View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0777_low_18 (Length: 368)
Name: NF0777_low_18
Description: NF0777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0777_low_18 |
 |  |
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[»] scaffold1024 (1 HSPs) |
 |  |  |
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[»] scaffold0167 (1 HSPs) |
 |  |  |
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[»] scaffold0320 (1 HSPs) |
 |  |  |
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[»] scaffold0431 (1 HSPs) |
 |  |  |
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[»] scaffold0040 (1 HSPs) |
 |  |  |
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[»] scaffold0039 (1 HSPs) |
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[»] scaffold0024 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 124 - 359
Target Start/End: Complemental strand, 19709507 - 19709272
Alignment:
Q |
124 |
acgacggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaagc |
223 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
19709507 |
acgacggtactttaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaagc |
19709408 |
T |
 |
Q |
224 |
taactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttccttcga |
323 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
19709407 |
taactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttccttcga |
19709308 |
T |
 |
Q |
324 |
gaacaactgcttggcttcgaccaatcttctctctgc |
359 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
19709307 |
caacaactgcttggcttcgaccaatcttctctctgc |
19709272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 19709739 - 19709667
Alignment:
Q |
52 |
caatctttttccagaaagtgcgtgaatgttcatcaataggtttctttatgaagaagacgaagttttgtacgaa |
124 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
19709739 |
caatcttttttcagaaagtgcgtgaatgttcatcaataggtttctttatgaagaagatgaagttttgtacgaa |
19709667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 351
Target Start/End: Complemental strand, 41652013 - 41651789
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaagctaa- |
226 |
Q |
|
|
|||||||| |||||||||||||||||| |||||| | ||| |||||| ||||||||||| |||||||||||| ||| ||| || |||||| ||| |
|
|
T |
41652013 |
ggtacttcgagtgctagaattctataaatgatttccgaccctgtttttcctatgaaaaactcttatttatacatagaaaag-taactgtaaaaagttaaa |
41651915 |
T |
 |
Q |
227 |
ctgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaa-ctgctgctttttgaattcaaattattttcc-ttcgag |
324 |
Q |
|
|
||||| ||| ||||||| ||||||||||||| || ||||| ||||||||| ||| ||||| ||||||||| | ||||| ||| |||||| ||||| |
|
|
T |
41651914 |
ctgccgcgaactgcacttcttccatcgaaaactgcttgtccaccacgtcttcaataagaaaaactgctgcttct-gaatttgaatgtttttcccttcgac |
41651816 |
T |
 |
Q |
325 |
aacaactgcttggcttcgaccaatctt |
351 |
Q |
|
|
||||||||||||||||||||||||||| |
|
|
T |
41651815 |
aacaactgcttggcttcgaccaatctt |
41651789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 22454719 - 22454636
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataa |
213 |
Q |
|
|
||||||| ||||||||||||||||||||||||||| ||| | |||||| ||||||||||||| || ||||||||| ||| |||| |
|
|
T |
22454719 |
ggtactttgagtgctagaattctataagtgatttgcgaccca-tttttcttatgaaaaactactatatatacataggaaaaataa |
22454636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 5892690 - 5892780
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaa |
220 |
Q |
|
|
|||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||| || |||||||||| || |||| |||||| |
|
|
T |
5892690 |
ggtacttcgagtgctagaattctataaatgatttgtgacc-cgtttttcatatgaaaaactactatatatacatagtgaaaataactgaaaa |
5892780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 5892852 - 5892910
Alignment:
Q |
297 |
ttttgaattcaaattattttccttcgagaacaactgcttggcttcgaccaatcttctct |
355 |
Q |
|
|
||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||| |
|
|
T |
5892852 |
ttttgaatttgaattattttcctttgacaacaactgcttggcttcgaccattcttctct |
5892910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 28291572 - 28291514
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaa |
187 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
T |
28291572 |
ggtacttcgagtgctagaattctataagtgatttgcgaccatttttttcgtatgaaaaa |
28291514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 15340914 - 15340695
Alignment:
Q |
138 |
agtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa-gct-aactgccacga |
235 |
Q |
|
|
|||||||||||||||||| |||||||| ||| | ||||||||||||||||||| |||||||| ||| | | |||| | ||||| || ||||| ||||| |
|
|
T |
15340914 |
agtgctagaattctataaatgatttgcgacc-aatttttcatatgaaaaactattatttatacctagaagaaataactaaaaaatactaaactgacacga |
15340816 |
T |
 |
Q |
236 |
tctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttcc-ttcgagaacaactgct |
334 |
Q |
|
|
||||||| | || | |||||| || |||| ||||||||| | | ||||| |||| ||||||||| |||| |||||| ||||| |||| ||||| |
|
|
T |
15340815 |
gctgcacttcctcgaccgaaaactgcatgtctcccacgtctccacaag--aaactactgc-ttttgaatttgaattcttttcctttcgacaacagctgct |
15340719 |
T |
 |
Q |
335 |
tggcttcgaccaatcttctctctg |
358 |
Q |
|
|
|||||||||||| ||||||||||| |
|
|
T |
15340718 |
tggcttcgaccattcttctctctg |
15340695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 15429979 - 15429760
Alignment:
Q |
138 |
agtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa-gct-aactgccacga |
235 |
Q |
|
|
|||||||||||||||||| |||||||| ||| | ||||||||||||||||||| |||||||| ||| | | |||| | ||||| || ||||| ||||| |
|
|
T |
15429979 |
agtgctagaattctataaatgatttgcgacc-aatttttcatatgaaaaactattatttatacctagaagaaataactaaaaaatactaaactgacacga |
15429881 |
T |
 |
Q |
236 |
tctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttcc-ttcgagaacaactgct |
334 |
Q |
|
|
||||||| | || | |||||| || |||| ||||||||| | | ||||| |||| ||||||||| |||| |||||| ||||| |||| ||||| |
|
|
T |
15429880 |
gctgcacttcctcgaccgaaaactgcatgtctcccacgtctccacaag--aaactactgc-ttttgaatttgaattcttttcctttcgacaacagctgct |
15429784 |
T |
 |
Q |
335 |
tggcttcgaccaatcttctctctg |
358 |
Q |
|
|
|||||||||||| ||||||||||| |
|
|
T |
15429783 |
tggcttcgaccattcttctctctg |
15429760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 15521283 - 15521064
Alignment:
Q |
138 |
agtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa-gct-aactgccacga |
235 |
Q |
|
|
|||||||||||||||||| |||||||| ||| | ||||||||||||||||||| |||||||| ||| | | |||| | ||||| || ||||| ||||| |
|
|
T |
15521283 |
agtgctagaattctataaatgatttgcgacc-aatttttcatatgaaaaactattatttatacctagaagaaataactaaaaaatactaaactgacacga |
15521185 |
T |
 |
Q |
236 |
tctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttcc-ttcgagaacaactgct |
334 |
Q |
|
|
||||||| | || | |||||| || |||| ||||||||| | | ||||| |||| ||||||||| |||| |||||| ||||| |||| ||||| |
|
|
T |
15521184 |
gctgcacttcctcgaccgaaaactgcatgtctcccacgtctccacaag--aaactactgc-ttttgaatttgaattcttttcctttcgacaacagctgct |
15521088 |
T |
 |
Q |
335 |
tggcttcgaccaatcttctctctg |
358 |
Q |
|
|
|||||||||||| ||||||||||| |
|
|
T |
15521087 |
tggcttcgaccattcttctctctg |
15521064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 32352277 - 32352350
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacata |
203 |
Q |
|
|
|||||||| ||||||| ||||||||||||||||||| ||| |||||| ||||||||||||| || |||||||| |
|
|
T |
32352277 |
ggtacttcgagtgctataattctataagtgatttgcgacc-cgtttttcttatgaaaaactactatatatacata |
32352350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 32368938 - 32369011
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacata |
203 |
Q |
|
|
|||||||| ||||||| ||||||||||||||||||| ||| |||||| ||||||||||||| || |||||||| |
|
|
T |
32368938 |
ggtacttcgagtgctataattctataagtgatttgcgacc-cgtttttcttatgaaaaactactatatatacata |
32369011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 22450033 - 22449988
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctatttt |
174 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||| |||| |||| |
|
|
T |
22450033 |
ggtacttcgagtgctagaattctataagtgatttgcgacctttttt |
22449988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 6017739 - 6017790
Alignment:
Q |
225 |
aactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtct |
276 |
Q |
|
|
||||||||||| ||||| | |||| |||||||| |||||||||||||||||| |
|
|
T |
6017739 |
aactgccacgagctgcatttcttcgatcgaaaactgtctgtcccccacgtct |
6017790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 4030139 - 4029966
Alignment:
Q |
183 |
aaaaactaccatttatacatagtaaatataaatgaaaaagctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatg |
282 |
Q |
|
|
||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||| |
|
|
T |
4030139 |
aaaaactactatttatacatagtaaaaatgactgaaaaagctaactgccacgatctgcactcctacaatcgaaaattgtctgtccaccacgtcttcaatg |
4030040 |
T |
 |
Q |
283 |
ggaaaactgctgc-tttttgaattcaaattattttccttcgagaacaactgcttggcttcgaccaatcttctct |
355 |
Q |
|
|
||||||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||||| |||||| |||| |
|
|
T |
4030039 |
ggaaaactgttgcttttttgaattcaaattcttttccttcgatagaaactgcttggcttcgatcaatctcctct |
4029966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 242044 - 241940
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagctaac |
227 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||| ||| |||| | |||||||||||| |
|
|
T |
242044 |
ggtacttcgagtgctagaattctataagtgatttgcgaccta-tttttcatatgaaaaactactatttatagatagcaaaaataactagaaaaagctaac |
241946 |
T |
 |
Q |
228 |
tgccac |
233 |
Q |
|
|
|||||| |
|
|
T |
241945 |
tgccac |
241940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 131 - 346
Target Start/End: Original strand, 28712471 - 28712685
Alignment:
Q |
131 |
tacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataa--atgaaaaagctaact |
228 |
Q |
|
|
|||||| ||||||||||||||||||||||||||| || | |||||| |||||||||||| |||||||||||| ||| |||| || ||||| |||| |
|
|
T |
28712471 |
tacttcgagtgctagaattctataagtgatttgcgacat-gtttttcttatgaaaaactatcatttatacata-aaaaaataactataaaaaactaaact |
28712568 |
T |
 |
Q |
229 |
gccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttccttcgagaaca |
328 |
Q |
|
|
||||||| | ||||| ||||||||||||| | ||||||||||||||| | | |||||| ||||| ||||||||| |||| ||| ||||||| ||| |
|
|
T |
28712569 |
gccacgaacggcacttcttccatcgaaaactacgtgtcccccacgtcttcagtaagaaaaccgctgc-ttttgaatttgaattctttcccttcgacgaca |
28712667 |
T |
 |
Q |
329 |
actgcttggcttcgacca |
346 |
Q |
|
|
||| |||||||||||||| |
|
|
T |
28712668 |
actacttggcttcgacca |
28712685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 13002847 - 13002734
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaagct-aa |
226 |
Q |
|
|
||||||||| |||||||||||||||||| |||||||| | | |||||| |||||||||||| ||||||||||||| || |||| || ||| || || |
|
|
T |
13002847 |
cggtacttcgagtgctagaattctataaatgatttgcta-ttcgtttttcctatgaaaaactattatttatacatagtgaaaataactgccaaaactaaa |
13002749 |
T |
 |
Q |
227 |
ctgccacgatctgca |
241 |
Q |
|
|
||||||||| ||||| |
|
|
T |
13002748 |
ctgccacgagctgca |
13002734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 347
Target Start/End: Original strand, 16793397 - 16793597
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa-gctaactgccacgatctgcactcct |
246 |
Q |
|
|
|||| |||||||||||| || |||||| |||||| |||||||| |||||||||||||||| | | |||||| ||||| |||| ||||| |||| | |
|
|
T |
16793397 |
ttctttaagtgatttgcgacttattttc-catatggaaaactactatttatacatagtaaacacgaccgaaaaaggctaattgccgcgatcaacacttcc |
16793495 |
T |
 |
Q |
247 |
tccatcgaaaattgtctgtcccccacgtcttt-aatgggaaaactgctgctttttgaattcaaattattttccttcgagaacaactgcttggcttcgacc |
345 |
Q |
|
|
||||||||||| | |||||||||||||||| | | | |||| | ||||||||||||||||| | || |||||| | |||| ||||||||||||| |
|
|
T |
16793496 |
tccatcgaaaaccgcttgtcccccacgtctttcactaaggaaaccgttgctttttgaattcaaactccttctcttcgatagtaactccttggcttcgacc |
16793595 |
T |
 |
Q |
346 |
aa |
347 |
Q |
|
|
|| |
|
|
T |
16793596 |
aa |
16793597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 16142637 - 16142731
Alignment:
Q |
128 |
cggtacttcaagtgct-agaatt-ctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaag |
222 |
Q |
|
|
||||||||| |||||| |||||| |||||| |||||||| ||| ||||| |||||| |||||||| |||||||||||||||| |||| |||||||| |
|
|
T |
16142637 |
cggtacttcgagtgcttagaatttctataaatgatttgcgacccattttc-catatggaaaactactatttatacatagtaaa-ataactgaaaaag |
16142731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 24154170 - 24154095
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
||||||||| ||||||||||||||| || |||||||| |||| |||||| ||| |||||||| |||||||||||| |
|
|
T |
24154170 |
cggtacttcgagtgctagaattctacaaatgatttgcgacct-gtttttcctataaaaaactattatttatacatag |
24154095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 242289 - 242216
Alignment:
Q |
52 |
caatctttttccagaaagtgcgtgaatgttcatca-----ataggtttctttatgaagaagacgaagttttgta |
120 |
Q |
|
|
|||| |||||||||||||||| ||||||||||||| ||||||| ||||||||| | || ||||||||||| |
|
|
T |
242289 |
caatatttttccagaaagtgcttgaatgttcatcatattcataggttactttatgaacatgaagaagttttgta |
242216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 106; Significance: 6e-53; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 124 - 340
Target Start/End: Original strand, 23455246 - 23455463
Alignment:
Q |
124 |
acgacggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaag |
222 |
Q |
|
|
|||| |||||||| ||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||||| || |||| || |||||| |
|
|
T |
23455246 |
acgatggtacttcgagtgctagaattctataagagatttgcaaccaatttttttatatgaaaaactattatttatacatagtgaaaataactgtaaaaag |
23455345 |
T |
 |
Q |
223 |
ctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttccttcg |
322 |
Q |
|
|
||||||||||||| ||||||| |||| | |||||| || ||||||||||||||| ||| |||||||| || ||||| |||||||||||||| |||||| |
|
|
T |
23455346 |
ctaactgccacgaactgcacttcttctaacgaaaactgcatgtcccccacgtcttcaataagaaaactgatgattttttaattcaaattatttcccttcg |
23455445 |
T |
 |
Q |
323 |
agaacaactgcttggctt |
340 |
Q |
|
|
| |||||||||||||||| |
|
|
T |
23455446 |
acaacaactgcttggctt |
23455463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 351
Target Start/End: Complemental strand, 33379357 - 33379136
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg--aaaaagct-a |
225 |
Q |
|
|
|||||||| ||| |||||||| |||||||||||||| | ||| ||||||||||||||||||| |||||| ||||| | | |||| || || ||||| | |
|
|
T |
33379357 |
ggtacttcgagtactagaattttataagtgatttgcga-ctaatttttcatatgaaaaactattatttatgcatagaagaaataactgtaaagaagctaa |
33379259 |
T |
 |
Q |
226 |
actgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattatttt-ccttcgag |
324 |
Q |
|
|
|||||||||| ||||||| ||| ||||||||| ||| |||| |||||||| | ||| ||||||| | | ||||||||| ||||||||| ||||||| |
|
|
T |
33379258 |
actgccacgagctgcacttctttcatcgaaaactgtatgtctcccacgtc-tcaat--aaaaactgatac-ttttgaatttgaattattttcccttcgac |
33379163 |
T |
 |
Q |
325 |
aacaactgcttggcttcgaccaatctt |
351 |
Q |
|
|
||||||||||||| ||||||||||||| |
|
|
T |
33379162 |
aacaactgcttggtttcgaccaatctt |
33379136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 24633314 - 24633241
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacata |
203 |
Q |
|
|
|||||||||||||||||||| | |||||||||||| || | |||||||| ||||||||||||| || |||||||| |
|
|
T |
24633314 |
ggtacttcaagtgctagaataccataagtgatttg-cagccattttttcttatgaaaaactactatatatacata |
24633241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 25018745 - 25018802
Alignment:
Q |
131 |
tacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaact |
189 |
Q |
|
|
|||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
T |
25018745 |
tacttcgagtgccagaattctataagtgatttgcgacct-gtttttcatatgaaaaact |
25018802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 13202104 - 13202002
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaag-ctaactgccacgatctgcactcc |
245 |
Q |
|
|
||||||||||||||||| || | ||||| | ||||||||||||| |||||||||||| ||| |||| | ||||||| |||||| |||||||| ||||| | |
|
|
T |
13202104 |
ttctataagtgatttgcgacatgtttttcc-tatgaaaaactactatttatacatagcaaa-ataactggaaaaagcctaact-ccacgatcagcacttc |
13202008 |
T |
 |
Q |
246 |
ttccat |
251 |
Q |
|
|
|||||| |
|
|
T |
13202007 |
ttccat |
13202002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1024 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold1024
Description:
Target: scaffold1024; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 124 - 340
Target Start/End: Complemental strand, 2969 - 2753
Alignment:
Q |
124 |
acgacggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaag |
222 |
Q |
|
|
|||| |||||||| |||||||||||||||| || ||||||| ||| ||||||| ||||||||||||| ||||||||||||| || |||| || |||||| |
|
|
T |
2969 |
acgatggtacttcgagtgctagaattctatgagagatttgcaaccaatttttt-atatgaaaaactattatttatacatagtgaaaataactgtaaaaag |
2871 |
T |
 |
Q |
223 |
ctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttccttcg |
322 |
Q |
|
|
||||||||||||| |||||| |||| | |||||| || ||||||||||||||| ||| |||||||| || ||||| |||||||||||||| |||||| |
|
|
T |
2870 |
ctaactgccacgaattgcacttcttctaacgaaaactgcatgtcccccacgtcttcaataagaaaactgatgattttttaattcaaattatttcccttcg |
2771 |
T |
 |
Q |
323 |
agaacaactgcttggctt |
340 |
Q |
|
|
| |||||||||||||||| |
|
|
T |
2770 |
acaacaactgcttggctt |
2753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 5e-44; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 128 - 348
Target Start/End: Complemental strand, 25621115 - 25620895
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagctaa |
226 |
Q |
|
|
||||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||| |||| | ||||||||||| |
|
|
T |
25621115 |
cggtacttcgagtgctagaattttataagtgatttgcgaccta-tttttcatatgaaaaactactatttacacatagtaaaaataactagaaaaagctaa |
25621017 |
T |
 |
Q |
227 |
ctgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattt-tccttcgaga |
325 |
Q |
|
|
||||||||| | |||| |||||||| |||| || ||||||||||||||| | | | |||| ||||| ||||||||||||||||||| | |||||| | |
|
|
T |
25621016 |
ctgccacgaacaacacttcttccatcaaaaactgattgtcccccacgtcttcattaaggaaaccgctgc-ttttgaattcaaattatttcttcttcgaca |
25620918 |
T |
 |
Q |
326 |
acaactgcttggcttcgaccaat |
348 |
Q |
|
|
||||||| |||| |||||||||| |
|
|
T |
25620917 |
acaactgtttggtttcgaccaat |
25620895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 7524752 - 7524624
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagctaac |
227 |
Q |
|
|
||||||| |||||||| |||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||| | || | |||||||||||| |
|
|
T |
7524752 |
ggtacttgaagtgctataattctataagtgatttgtgaccta-ttttccatatgaaaaactactatttatacatagtaaaaacaactggaaaaagctaac |
7524654 |
T |
 |
Q |
228 |
tgccacgatctgcactccttccatcgaaaa |
257 |
Q |
|
|
|||||||| | |||| | ||||||||||| |
|
|
T |
7524653 |
tgccacgaacaacacttcctccatcgaaaa |
7524624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 256
Target Start/End: Complemental strand, 4978840 - 4978711
Alignment:
Q |
128 |
cggtacttcaagtgctagaatt-ctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagcta |
225 |
Q |
|
|
||||||||| |||||||||||| |||||||| |||||| |||||||||| ||||||||||||||| |||||||||||| || |||| | |||||||||| |
|
|
T |
4978840 |
cggtacttcgagtgctagaatttctataagtaatttgcgacctattttt-catatgaaaaactacattttatacatagtgaaaataactggaaaaagcta |
4978742 |
T |
 |
Q |
226 |
actgccacgatctgcactccttccatcgaaa |
256 |
Q |
|
|
|||||||||| | || | |||||||||||| |
|
|
T |
4978741 |
actgccacgaacatcaattcttccatcgaaa |
4978711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 41132081 - 41132177
Alignment:
Q |
184 |
aaaactaccatttatacatagtaaatataaatgaaaaag--ctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtcttta |
279 |
Q |
|
|
|||||||| |||||||||||||||| |||| ||||||| |||||| |||||||| |||| ||||||||||||| ||| ||||| ||||||||||| |
|
|
T |
41132081 |
aaaactactatttatacatagtaaa-ataactgaaaaaagactaactaccacgatcatcacttcttccatcgaaaactgtttgtcctccacgtcttta |
41132177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 7948026 - 7947953
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
|||||||| |||||||||||||||||||||||||| ||| |||||| |||||||||||| || ||||||||| |
|
|
T |
7948026 |
ggtacttcgggtgctagaattctataagtgatttgcaacc--ctttttcttatgaaaaactattatatatacatag |
7947953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 1545634 - 1545599
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgc |
164 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |
|
|
T |
1545634 |
ggtacttcaagtgctcgaattctataagtgatttgc |
1545599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 12469031 - 12469096
Alignment:
Q |
138 |
agtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
||||||||||||||||||||||||||| ||| | |||| | ||||||||||||| || | ||||||| |
|
|
T |
12469031 |
agtgctagaattctataagtgatttgcgaccca-ttttccttatgaaaaactactatatgtacatag |
12469096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 9022507 - 9022403
Alignment:
Q |
172 |
tttttcatatgaaaaactacc-atttatacatagtaaatataaatgaaaaag-ctaactgccacgatctgcactccttccatcga-aaattgtctgtccc |
268 |
Q |
|
|
|||| |||||| ||||||||| |||||||||| | ||| |||| | |||||| ||||||||||||||| ||||| |||||||||| ||| ||| |||| | |
|
|
T |
9022507 |
ttttccatatggaaaactacctatttatacatcgaaaa-ataatttaaaaaggctaactgccacgatcagcacttcttccatcgagaaactgtttgtctc |
9022409 |
T |
 |
Q |
269 |
ccacgt |
274 |
Q |
|
|
|||||| |
|
|
T |
9022408 |
ccacgt |
9022403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 11993924 - 11993849
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
||||||||| || ||||||||| ||||| |||||||| |||| |||||| ||||||||||| |||||||||||| |
|
|
T |
11993924 |
cggtacttcgagcgctagaattttataaatgatttgcgacctctttttttc-atgaaaaactattatttatacatag |
11993849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 129 - 277
Target Start/End: Original strand, 17676659 - 17676806
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaag-ctaac |
227 |
Q |
|
|
|||||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||| |||| |||||||| ||||| |
|
|
T |
17676659 |
ggtacttcgagtgctagaattctataagtgatttgtgacccattttc-catatgaaaaactactatttatacatagtaaa-ataactgaaaaaggctaac |
17676756 |
T |
 |
Q |
228 |
tgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctt |
277 |
Q |
|
|
||| | |||| ||||| |||||||||||||||| ||||||||||||||| |
|
|
T |
17676757 |
tgctatgatcagcacttcttccatcgaaaattgattgtcccccacgtctt |
17676806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 15438049 - 15437899
Alignment:
Q |
128 |
cggtacttcaagtgctagaatt-ctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaagcta |
225 |
Q |
|
|
||||||||| |||||||||||| |||| |||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||| || ||||||||| |
|
|
T |
15438049 |
cggtacttcgagtgctagaatttctattagtgatttgcgacctattttt-catatgaaaaactacaatttatacatagtaaaaataactgaaaaaagcta |
15437951 |
T |
 |
Q |
226 |
actgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctt |
277 |
Q |
|
|
|||||||||| | ||||||||||| |||||| || ||| ||||||||||| |
|
|
T |
15437950 |
actgccacgaacaacactccttccaccgaaaactgcttgttccccacgtctt |
15437899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 272
Target Start/End: Original strand, 32890489 - 32890632
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa-gctaa |
226 |
Q |
|
|
||||||||| |||||||||||| |||||||||||||| ||||| |||| ||||| |||||||| |||||||||||||||| |||| ||||||| ||||| |
|
|
T |
32890489 |
cggtacttcgagtgctagaattttataagtgatttgcgaccta-ttttcgatatggaaaactactatttatacatagtaaa-ataattgaaaaaggctaa |
32890586 |
T |
 |
Q |
227 |
ctgccacgatctgcactccttccatcgaaaattgtctgtcccccac |
272 |
Q |
|
|
||||||||||| |||| | | |||||||||| | |||||||||| |
|
|
T |
32890587 |
ctgccacgatcaacacttccttcatcgaaaatcgcttgtcccccac |
32890632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 128 - 311
Target Start/End: Original strand, 2482114 - 2482294
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaagctaac |
227 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||| ||| | |||||| |||||||||| | ||||||| ||||| || || | ||||||||||||| |
|
|
T |
2482114 |
cggtacttcgagtgctagaattctataagtgatttgcgaccca-tttttcgaatgaaaaacttctatttataaatagt-aagatgactgaaaaagctaac |
2482211 |
T |
 |
Q |
228 |
tgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaatt |
311 |
Q |
|
|
|||||||| | |||| ||| ||||||||| || |||||||||||| || | | | |||| ||||| ||||||||||||||| |
|
|
T |
2482212 |
tgccacgaacaacacttctttcatcgaaaactgcttgtcccccacgttttcactaaggaaaccgctgc-ttttgaattcaaatt |
2482294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 21498124 - 21498048
Alignment:
Q |
131 |
tacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaa |
208 |
Q |
|
|
||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||| |||||||||||||||| |
|
|
T |
21498124 |
tacttcaagtgctagaattctataaatgatttgcgaccta-tttctcatatgaaaaactactatttatacatagtaaa |
21498048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 17637947 - 17638052
Alignment:
Q |
172 |
tttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa-gctaactgccacgatctgcactccttccatcgaaaattgtctgtccccc |
270 |
Q |
|
|
|||| ||||||||||||||| |||||||||||||||| |||| ||||||| ||||||||| | | || | ||| |||||||||||||||| |||||||| |
|
|
T |
17637947 |
ttttccatatgaaaaactactatttatacatagtaaa-ataactgaaaaaggctaactgctatgttcagaacttcttccatcgaaaattgattgtccccc |
17638045 |
T |
 |
Q |
271 |
acgtctt |
277 |
Q |
|
|
||||||| |
|
|
T |
17638046 |
acgtctt |
17638052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 28760665 - 28760590
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
||||||||| |||||||||||| ||||| ||||||| | || |||||||||||||||||| |||||||||||| |
|
|
T |
28760665 |
cggtacttcgagtgctagaattttataaatgatttg-cgtcttgtttttcatatgaaaaactcttatttatacatag |
28760590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 257
Target Start/End: Complemental strand, 26654137 - 26654008
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaagctaa |
226 |
Q |
|
|
||||||||| ||||||| ||||||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||| || |||| || |||||||||| |
|
|
T |
26654137 |
cggtacttcgagtgctaaaattctataagtgatttgcgatctattttt-catatgaaaaactactatttatacatagtgaaaataactgaaaaaagctaa |
26654039 |
T |
 |
Q |
227 |
ctgccacgatctgcactccttccatcgaaaa |
257 |
Q |
|
|
||||||||| | |||| | ||||||||||| |
|
|
T |
26654038 |
ctgccacgaacatcacttcctccatcgaaaa |
26654008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 24924960 - 24925039
Alignment:
Q |
123 |
aacgacggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacata |
203 |
Q |
|
|
|||| ||||||||| ||||||||||||||||||||||||||| | | |||||||| |||||||||||| || |||||||| |
|
|
T |
24924960 |
aacgccggtacttcgagtgctagaattctataagtgatttgcgaac-cttttttcaaatgaaaaactactatatatacata |
24925039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 16647147 - 16647221
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| || ||||||||| |
|
|
T |
16647147 |
ggtactttgagtgctagaattctataagtgatttgcgacc-cttttttcttatgaaaaactactatatatacatag |
16647221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 12568226 - 12568332
Alignment:
Q |
128 |
cggtacttcaagtgctagaatt-ctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagcta |
225 |
Q |
|
|
||||||||| |||||||||||| |||||| ||||||| |||| ||||| |||||||||||||| |||||||||||| ||| | || | |||||||||| |
|
|
T |
12568226 |
cggtacttcgagtgctagaatttctataaaagatttgcgacctcattttt-atatgaaaaactactatttatacatagcaaaaacaactggaaaaagcta |
12568324 |
T |
 |
Q |
226 |
actgccac |
233 |
Q |
|
|
||| |||| |
|
|
T |
12568325 |
actaccac |
12568332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 12425022 - 12425080
Alignment:
Q |
297 |
ttttgaattcaaattattttccttcgagaacaactgcttggcttcgaccaatcttctct |
355 |
Q |
|
|
||||||||| |||||||||||||||| |||||||||| | ||| |||||||||||||| |
|
|
T |
12425022 |
ttttgaatttgaattattttccttcgacaacaactgctcgactttgaccaatcttctct |
12425080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 16928602 - 16928474
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagt-aaatataaatgaaaaagctaactgccacgatctgcactcct |
246 |
Q |
|
|
||||||||| ||||||| ||||||||| |||||| ||||||| ||||||||||||| |||||| | |||| |||| ||||||||||| |||| || |
|
|
T |
16928602 |
ttctataagggatttgcgacctattttc-catatggaaaactattatttatacatagtaaaatat-ctttaaaaggctagctgccacgatcaacacttct |
16928505 |
T |
 |
Q |
247 |
tccatcgaaaattgtctgtcccccacgtctt |
277 |
Q |
|
|
||||||||||| | ||||||||||||||| |
|
|
T |
16928504 |
tccatcgaaaaccgcttgtcccccacgtctt |
16928474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 340
Target Start/End: Complemental strand, 36499557 - 36499346
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaagctaac |
227 |
Q |
|
|
|||||||| ||| |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||| | | || || ||||||||||| |
|
|
T |
36499557 |
ggtacttcgagttttagaattctataagtgatttacgacctatttttt-atatgaaaaactattatttatacatagtgacaacaactgcaaaaagctaac |
36499459 |
T |
 |
Q |
228 |
tgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaatta-ttttccttcgagaa |
326 |
Q |
|
|
||||| || ||||||| ||||||||||||| | ||||||||||||||| ||| |||| |||| || ||||||||| ||||| ||||||||||| | |
|
|
T |
36499458 |
tgccatgaactgcacttcttccatcgaaaactccatgtcccccacgtcttcaataagaaatctgcggc-ttttgaatttgaattatttttccttcgacag |
36499360 |
T |
 |
Q |
327 |
caactgcttggctt |
340 |
Q |
|
|
||||| ||| |||| |
|
|
T |
36499359 |
caactacttagctt |
36499346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 297
Target Start/End: Complemental strand, 28619314 - 28619148
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaagct-aa |
226 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||| ||| | |||||| ||||||||||| ||||||||||||| ||| |||| || |||||||| || |
|
|
T |
28619314 |
ggtacttctagtgctagaattctataagtgatttgcgaccca-tttttcttatgaaaaact--catttatacatag-aaaaataactgtaaaaagctaaa |
28619219 |
T |
 |
Q |
227 |
ctgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctt |
297 |
Q |
|
|
|||||| || ||||||| |||||||||||||||| |||||| ||||| || ||| |||||||| ||||| |
|
|
T |
28619218 |
ctgccatgaactgcacttcttccatcgaaaattggttgtccctcacgttttcaataagaaaactgttgctt |
28619148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 21390754 - 21390882
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagctaac |
227 |
Q |
|
|
|||||||| |||||| ||||||||||| | ||||| ||||||||| ||||||||||||||| |||||||||||||||| || ||| ||||||| |||| |
|
|
T |
21390754 |
ggtacttcgagtgcttgaattctataaataatttgtgacctatttt-tcatatgaaaaactattatttatacatagtaaaaatgaatggaaaaaggtaac |
21390852 |
T |
 |
Q |
228 |
tgccacgatctgcactccttccatcgaaaa |
257 |
Q |
|
|
|||| | | | ||||||||| |||||||| |
|
|
T |
21390853 |
tgccgcaaacaacactccttcgatcgaaaa |
21390882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 24364133 - 24364025
Alignment:
Q |
217 |
aaaaagctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgc--tttttgaattcaaattatt |
314 |
Q |
|
|
|||||||||||| |||||| ||||||| | ||||||||||| || ||||||||||||||| ||| ||||||| |||| ||||||||||||||| || |
|
|
T |
24364133 |
aaaaagctaactaccacgaactgcacttcatccatcgaaaactgcttgtcccccacgtcttcaataagaaaactactgctttttttgaattcaaatactt |
24364034 |
T |
 |
Q |
315 |
ttccttcga |
323 |
Q |
|
|
| ||||||| |
|
|
T |
24364033 |
tcccttcga |
24364025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 9423216 - 9423315
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcat-atgaaaaactaccatttatacatagtaaatataaatgaaaaagctaa |
226 |
Q |
|
|
||||||||| |||||||||||| ||||| |||||||| |||| ||||||| | ||||||||||| |||||||||||| | | ||||||| |||| |||| |
|
|
T |
9423216 |
cggtacttcgagtgctagaattttataaatgatttgcgaccttttttttcttcatgaaaaactattatttatacatagaagaaataaatgcaaaaactaa |
9423315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 31533043 - 31532997
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctatttt |
174 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
T |
31533043 |
cggtacttcgagtgctagaattctataagtgatttgcgacctatttt |
31532997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 22987580 - 22987657
Alignment:
Q |
52 |
caatctttttccagaaagtgcgtgaatgttcatca-----ataggtttctttatgaagaagacgaagttttgtacgaa |
124 |
Q |
|
|
|||||||||||||||||||| |||||||||||||| ||||||| |||||| || |||| ||||||||||||||| |
|
|
T |
22987580 |
caatctttttccagaaagtgtgtgaatgttcatcatattcataggttgctttataaacaagatgaagttttgtacgaa |
22987657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 323
Target Start/End: Original strand, 24309193 - 24309302
Alignment:
Q |
217 |
aaaaagctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctttaatgggaaaact-gctgc--tttttgaattcaaattat |
313 |
Q |
|
|
|||||||||||| |||||| ||||||| | ||||||||||| || ||||||||||||||| ||| ||||||| |||| ||||||||||||||| | |
|
|
T |
24309193 |
aaaaagctaactaccacgaactgcacttcatccatcgaaaactgcttgtcccccacgtcttcaataagaaaactaactgctttttttgaattcaaatact |
24309292 |
T |
 |
Q |
314 |
tttccttcga |
323 |
Q |
|
|
|| ||||||| |
|
|
T |
24309293 |
ttcccttcga |
24309302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 25667236 - 25667188
Alignment:
Q |
172 |
tttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa |
221 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||| |||| ||||||| |
|
|
T |
25667236 |
tttttcatatggaaaactactatttatacatagtaaa-ataactgaaaaa |
25667188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 356
Target Start/End: Original strand, 12145212 - 12145305
Alignment:
Q |
263 |
tgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattattttccttcgagaacaactgcttggcttcgaccaatcttctctc |
356 |
Q |
|
|
||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||| |||| |
|
|
T |
12145212 |
tgtcccccacgtcttcaatggcaaaaccgttgctttttgaattcaaattattttctttcgacaacatctgcttggcttcgaccaatcttgtctc |
12145305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 27717978 - 27717858
Alignment:
Q |
123 |
aacgacggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaa |
221 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| || | | ||||| |
|
|
T |
27717978 |
aacgccggtacttcgagtgctagaattctataagtgatttgggaccta-tttttcatatgaaaaactaatatttatacatagtaaaaatgactaaaaaaa |
27717880 |
T |
 |
Q |
222 |
gctaactgccacgatctgcact |
243 |
Q |
|
|
|||||||||||||||| ||||| |
|
|
T |
27717879 |
gctaactgccacgatcagcact |
27717858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 14132117 - 14132041
Alignment:
Q |
131 |
tacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaa |
208 |
Q |
|
|
|||||||| ||||||||||||||||||||||||| |||| |||| | ||||||||||||| |||||||||||||||| |
|
|
T |
14132117 |
tacttcaactgctagaattctataagtgatttgcaacct-cttttccgtatgaaaaactactatttatacatagtaaa |
14132041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 9101700 - 9101630
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttat |
198 |
Q |
|
|
||||||||| ||||||||| || |||||||||||||| || || |||||||||||||||||||| |||||| |
|
|
T |
9101700 |
cggtacttcgagtgctagagttatataagtgatttgcgacatagtttttcatatgaaaaactactatttat |
9101630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 53589117 - 53589043
Alignment:
Q |
129 |
ggtacttcaagtgctagaattctataagtgatttgccacctattttttcata-tgaaaaactaccatttatacata |
203 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || |||||||| |
|
|
T |
53589117 |
ggtacttcgagtgctagaattctataagtgatttgcgacc-attttttcctaatgaaaaactactatatatacata |
53589043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 12145106 - 12145157
Alignment:
Q |
138 |
agtgctagaattctataagtgatttgccacctattttttcatatgaaaaacta |
190 |
Q |
|
|
||||||||||||||||||||||||||| || || ||||||||||||||||||| |
|
|
T |
12145106 |
agtgctagaattctataagtgatttgcgacata-tttttcatatgaaaaacta |
12145157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 48896134 - 48896284
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatg-aaaaagctaa |
226 |
Q |
|
|
|||| |||| ||||||| |||||||||| ||||||| || | |||||| |||||||||||| |||||||||||| | | |||| | |||||||||| |
|
|
T |
48896134 |
cggtgcttcgagtgctataattctataaatgatttgtgacatgatttttc-tatgaaaaactattatttatacatagaagaaataatcgtaaaaagctaa |
48896232 |
T |
 |
Q |
227 |
-ctgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctt |
277 |
Q |
|
|
||||||||| ||||||| |||||||||||| | | |||||||||| |||| |
|
|
T |
48896233 |
actgccacgagatgcactcattccatcgaaaactatttgtcccccacatctt |
48896284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 44450873 - 44450798
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
||||||||| |||||||||||| ||||| |||||||| |||| |||||| ||||||||||| |||||||||||| |
|
|
T |
44450873 |
cggtacttcgagtgctagaattttataaatgatttgcgacctctttttt-tcatgaaaaactattatttatacatag |
44450798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 7536083 - 7535984
Alignment:
Q |
179 |
tatgaaaaactaccatttatacatagtaaatataaatg-aaaaagctaactgccacgatctgcactccttccatcgaaaattgtctgtcccccacgtctt |
277 |
Q |
|
|
|||| ||||||| |||||||||||||||| |||| || |||||||||||| ||||||| |||| | ||||||||||| || ||||||| ||||||| |
|
|
T |
7536083 |
tatgcaaaactattatttatacatagtaaaaataactggaaaaagctaactttcacgatcaacacttcctccatcgaaaactgcttgtcccctacgtctt |
7535984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 15759703 - 15759867
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaa-aaactaccatttatacatagtaaatataaatgaaaaa--gctaactgccacgatctgcactc |
244 |
Q |
|
|
|||||||| |||||||| ||| ||||| |||||||| ||||||| |||||||||||||||| |||| ||||||| ||||||| |||| ||| |||| |
|
|
T |
15759703 |
ttctataaatgatttgcgacccattttc-catatgaataaactactatttatacatagtaaa-ataactgaaaaaaggctaactcccacaatcaacactt |
15759800 |
T |
 |
Q |
245 |
cttccatcgaaaattgtctgtcccccacgtctttaatgggaaaactgctgctttttgaattcaaattatt |
314 |
Q |
|
|
||||||| ||||||| ||||||| ||||||| || | |||| ||| | |||||||||||||||||| |
|
|
T |
15759801 |
cttccat--taaattgtttgtcccctacgtcttcgttgtggaaaccgct-cattttgaattcaaattatt |
15759867 |
T |
 |
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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 45279917 - 45279852
Alignment:
Q |
138 |
agtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatag |
204 |
Q |
|
|
|||||||||||| ||||||||||||| ||| ||||||| ||||||||||||| || ||||||||| |
|
|
T |
45279917 |
agtgctagaattatataagtgatttgtgaccc-ttttttcttatgaaaaactactatatatacatag |
45279852 |
T |
 |
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Target: scaffold0167 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0167
Description:
Target: scaffold0167; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 10276 - 10191
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataa-atgaaaaagctaactgccac |
233 |
Q |
|
|
||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |
|
|
T |
10276 |
ttctataagtgatttgcgacctattttt-catatgaaaaactactatttatacatagtaaatataacttgaaaaagttaactgccac |
10191 |
T |
 |
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Target: scaffold0320 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0320
Description:
Target: scaffold0320; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 6508 - 6593
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaat-gaaaaagctaactgccac |
233 |
Q |
|
|
||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||| |||| | ||||||| |||||||||| |
|
|
T |
6508 |
ttctataagtgatttgcgacctatttt-tcatatgaaaaactactatttatacatattaaaaataactggaaaaagttaactgccac |
6593 |
T |
 |
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Target: scaffold0431 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0431
Description:
Target: scaffold0431; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 4953 - 4895
Alignment:
Q |
297 |
ttttgaattcaaattattttccttcgagaacaactgcttggcttcgaccaatcttctct |
355 |
Q |
|
|
||||||||| |||||||||||||||| |||||||||| | ||| |||||||||||||| |
|
|
T |
4953 |
ttttgaatttgaattattttccttcgacaacaactgctcgactttgaccaatcttctct |
4895 |
T |
 |
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Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 26927 - 26842
Alignment:
Q |
124 |
acgacggtacttcaagtgct-agaatt-ctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaa |
208 |
Q |
|
|
||||||||||||| |||||| |||||| |||||| |||||||| ||| ||||| |||||| |||||||| |||||||||||||||| |
|
|
T |
26927 |
acgacggtacttcgagtgcttagaatttctataaatgatttgcgacccattttc-catatggaaaactactatttatacatagtaaa |
26842 |
T |
 |
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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 51649 - 51570
Alignment:
Q |
128 |
cggtacttcaagtgctagaattctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaa |
208 |
Q |
|
|
||||||| | |||||||||||||||||| ||||| | ||| ||||| |||||| |||||||| |||||||||||||||| |
|
|
T |
51649 |
cggtactgcgagtgctagaattctataaacgatttacgacccattttc-catatggaaaactactatttatacatagtaaa |
51570 |
T |
 |
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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 38887 - 38816
Alignment:
Q |
148 |
ttctataagtgatttgccacctattttttcatatgaaaaactaccatttatacatagtaaatataaatgaaaaa |
221 |
Q |
|
|
|||||||||||||||| ||||||||| |||||| |||||||| |||||||||||| ||| |||| ||||||| |
|
|
T |
38887 |
ttctataagtgatttgtgacctattttc-catatggaaaactactatttatacatagcaaa-ataactgaaaaa |
38816 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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