View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0777_high_10 (Length: 409)

Name: NF0777_high_10
Description: NF0777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0777_high_10
NF0777_high_10
[»] chr8 (5 HSPs)
chr8 (30-228)||(8505402-8505599)
chr8 (312-399)||(8505683-8505770)
chr8 (345-381)||(6419789-6419825)
chr8 (345-381)||(18382508-18382544)
chr8 (354-400)||(31726415-31726461)
[»] chr4 (6 HSPs)
chr4 (345-385)||(44472157-44472197)
chr4 (345-381)||(5947077-5947113)
chr4 (345-381)||(34805059-34805095)
chr4 (347-381)||(27021532-27021566)
chr4 (345-381)||(36317480-36317516)
chr4 (345-381)||(36331689-36331725)
[»] chr3 (8 HSPs)
chr3 (354-400)||(45574880-45574926)
chr3 (345-381)||(4063667-4063703)
chr3 (345-381)||(22401183-22401219)
chr3 (345-381)||(28415344-28415380)
chr3 (345-381)||(37967941-37967977)
chr3 (346-381)||(3337238-3337273)
chr3 (346-381)||(47331319-47331354)
chr3 (345-378)||(33952819-33952852)
[»] scaffold0256 (1 HSPs)
scaffold0256 (345-381)||(5313-5349)
[»] scaffold0009 (1 HSPs)
scaffold0009 (345-381)||(195805-195841)
[»] chr7 (5 HSPs)
chr7 (345-381)||(6615795-6615831)
chr7 (345-381)||(34639645-34639681)
chr7 (345-381)||(34640706-34640742)
chr7 (345-381)||(42052518-42052554)
chr7 (353-381)||(21951074-21951102)
[»] chr6 (1 HSPs)
chr6 (345-381)||(18900049-18900085)
[»] chr5 (5 HSPs)
chr5 (345-381)||(1595622-1595658)
chr5 (345-381)||(16481388-16481424)
chr5 (345-381)||(16483711-16483747)
chr5 (345-381)||(39562192-39562228)
chr5 (345-381)||(40833445-40833481)
[»] chr2 (1 HSPs)
chr2 (345-381)||(40266585-40266621)
[»] chr1 (9 HSPs)
chr1 (345-381)||(2026225-2026261)
chr1 (345-381)||(18413428-18413464)
chr1 (345-381)||(28642698-28642734)
chr1 (345-381)||(32520902-32520938)
chr1 (345-381)||(45540241-45540277)
chr1 (346-381)||(49006951-49006986)
chr1 (348-381)||(24778647-24778680)
chr1 (348-381)||(43639885-43639918)
chr1 (345-381)||(8109464-8109500)


Alignment Details
Target: chr8 (Bit Score: 135; Significance: 3e-70; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 228
Target Start/End: Original strand, 8505402 - 8505599
Alignment:
Q  30 gtttatataggaacacatgattacatgaagacaaacacatgtcctatcttttccatgcctggatnnnnnnnnnntcatacataatcacgtgaataatatt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||          ||||||||||||||||| ||||||||    
T  8505402 gtttatataggaacacatgattacatgaagacaaacacatgtcctatcttttccatgcgtggataaaaaaaaaatcatacataatcacgtggataatatt 8505501  T
Q  130 ttatttcagacataatctatccatatatcgtaccaaccaatgcaattttg-gttttatccactttaaggcctgaaattcccctttcaaaaatagaaatga 228  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  8505502 ttatttcagacataatctatcc--atatcgtaccaaccaatgcaattttgtgttttatccaccttaaggcctgaaattctcctttcaaaaatagaaatga 8505599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 399
Target Start/End: Original strand, 8505683 - 8505770
Alignment:
Q  312 tgtatgcttattttggcgtggaggnnnnnnnnnccacaattcttttagtaaatacattttctaataaatgataatatttccgaccttt 399  Q
    |||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8505683 tgtatgcttattttggtgtggaggtttttttttccacaattcttttagtaaatacattttctaataaatgataatatttccgaccttt 8505770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 6419789 - 6419825
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  6419789 ccacaatccttttagtaaatacattttctaataaatg 6419825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 18382544 - 18382508
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  18382544 ccacaatccttttagtaaatacattttctaataaatg 18382508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 400
Target Start/End: Original strand, 31726415 - 31726461
Alignment:
Q  354 ttttagtaaatacattttctaataaatgataatatttccgacctttg 400  Q
    |||| ||||||||||||||||||||||| ||||||||  ||||||||    
T  31726415 tttttgtaaatacattttctaataaatggtaatatttatgacctttg 31726461  T

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Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 44472157 - 44472197
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatgataa 385  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  44472157 ccacaatccttttagtaaatacattttctaataaatgataa 44472197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 5947077 - 5947113
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  5947077 ccacaatccttttagtaaatacattttctaataaatg 5947113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 34805059 - 34805095
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34805059 ccacaatccttttagtaaatacattttctaataaatg 34805095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 27021566 - 27021532
Alignment:
Q  347 acaattcttttagtaaatacattttctaataaatg 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  27021566 acaatccttttagtaaatacattttctaataaatg 27021532  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 36317516 - 36317480
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  36317516 ccacaatcctttcagtaaatacattttctaataaatg 36317480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 36331725 - 36331689
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  36331725 ccacaatcctttcagtaaatacattttctaataaatg 36331689  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 45574926 - 45574880
Alignment:
Q  354 ttttagtaaatacattttctaataaatgataatatttccgacctttg 400  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||    
T  45574926 ttttagtaaatacattttctaataaatggtaatatttatgacctttg 45574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 4063703 - 4063667
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  4063703 ccacaatccttttagtaaatacattttctaataaatg 4063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 22401183 - 22401219
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  22401183 ccacaatccttttagtaaatacattttctaataaatg 22401219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 28415380 - 28415344
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28415380 ccacaatccttttagtaaatacattttctaataaatg 28415344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 37967941 - 37967977
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37967941 ccacaatccttttagtaaatacattttctaataaatg 37967977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 381
Target Start/End: Complemental strand, 3337273 - 3337238
Alignment:
Q  346 cacaattcttttagtaaatacattttctaataaatg 381  Q
    |||||| |||||||||||||||||||||||||||||    
T  3337273 cacaatccttttagtaaatacattttctaataaatg 3337238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 381
Target Start/End: Complemental strand, 47331354 - 47331319
Alignment:
Q  346 cacaattcttttagtaaatacattttctaataaatg 381  Q
    |||||| |||||||||||||||||||||||||||||    
T  47331354 cacaatccttttagtaaatacattttctaataaatg 47331319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 33952852 - 33952819
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataa 378  Q
    ||||||| ||||||||||||||||||||||||||    
T  33952852 ccacaatccttttagtaaatacattttctaataa 33952819  T

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Target: scaffold0256 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 5349 - 5313
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  5349 ccacaatccttttagtaaatacattttctaataaatg 5313  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 195841 - 195805
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  195841 ccacaatccttttagtaaatacattttctaataaatg 195805  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 6615795 - 6615831
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  6615795 ccacaatccttttagtaaatacattttctaataaatg 6615831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 34639681 - 34639645
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34639681 ccacaatccttttagtaaatacattttctaataaatg 34639645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 34640742 - 34640706
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34640742 ccacaatccttttagtaaatacattttctaataaatg 34640706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 42052518 - 42052554
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  42052518 ccacaatccttttagtaaatacattttctaataaatg 42052554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 381
Target Start/End: Complemental strand, 21951102 - 21951074
Alignment:
Q  353 cttttagtaaatacattttctaataaatg 381  Q
    |||||||||||||||||||||||||||||    
T  21951102 cttttagtaaatacattttctaataaatg 21951074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 18900085 - 18900049
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  18900085 ccacaatccttttagtaaatacattttctaataaatg 18900049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 1595658 - 1595622
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  1595658 ccacaatccttttagtaaatacattttctaataaatg 1595622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 16481388 - 16481424
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16481388 ccacaatccttttagtaaatacattttctaataaatg 16481424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 16483711 - 16483747
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16483711 ccacaatccttttagtaaatacattttctaataaatg 16483747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 39562228 - 39562192
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39562228 ccacaatccttttagtaaatacattttctaataaatg 39562192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 40833445 - 40833481
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40833445 ccacaatccttttagtaaatacattttctaataaatg 40833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 40266585 - 40266621
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40266585 ccacaatccttttagtaaatacattttctaataaatg 40266621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 2026225 - 2026261
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  2026225 ccacaatccttttagtaaatacattttctaataaatg 2026261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 18413428 - 18413464
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  18413428 ccacaatccttttagtaaatacattttctaataaatg 18413464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 28642734 - 28642698
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28642734 ccacaatccttttagtaaatacattttctaataaatg 28642698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 32520938 - 32520902
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  32520938 ccacaatccttttagtaaatacattttctaataaatg 32520902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 45540241 - 45540277
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  45540241 ccacaatccttttagtaaatacattttctaataaatg 45540277  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 381
Target Start/End: Original strand, 49006951 - 49006986
Alignment:
Q  346 cacaattcttttagtaaatacattttctaataaatg 381  Q
    |||||| |||||||||||||||||||||||||||||    
T  49006951 cacaatccttttagtaaatacattttctaataaatg 49006986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 381
Target Start/End: Original strand, 24778647 - 24778680
Alignment:
Q  348 caattcttttagtaaatacattttctaataaatg 381  Q
    |||| |||||||||||||||||||||||||||||    
T  24778647 caatccttttagtaaatacattttctaataaatg 24778680  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 381
Target Start/End: Complemental strand, 43639918 - 43639885
Alignment:
Q  348 caattcttttagtaaatacattttctaataaatg 381  Q
    |||| |||||||||||||||||||||||||||||    
T  43639918 caatccttttagtaaatacattttctaataaatg 43639885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 8109464 - 8109500
Alignment:
Q  345 ccacaattcttttagtaaatacattttctaataaatg 381  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8109464 ccacaatccttttagtgaatacattttctaataaatg 8109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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