View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0778_high_42 (Length: 304)
Name: NF0778_high_42
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0778_high_42 |
 | |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 44499644 - 44499851
Alignment:
| Q |
1 |
ttaaatgactgagatttttaaataaattttacgtacaaatttaaattaatttatgcacaataaatatttcaaaagtcacatccattaacttctccatgaa |
100 |
Q |
| |
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| T |
44499644 |
ttaaatgactgagatttttaaataaattttacgtacaaatttaaattaatttatgcacaataaatatttcaaaagtcacatccattaacttctccatgaa |
44499743 |
T |
|
| Q |
101 |
taccaataaatttatcagaacttttcttattagttggaaaaaactagtaattatctcagttgctagatactaattcaaaatgatcctatatttcaaatgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44499744 |
taccaataaatttatcagaacttttcttattagttggaaaaaactagtaattatctcagttgctagatactaattcaaaatgatcctatatttcaaatgc |
44499843 |
T |
|
| Q |
201 |
acgccagc |
208 |
Q |
| |
|
|||||||| |
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|
| T |
44499844 |
acgccagc |
44499851 |
T |
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