View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0778_high_56 (Length: 258)
Name: NF0778_high_56
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0778_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 41697838 - 41697610
Alignment:
| Q |
1 |
gctttataagtattctttccttttttggtctttatgttatgcagctacttaattaaaggaagattgccaaatgggctattctttgttgcttatacatatg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
41697838 |
gctttataagtattctttccttttttggtctttatgttatgcagctacttaattaaaggaatattgccaaatgggctattctttgttgcttatacatatg |
41697739 |
T |
|
| Q |
101 |
ctggggagcttccaagctctgcatttgcatttaatagcaatggattggtaaaaattccctattatttcaaatgatctcttaatattaaagtaagtattaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41697738 |
ctggggagcttccaagctctgcatttgcatttaatagcaatggattggtaaaaattccctattatttcaaatgatctcttaatattaaagtaagtattaa |
41697639 |
T |
|
| Q |
201 |
gaacaaaattttctttatgatcattaggc |
229 |
Q |
| |
|
||||||||||| ||||||||||||||||| |
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| T |
41697638 |
gaacaaaatttgctttatgatcattaggc |
41697610 |
T |
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