccgcaccgcgaacactcctagt 149  Q
    |  ||||| ||| |||||||| ||||||    
T  48996051 c-caaaccacactgcgaacacccctagt 48996025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 23120268 - 23120399
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||||||||  ||||| ||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||   ||||||    
T  23120268 ttggtttggtttggtttggatgttttttttaaagtcaatcgaaccaaaccaaaccgcatgcttttttatcttgcggttcggatgacttttaccttcaaaa 23120367  T
Q  117 ccgaactaaaaccgcaccgcgaacactcctagt 149  Q
     |||| | |||||||||||||||||| ||||||    
T  23120368 tcgaa-tcaaaccgcaccgcgaacacccctagt 23120399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 51394787 - 51394666
Alignment:
Q  15 cattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaa 114  Q
    |||||||||||||||||| | | |||||||||||||||||||||| ||||||     |||||||||||||||||||||||||||||||||||||||||||    
T  51394787 cattggtttggtttggttggaaagactttttaaaaatcaaccgaatcaaacc-----gcatgcttttttatctcgcggtttggatgacttttatgctcaa 51394693  T
Q  115 aaccgaactaaaaccgcaccgcgaacac 142  Q
    ||| ||||  |||| |||||||||||||    
T  51394692 aactgaac-caaactgcaccgcgaacac 51394666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 36106421 - 36106554
Alignment:
Q  8 caaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaa-ccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    ||||||||||||||||||||||||| ||||    |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  36106421 caaaccgcattggtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaaccgcatgtttttttatcttgcggttcggatgactttt 36106520  T
Q  107 atgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |  |||||||||||||  |||||||||||||||||    
T  36106521 aacctcaaaaccgaac-caaaccgcaccgcgaaca 36106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 52344799 - 52344685
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||| || |||||||     ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  52344799 ttggtttggtttggatgactttttaaaaattaatcgaacca-----aaccgcatgcttttttatctcacggtttggatgacttttatgctcaaaatc-aa 52344706  T
Q  122 ctaaaaccgcaccgcgaacac 142  Q
    |  ||||||||||||||||||    
T  52344705 cccaaaccgcaccgcgaacac 52344685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 13690872 - 13690988
Alignment:
Q  30 gtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaacc 129  Q
    |||||||||||||||||||||||||||||| |||| ||||| | ||| ||| |||||||||||||||||||||||||||||| |||| |||||  |||||    
T  13690872 gtttggatgactttttaaaaatcaaccgaatcaaatcaaactgtatgttttattatctcgcggtttggatgacttttatgcttaaaatcgaac-caaacc 13690970  T
Q  130 gcaccgcgaacactccta 147  Q
    ||| | ||||||| ||||    
T  13690971 gcatcacgaacacaccta 13690988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 5122380 - 5122524
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||| ||| ||| |||||||||||||||||| ||||    |||| ||| |||||||||||||| |||||||||||||||||||||| | |||||  ||||    
T  5122380 ccaacccagaccacattggtttggtttggttcggattttatttttaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgtggtttatatga 5122479  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||||||||||||  |||||||||||| ||||| ||||    
T  5122480 cttttaccctcaaaaccgaac-caaaccgcaccgcaaacaccccta 5122524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 31301328 - 31301267
Alignment:
Q  56 cgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaac 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31301328 cgaaccaaaccaaaccgcatgtttttttatctcgcggtttggatgacttttatgctcaaaac 31301267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 48293441 - 48293540
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    ||||||||  ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||  |||||||||||||  |||| ||||||||||||    
T  48293441 ttttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgcggttcggatgacttttaacctcaaaaccgaac-caaactgcaccgcgaaca 48293539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 48338427 - 48338308
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||| |||||||||||| |||||||||||||||||    |||||||| |||||||||||||||||||| ||||| ||||||||||  ||||| ||||||    
T  48338427 ccaattcaaaccgcattgatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatg-ttttttatcttacggttcggatga 48338329  T
Q  102 cttttatgctcaaaaccgaac 122  Q
    ||||||  || ||||||||||    
T  48338328 cttttaaccttaaaaccgaac 48338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 20986512 - 20986389
Alignment:
Q  3 caatccaaaccgcattggtttggtttggtttggatgactttttaa-----aaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttgg 97  Q
    ||||||||||||||||||||||||||||||||| | |  |||||      || ||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  20986512 caatccaaaccgcattggtttggtttggtttggttcatattttattttataagtcaaccgaaccaaaccaaaccgcatacttgtttatcttgcggtttgg 20986413  T
Q  98 atgacttttatgctcaaaaccgaa 121  Q
    ||||||||||   |||||||||||    
T  20986412 atgacttttagcttcaaaaccgaa 20986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 23450000 - 23450120
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||| ||||| |  |||||||| | ||||||||||||||||||||||| ||| ||||||| || ||| ||||||||||||  ||||||||||||    
T  23450000 ttggtttggtgtggattatattttaaaagttaaccgaaccaaaccaaaccgcatacttatttatcttgcagttcggatgacttttaacctcaaaaccgaa 23450099  T
Q  122 ctaaaaccgcaccgcgaacact 143  Q
    || |||| ||||||| ||||||    
T  23450100 ct-aaactgcaccgcaaacact 23450120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 32223315 - 32223459
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggat--gact---ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||||||||||| |||||||||||||||| |  || |   |||||||| | ||| |||| || |||||||||||||||||||||||  || |||||||||    
T  32223315 ccaaaccgcatttgtttggtttggtttggttcagattgtgttttaaaagtaaacggaacaaatccaaaccgcatgcttttttatctttcgatttggatga 32223414  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||||||||||| | |||||||||||||||||| ||||    
T  32223415 cttttaacctcaaaaccgaa-tcaaaccgcaccgcgaacaccccta 32223459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 8176613 - 8176712
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||| ||||||||||||||||||     |||||||||||||||||||| |||||||||  | ||||| ||||||||||| |||||||  |||    
T  8176613 ttggtttggtttagatgactttttaaaaatc-----aaccaaaccaaaccgcatgcgtttttatcttacagtttgaatgacttttatcctcaaaattgaa 8176707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 51907134 - 51907037
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| |||||||||||||||| ||     ||||||||| ||||| |||||||||||||||  | || | |||||||||||||||||||    
T  51907134 ttggtttggtttggttcggatgactttttaaaagtc-----aaccaaaccgaaccgtatgcttttttatctcctgattagaatgacttttatgctcaaaa 51907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 18536655 - 18536779
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||| |||||||| ||||    |||||||| ||||||||||||| |||||| |  ||||||||||||| | ||||||||||| |||||   ||||||    
T  18536655 ttggttttgtttggttcggattgtgttttaaaagtcaaccgaaccaacccaaactgtgtgcttttttatcttgtggtttggatgaattttagcttcaaaa 18536754  T
Q  117 ccgaactaaaaccgcaccgcgaacac 142  Q
    |||||| ||||| |||| ||||||||    
T  18536755 ccgaac-aaaactgcactgcgaacac 18536779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 45983447 - 45983350
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    ||||||||||||||   |||| ||| ||||||||| |||||||||||||||| |||||||||| ||||||  ||| ||||||||  ||||| ||||||    
T  45983447 gtttggtttggatgttatttttaaagtcaaccgaatcaaaccaaaccgcatgattttttatcttgcggttcagataacttttatcttcaaagccgaac 45983350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 54274015 - 54274118
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||| |||||||||||||||||| || |  | ||||||||  |   ||||||||||||||||||||| |||| ||||| |||||| |||||    
T  54274015 accaatccaaaccacattggtttggtttggttcggttttcattttaaaagcc---cgaaccaaaccaaaccgcatgattttctatcttgcggttcggatg 54274111  T
Q  101 actttta 107  Q
    | |||||    
T  54274112 agtttta 54274118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35233293 - 35233356
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaa 64  Q
    ||||| |||| ||| ||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  35233293 accaacccaagccgtattggtttggtttggtttggacgactttttaaaagccaaccgaaccaaa 35233356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4688764 - 4688690
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 75  Q
    ||||||| ||||| ||||||||||||||||||  ||| ||||||||||| ||||||||| | |||||||| ||||    
T  4688764 accaatcaaaaccacattggtttggtttggttaagataactttttaaaagtcaaccgaatcgaaccaaactgcat 4688690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10778469 - 10778613
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||  ||||||||||||||||||| || |  | ||| ||||  ||||| ||||||| |||||||| || |||||||||| ||||||  |||     
T  10778469 accaatccaaat-gcattggtttggtttggttaggttttcatttaaaaagccaaccaaaccaaatcaaaccgcgtgtttttttatcttgcggttcagata 10778567  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||  ||||||| |||| | ||||||||||| |||||| ||||    
T  10778568 acttttaatctcaaaatcgaa-tcaaaccgcaccgtgaacaccccta 10778613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 15723953 - 15723885
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttat 85  Q
    ||||||||||||||||||||||   |||| ||| ||||||||||||||| |||| |||| |||||||||    
T  15723953 ttggtttggtttggtttggatgttatttttaaagtcaaccgaaccaaactaaactgcatacttttttat 15723885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 23625892 - 23626015
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttg-----gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||||||||||||||||| |||||||||| |||     |||    |||||||| |||| |||||||||| ||||||||| ||||||||| | | | ||||    
T  23625892 ccaatccaaaccgcattgatttggtttgggttgattcagattttattttaaaagtcaagcgaaccaaacaaaaccgcatacttttttattttgtgatttg 23625991  T
Q  97 gatgacttttatgctcaaaaccga 120  Q
    |||||||||||  || ||||||||    
T  23625992 gatgacttttaaccttaaaaccga 23626015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 11031687 - 11031764
Alignment:
Q  58 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgc 136  Q
    |||||||||||||| ||||||||||||||  ||| ||||| |||||||||  ||||||||| |||  ||||||||||||    
T  11031687 aaccaaaccaaaccacatgcttttttatcatgcgatttggctgacttttagcctcaaaacc-aacccaaaccgcaccgc 11031764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 28147864 - 28147727
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgact 103  Q
    ||||||||||||||||||||||||||| |  ||| |  |||||||| |||||  ||| |||||||||||| | ||| |||||||  |||||  |||||      
T  28147864 aatccaaaccgcattggtttggtttggatcagattatattttaaaagtcaacaaaactaaaccaaaccgcctacttatttatcttacggttcagatgatg 28147765  T
Q  104 tttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    ||||  ||||||||| || | |||| |||||||||||||    
T  28147764 tttaacctcaaaacc-aaatcaaacggcaccgcgaacac 28147727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 4642468 - 4642364
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||| ||||||||| |||||  ||| ||| ||||||| |||||| |||| |||||||  |||||||||||||  |||||| ||||| ||||    
T  4642468 ttttaaaagtcaatcgaaccaaatcaaactacatacttatttatcttgcggttcggataacttttagcctcaaaaccgaac-caaaccgtaccgccaaca 4642370  T
Q  142 ctccta 147  Q
    | ||||    
T  4642369 ccccta 4642364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 41260280 - 41260239
Alignment:
Q  81 tttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  41260280 tttatctcgcggttaggatgatttttatgctcaaaaccgaac 41260239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 18396415 - 18396323
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    |||| ||||||| |||||||||||||| ||| ||||    | |||||| ||||| |||||||||||||||||||   ||||||||| ||||||    
T  18396415 ccaacccaaaccacattggtttggttttgttcggattttatcttaaaagtcaactgaaccaaaccaaaccgcatatctttttatcttgcggtt 18396323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 14866823 - 14866780
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttat 85  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||    
T  14866823 ttttaaaagtcaactgaaccaaaccaaaccgcatgtttttttat 14866780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 48684813 - 48684685
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatc-aaccgaaccaaaccaaaccgcatgctttttt---atctcgcggtttggatgacttttatgctc 112  Q
    |||||| ||||||||| ||||||||||||  ||| | ||||||| |||| |||||| |||| ||||||   ||||||| |||  |||||| |||||||||    
T  48684813 ttggttgggtttggttcggatgactttttttaaagctaaccgaaacaaatcaaaccacatgttttttttttatctcgcagttaagatgacatttatgctc 48684714  T
Q  113 aaaaccgaactaaaaccgcaccgcgaacac 142  Q
    ||| ||||| | |||||| ||||| |||||    
T  48684713 aaagccgaa-tcaaaccgtaccgcaaacac 48684685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 8484757 - 8484638
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttgg---atgact--ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    ||||||||||||||||||||||||||| ||||||   |||  |  |||||||| ||||||||| |||  ||||||||||  || ||||||| |||||| |    
T  8484757 ccaatccaaaccgcattggtttggtttagtttggttcatgttttattttaaaagtcaaccgaatcaacacaaaccgcatagttatttatcttgcggttgg 8484658  T
Q  97 gatgacttttatgctcaaaa 116  Q
     | ||||||||  |||||||    
T  8484657 aaagacttttaacctcaaaa 8484638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 19753532 - 19753597
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    |||||||||||||||| | ||    |||||||| |||||||||||||| |||||||||| ||||||    
T  19753532 ttggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 19753597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 19786274 - 19786209
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    |||||||||||||||| | ||    |||||||| |||||||||||||| |||||||||| ||||||    
T  19786274 ttggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 19786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 1566085 - 1566113
Alignment:
Q  6 tccaaaccgcattggtttggtttggtttg 34  Q
    |||||||||||||||||||||||||||||    
T  1566085 tccaaaccgcattggtttggtttggtttg 1566113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 1566132 - 1566196
Alignment:
Q  43 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||| ||||||| ||||| ||||||||| ||| |||||||  |||||  |||||||||||    
T  1566132 tttaaaaattaaccgaatcaaactaaaccgcatacttatttatcttacggttcagatgactttta 1566196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 2939969 - 2939909
Alignment:
Q  47 aaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||| ||||||||| ||| ||||| ||||||||||| |||||| | | ||||||||    
T  2939969 aaaatcaactgaaccaaactaaatcgcatacttttttatcttgcggttcgaacgactttta 2939909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 41325142 - 41325090
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    |||||||| |||||||||  ||| |||||||||| ||| ||||||||||||||    
T  41325142 ttttaaaagtcaaccgaattaaatcaaaccgcatacttatttatctcgcggtt 41325090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13852396 - 13852275
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13852396 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatg 13852297  T
Q  101 acttttatgctcaaaaccgaac 122  Q
    ||||||||||||||||||||||    
T  13852296 acttttatgctcaaaaccgaac 13852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 8768958 - 8769103
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8768958 accaatccaaaccgcattagtttcgtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatg 8769057  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||| ||  |||||||||  |||||||||||||||||| ||||    
T  8769058 attattatacttgaaaccgaac-caaaccgcaccgcgaacaccccta 8769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12117687 - 12117542
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  12117687 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatgcttttttctctcgcggtttggatg 12117588  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||| ||  |||||||||  |||||||||||| ||||| ||||    
T  12117587 attattatacttgaaaccgaac-caaaccgcaccgcaaacaccccta 12117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 27054732 - 27054874
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27054732 accaatccaaaccgcattgg-----tttggtttggatggctttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 27054826  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||||| ||||||||||| |||  |||||||||||| ||||| ||||||    
T  27054827 acttttttgctcaaaaccaaac-caaaccgcaccgcaaacacccctagt 27054874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10671913 - 10671763
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10671913 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 10671814  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  10671813 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 10671763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 47069761 - 47069611
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47069761 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 47069662  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  47069661 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 47069611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 47204468 - 47204597
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||  |||    
T  47204468 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattgttatgcttgaaa 47204567  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||||||||||||||||| ||||    
T  47204568 ccgaac-caaaccgcaccgcgaacaccccta 47204597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 47903314 - 47903201
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  47903314 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgatttttatgcttaaaaccgaa 47903215  T
Q  122 ctaaaaccgcaccgc 136  Q
    |  ||||||||||||    
T  47903214 c-caaaccgcaccgc 47903201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 3213212 - 3213363
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3213212 accaatccaaaccgcattggtttggtttggtttgatttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 3213311  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| |||||    
T  3213312 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacacccctag 3213363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 7209285 - 7209409
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||    
T  7209285 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgtatgcttttttatctcgtggtttggatgacttttatattcaaaaccgaa 7209384  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  ||||||||| |||||||| ||||    
T  7209385 c-caaaccgcactgcgaacaccccta 7209409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 10069265 - 10069142
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||    
T  10069265 ttggtttggtttggtttgaatgactttttaaaaatcaaccgaatcaaaccaaacagcatgtttttttatatcgcggtttagatgacttttatgctcaaaa 10069166  T
Q  117 ccgaactaaaaccgcaccgcgaaca 141  Q
    ||||||  |||||||||||||||||    
T  10069165 ccgaac-caaaccgcaccgcgaaca 10069142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 31876651 - 31876764
Alignment:
Q  27 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||    
T  31876651 ttggtttgaatgactttttaaaaatcaaccgaaccgaaccaaactgcatgcttttttatttcgcggtttggatgacttttatgctcaaaaccgaac--aa 31876748  T
Q  127 accgcaccgcgaacac 142  Q
    ||||||||||||||||    
T  31876749 accgcaccgcgaacac 31876764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 31983012 - 31983137
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  31983012 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaactgcatatttttttatctcgcggtttggataacttttatgctcaaaaccgaa 31983111  T
Q  122 ctaaaaccgcaccgcgaacactcctagt 149  Q
    |   ||||||||||||||||| ||||||    
T  31983112 c--caaccgcaccgcgaacacccctagt 31983137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 11206358 - 11206498
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  11206358 accaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcggtttggatg 11206452  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||||||  |||||||||  |||||||||||||||||| ||||    
T  11206453 attattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 11206498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 43429247 - 43429145
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  43429247 ttggtttggttttgtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcgtgcatttttatctcgcggtttggatgacttttatgctccaaa 43429148  T
Q  117 ccg 119  Q
    |||    
T  43429147 ccg 43429145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 5932759 - 5932644
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaacta 124  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| |     
T  5932759 gtttggtttggatgactttttaaaaatcaacttaaccaaaccaaaccgcatgctttcttatctcgcggttcagatgacttttatgctcaaaaccgaa-tc 5932661  T
Q  125 aaaccgcaccgcgaaca 141  Q
    |||||||||||| ||||    
T  5932660 aaaccgcaccgcaaaca 5932644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2408961 - 2409076
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||| |||||||| ||||| || ||||||||||||||||  ||| |||||||||||||||| ||||||||||| |||||||||||    
T  2408961 accaatccaaaccgcattgatttggtttagtttgaataactttttaaaaatcaattgaatcaaaccaaaccgcatggttttttatctcacggtttggatg 2409060  T
Q  101 acttttatgctcaaaa 116  Q
    ||||||||||||||||    
T  2409061 acttttatgctcaaaa 2409076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 1335402 - 1335285
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgact 103  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||  | ||||||||||    
T  1335402 aatccaagccgcattgatttggtttggtttggaggactttttaaaaatcaaccgaaccaaaccaaaccaggtgcttttttatctcgtag-ttggatgact 1335304  T
Q  104 tttatgctcaaaaccgaac 122  Q
    |||||||||||||||||||    
T  1335303 tttatgctcaaaaccgaac 1335285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 18673210 - 18673330
Alignment:
Q  26 tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaa 125  Q
    |||||||||||||||||||| ||| ||||| |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  18673210 tttggtttggatgactttttgaaattcaactgaactaaaccaaatcacatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac-ca 18673308  T
Q  126 aaccgcaccgcgaacactccta 147  Q
    || |||||||||||||| ||||    
T  18673309 aatcgcaccgcgaacaccccta 18673330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 32823686 - 32823571
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||| ||||||||||     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  32823686 accaatccaaaccgcattgatttggtttgg-----atgactttttaaaaatcaaccgaaccaa-ccaaaccgcatgcttttttatctcgcgatttggatg 32823593  T
Q  101 acttttatgctcaaaaccgaac 122  Q
    ||||||||||| |||| |||||    
T  32823592 acttttatgctaaaaatcgaac 32823571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 48675195 - 48675059
Alignment:
Q  5 atccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactt 104  Q
    |||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||| ||||||||| |||  |    
T  48675195 atccaagccgcattgatttggtttggcttggatgacttcttaaaaatcaaccgaaccaaatcaaaccacgtgcttttttatcttgcggtttgggtgaaat 48675096  T
Q  105 ttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    |||||  ||||||||||   |||||||| |||||||||    
T  48675095 ttatgtccaaaaccgaa-gcaaaccgcatcgcgaacac 48675059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 24361494 - 24361622
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     |||||||||||||| ||||| ||||||||| ||||||||||||||| |||| ||||||||||| |||||| ||||    
T  24361494 accaatccaaaccgcattgg-----tttggtttggatgatttttttaaaatcaactgaaccaaaccaaaccacatgtttttttatctcacggtttagatg 24361588  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgc 136  Q
    |||||| | |||||||||||||  ||||||||||||    
T  24361589 actttt-ttctcaaaaccgaac-caaaccgcaccgc 24361622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7760187 - 7760052
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||||     ||||||||| | || |||||||||||| | |||||||||    
T  7760187 accaatccaagccgcattggtttgatttgatttagatgactttttaaaaatcaacc-----aaaccaaactggatacttttttatctcacagtttggatg 7760093  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    | |||||||||||||| |||||  ||||| ||||||||||||    
T  7760092 atttttatgctcaaaatcgaac-caaaccacaccgcgaacac 7760052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 32942090 - 32942220
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| ||||    |||||||| ||||||||| |||||||||||||||| |||||||||| || ||| ||||||||||||  |||||||    
T  32942090 ttggtttggtttggttcggattgtattttaaaagtcaaccgaatcaaaccaaaccgcatgtttttttatcttgcagttcggatgacttttaacctcaaaa 32942189  T
Q  117 ccgaactaaaaccgcaccgcgaacactcctag 148  Q
    ||||||  |||| ||||||||||||| |||||    
T  32942190 ccgaac-caaactgcaccgcgaacacccctag 32942220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 8568590 - 8568691
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||||||||| ||||||||||||| ||| ||||||| |||||| ||||||||||||  |||||||||||||  |||||||||||||||||    
T  8568590 ttttaaaagtcaaccgaaccgaaccaaaccgcatacttatttatcttgcggttcggatgacttttaacctcaaaaccgaac-caaaccgcaccgcgaaca 8568688  T
Q  142 ctc 144  Q
    |||    
T  8568689 ctc 8568691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 36508013 - 36507924
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgct 111  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| |||| |||||| |  ||||||||||||| |||||    
T  36508013 ttggtttggtttggatgactttttaaaaatcaaccgaatcaaatcaaactgcatgattttctatctcacaatttggatgactttaatgct 36507924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 45898128 - 45898200
Alignment:
Q  74 atgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||    
T  45898128 atgcttttttatctcgcggtttggatgacttttatgcacaaaaccgaac-caaaccgcaccgcgaacaccccta 45898200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 7205916 - 7206018
Alignment:
Q  44 ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacact 143  Q
    |||||||||||| |||  ||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||  ||||| ||| ||||||||     
T  7205916 ttaaaaatcaacagaataaaaacaaaccgcatgtttttttatctcgcggtttggatgacttctatgttcaaaaccgaac-caaaccacactgcgaacacc 7206014  T
Q  144 ccta 147  Q
    ||||    
T  7206015 ccta 7206018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 46147295 - 46147198
Alignment:
Q  9 aaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    ||||||||||||||||||||||||  |||    |||||||| |||||| ||||||||||| ||||||||||||||| ||  |||||| ||||||||||    
T  46147295 aaaccgcattggtttggtttggttcagattttattttaaaagtcaaccaaaccaaaccaatccgcatgcttttttaccttacggtttagatgactttt 46147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 48642871 - 48642746
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgacttttta-----aaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||| ||||||||||||||||||||||||||||| | |  ||| |     ||| |||||||||||||||||||||||||| ||||| |||| ||||||      
T  48642871 ccaacccaaaccgcattggtttggtttggtttggttcaaatttaatttttaaagtcaaccgaaccaaaccaaaccgcatgttttttaatcttgcggttca 48642772  T
Q  97 gatgacttttatgctcaaaaccgaac 122  Q
    ||||| |||||  |||||||||||||    
T  48642771 gatgaattttaccctcaaaaccgaac 48642746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 8118316 - 8118396
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| |||||| |||| | |||||  |||||||| ||||    
T  8118316 tttttaaaatcaaccgaaccaaaccaaaccacatgcttttttatcttgcggttcggataaattttaccctcaaaacagaac 8118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 16535779 - 16535878
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||||||||| ||  |||||||||| ||||||| || |||||||| ||||||||||  ||||||| |||||| |||| ||||||||||||    
T  16535779 ttttaaaagtcaaccgaacctaatgaaaccgcatgtttttttaacttgcggtttgcatgacttttagcctcaaaatcgaact-aaactgcaccgcgaaca 16535877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 16629883 - 16629784
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||||||||| ||  |||||||||| ||||||| || |||||||| ||||||||||  ||||||| |||||| |||| ||||||||||||    
T  16629883 ttttaaaagtcaaccgaacctaatgaaaccgcatgtttttttaacttgcggtttgcatgacttttagcctcaaaatcgaact-aaactgcaccgcgaaca 16629785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 26215160 - 26215236
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaacc 118  Q
    |||||||| ||||||||||||||| || ||| ||||||| |||||| |||||||||||||||||||  |||||||||    
T  26215160 ttttaaaagtcaaccgaaccaaacaaacccgtatgctttattatcttgcggtttggatgacttttaacctcaaaacc 26215236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 23729474 - 23729369
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||| |||||||| ||| |||||||||||||  |||    |||||||| ||||||||   |||||||||||||||||||||||||| |||||| ||||||    
T  23729474 ccaaaccaaaccgtattagtttggtttggttcagattttattttaaaagtcaaccgagttaaaccaaaccgcatgcttttttatcttgcggttcggatga 23729375  T
Q  102 ctttta 107  Q
     |||||    
T  23729374 ttttta 23729369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 29628154 - 29628050
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||| |||||||||| ||||||||||| ||||||| || |||||| ||||  |||||   |||||||||||||  |||||||||||||||||    
T  29628154 ttttaaaattcagccgaaccaaatcaaaccgcatgtttttttaccttgcggttcggataccttttcacctcaaaaccgaac-caaaccgcaccgcgaaca 29628056  T
Q  142 ctccta 147  Q
    | ||||    
T  29628055 ccccta 29628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 40848897 - 40848798
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||||||||||||||||||||| ||| ||||||| ||  |  || | ||||||||||  |||||||||||||  |||||||||||||||||    
T  40848897 ttttaaaagtcaaccgaaccaaaccaaaccgtatgtttttttaccttacaattcgaatgacttttaccctcaaaaccgaac-caaaccgcaccgcgaaca 40848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 23032765 - 23032655
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgacttttta-----aaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||||||||||| ||||||||||||||||||||| | |  |||||     ||| ||||||||||||||| ||||| ||| |||||||||||  |||||      
T  23032765 ccaatccaaacctcattggtttggtttggtttggttcaaattttattttaaaagtcaaccgaaccaaactaaaccacatacttttttatctttcggttca 23032666  T
Q  97 gatgactttta 107  Q
    |||||||||||    
T  23032665 gatgactttta 23032655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 4153772 - 4153855
Alignment:
Q  51 tcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccg 135  Q
    ||||||||||||||||| |||||||||||||||||| ||  ||| | ||||||||||  |||||||| ||| | |||||||||||    
T  4153772 tcaaccgaaccaaaccataccgcatgcttttttatcccgttgttcgaatgacttttagcctcaaaactgaa-tcaaaccgcaccg 4153855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 11216217 - 11216121
Alignment:
Q  26 tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||||||  |||||||||||||||| | ||  ||| |||||| |||| ||||||||||| | ||| | |||| |||||||||||||| |||||    
T  11216217 tttggtttggacaactttttaaaaatcaatcaaattaaatcaaaccacatgtttttttatctcacagttcgaatgatttttatgctcaaaatcgaac 11216121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 34751062 - 34750928
Alignment:
Q  14 gcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctca 113  Q
    |||||||||||||||| || ||||    ||||||||||||||| ||||||||||| |||||| ||||| ||| | ||| || | ||||||||||  || |    
T  34751062 gcattggtttggtttgattcggattttattttaaaaatcaaccaaaccaaaccaacccgcatacttttatatattgcgattcgaatgacttttagcctaa 34750963  T
Q  114 aaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||| ||||  |||||||| || |||||| ||||||    
T  34750962 aaactgaac-caaaccgcatcgtgaacacccctagt 34750928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 24361307 - 24361357
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 75  Q
    ||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  24361307 gtttggtttggatgattttttttaaattaaccgaaccaaaccaaaccgcat 24361357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 31287815 - 31287889
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||||  |||||  ||||||| |||  |||||||    
T  31287815 ttttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttacggttcagatgactattagcctcaaaa 31287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 524882 - 524967
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||||||||||    |||||||| |||| |||| |||||||||||||||  |||||||||| ||||||  ||| |||||||    
T  524882 ttggtttggtttggattttattttaaaagtcaatcgaatcaaaccaaaccgcatatttttttatcttgcggttcagataactttta 524967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 20334630 - 20334565
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||| ||| |||||||||||||||||||||||||  || ||||||| |||||| ||| ||||||||    
T  20334630 tttttaaagtcaaccgaaccaaaccaaaccgcatatttatttatcttgcggttcggacgactttta 20334565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 27456406 - 27456341
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||||||| ||||| |||| |||||||||||||||||||||||||   |||||  |||||||||||    
T  27456406 ttttaaaagtcaacagaactaaaccaaaccgcatgcttttttatcgtacggttcagatgactttta 27456341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 35820098 - 35820163
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    |||||||||||||||| ||||    |||||||| |||||||||||||| |||||||||| ||||||    
T  35820098 ttggtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 35820163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 11834535 - 11834615
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||||||||  ||||||||||||||||||| ||| ||||||| |  ||| |||| ||||||| || || ||||||||    
T  11834535 ttttaaaaatcaattgaaccaaaccaaaccgcatacttatttatcttgtagttcggataacttttaggcacacaaccgaac 11834615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 7697373 - 7697343
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttg 34  Q
    |||||||||||||||||||||||||||||||    
T  7697373 aatccaaaccgcattggtttggtttggtttg 7697343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 29211660 - 29211788
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| ||||    ||| ||||||| ||||||| ||||||||| ||| | |||||||||| || ||| | |||| |||||  || ||||    
T  29211660 ttggtttggtttggttcggattgtatttcaaaaatcgaccgaacgaaaccaaactgcaag-ttttttatcttgcagttcgaatgagttttagccttaaaa 29211758  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  ||| |||||||||||||| ||||    
T  29211759 ccgaac-caaatcgcaccgcgaacaccccta 29211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 30079642 - 30079688
Alignment:
Q  61 caaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||||||||||||||||||||||||||  || || ||||||||||||    
T  30079642 caaaccaaaccgcatgcttttttatcttacgattcggatgactttta 30079688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 2308151 - 2308180
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaacc 71  Q
    ||||||||||||||||||||||||||||||    
T  2308151 ttttaaaaatcaaccgaaccaaaccaaacc 2308180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 10338807 - 10338950
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||||||||||| |||| ||||||||||||  |||    |||||||| |||| |||||||||  |||||  || ||| ||||| | || ||||||||||    
T  10338807 ccaatccaaaccgaattgatttggtttggttcagattttattttaaaagtcaatcgaaccaaataaaaccaaatacttatttattttgcagtttggatga 10338906  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | ||||  ||||||||| |||  |||| ||||||||||||| ||||    
T  10338907 c-tttaccctcaaaaccaaac-caaactgcaccgcgaacaccccta 10338950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 33434183 - 33434118
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    |||||||||||||||| | ||    ||||||||||||||  ||||||||||||||||||| |||||    
T  33434183 ttggtttggtttggttcgaatttaattttaaaaatcaacaaaaccaaaccaaaccgcatgtttttt 33434118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 119
Target Start/End: Complemental strand, 22366515 - 22366487
Alignment:
Q  91 ggtttggatgacttttatgctcaaaaccg 119  Q
    |||||||||||||||||||||||||||||    
T  22366515 ggtttggatgacttttatgctcaaaaccg 22366487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37375405 - 37375341
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 71  Q
    ||||||||||||||||| |||||||| ||||    |||| ||| |||||| ||||||||||||||    
T  37375405 ccaaaccgcattggtttagtttggttcggattctatttttaaagtcaaccaaaccaaaccaaacc 37375341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 5e-56; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 44979769 - 44979909
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44979769 accaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 44979863  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||    
T  44979864 acttttatgctcaaaaccgaac-caaaccgcaccgcgaacaccccta 44979909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 42785624 - 42785771
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||| || ||||||||    
T  42785624 accaatccaaaccgcattggtttggtttggtttgaatgagtttttaaaaatcaagcgaaccaaaccaaaccgcatccttttttatctcacgatttggatg 42785723  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||||||||||||||| |||||  |||||||||||||||||| ||||||    
T  42785724 acttttatgctcaaaatcgaac-caaaccgcaccgcgaacacccctagt 42785771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 36413630 - 36413781
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36413630 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 36413729  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| |||||    
T  36413730 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacacccctag 36413781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 11375968 - 11375868
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  11375968 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatgtttttttatctcgcggtttggatgacttttatgcttaaaaccgaa 11375869  T
Q  122 c 122  Q
    |    
T  11375868 c 11375868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16578728 - 16578577
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  16578728 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaatcgaaccaaaccaaaccgcatgcttttttctctcgcggttt 16578629  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    |||||| | |||||||  |||||||||  |||||||| ||||||||| |||||    
T  16578628 ggatgattattatgcttgaaaccgaac-caaaccgcatcgcgaacacccctag 16578577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19937115 - 19937264
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttg-----gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  19937115 accaatccaaaccgcattggtttgctttggtttgatttggatgactttttaaaaatcaatcgaaccaaaccaaacc-catgtttttttatctcgcggttt 19937213  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||||||||||||||| || |||  |||||||||||||||||| ||||    
T  19937214 ggatgacttttatgctcaaatcctaac-caaaccgcaccgcgaacaccccta 19937264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 9811473 - 9811333
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9811473 accaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcggtttggatg 9811379  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||||||  |||||||||  |||||||||||||||||| ||||    
T  9811378 attattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 9811333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 44035398 - 44035272
Alignment:
Q  1 accaatccaaaccgcattggttt----ggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgc-ttttttatctcgcggttt 95  Q
    ||||||| ||||| |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||    
T  44035398 accaatcaaaaccccattggtttggttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttttattttgcggttt 44035299  T
Q  96 ggatgacttttatgctcaaaaccgaac 122  Q
    |||||||||||||||||||||||||||    
T  44035298 ggatgacttttatgctcaaaaccgaac 44035272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 25298270 - 25298386
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaacta 124  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||      
T  25298270 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccgaaccgaatgtttttttatctcgcagtttcgatgacttttatgctcaaaaccgaac-c 25298368  T
Q  125 aaaccgcaccgcgaacac 142  Q
    |||| |||||||||||||    
T  25298369 aaactgcaccgcgaacac 25298386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 17916872 - 17916991
Alignment:
Q  27 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||| ||||||||||||||||| ||||  ||    
T  17916872 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttatctcaaagtttggataacttttatgctcaaaactgaac-caa 17916970  T
Q  127 accgcaccgcgaacactccta 147  Q
    | |||||||||||||| ||||    
T  17916971 atcgcaccgcgaacaccccta 17916991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 17762828 - 17762684
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||||||||||| ||| |||||| ||||||| ||||    |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||    
T  17762828 ccaatccaaaccacatcggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatgtttttttatctcgcggttcggttga 17762729  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  ||||||||| ||| |||||| |||||||||||| ||||    
T  17762728 cttttagcctcaaaaccaaac-aaaaccacaccgcgaacaccccta 17762684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 18356970 - 18356852
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||| |||||||||||||||| || | |||||| ||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  18356970 ttggtttggtttgaatgactttttaaaaattaatcaaaccaatccataccgcatgcttctttatctcgcagtttagatgacttttatgctcaaaaccgaa 18356871  T
Q  122 ctaaaaccgcaccgcgaaca 141  Q
    |  ||| |||||||||||||    
T  18356870 c-caaatcgcaccgcgaaca 18356852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 41461167 - 41461017
Alignment:
Q  3 caatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgac 102  Q
    |||||||||||||||||||||||||||||| | ||    |||||||| ||||||||||||||||||||||||| |||||||| || |||||| || ||||    
T  41461167 caatccaaaccgcattggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttagcttgcggttcggttgac 41461068  T
Q  103 ttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtcaaaa 154  Q
    |||||  || ||||||||||  |||| ||||||||||||| |||| ||||||    
T  41461067 ttttagtctaaaaaccgaac-caaactgcaccgcgaacacccctaatcaaaa 41461017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 27301485 - 27301624
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    ||||||||||||||||||||||||||   ||    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||  ||||| |||||    
T  27301485 ccaaaccgcattggtttggtttggttcaaattttattttaaaagtcaaccgaatcaaaccaaaccgcatgcttttttatcttgcggtccggatggctttt 27301584  T
Q  107 atgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |  |||||||||||||  |||| ||| ||||||||| ||||    
T  27301585 aatctcaaaaccgaac-caaactgcagcgcgaacaccccta 27301624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 15320598 - 15320720
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaacta 124  Q
    |||||||||||||    |||||||||||||| |||||||||| ||| |||||||||||||  || ||||||||||||||||||  ||||||| |||||      
T  15320598 gtttggtttggattttattttaaaaatcaactgaaccaaacctaactgcatgcttttttacttcacggtttggatgacttttagcctcaaaatcgaac-c 15320696  T
Q  125 aaaccgcaccgcgaacactcctag 148  Q
    |||||||||||||||||| |||||    
T  15320697 aaaccgcaccgcgaacacccctag 15320720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 28790587 - 28790453
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    ||||||| |||||||||||||||||||||||    |||||||| ||||||||| | || |||||||||||||||||||||| ||||||  ||||||||||    
T  28790587 ccaaaccacattggtttggtttggtttggattttattttaaaagtcaaccgaatctaatcaaaccgcatgcttttttatcttgcggttcagatgactttt 28790488  T
Q  107 atgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    |   ||||||| ||||  |||||||||| |||||||    
T  28790487 aacatcaaaactgaac-caaaccgcaccacgaacac 28790453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 5862623 - 5862771
Alignment:
Q  3 caatccaaaccgcattggtttggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttgg 97  Q
    |||||||||||| ||||||||| |||||||||| |  || |||   |||||| ||||||||||||||||||||||||| ||||||||| | ||| ||| |    
T  5862623 caatccaaaccgtattggtttgatttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttattttgcgatttag 5862722  T
Q  98 atgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||  ||||||| | || | |||||||||||||||||| ||||    
T  5862723 atgacttttaccctcaaaatc-aaatcaaaccgcaccgcgaacaccccta 5862771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 12041625 - 12041729
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||  |||||  |||||||||||  |||||||||||||  ||||| |||||| ||||    
T  12041625 ttttaaaagtcaaccgaaccaaatcaaaccgcatgtttttttatcttacggttcagatgacttttagcctcaaaaccgaac-caaaccacaccgcaaaca 12041723  T
Q  142 ctccta 147  Q
    | ||||    
T  12041724 ccccta 12041729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 13193985 - 13193900
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatct 87  Q
    |||| |||||| ||||||||||| ||||||| ||||    |||||||| |||||||||||||||||||| | ||||||||||||||    
T  13193985 ccaacccaaactgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaacagtatgcttttttatct 13193900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 30761757 - 30761876
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    ||||| |||||||||||||||||||||| ||    |||||||| |||||  || |||| ||||||||||| |||||||||| | | ||  ||||||||||    
T  30761757 ccaaatcgcattggtttggtttggtttgaattttattttaaaagtcaacataatcaaaacaaaccgcatgtttttttatcttgtgattcagatgactttt 30761856  T
Q  107 atgctcaaaaccgaactaaa 126  Q
    |  ||||||| |||||||||    
T  30761857 aacctcaaaatcgaactaaa 30761876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 34910392 - 34910277
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgc----ttttttatctcgcggtttggat 99  Q
    ||||||| ||||||||||||||||||  |  |||||||||||||||||||||      ||||||||||||||      ||||||||||||||||||| ||    
T  34910392 aatccaagccgcattggtttggtttgaat--gatgactttttaaaaatcaaca-----aaaccaaaccgcatatgtttttttttatctcgcggtttgaat 34910300  T
Q  100 gacttttatgctcaaaaccgaac 122  Q
    || ||||||||||||||| ||||    
T  34910299 gatttttatgctcaaaactgaac 34910277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 1331076 - 1330952
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||    |||||||| |||||||||||||||||| | ||||||||||||| || | |||| |||||| ||||   || |||||||||    
T  1331076 ttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaatctgcatgcttttttaccttgtggttcggatgatttttcgtcttaaaaccgaa 1330977  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
     | |||||||| ||| ||||| ||||    
T  1330976 -tcaaaccgcatcgcaaacaccccta 1330952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 4657812 - 4657699
Alignment:
Q  8 caaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||||||||||||||||| |||| |    ||||||||||||||||||  |||||||||  |||| |||||||||| |||| |  |||| ||||||    
T  4657812 caaaccgcattggtttggtttgggttggtttttattttaaaaatcaaccgaattaaaccaaactacatgtttttttatcttgcggctcagatgtctttta 4657713  T
Q  108 tgctcaaaaccgaa 121  Q
      || |||||||||    
T  4657712 accttaaaaccgaa 4657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 44085536 - 44085455
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctt-ttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |  |||||||| ||||    
T  44085536 tttttaaagtcaaccgaaccaaaccaaaccgcatgctttttttatcttgcggttcagatgactttaaccctcaaaactgaac 44085455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24725793 - 24725875
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 83  Q
    |||||||||| ||||||||||| |||||||||   ||||||||| |||| |  ||| ||||||||| ||||||||| ||||||    
T  24725793 accaatccaagccgcattggttgggtttggttcatatgacttttgaaaattttacccaaccaaaccgaaccgcatgttttttt 24725875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 44986067 - 44986120
Alignment:
Q  16 attggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaa 69  Q
    ||||||||| |||  ||||||||||||||||||| |||| ||||||||||||||    
T  44986067 attggtttgatttaatttggatgactttttaaaagtcaatcgaaccaaaccaaa 44986120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 141
Target Start/End: Complemental strand, 12884561 - 12884479
Alignment:
Q  58 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||||||||||||| |||||||| |  || ||||||||||||||||  || |||| |||||  |||||||||||| ||||    
T  12884561 aaccaaaccaaaccgcatacttttttaccatgcagtttggatgacttttaaccttaaaatcgaac-caaaccgcaccgcaaaca 12884479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 20985897 - 20985932
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggat 37  Q
    ||||||||||||||||| ||||||||||||||||||    
T  20985897 ccaatccaaaccgcattagtttggtttggtttggat 20985932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 36075446 - 36075371
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaac 117  Q
    |||||||| | ||| ||| ||||||||||| ||||||||||||||  |||||| |||| |||||||  ||||||||    
T  36075446 ttttaaaagtgaactgaatcaaaccaaaccacatgcttttttatcctgcggttcggataacttttaacctcaaaac 36075371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 12841576 - 12841488
Alignment:
Q  58 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||||||||||||||| |||||||||  || ||   |||| |||||  ||||||||||||| ||||| ||||||| ||||| ||||    
T  12841576 aaccaaaccaaaccgcatgcatttttatcttacgattcatatgatttttaatctcaaaaccgaac-aaaactgcaccgcaaacaccccta 12841488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 10661220 - 10661096
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661220 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 10661121  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  |||||||||||||||||| ||||    
T  10661120 c-caaaccgcaccgcgaacaccccta 10661096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 33068350 - 33068206
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgact 103  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  33068350 aatccaacctgcattggtttgatttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatgcttttttatcttgcggtttggatgact 33068251  T
Q  104 tttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||||||||||||||||||  |||||||||| ||||||| ||||||    
T  33068250 tttatgctcaaaaccgaac-caaaccgcaccacgaacacccctagt 33068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 36910347 - 36910473
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||    
T  36910347 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcgcggttttgatgacttttatgctcaaaatcaaa 36910446  T
Q  122 ctaaaaccgcaccgcgaacactcctagt 149  Q
    |  |||||||||||||||||| ||||||    
T  36910447 c-caaaccgcaccgcgaacacccctagt 36910473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3006562 - 3006707
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3006562 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 3006661  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    |||||| | |||||||  |||||||||  ||||||||||||||||||    
T  3006662 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacac 3006707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14549316 - 14549171
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||    
T  14549316 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaatcaaaccaaaccgcatatttttttatctcacggttt 14549217  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||    
T  14549216 ggatgacttttatgctcaaaaccgaa-tcaaaccacaccgcgaacac 14549171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5803236 - 5803388
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5803236 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 5803335  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||||| | |||||||  ||| |||||  ||||||||| |||||||| ||||||    
T  5803336 ggatgattattatgcttgaaatcgaac-caaaccgcactgcgaacacccctagt 5803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 44672871 - 44672755
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  44672871 accaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaatcgaaccaaaccaaaccgcatgtttttttatctcgcgatttggatg 44672777  T
Q  101 acttttatgctcaaaaccgaac 122  Q
    ||||||||||||||||||||||    
T  44672776 acttttatgctcaaaaccgaac 44672755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18170020 - 18170160
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||     |||||||||||| |||||||||||||||||||| ||||    
T  18170020 accaatccaaaccgcattggtttggtttggttttgatgactttttaaaactcaaccg-----aaccaaaccgcacgcttttttatctcgcggtttagatg 18170114  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||| ||||||||||||  |||||||||| | ||||| ||||    
T  18170115 acttttatgttcaaaaccgaac-caaaccgcacctcaaacaccccta 18170160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6200842 - 6200969
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttg------gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    ||||||||||||||||||| ||||||||||||||      |||||||||||||||||||||  |||||||| |||||||||| ||||||||||||| |||    
T  6200842 accaatccaaaccgcattgctttggtttggtttgattttggatgactttttaaaaatcaacttaaccaaactaaaccgcatgtttttttatctcgcagtt 6200941  T
Q  95 tggatgacttttatgctcaaaaccgaac 122  Q
    ||||| ||||||||||||||||||||||    
T  6200942 tggattacttttatgctcaaaaccgaac 6200969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18633587 - 18633728
Alignment:
Q  1 accaatccaaaccgcattggttt-ggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggat 99  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||     |||||||| |||||||||||||||||||| |||    
T  18633587 accaatccaaaccgcattggttttggtttggttttgatgactttttaaaactcaaccgaacc-----aaaccgcacgcttttttatctcgcggtttagat 18633681  T
Q  100 gacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||||| ||||||||||||  |||||||||| | ||||| ||||    
T  18633682 gacttttatgttcaaaaccgaac-caaaccgcacctcaaacaccccta 18633728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 44336844 - 44336714
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg-cttttttatctcgcggtttggatgacttttatgctcaaa 115  Q
    |||||||||||||||| ||||    |||||||| ||||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||  ||||||    
T  44336844 ttggtttggtttggttcggattgtattttaaaagtcaaccgaaccaaaccaaaccgcatgttttttttatcttgcggttcggatgacttttaaactcaaa 44336745  T
Q  116 accgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||  |||||||||||||||||||||||    
T  44336744 accgaac-caaaccgcaccgcgaacactccta 44336714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 30392169 - 30392105
Alignment:
Q  58 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30392169 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 30392105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 3681994 - 3681900
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||| |||||||||||||||||||| ||     ||||||||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||    
T  3681994 ttggtttagtttggatgactttttaaaagtc-----aaccaaaccaaaccgcatg-ttttttatctcgcggtttggataacttttatattcaaaaccgaa 3681901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45366395 - 45366277
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||| |||||||||||||||| || || |  | ||||||||  ||||||||||||| ||||||| |||||||||||||| ||||||   |||    
T  45366395 accaatccaaactgcattggtttggtttgattcggttttcattttaaaaggcaaccgaaccaaatcaaaccgtatgcttttttatcttgcggttcatatg 45366296  T
Q  101 acttttatgctcaaaaccg 119  Q
    |||||||  ||||||||||    
T  45366295 acttttaacctcaaaaccg 45366277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 4785327 - 4785202
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    ||||| ||||||||||||||||||||||||||||     || |  |||||||| |||||||||||||| |||||||||| |||||||||   |||||| |    
T  4785327 ccaattcaaaccgcattggtttggtttggtttggttcatattatattttaaaagtcaaccgaaccaaatcaaaccgcatacttttttattctgcggttcg 4785228  T
Q  97 gatgacttttatgctcaaaaccgaac 122  Q
     ||||||||||  |||||||||||||    
T  4785227 tatgacttttaatctcaaaaccgaac 4785202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 40436523 - 40436378
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg-cttttttatctcgcggtttggatg 100  Q
    |||| ||||||||||||||||||||| ||||   ||    |||| ||| |||||||||||||||||||| |||||  |||||||||| ||  |||||||     
T  40436523 ccaacccaaaccgcattggtttggttcggttcaaattttatttttaaagtcaaccgaaccaaaccaaacggcatgttttttttatcttgcaatttggatc 40436424  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||  |||||||||||||  |||||||||||||||||| ||||    
T  40436423 acttttaccctcaaaaccgaac-caaaccgcaccgcgaacaccccta 40436378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 7428469 - 7428549
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||  ||||||  |||||||||||  |||| ||||||||    
T  7428469 ttttaaaagtcaaccgaaccaaaccaaaccgcatgcatttttatcatgcggttcagatgacttttaacctcataaccgaac 7428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 11219039 - 11218892
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttgga 98  Q
    ||||||||| |||||||||||||||| ||||  |  ||||||   |||||| |||||| |||||||||||| ||||| ||| ||||||| ||| || |||    
T  11219039 aatccaaactgcattggtttggtttgatttgattcagactttattttaaaagtcaaccaaaccaaaccaaatcgcatacttatttatcttgcgtttcgga 11218940  T
Q  99 tgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||||||  ||||||| |||||  |||||||||| ||||||| ||||    
T  11218939 tgacttttagcctcaaaatcgaac-caaaccgcaccccgaacaccccta 11218892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 12883777 - 12883870
Alignment:
Q  53 aaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||||||||||||||| ||| ||||| | | |||| | ||||||||||  |||||||||||||  |||||||||||||||||| ||||    
T  12883777 aaccgaaccaaaccaaaccgcatacttatttattttgtggttcgaatgacttttaacctcaaaaccgaac-caaaccgcaccgcgaacaccccta 12883870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 24682084 - 24682206
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggat-gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggat 99  Q
    ||||||||| ||||| |||||||||||||||| | || |||   |||||| |||| |||| |||||||||| |||| ||| ||||||| |||||| ||||    
T  24682084 aatccaaactgcattagtttggtttggtttggttcgattttattttaaaagtcaatcgaatcaaaccaaactgcatacttatttatcttgcggttcggat 24682183  T
Q  100 gacttttatgctcaaaaccgaac 122  Q
    || |||||  |||||||||||||    
T  24682184 gaattttagcctcaaaaccgaac 24682206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 8036079 - 8036024
Alignment:
Q  52 caaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||    
T  8036079 caaccgaaccaaaccaaactgcatgcttttttatcttgcggttcagatgactttta 8036024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 15272317 - 15272438
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| ||||     || |||| |||||  |||||||||||||||| ||||||||||||  || ||| ||||||||||||  |||||||    
T  15272317 ttggtttggtttggttcggattgtgcttgaaaagtcaactaaaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaatctcaaaa 15272416  T
Q  117 ccgaactaaaaccgcaccgcgaa 139  Q
    ||| ||  |||||||||||||||    
T  15272417 ccgtac-caaaccgcaccgcgaa 15272438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 15452686 - 15452807
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| ||||     || |||| |||||  |||||||||||||||| ||||||||||||  || ||| ||||||||||||  |||||||    
T  15452686 ttggtttggtttggttcggattgtgcttgaaaagtcaactaaaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaatctcaaaa 15452785  T
Q  117 ccgaactaaaaccgcaccgcgaa 139  Q
    ||| ||  |||||||||||||||    
T  15452786 ccgtac-caaaccgcaccgcgaa 15452807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 31497656 - 31497710
Alignment:
Q  53 aaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  31497656 aaccaaaccaaaccaaaccgcgtgcttttttatcttgcggttcggatgactttta 31497710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 38926473 - 38926526
Alignment:
Q  63 aaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||| ||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  38926473 aaccgaaccgcatgtttttttatttcgcggttaggatgacttttatgctcaaaa 38926526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 22811209 - 22811308
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||||||||||||||||||| |||| | | ||||||| || |||  |||||||||||  ||||||| | |||  |||||||||||||||||    
T  22811209 ttttaaaagtcaaccgaaccaaaccaaacagcatacatatttatcttgcagttcagatgacttttagcctcaaaatcaaac-caaaccgcaccgcgaaca 22811307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 33566048 - 33565925
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggat-gactttt----taaaaatcaaccgaaccaaaccaaaccgcatgc--ttttttatctcgcggtt 94  Q
    |||||| |||||||| |||||||||||||||||| | || ||||    || || ||||||||||||||||||||||||| |  |||||||||| ||||||    
T  33566048 ccaatcaaaaccgcactggtttggtttggtttggttcgaattttattttagaagtcaaccgaaccaaaccaaaccgcatacttttttttatcttgcggtt 33565949  T
Q  95 tggatgacttttatgctcaaaacc 118  Q
       ||||||||||  |||||||||    
T  33565948 caaatgacttttagcctcaaaacc 33565925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 31497610 - 31497664
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 71  Q
    ||||||||||||||||||||||   |||| ||| |||||||||||||||||||||    
T  31497610 ttggtttggtttggtttggatgttatttttaaagtcaaccgaaccaaaccaaacc 31497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 9012833 - 9012972
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||| |||||||||||||||||||||||||| ||||    |||||||| ||     || ||||||||||||||  | ||||||||| |||||| || |||    
T  9012833 ccaacccaaaccgcattggtttggtttggttcggattgtattttaaaagtc-----aatcaaaccaaaccgcacacatttttatcttgcggttcgggtga 9012927  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  ||||||| |||||  || || |||||||||||| ||||    
T  9012928 cttttagcctcaaaatcgaac-caacccacaccgcgaacaccccta 9012972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 35688407 - 35688484
Alignment:
Q  8 caaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttat 85  Q
    |||||| |||||||||||||||||| || |  | |||||||| |||| ||||||||| ||||| ||||| ||||||||    
T  35688407 caaaccacattggtttggtttggttgggttttcattttaaaagtcaatcgaaccaaatcaaactgcatgattttttat 35688484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 36340771 - 36340836
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 82  Q
    |||||||||||||||| ||||    |||||||| |||||||||||||| |||||||||| ||||||    
T  36340771 ttggtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 36340836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 28073207 - 28073292
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||||| || |  | |||||||| ||||| ||||||||| ||||| |||| |||||||| | ||||||  |||||||||||    
T  28073207 ttggtttggttcggttttcattttaaaagtcaactgaaccaaactaaaccacatgtttttttatattgcggttcagatgactttta 28073292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 69551 - 69681
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  69551 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaa 69650  T
Q  117 ccgaactaaaaccgcaccgcgaacactcctag 148  Q
     |||||  |||||||||||||||||| |||||    
T  69651 tcgaac-caaaccgcaccgcgaacacccctag 69681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 35402200 - 35402345
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  35402200 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcgatttggatg 35402299  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||||||  |||||||||  |||||||||||||||||| ||||    
T  35402300 attattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 35402345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 6004403 - 6004539
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6004403 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctgaaaaccgaa 6004502  T
Q  122 ctaaaaccgcaccgcgaacactcctagtcaaaattcat 159  Q
    |  |||||||| ||| ||||| |||||| |||| ||||    
T  6004503 c-caaaccgcatcgcaaacacccctagttaaaaatcat 6004539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4669637 - 4669787
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4669637 accaatccaaaccgcattggtttggtttggtttggttcggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 4669736  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||| ||||||||||    
T  4669737 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcaaacactccta 4669787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 32880367 - 32880243
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  32880367 ttggtttggtttgtatgactttttaaaaatcaaccgaaccaaatcaaaccacatgcttttttatctcgcggtttggaggacttttatgctcaaagccgaa 32880268  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  |||||||||||| ||||||||||    
T  32880267 c-caaaccgcaccgcaaacactccta 32880243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34794677 - 34794536
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34794677 accaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttctctcgcggtttggatg 34794583  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    | | |||||||  |||||||||  |||||||||||||||||| |||||    
T  34794582 attattatgcttgaaaccgaac-caaaccgcaccgcgaacacccctag 34794536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 51149657 - 51149797
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51149657 accaatccaaaccgcattgg-----tttggtttggatcactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatg 51149751  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | |||||||  |||||||||  |||||||||||||||||| ||||    
T  51149752 attattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 51149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 21586859 - 21586959
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21586859 ttggtttggtttggatgactttttaaaaatcaactgaatcaaaccaaactgcatgcttttttatctcgcggtttggatgacttttaagctcaaaaccgaa 21586958  T
Q  122 c 122  Q
    |    
T  21586959 c 21586959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10369304 - 10369152
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     ||||||||||||||||||| |||||| |||||||||||||| |||||| |||||| ||||    
T  10369304 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaacgaaccgaaccaaaccgcatgtttttttctctcgcagttt 10369205  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||||    
T  10369204 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacacccctagt 10369152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 43030488 - 43030359
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| || | |||||||||||||||||||    
T  43030488 ttggtttggtttagtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatacttttttatcttgcgattcgcatgacttttatgctcaaaa 43030389  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
     | || | |||||||||||||||||| ||||    
T  43030388 -ctaaatcaaaccgcaccgcgaacaccccta 43030359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 9827794 - 9827918
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||  |||||||| ||||||||||||||||||||| |||||||||    
T  9827794 ttggtttggtttggatgactttttaaaaatcaacctaaccaaatcaagtcgcatgcttaattatctcgtggtttggatgacttttatgcttaaaaccgaa 9827893  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  || ||||||||||||||| ||||    
T  9827894 c-caagccgcaccgcgaacaccccta 9827918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 50562586 - 50562712
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||||||| |||| ||||    
T  50562586 ttggtttgattgggatgaatttttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatctcgtagtttagatgacttttatgcttaaaatcgaa 50562685  T
Q  122 ctaaaaccgcaccgcgaacactcctagt 149  Q
    |  |||||||||||||| ||| ||||||    
T  50562686 c-caaaccgcaccgcgatcacccctagt 50562712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 55467638 - 55467784
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||||||||||||||||||||| ||||||| ||||    |||||||| ||||||||||||||||||||||||| ||| ||||||| || ||| ||||||    
T  55467638 ccaatccaaaccgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttgcagttcggatga 55467737  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    ||||||  |||||||||||||  |||||||||||| ||||| ||||||    
T  55467738 cttttagcctcaaaaccgaac-caaaccgcaccgcaaacacacctagt 55467784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33361046 - 33360968
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgca 74  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||    
T  33361046 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 33360968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48032849 - 48032931
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcg 89  Q
    ||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48032849 accaatccaaaccgcattgg-----tttggtttggatgaatttttaaaaatcaaccgaacc-aaccaaaccgcatgcttttttatctcg 48032931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 26758310 - 26758190
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggat--gact---ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||||||||||||||| |||||||||||||  ||||   |||||||| |||||||||||||||||||||| || ||| ||||||| |||||| ||||||    
T  26758310 ccaaaccgcattggtttagtttggtttggatcagactttattttaaaagtcaaccgaaccaaaccaaaccgtatacttatttatcttgcggttcggatga 26758211  T
Q  102 cttttatgctcaaaaccgaac 122  Q
    ||||||  || ||||||||||    
T  26758210 cttttaaccttaaaaccgaac 26758190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 39098010 - 39097912
Alignment:
Q  27 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcg----gtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||     ||||||||||||||||||||||||| |||||    
T  39098010 ttggtttggacgactttttaaaaatcaactgaaccaaatcaaaccgcatg-ttttttatctcgcatgcagtttggatgacttttatgctcaaaatcgaac 39097912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 54122092 - 54121968
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||| ||||    |||||||| ||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||  |||||||    
T  54122092 ttggtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttatcttacggttcggatgacttttaacctcaaaa 54121993  T
Q  117 ccgaactaaaaccgcaccgcgaacac 142  Q
     |||| | |||| ||||||| |||||    
T  54121992 tcgaa-tcaaactgcaccgcaaacac 54121968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 17144766 - 17144864
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||||||||||||||||| |||||| |||||| |||| |||||||||||||||||||  |||||||||||||  ||||||||| |||||||    
T  17144766 ttttaaaagtcaaccgaaccaaaccaatccgcatacttttt-atcttgcggtttggatgacttttagcctcaaaaccgaac-caaaccgcactgcgaaca 17144863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 35532193 - 35532252
Alignment:
Q  63 aaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  35532193 aaccaaaccgcatgcttttttatctcgcaatttggatgacttttatgctcaaaaccgaac 35532252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 51191792 - 51191699
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    ||||||||||||||||| |||||||||||||| || |  | ||||||||  ||||||||||||||||||||||||  |||||||||| ||||||    
T  51191792 accaatccaaaccgcatcggtttggtttggttcggttttcattttaaaatccaaccgaaccaaaccaaaccgcatatttttttatcttgcggtt 51191699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 42363217 - 42363360
Alignment:
Q  2 ccaatccaaaccgcattggtt----tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttgg 97  Q
    |||| ||||||||||||||||    |||||||||| ||||    |||| ||| |||||||||||||||||||||||||| |||||||||| ||||||       
T  42363217 ccaaaccaaaccgcattggttgatttggtttggttcggattttgtttttaaagtcaaccgaaccaaaccaaaccgcatgattttttatcttgcggttcaa 42363316  T
Q  98 atgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    || |||||||  |||||||||||||  ||||||||| ||||||||    
T  42363317 attacttttaccctcaaaaccgaac-caaaccgcactgcgaacac 42363360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 45915205 - 45915304
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||| |||||||||||||| |||||||||||||      |||||||| ||||||||||||||||||||||||| ||| || |||| |||||||| ||||    
T  45915205 ccaattcaaaccgcattggtctggtttggtttgg------ttttaaaagtcaaccgaaccaaaccaaaccgcatacttattcatcttgcggtttgaatga 45915298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 20846562 - 20846418
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtt----tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg--cttttttatctcgcggttt 95  Q
    |||| |||||||||||||||||| |||||||    |||||    |||||||| ||||||||||||||||||| ||||||   |||||||||| ||||||     
T  20846562 ccaacccaaaccgcattggtttgatttggttggtttggattttattttaaaagtcaaccgaaccaaaccaaagcgcatgtatttttttatcttgcggttc 20846463  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    ||||||||||||  ||| |||||||||  |||| ||||||||||||    
T  20846462 ggatgacttttactctcgaaaccgaac-caaactgcaccgcgaaca 20846418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 26291992 - 26292096
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    ||||||||||||||||||||||| |||||||||   |||||||||| ||||||||||||| |||||   | |||| |||||  |||||||||||||||||    
T  26291992 ttttaaaaatcaaccgaaccaaagcaaaccgcacaattttttatcttgcggtttggatgatttttaattttaaaatcgaac-caaaccgcaccgcgaaca 26292090  T
Q  142 ctccta 147  Q
    | ||||    
T  26292091 ccccta 26292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 2832446 - 2832533
Alignment:
Q  53 aaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||| |||||||||||||||||||||||||||||| | |||| ||||||||||||  ||||||||| |||  ||||| |||||||||||    
T  2832446 aaccaaaccaaaccaaaccgcatgcttttttatcttgtggttcggatgacttttagcctcaaaaccaaac-caaaccacaccgcgaaca 2832533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 22257535 - 22257615
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| ||||| |||| ||| |||||||||| ||| |||||||||||||| ||||||||||||  |||||||||||||    
T  22257535 ttttaaaagtcaactgaactaaatcaaaccgcatacttatttatctcgcggttcggatgacttttagtctcaaaaccgaac 22257615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 27054161 - 27054017
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||||||||| |||||||||||||||||||||| ||    |||||||| |||||| ||||||||||||  |||| ||| ||||||| ||  || | || |    
T  27054161 ccaatccaaatcgcattggtttggtttggtttgaattttattttaaaattcaaccaaaccaaaccaaaatgcatacttatttatcttgcaattcgaataa 27054062  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||||||||||| | |||| |||||||| |||| ||||    
T  27054061 cttttaacctcaaaaccgaaat-aaactgcaccgcgcacaccccta 27054017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 38652008 - 38652120
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaacta 124  Q
    |||||||||||||    |||| ||| |||||||||||||||||||||||||  |||||||||| ||| || ||||||||||||   |||||||| |||      
T  38652008 gtttggtttggatattatttttaaagtcaaccgaaccaaaccaaaccgcat-attttttatcttgcgattcggatgacttttaccttcaaaaccaaac-c 38652105  T
Q  125 aaaccgcaccgcgaa 139  Q
    |||||||||||||||    
T  38652106 aaaccgcaccgcgaa 38652120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 37044943 - 37044875
Alignment:
Q  66 caaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccg 135  Q
    ||||||||||| |||||||||| ||||||||||||||||||   |||||||||||||  |||||||||||    
T  37044943 caaaccgcatgtttttttatcttgcggtttggatgactttttctctcaaaaccgaac-caaaccgcaccg 37044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 45629277 - 45629160
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgact 103  Q
    ||||||||||| ||||||||| ||||||| |||     |||||||| |||||| || |||||||||  |||| ||| ||||||| |||||| ||||||||    
T  45629277 aatccaaaccgtattggtttgatttggttcggagtttattttaaaagtcaaccaaatcaaaccaaattgcatacttatttatcttgcggttcggatgact 45629178  T
Q  104 tttatgctcaaaaccgaa 121  Q
    ||||  || |||||||||    
T  45629177 tttaaccttaaaaccgaa 45629160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 10481681 - 10481761
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| |||||||||||||||||||| || ||  ||||||||| | ||||   ||||||||||| |||||||||||||    
T  10481681 ttttaaaagtcaaccgaaccaaaccaaactgcgtgtctttttatcttgtggttccaatgacttttatcctcaaaaccgaac 10481761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 8557954 - 8558070
Alignment:
Q  7 ccaaaccgcattggtttggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||||||||||||||||||||||||||| |  || |||   || ||| |||| | |||| |||||||||||| |||||||||||| || ||| || |||    
T  8557954 ccaaaccgcattggtttggtttggtttggttcggattttatttttaaagtcaatcaaaccgaaccaaaccgcaagcttttttatcttgcagttcgggtga 8558053  T
Q  102 cttttatgctcaaaacc 118  Q
    ||||||  |||||||||    
T  8558054 cttttaccctcaaaacc 8558070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 52632085 - 52631972
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcg-cggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaac 140  Q
    |||||||| | ||||||| ||||||||||||| || |||||||||| | | ||||||||||||||||  || |||| |||||  |||||| || || |||    
T  52632085 ttttaaaagttaaccgaatcaaaccaaaccgcgtgtttttttatcttgtctgtttggatgacttttagccttaaaaacgaac-caaaccgtacagcaaac 52631987  T
Q  141 actcctagtcaaaat 155  Q
    ||||||||| |||||    
T  52631986 actcctagttaaaat 52631972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 40483969 - 40483924
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatct 87  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||    
T  40483969 ttttaaaagtcaactgaaccaaaccaaaccgcatgcatttttatct 40483924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 44651035 - 44650912
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||| ||||||||||| ||||    |||| ||| |||||| ||||||||||||||||||| ||||||||    ||| | ||||||||||||  |||||||    
T  44651035 ttggattggtttggttcggattttatttttaaagtcaaccaaaccaaaccaaaccgcatgtttttttattctacggctcggatgacttttaccctcaaaa 44650936  T
Q  117 ccgaactaaaaccgcaccgcgaaca 141  Q
    | ||| | ||||| |||||||||||    
T  44650935 ctgaa-tcaaaccacaccgcgaaca 44650912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 20038472 - 20038441
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtt 32  Q
    ||||||||||||||||||||||||||||||||    
T  20038472 accaatccaaaccgcattggtttggtttggtt 20038441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 50578999 - 50579089
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggt 93  Q
    |||| ||||||| ||||||||||||||| || ||||    |||| ||| ||||||||| ||||||||| ||| ||||||||||||| |||||    
T  50578999 ccaacccaaaccacattggtttggtttg-ttcggattttatttttaaagtcaaccgaagcaaaccaaatcgcgtgcttttttatcttgcggt 50579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 4554757 - 4554705
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaa 69  Q
    ||||||||||||||||||||||    ||| ||| |||||||||||||||||||    
T  4554757 ttggtttggtttggtttggatgttacttttaaagtcaaccgaaccaaaccaaa 4554705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4669712 - 4669660
Alignment:
Q  19 ggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 71  Q
    |||||||||||||| || ||| |||| |||| ||| |||||||||||||||||    
T  4669712 ggtttggtttggttcggttgatttttaaaaagtcatccgaaccaaaccaaacc 4669660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 16529511 - 16529640
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  16529511 ttggtttggtttggtttgaatgactttttaaaaatcaaccgaaccaaaccaaacggcatgcttttttatctcgcagtttggatgacttttatgctcaaaa 16529610  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||||||||||||||||| ||||    
T  16529611 ccgaac-caaaccgcaccgcgaacaccccta 16529640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 29389120 - 29388986
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||    
T  29389120 accaatccaaaccgcattgatttggtttggtttggatgactttttaaaaatcaatcaaaccaaatcaaaccgcatgcttttttatctcacggtttggatg 29389021  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgc 136  Q
    |||||| ||||||||| |||||  ||||||||||||    
T  29389020 acttttttgctcaaaatcgaac-caaaccgcaccgc 29388986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39256631 - 39256776
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | |||    
T  39256631 accaatccaagccgtattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcgcagttcgaatg 39256730  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| |||||||||| ||||  |||||||||| ||||||| ||||    
T  39256731 acttttgtgctcaaaacagaac-caaaccgcaccacgaacaccccta 39256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 51252435 - 51252556
Alignment:
Q  26 tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaa 125  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |    
T  51252435 tttggtttggatgactttttaaaaatcaacccaaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaac-ca 51252533  T
Q  126 aaccgcaccgcgaacactcctag 148  Q
    ||||||||||||||||| |||||    
T  51252534 aaccgcaccgcgaacacccctag 51252556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8211371 - 8211219
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8211371 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 8211272  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||||| | |||||||  ||||| |||  |||||||||||||||||| ||||||    
T  8211271 ggatgattattatgcttgaaaccaaac-caaaccgcaccgcgaacacccctagt 8211219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 32954109 - 32953986
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  32954109 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctc-aggtttggatgacttttatgttcaaaa 32954011  T
Q  117 ccgaactaaaaccgcaccgcgaacac 142  Q
    ||||||  |||||||||| |||||||    
T  32954010 ccgaac-caaaccgcaccacgaacac 32953986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20493841 - 20493691
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    |||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  20493841 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcggttt 20493742  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  20493741 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 20493691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 45691885 - 45691750
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg-cttttttatctcgcggtttggat 99  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  45691885 accaatccaaaccgcattagtttggtttagtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgttttttttatttcgcggtttggat 45691786  T
Q  100 gacttttatgctcaaaaccgaactaaaaccgcaccgc 136  Q
    ||| ||| |||||||||| ||| | ||||||||||||    
T  45691785 gacatttttgctcaaaactgaa-tcaaaccgcaccgc 45691750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 5155354 - 5155483
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||  |||    
T  5155354 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttctctcgcggtttggatgattattatgcttgaaa 5155453  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    || |||  |||||||||||||||||| ||||    
T  5155454 ccaaac-caaaccgcaccgcgaacaccccta 5155483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 1161758 - 1161858
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1161758 ttggtttggtttggatgactttttaaaaatcaaccaaaccaaaccaaaccacatgcttttttatctcgcggttcggatgacttttctgctcaaaaccgaa 1161857  T
Q  122 c 122  Q
    |    
T  1161858 c 1161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 44918630 - 44918514
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||     |||||||||||||||||||| || |||||| ||    
T  44918630 accaatccaaaccgtattggtttggtttcgtttggatgactttttaaaaatcaaccgaacca-----aaccgcatgcttttttatcttgcagtttgggtg 44918536  T
Q  101 acttttatgctcaaaaccgaac 122  Q
    |||||||||||||||| |||||    
T  44918535 acttttatgctcaaaatcgaac 44918514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 11899074 - 11898952
Alignment:
Q  20 gtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccg 119  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||     |||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  11899074 gtttggtttggtttggatgattttttaaaaatcaaccgaaccaaacca-----catgtttttttatcgcgcggtttggatgacttttttgctcaaaaccg 11898980  T
Q  120 aactaaaaccgcaccgcgaacactcctag 148  Q
    || | ||||||||||||||||||| ||||    
T  11898979 aa-tcaaaccgcaccgcgaacacttctag 11898952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 33474530 - 33474414
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     |||||||||| ||||||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  33474530 accaatccaaaccgcattggtttggtttgg-----atgacttttttaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcacagtttggatg 33474436  T
Q  101 acttttatgctcaaaaccgaac 122  Q
    | |||| ||||||||| |||||    
T  33474435 atttttttgctcaaaatcgaac 33474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 33910771 - 33910923
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg------atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    ||||||| |||||||||||||||| ||||||||||      |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||  ||    
T  33910771 accaatcaaaaccgcattggtttgatttggtttggttttggatgaatttttaaaaatcaaccgaaccaaatcaaaccacatgcttttttatctcgcattt 33910870  T
Q  95 tggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    ||||||||||||||||||||| | ||||  ||||||||| ||||| || |||||    
T  33910871 tggatgacttttatgctcaaacctgaac-caaaccgcactgcgaatacccctag 33910923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 36203454 - 36203583
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||| |||| ||||    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  36203454 ttggtttggttcggttcggattgtattttaaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgcggtttggatgacttttaacctcaaaa 36203553  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  ||| |||||||||||||| ||||    
T  36203554 ccgaac-caaatcgcaccgcgaacaccccta 36203583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 42789628 - 42789745
Alignment:
Q  26 tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaa 125  Q
    |||||||||||||||||||||||||||||| |||||||||      ||||||||||||||||||||||||| |||||||||||||| |||| || ||  |    
T  42789628 tttggtttggatgactttttaaaaatcaactgaaccaaact-----gcatgcttttttatctcgcggtttgaatgacttttatgcttaaaatcgtac-ca 42789721  T
Q  126 aaccgcaccgcgaacactcctagt 149  Q
    ||||||||||||||||| ||||||    
T  42789722 aaccgcaccgcgaacacccctagt 42789745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 50471311 - 50471169
Alignment:
Q  4 aatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgact 103  Q
    |||| |||||||||||||||||||||||||||||    ||||||||  |||| ||||||||||||||||||| ||||||||| |  ||||| ||||||||    
T  50471311 aatctaaaccgcattggtttggtttggtttggattttattttaaaatgcaactgaaccaaaccaaaccgcatacttttttattttacggttcggatgact 50471212  T
Q  104 tttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||   |||||| ||||| ||| |||||| |||||||| ||||    
T  50471211 tttagcatcaaaatcgaac-aaacccgcactgcgaacaccccta 50471169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 32910371 - 32910485
Alignment:
Q  8 caaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||||| ||||| |||||||  |||    |||| ||| |||||||||||||||||||| ||||| |||||||||| || ||||||||||||||||    
T  32910371 caaaccgcatttgtttgttttggttcagattctatttttaaagtcaaccgaaccaaaccaaactgcatgtttttttatcttgcagtttggatgactttta 32910470  T
Q  108 tgctcaaaaccgaac 122  Q
    | |||||||||||||    
T  32910471 tcctcaaaaccgaac 32910485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 40095412 - 40095561
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggat-gactttt----taaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||||||||||| ||||||||||||||||||||| | || ||||    ||||||| ||||||| ||| |||||||||||  || ||||||| |||||| |    
T  40095412 ccaatccaaaccacattggtttggtttggtttggtttgagttttattttaaaaataaaccgaaacaagccaaaccgcatatttatttatcttgcggttcg 40095511  T
Q  97 gatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||| |||||||  |||||||||||||  |||||||||||||||||| ||||    
T  40095512 gataacttttaacctcaaaaccgaac-caaaccgcaccgcgaacaccccta 40095561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 27507527 - 27507626
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||||||||| ||||||||  |||| ||| ||||||| |||||| ||||||||||||| |||||||||||||  |||||||||||||||||    
T  27507527 ttttaaaagtcaaccgaactaaaccaaattgcatacttatttatcttgcggttcggatgacttttattctcaaaaccgaac-caaaccgcaccgcgaaca 27507625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 35980423 - 35980527
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||| ||||| |||||||||| |||||||||||| || |||||| ||||||||||||  |||||||||||||  |||||||||||| ||||    
T  35980423 ttttaaaagtcaatcgaacaaaaccaaaccacatgcttttttaccttgcggttcggatgacttttagcctcaaaaccgaac-caaaccgcaccgcaaaca 35980521  T
Q  142 ctccta 147  Q
    | ||||    
T  35980522 ccccta 35980527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 8165542 - 8165692
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgacttttta-----aaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||| |||||||||||| |||||||||||||||| | |  |||||     ||| ||||||||||| ||||||||||||||||| ||||||  |||||| |    
T  8165542 ccaacccaaaccgcatttgtttggtttggtttggttcagattttatttttaaagtcaaccgaaccgaaccaaaccgcatgcttctttatcctgcggttcg 8165641  T
Q  97 gatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctag 148  Q
    ||||| |||||   ||||||| ||||| |||||||||||| ||||| |||||    
T  8165642 gatgatttttaccttcaaaactgaact-aaaccgcaccgcaaacacccctag 8165692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 12973631 - 12973502
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||| || ||||    |||| |||||||||| ||||||||||||||||||  || ||||||| |||||| |||||||||| |   ||||||    
T  12973631 ttggtttggtttgattcggattttattttcaaaatcaaccaaaccaaaccaaaccgcatatttatttatcttgcggttcggatgactttcagcttcaaaa 12973532  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||||||||||||||||| ||||    
T  12973531 ccgaac-caaaccgcaccgcgaacaccccta 12973502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 18310086 - 18309951
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||| |||||||||||| |||||||||||||||  |    |||||||| |||||| |||||||||||| | |||| |||||||||  |||||| ||||||    
T  18310086 ccaaaccaaaccgcatttgtttggtttggtttgagttttattttaaaattcaaccaaaccaaaccaaatcacatgtttttttatcatgcggttcggatga 18309987  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaa 139  Q
    ||||||| || ||||| ||||   ||||||||||||||    
T  18309986 cttttatcctaaaaactgaac--caaccgcaccgcgaa 18309951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 9962143 - 9962283
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||| ||||||| |||||||||||||||||||| ||    ||| |||| |||||| || ||||| ||||||| || |||||||||| ||| || ||||||    
T  9962143 ccaacccaaaccacattggtttggtttggtttgaattttatttgaaaagtcaaccaaatcaaacaaaaccgcctgtttttttatcttgcgattcggatga 9962242  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacact 143  Q
    ||||||   ||||||| ||||  |||||||||||||||||||    
T  9962243 cttttagtttcaaaactgaac-caaaccgcaccgcgaacact 9962283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 25559991 - 25560136
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggat--gactt--tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttgg 97  Q
    ||||| |||||||||||||||| ||||||||||| |  || ||  ||||||| |||||||||||   ||||||||||| |||||||||||  ||||| |     
T  25559991 ccaattcaaaccgcattggttttgtttggtttggttcggatttattttaaaagtcaaccgaacc---ccaaaccgcatacttttttatcttacggttcga 25560087  T
Q  98 atgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||  ||||||| ||||| |||| |||||||||||||| ||||    
T  25560088 atgacttttaacctcaaaatcgaaccaaaa-cgcaccgcgaacaccccta 25560136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 26345049 - 26345190
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggat--gact---ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    ||||||||||||||||||||||||||| |||||| |  || |   |||||||| ||||||||| ||||| ||||||||| ||||||||| |   |||| |    
T  26345049 ccaatccaaaccgcattggtttggttttgtttggttcggattttattttaaaagtcaaccgaatcaaactaaaccgcatacttttttattttttggttcg 26345148  T
Q  97 gatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaa 139  Q
    |||||||| ||  |||||||| ||||| |||||||||||||||    
T  26345149 gatgacttctaacctcaaaacggaact-aaaccgcaccgcgaa 26345190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 21685553 - 21685682
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||  |||    |||||||| ||||| ||||||||||||||||||||| ||| ||||| ||||||  |||||||||||  || ||||    
T  21685553 ttggtttggtttggttctgattttattttaaaagtcaactgaaccaaaccaaaccgcatgcatttgtatcttgcggttcagatgacttttagccttaaaa 21685652  T
Q  117 ccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||  |||| ||||||| ||||| ||||    
T  21685653 ccgaac-caaactgcaccgcaaacaccccta 21685682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 6248112 - 6248019
Alignment:
Q  53 aaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||| |||||||||||||||||| ||| ||| ||| |||||||||||||||||||  ||||||| | || | ||||||||| |||||||| ||||    
T  6248112 aaccaaaccaaaccaaaccgcatacttatttttcttgcggtttggatgacttttagtctcaaaatc-aaatcaaaccgcactgcgaacaccccta 6248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 11074390 - 11074538
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgacttttta-----aaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||||||||||||||||| |||||||||||| || | |  |||||     ||| |||||||||||||||||||||| ||| ||||||||||   |||| |    
T  11074390 ccaatccaaaccgcattgatttggtttggttaggttcagattttatttttaaagtcaaccgaaccaaaccaaaccgtatgtttttttatcttaaggttcg 11074489  T
Q  97 gatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    || ||||||||  ||| ||| |||||  |||||||||||||||||| ||||    
T  11074490 gaagacttttaccctc-aaatcgaac-caaaccgcaccgcgaacaccccta 11074538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33769965 - 33769859
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||||  | |  | |||| |||  |||||||| ||||||||||||||| | ||||||||    |||| |||||    
T  33769965 accaatccaaaccgcattggtttggtttggttcagttttcattttgaaaggcaaccgaatcaaaccaaaccgcatacatttttatcatatggttcggatg 33769866  T
Q  101 actttta 107  Q
    |||||||    
T  33769865 actttta 33769859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 16537873 - 16537938
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||||||| | |||| ||||||| ||||||||||| |||||||||| ||||||| |||||||||||    
T  16537873 ttttaaaagtgaaccaaaccaaatcaaaccgcatgtttttttatcttgcggtttagatgactttta 16537938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 17651843 - 17651687
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggttt-----ggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttg 96  Q
    |||| ||||||||||||||||||||||||||      ||||    |||||||| |||||||||| ||| ||||||||||||||||||| ||  |  || |    
T  17651843 ccaaaccaaaccgcattggtttggtttggttcagttcggattttattttaaaagtcaaccgaacaaaatcaaaccgcatgcttttttaccttacaattcg 17651744  T
Q  97 gatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtcaaaa 154  Q
     ||||||||||  |||||||||||| | |||||||| ||| ||||| |||| ||||||    
T  17651743 aatgacttttagcctcaaaaccgaa-tcaaaccgcatcgcaaacacccctattcaaaa 17651687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 35980304 - 35980369
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||||||| |||||| ||| |||||||||| |||||||||||| || |||||| ||||||||||||    
T  35980304 ttttaaaagtcaaccaaacaaaaccaaaccacatgcttttttaccttgcggttcggatgactttta 35980369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 2490064 - 2490144
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| ||||| ||||||||||||| ||||| ||| ||||||| |||||| |||| |||||||  ||||||| |||||    
T  2490064 ttttaaaagtcaactgaaccaaaccaaatcgcatacttatttatcttgcggttcggataacttttagcctcaaaatcgaac 2490144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 8268703 - 8268604
Alignment:
Q  43 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttt-tttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    ||||||| |||||| ||||||||||| ||||||  ||| ||||||| ||||||  |||||||||||  |||||||||||||  ||||||||||||| |||    
T  8268703 tttaaaagtcaaccaaaccaaaccaacccgcatattttgtttatcttgcggttcagatgacttttagcctcaaaaccgaac-caaaccgcaccgcgtaca 8268605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 17989093 - 17988995
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| |||||||||||||| ||||||| |||  ||||||||| ||| ||  |||||||||||  |||||||||||||  ||||||||||| |||||    
T  17989093 ttttaaaagtcaaccgaaccaaatcaaaccgtatg-gtttttatcttgcgattcagatgacttttagcctcaaaaccgaac-caaaccgcaccgtgaaca 17988996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 34914180 - 34914116
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    |||||||| |||||| || |||||||||| |||| ||||||||| |||| |||||||||||||||    
T  34914180 ttttaaaagtcaaccaaagcaaaccaaactgcatacttttttatttcgcagtttggatgactttt 34914116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 24629978 - 24629901
Alignment:
Q  58 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgc 136  Q
    |||||||||||||| ||||||||||||||  ||| ||||| |||||||||  ||||||||| |||  ||||||||||||    
T  24629978 aaccaaaccaaaccacatgcttttttatcatgcgatttggctgacttttagtctcaaaacc-aacccaaaccgcaccgc 24629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24911049 - 24911134
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatc 86  Q
    |||||||||||| ||||||||||||||| |||||  |    |  ||||||||||||||| |||||||||||| ||| |||||||||    
T  24911049 accaatccaaactgcattggtttggtttagtttgatttggatgataaaaatcaaccgaaacaaaccaaaccgtatggttttttatc 24911134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 9330433 - 9330381
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtt 94  Q
    |||||||| |||||||||| |||||||||| ||| ||||||||||||| ||||    
T  9330433 ttttaaaagtcaaccgaactaaaccaaaccacatacttttttatctcgtggtt 9330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 52828868 - 52828789
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||||| |||||||| ||||||||||| ||||||||| |||||| ||||||  |||||| ||||  || ||||||||||    
T  52828868 ttttaaaagtcaaccga-ccaaaccaaacagcatgctttgttatcttgcggttcagatgacctttaaccttaaaaccgaac 52828789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 32954135 - 32954101
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttgg 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  32954135 accaatccaagccgcattggtttggtttggtttgg 32954101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 50153476 - 50153371
Alignment:
Q  21 tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccga 120  Q
    |||||||||||| ||||    |||||||| |||||||||| ||| |||||| |||  |||||||||| || |||  ||| |||||||  |||||||||||    
T  50153476 tttggtttggttcggattttattttaaaagtcaaccgaacaaaatcaaaccacatatttttttatcttgcagttcagataacttttaacctcaaaaccga 50153377  T
Q  121 actaaa 126  Q
    | ||||    
T  50153376 attaaa 50153371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 6694404 - 6694488
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    |||||||| |||||| || |||| |||||| ||| ||| |||| || |||||| ||||||  ||||  |||||||||||||||||    
T  6694404 ttttaaaagtcaacctaaacaaaacaaaccacatacttatttaacttgcggttcggatgatgtttagtctcaaaaccgaactaaa 6694488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 27350705 - 27350598
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaa--aaccgcaccgcgaa 139  Q
    |||||||| ||||  ||||||||||||||||||| ||| ||||| |  | | | |||||| |||||  || |||| ||||||||  ||||||||||||||    
T  27350705 ttttaaaagtcaattgaaccaaaccaaaccgcatacttatttattttacagatcggatgatttttagtcttaaaatcgaactaattaaccgcaccgcgaa 27350606  T
Q  140 cactccta 147  Q
    ||| ||||    
T  27350605 caccccta 27350598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 35992653 - 35992697
Alignment:
Q  63 aaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    |||||||||||||||||||||| || |||||| ||||||| ||||    
T  35992653 aaccaaaccgcatgcttttttaccttgcggttcggatgacattta 35992697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 47984552 - 47984616
Alignment:
Q  58 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    ||||||| ||||| ||||| |||||||||| ||  |||| ||||||||||  |||||||||||||    
T  47984552 aaccaaatcaaactgcatgtttttttatcttgcaatttgaatgacttttagtctcaaaaccgaac 47984616  T

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Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 35040231 - 35040351
Alignment:
Q  27 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  35040231 ttggtttggatgactttttaaaaatcaaccaaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac-caa 35040329  T
Q  127 accgcaccgcgaacactcctag 148  Q
    |||||||||||||||| |||||    
T  35040330 accgcaccgcgaacacccctag 35040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15859816 - 15859668
Alignment:
Q  1 accaatccaaaccgcattggtttggt---ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttgg 97  Q
    ||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  15859816 accaatccaaaccgcattggtttggtggtttggtttggatgactatttaaaaatcaaccgaatcaaaccaaaccgcatgctttttaatctcgcggtttgg 15859717  T
Q  98 atgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | |||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  15859716 aagacttttatgctcaaaaccgaac-caaacggcaccgcgaacaccccta 15859668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 10590917 - 10590793
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10590917 ttggtttggttgggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaa 10590818  T
Q  122 ctaaaaccgcaccgcgaacactccta 147  Q
    |  |||||||||||||| ||| ||||    
T  10590817 c-caaaccgcaccgcgaccaccccta 10590793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13810859 - 13811011
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  13810859 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgtatgcttttttatctcgcggttt 13810958  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    ||||||||||| ||||||||||| |||  ||||| |||||||||||| ||||||    
T  13810959 ggatgacttttttgctcaaaaccaaac-caaacctcaccgcgaacacccctagt 13811011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 5874142 - 5874292
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggttt 95  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5874142 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggttt 5874241  T
Q  96 ggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| | |||||||  |||||||||  |||||||||||||||||| ||||    
T  5874242 ggatgattattatgcttgaaaccgaac-caaaccgcaccgcgaacaccccta 5874292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 10494395 - 10494521
Alignment:
Q  20 gtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccg 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  10494395 gtttggtttagtttggatgactttttaaaaatcaaccgaaccaaatcaaaccccatgcttttttatctcgcggtttggatgacttttatgctcaaaacca 10494494  T
Q  120 aactaaaaccgcaccgcgaacactccta 147  Q
    |||  |||||||||||| ||||| ||||    
T  10494495 aac-caaaccgcaccgcaaacaccccta 10494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25136859 - 25136712
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||| || | ||||||||     
T  25136859 accaatctaaactgcattggtttggtttggtttggatgactttttaaaatccaaccgaaccaaaccgaaccgcatgcttttttatttcactgtttggatc 25136760  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    |||| |||||||||||||||||  ||||||||||| |||||| ||||||    
T  25136759 acttgtatgctcaaaaccgaac-caaaccgcaccgtgaacacccctagt 25136712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12270639 - 12270499
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12270639 accaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatg 12270545  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    | | ||||| |  |||||||||  |||||||||||||||||| ||||    
T  12270544 attattatgtttgaaaccgaac-caaaccgcaccgcgaacaccccta 12270499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 5287920 - 5288039
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||  |||||||||||||||    
T  5287920 ttggtttcgtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatgtttatttatctcgcagtttggatgacttaaatgctcaaaaccgaa 5288019  T
Q  122 ctaaaaccgcaccgcgaacac 142  Q
    |  ||||||||||||||||||    
T  5288020 c-caaaccgcaccgcgaacac 5288039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 33550391 - 33550287
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| | |||||||||||||||||||||||||||    
T  33550391 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaacatcatgtttttttatccctcggtttggatgacttttatgctcaaaa 33550292  T
Q  117 ccgaa 121  Q
    |||||    
T  33550291 ccgaa 33550287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 10391037 - 10391162
Alignment:
Q  22 ttggtttggtttggatgactttttaa-aaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccga 120  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  10391037 ttggtttggtttggatgacttttttagaaatcaagtgaaccaaaccaaacagcatgcttttttatctcgcggttcgaatgacttttatgctcaaaaccga 10391136  T
Q  121 actaaaaccgcaccgcgaacactccta 147  Q
    ||  ||||| |||||||||||| ||||    
T  10391137 ac-caaaccacaccgcgaacaccccta 10391162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13801972 - 13802066
Alignment:
Q  1 accaatccaaaccgcattgg-----tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgc 90  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  13801972 accaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgtatgcttttttatctcgc 13802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 6266967 - 6266846
Alignment:
Q  25 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaacta 124  Q
    ||||||||||| |  | |||||||| ||||||| |||||||||||||||||| |||||||| |  ||||| |||||||| |||  |||||||||| ||      
T  6266967 gtttggtttggttttcattttaaaagtcaaccgtaccaaaccaaaccgcatgtttttttattttacggttcggatgactattaacctcaaaaccgtac-c 6266869  T
Q  125 aaaccgcaccgcgaacactccta 147  Q
    |||||||||||||||||||||||    
T  6266868 aaaccgcaccgcgaacactccta 6266846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 892355 - 892485
Alignment:
Q  20 gtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccg 119  Q
    ||||||||| ||| |||||   |||||||| | |||||||||||||||||||||||| |||||||| | |||||| ||||||||||||  || ||||  |    
T  892355 gtttggtttagttcggatgttattttaaaagttaaccgaaccaaaccaaaccgcatgtttttttattttgcggttcggatgacttttagccttaaaattg 892454  T
Q  120 aactaaaaccgcaccgcgaacactcctagtca 151  Q
    |||  ||||||||||||||||||  |||||||    
T  892455 aac-caaaccgcaccgcgaacacctctagtca 892485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 30752576 - 30752513
Alignment:
Q  43 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttt 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  30752576 tttaaaagtcaaccgaaccaaaccaaaccgcatgcttttttatcttgcggttcagatgactttt 30752513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 22413884 - 22413778
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||||   |||| ||||||||||||  ||||||||| || | |||| ||||| ||||||    
T  22413884 ttttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttctggttcggatgacttttaacctcaaaacc-aaatcaaactgcacctcgaaca 22413786  T
Q  142 ctcctagt 149  Q
    | ||||||    
T  22413785 cccctagt 22413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 9686139 - 9686000
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    |||||||||||||||||||||||||| || ||  ||     ||||||| | ||||||||||||||||||||||| ||| ||||||| ||||||  |||||    
T  9686139 ccaatccaaaccgcattggtttggttcggattttat-----tttaaaagttaaccgaaccaaaccaaaccgcatacttatttatcttgcggttcagatga 9686045  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||| |  ||||||| |||||  |||| ||| ||||||||| ||||    
T  9686044 ctttgagcctcaaaatcgaac-caaactgcatcgcgaacaccccta 9686000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 24644969 - 24645068
Alignment:
Q  22 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    ||||||||||||||||    |||||||| ||||| ||| ||||||||||||||| ||| ||||||| |||||| ||||||||||||  ||||||| ||||    
T  24644969 ttggtttggtttggattttattttaaaagtcaac-gaatcaaaccaaaccgcatacttatttatcttgcggttcggatgacttttaacctcaaaatcgaa 24645067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 31945425 - 31945559
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||||||||||||||||| |||||||| ||| |||    |||||||| |||||||||||||| |     |||| |||||||||||  ||||| ||||||    
T  31945425 ccaatccaaaccgcattggattggtttgattttgattttattttaaaagtcaaccgaaccaaaac-----gcatacttttttatcttacggttcggatga 31945519  T
Q  102 cttttatgctcaaaaccgaactaaaaccgcaccgcgaacac 142  Q
    ||||||  ||||||||||||   ||||| ||||||||||||    
T  31945520 cttttaacctcaaaaccgaa-acaaaccacaccgcgaacac 31945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 29048173 - 29048075
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaaca 141  Q
    |||||||| ||||||||||||||||||| ||||  | |||||| ||   |||||||||||||||||  || ||||||||||  |||||||||||||||||    
T  29048173 ttttaaaagtcaaccgaaccaaaccaaatcgcacacctttttaccttatggtttggatgacttttaaccttaaaaccgaac-caaaccgcaccgcgaaca 29048075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 14940612 - 14940687
Alignment:
Q  46 aaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaa 121  Q
    |||| |||||||||||||||||||| ||||| |||||||||| |||||| |||| || ||||  || |||||||||    
T  14940612 aaaagtcaaccgaaccaaaccaaactgcatgtttttttatcttgcggttcggataacctttaaccttaaaaccgaa 14940687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 28632981 - 28632918
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttt 105  Q
    |||||||| ||||||||||||||| ||| |||||| ||||||||||  ||||||| ||||||||    
T  28632981 ttttaaaagtcaaccgaaccaaacaaaatcgcatgtttttttatcttacggtttgaatgacttt 28632918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 26645434 - 26645504
Alignment:
Q  56 cgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    ||||||||||||||||||||  ||||||| ||  ||||| ||||||||||||  ||||||||| |||||||    
T  26645434 cgaaccaaaccaaaccgcatatttttttaccttacggttcggatgacttttaacctcaaaaccaaactaaa 26645504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 26751400 - 26751470
Alignment:
Q  56 cgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaa 126  Q
    ||||||||||||||||||||  ||||||| ||  ||||| ||||||||||||  ||||||||| |||||||    
T  26751400 cgaaccaaaccaaaccgcatatttttttaccttacggttcggatgacttttaacctcaaaaccaaactaaa 26751470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 8135442 - 8135378
Alignment:
Q  82 ttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    |||||| |||||| ||||||||||||  ||||||||||||| |||| |||||||||||||| ||||    
T  8135442 ttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaaa-cgcaccgcgaacaccccta 8135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 19135148 - 19135248
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcat-gcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaac 140  Q
    |||||||| |||||||||||||||||||||||||   ||||||| ||  |||||  ||||||||||   |||||||||||||  ||||| ||||||||||    
T  19135148 ttttaaaagtcaaccgaaccaaaccaaaccgcatattttttttacctttcggttcagatgactttttgcctcaaaaccgaac-caaaccacaccgcgaac 19135246  T
Q  141 ac 142  Q
    ||    
T  19135247 ac 19135248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 8064542 - 8064456
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatg--cttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaa 127  Q
    |||||||| |||| | |||||||||||||| ||||   |||||||||| |||||| |||||| ||||| || ||||||||||||||||    
T  8064542 ttttaaaagtcaatcaaaccaaaccaaaccacatgtttttttttatcttgcggttcggatgattttta-gcccaaaaccgaactaaaa 8064456  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 20500592 - 20500507
Alignment:
Q  61 caaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
    ||||||||||  | ||||||||||||| |||||| |  |||||||||  ||||||||| |||  |||||||||||||||||| ||||    
T  20500592 caaaccaaactacttgcttttttatcttgcggttcgagtgacttttaccctcaaaaccaaac-caaaccgcaccgcgaacaccccta 20500507  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 32190681 - 32190786
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    |||||||||||| ||||||||    |||||||| | |||| || ||||||||||| |||| |||||||||   |||||  |||||||||||  |||||||    
T  32190681 ttggtttggtttagtttggattttattttaaaagttaaccaaatcaaaccaaacctcatgtttttttatcatacggttcagatgacttttagcctcaaaa 32190780  T
Q  117 ccgaac 122  Q
     |||||    
T  32190781 tcgaac 32190786  T

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Target: scaffold0029 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40570 - 40727
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccg----------aaccaaaccaaaccgcatgcttttttatctcgc 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||  |||||||||| |    
T  40570 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccaaaccaaaccgcatgagtttttatctcac 40669  T
Q  91 ggtttggatgacttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagt 149  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||    
T  40670 ggtttggatgactattatgctcaaaaccgaac-caaaccgcaccgcgaacacccctagt 40727  T

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Target: scaffold0013 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 106101 - 105971
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  106101 ttggtttggttcggtttggatgacattttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttttgctcaaaa 106002  T
Q  117 ccgaactaaaaccgcaccgcgaacactcctag 148  Q
     |||||  |||||||||||||||||| |||||    
T  106001 tcgaac-caaaccgcaccgcgaacacccctag 105971  T

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Target: scaffold0013; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 128708 - 128578
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaa 116  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  128708 ttggtttggttcggtttggatgactttttaaaaatcaacagaaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttatgctcaaaa 128609  T
Q  117 ccgaactaaaaccgcaccgcgaacactcctag 148  Q
     |||||  |||||||||||| ||||| |||||    
T  128608 tcgaac-caaaccgcaccgcaaacacccctag 128578  T

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Target: scaffold0308 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5883 - 6032
Alignment:
Q  1 accaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatg 100  Q
    ||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5883 accaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatg 5977  T
Q  101 acttttatgctcaaaaccgaactaaaaccgcaccgcgaacactcctagtcaaaatt 156  Q
    | | |||||||  ||| |||||  |||||||||||||||||| |||| || |||||    
T  5978 attattatgcttgaaatcgaac-caaaccgcaccgcgaacacccctaatctaaatt 6032  T

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Target: scaffold0204 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 25949 - 25830
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 101  Q
    ||||| |||||||||||| |||||||||||||||||    |||||||| |||||||||||||||||||| ||||| ||||||||||  ||||| ||||||    
T  25949 ccaattcaaaccgcattgatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatg-ttttttatcttacggttcggatga 25851  T
Q  102 cttttatgctcaaaaccgaac 122  Q
    ||||||  || ||||||||||    
T  25850 cttttaaccttaaaaccgaac 25830  T

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Target: scaffold0204; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 14603 - 14465
Alignment:
Q  8 caaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgactttta 107  Q
    ||||||||||| ||||||||||||| ||||     ||||| | ||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  14603 caaaccgcatttgtttggtttggttcggattgtgctttaagagtcaactgaaccaaaccaaatcgcatgcttttttatcttgcggttcggatgactttta 14504  T
Q  108 tgctcaaaaccgaactaaaaccgcaccgcgaacactccta 147  Q
       ||||||| ||||  |||||||||||| ||||||||||    
T  14503 acttcaaaactgaac-caaaccgcaccgcaaacactccta 14465  T

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Target: scaffold0688 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 1204 - 1125
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||| |||||||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||  |||||||||||||    
T  1204 ttttaagaatcaaccgaaccacaccaaaccacatg-ttttttatcttgcggttcggatgacttttagcctcaaaaccgaac 1125  T

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Target: scaffold0688; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 7773 - 7694
Alignment:
Q  42 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaac 122  Q
    |||||| |||||||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||  |||||||||||||    
T  7773 ttttaagaatcaaccgaaccacaccaaaccacatg-ttttttatcttgcggttcggatgacttttagcctcaaaaccgaac 7694  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 62471 - 62404
Alignment:
Q  17 ttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttta 84  Q
    |||||||||||||||| ||||    |||||||| |||||||||||||| |||||||||| ||||||||    
T  62471 ttggtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttta 62404  T

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Target: scaffold0664 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 6087 - 6054
Alignment:
Q  2 ccaatccaaaccgcattggtttggtttggtttgg 35  Q
    |||| |||||||||||||||||||||||||||||    
T  6087 ccaacccaaaccgcattggtttggtttggtttgg 6054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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