View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0775_low_55 (Length: 268)
Name: NF0775_low_55
Description: NF0775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0775_low_55 |
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Alignment Details
Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 44956129 - 44956294
Alignment:
| Q |
1 |
gcattggacctagtttgttatgtaagaccaaatccatatgaagtgcacaagtgtgtaaataagtgacatatccattgatagaagttagtgcagtttatcg |
100 |
Q |
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| T |
44956129 |
gcattggacctagtttgttatgtaagaccaaatccatatgaagtgcacaagtgtgtaaataagtgagatatccattgatagaagttagtgcagtttatcg |
44956228 |
T |
|
| Q |
101 |
ttttttaaattccatttcctaactgtttcacacttcctccatcaatttcaaaaatattgagaatgc |
166 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44956229 |
ttttttaaattccatttcctaactgtttcacacttcctccatcaatttcaaaaatattgagaatgc |
44956294 |
T |
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