View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0778_high_63 (Length: 252)

Name: NF0778_high_63
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0778_high_63
NF0778_high_63
[»] scaffold0160 (1 HSPs)
scaffold0160 (6-252)||(21952-22208)
[»] chr5 (51 HSPs)
chr5 (181-250)||(6525894-6525963)
chr5 (181-252)||(27003966-27004038)
chr5 (184-252)||(5203609-5203678)
chr5 (184-252)||(9053974-9054041)
chr5 (185-233)||(22792131-22792179)
chr5 (181-252)||(671062-671132)
chr5 (181-252)||(16371475-16371545)
chr5 (181-252)||(35619144-35619215)
chr5 (185-252)||(36319505-36319571)
chr5 (181-252)||(37940973-37941043)
chr5 (185-252)||(40596015-40596081)
chr5 (185-252)||(43150161-43150227)
chr5 (181-251)||(9068858-9068927)
chr5 (133-237)||(9599313-9599423)
chr5 (205-251)||(35362914-35362960)
chr5 (129-252)||(11408370-11408499)
chr5 (188-252)||(32466631-32466696)
chr5 (184-252)||(1833322-1833389)
chr5 (184-252)||(4429944-4430011)
chr5 (184-252)||(10083931-10083999)
chr5 (181-237)||(10165587-10165642)
chr5 (184-252)||(10393505-10393572)
chr5 (184-252)||(14126961-14127028)
chr5 (184-252)||(18990537-18990604)
chr5 (184-252)||(36245997-36246064)
chr5 (184-252)||(40318788-40318855)
chr5 (184-252)||(41408685-41408752)
chr5 (181-252)||(41071117-41071187)
chr5 (186-252)||(972597-972662)
chr5 (181-251)||(39916518-39916587)
chr5 (187-252)||(1271158-1271223)
chr5 (211-252)||(24638038-24638079)
chr5 (179-252)||(38975741-38975813)
chr5 (184-252)||(4165017-4165084)
chr5 (181-252)||(10011525-10011597)
chr5 (184-252)||(16496658-16496725)
chr5 (184-252)||(17869127-17869194)
chr5 (184-252)||(20695486-20695553)
chr5 (184-252)||(23074647-23074714)
chr5 (184-252)||(24051461-24051528)
chr5 (184-252)||(26802392-26802459)
chr5 (184-252)||(26809942-26810009)
chr5 (184-252)||(26824969-26825036)
chr5 (184-252)||(34930283-34930350)
chr5 (184-252)||(36136865-36136932)
chr5 (184-252)||(36569337-36569404)
chr5 (184-252)||(36790318-36790385)
chr5 (184-252)||(36854161-36854228)
chr5 (184-252)||(39150929-39150996)
chr5 (184-252)||(42448269-42448336)
chr5 (181-252)||(42645466-42645538)
[»] chr2 (49 HSPs)
chr2 (184-252)||(39417500-39417568)
chr2 (132-237)||(37103322-37103433)
chr2 (129-252)||(22999072-22999201)
chr2 (201-252)||(18741400-18741451)
chr2 (181-252)||(22382335-22382406)
chr2 (181-252)||(22914361-22914432)
chr2 (184-251)||(25219846-25219913)
chr2 (181-252)||(5618450-5618520)
chr2 (181-252)||(8293558-8293628)
chr2 (132-252)||(18055859-18055984)
chr2 (181-251)||(19954903-19954971)
chr2 (187-237)||(32517835-32517885)
chr2 (129-251)||(9993167-9993295)
chr2 (184-252)||(17052615-17052683)
chr2 (181-237)||(38463194-38463249)
chr2 (184-252)||(43461337-43461404)
chr2 (181-252)||(36685406-36685476)
chr2 (185-251)||(8859291-8859356)
chr2 (181-251)||(43841716-43841785)
chr2 (203-252)||(637041-637090)
chr2 (187-252)||(816407-816472)
chr2 (187-252)||(19967795-19967859)
chr2 (184-252)||(12236179-12236246)
chr2 (181-237)||(21840467-21840522)
chr2 (184-252)||(23497515-23497582)
chr2 (184-248)||(33898289-33898351)
chr2 (184-252)||(45049443-45049510)
chr2 (181-252)||(3048597-3048667)
chr2 (184-251)||(13491084-13491151)
chr2 (181-252)||(16010616-16010686)
chr2 (181-252)||(20251488-20251558)
chr2 (185-252)||(33607102-33607168)
chr2 (181-252)||(43035495-43035565)
chr2 (184-237)||(8532164-8532216)
chr2 (184-237)||(40710852-40710905)
chr2 (184-252)||(4014816-4014883)
chr2 (181-251)||(12400699-12400766)
chr2 (184-252)||(13267978-13268045)
chr2 (184-252)||(15897272-15897339)
chr2 (188-252)||(18999391-18999454)
chr2 (216-252)||(25994656-25994692)
chr2 (184-252)||(35476493-35476560)
chr2 (184-252)||(36216756-36216823)
chr2 (184-252)||(36754744-36754811)
chr2 (184-252)||(36755006-36755073)
chr2 (184-252)||(39070077-39070144)
chr2 (181-252)||(39218736-39218807)
chr2 (129-169)||(40630260-40630300)
chr2 (181-233)||(41520553-41520604)
[»] chr1 (47 HSPs)
chr1 (184-245)||(8793184-8793245)
chr1 (181-252)||(26261296-26261366)
chr1 (181-252)||(42630988-42631058)
chr1 (181-252)||(27856052-27856122)
chr1 (181-252)||(35068929-35069000)
chr1 (181-252)||(45788678-45788748)
chr1 (187-248)||(32210560-32210621)
chr1 (129-252)||(44836120-44836249)
chr1 (187-252)||(49632616-49632680)
chr1 (129-229)||(7204533-7204639)
chr1 (185-252)||(12176555-12176622)
chr1 (185-252)||(12502759-12502826)
chr1 (181-252)||(43086474-43086544)
chr1 (181-252)||(47429595-47429665)
chr1 (188-251)||(49773457-49773520)
chr1 (202-252)||(37315056-37315106)
chr1 (184-252)||(11080963-11081031)
chr1 (181-252)||(25083123-25083195)
chr1 (184-252)||(39606463-39606530)
chr1 (184-252)||(40958577-40958644)
chr1 (184-252)||(48314225-48314292)
chr1 (188-252)||(50905496-50905560)
chr1 (133-229)||(8312553-8312655)
chr1 (181-252)||(24254414-24254483)
chr1 (181-252)||(27227138-27227209)
chr1 (181-252)||(36586306-36586376)
chr1 (201-252)||(37186819-37186870)
chr1 (181-252)||(41651128-41651199)
chr1 (189-252)||(50145135-50145197)
chr1 (137-252)||(236575-236694)
chr1 (187-237)||(13116987-13117037)
chr1 (214-252)||(16867402-16867440)
chr1 (133-232)||(32947621-32947726)
chr1 (189-252)||(2208900-2208960)
chr1 (187-252)||(15331065-15331129)
chr1 (187-252)||(50248090-50248154)
chr1 (211-252)||(52492684-52492725)
chr1 (188-252)||(5598363-5598426)
chr1 (187-227)||(13979745-13979785)
chr1 (184-252)||(17068210-17068277)
chr1 (184-232)||(17540099-17540146)
chr1 (184-252)||(19338181-19338248)
chr1 (184-252)||(20164076-20164143)
chr1 (181-252)||(22332212-22332284)
chr1 (184-252)||(35758333-35758400)
chr1 (184-252)||(48731759-48731826)
chr1 (184-252)||(49948299-49948366)
[»] chr3 (44 HSPs)
chr3 (184-252)||(54923544-54923612)
chr3 (181-252)||(4659593-4659664)
chr3 (181-252)||(37278538-37278609)
chr3 (186-252)||(10511284-10511349)
chr3 (132-252)||(7131505-7131621)
chr3 (184-252)||(32597348-32597417)
chr3 (183-251)||(10662041-10662108)
chr3 (181-244)||(8526102-8526165)
chr3 (196-251)||(9174605-9174660)
chr3 (181-252)||(21129101-21129172)
chr3 (185-252)||(27845117-27845184)
chr3 (181-252)||(28731902-28731972)
chr3 (181-252)||(40559729-40559799)
chr3 (186-252)||(35359777-35359842)
chr3 (202-252)||(39948601-39948651)
chr3 (184-252)||(11076463-11076530)
chr3 (184-252)||(34397738-34397805)
chr3 (188-252)||(38417727-38417791)
chr3 (184-252)||(52256755-52256822)
chr3 (181-252)||(1242272-1242342)
chr3 (181-252)||(8128293-8128363)
chr3 (181-252)||(12088285-12088355)
chr3 (181-252)||(24910291-24910361)
chr3 (136-170)||(10071606-10071640)
chr3 (186-252)||(25118709-25118774)
chr3 (184-252)||(2096586-2096655)
chr3 (184-252)||(29212066-29212135)
chr3 (181-242)||(32635434-32635494)
chr3 (184-252)||(35069371-35069440)
chr3 (198-251)||(50735879-50735932)
chr3 (198-251)||(50776923-50776976)
chr3 (184-252)||(3440784-3440851)
chr3 (184-252)||(3917824-3917891)
chr3 (184-252)||(4232180-4232247)
chr3 (184-252)||(5998785-5998852)
chr3 (184-252)||(7552653-7552720)
chr3 (184-252)||(8381137-8381204)
chr3 (184-252)||(9583426-9583493)
chr3 (184-252)||(10229015-10229082)
chr3 (184-252)||(13525227-13525294)
chr3 (181-237)||(32591027-32591082)
chr3 (184-252)||(32960981-32961048)
chr3 (184-252)||(42296769-42296836)
chr3 (184-252)||(48555894-48555961)
[»] chr8 (43 HSPs)
chr8 (181-252)||(32778553-32778624)
chr8 (184-251)||(28183714-28183781)
chr8 (133-232)||(12320988-12321093)
chr8 (181-242)||(40216835-40216896)
chr8 (184-252)||(20662580-20662647)
chr8 (184-252)||(26738029-26738096)
chr8 (184-252)||(37817434-37817501)
chr8 (181-252)||(33128167-33128238)
chr8 (181-250)||(7772055-7772123)
chr8 (184-252)||(24242586-24242655)
chr8 (184-252)||(10926089-10926156)
chr8 (188-232)||(11021399-11021443)
chr8 (184-252)||(16395431-16395498)
chr8 (184-252)||(37295184-37295251)
chr8 (200-252)||(37820896-37820948)
chr8 (188-232)||(40418190-40418234)
chr8 (181-252)||(5895798-5895868)
chr8 (197-252)||(24197830-24197885)
chr8 (181-252)||(24241901-24241971)
chr8 (189-236)||(30779712-30779759)
chr8 (181-252)||(34540067-34540137)
chr8 (186-252)||(14188150-14188215)
chr8 (185-252)||(2527261-2527325)
chr8 (184-252)||(5700650-5700719)
chr8 (185-238)||(14344665-14344718)
chr8 (184-252)||(4430738-4430805)
chr8 (184-252)||(4977037-4977104)
chr8 (184-252)||(6317358-6317425)
chr8 (184-252)||(10096670-10096737)
chr8 (189-252)||(15589258-15589319)
chr8 (184-252)||(17919818-17919885)
chr8 (184-252)||(19649501-19649568)
chr8 (184-252)||(23681068-23681135)
chr8 (184-252)||(25063398-25063465)
chr8 (184-252)||(27817452-27817519)
chr8 (184-252)||(27849746-27849813)
chr8 (184-252)||(27928216-27928283)
chr8 (181-237)||(31941052-31941107)
chr8 (184-252)||(34711558-34711625)
chr8 (184-252)||(36586540-36586607)
chr8 (184-252)||(37708450-37708517)
chr8 (184-252)||(38953483-38953550)
chr8 (181-228)||(41562497-41562545)
[»] chr7 (39 HSPs)
chr7 (156-232)||(39580571-39580649)
chr7 (181-252)||(8059900-8059971)
chr7 (181-244)||(22702449-22702512)
chr7 (181-252)||(45957336-45957407)
chr7 (133-252)||(9506844-9506969)
chr7 (184-252)||(2228083-2228150)
chr7 (181-252)||(41708546-41708615)
chr7 (184-252)||(46021433-46021501)
chr7 (186-245)||(6328183-6328242)
chr7 (181-252)||(12961826-12961897)
chr7 (181-252)||(29151638-29151708)
chr7 (186-252)||(43188590-43188657)
chr7 (132-252)||(47086303-47086428)
chr7 (198-252)||(44136129-44136183)
chr7 (184-252)||(7312456-7312523)
chr7 (188-252)||(9234250-9234313)
chr7 (184-252)||(10061019-10061086)
chr7 (184-252)||(17895692-17895759)
chr7 (184-252)||(45041736-45041803)
chr7 (181-252)||(3861339-3861409)
chr7 (181-252)||(4227389-4227459)
chr7 (181-228)||(10422533-10422579)
chr7 (181-252)||(29628387-29628457)
chr7 (181-252)||(30627679-30627749)
chr7 (181-252)||(46910910-46910981)
chr7 (182-252)||(33512853-33512922)
chr7 (188-252)||(2354798-2354863)
chr7 (187-252)||(12645300-12645365)
chr7 (184-252)||(31299998-31300067)
chr7 (181-252)||(40857345-40857413)
chr7 (184-252)||(46275006-46275075)
chr7 (184-252)||(4674312-4674379)
chr7 (184-252)||(6327269-6327336)
chr7 (188-252)||(16862450-16862513)
chr7 (188-252)||(28649369-28649432)
chr7 (184-252)||(40011992-40012059)
chr7 (184-252)||(40656111-40656178)
chr7 (184-252)||(45236988-45237055)
chr7 (181-237)||(46734134-46734189)
[»] chr4 (40 HSPs)
chr4 (133-237)||(13849357-13849467)
chr4 (129-233)||(46107390-46107500)
chr4 (188-252)||(51281528-51281593)
chr4 (185-252)||(37759488-37759555)
chr4 (187-252)||(37340110-37340175)
chr4 (181-237)||(3084260-3084315)
chr4 (181-249)||(9696297-9696365)
chr4 (196-252)||(32057726-32057782)
chr4 (184-252)||(47462039-47462106)
chr4 (201-252)||(33530294-33530345)
chr4 (181-252)||(52772171-52772241)
chr4 (184-252)||(35828332-35828401)
chr4 (184-252)||(7413150-7413217)
chr4 (184-252)||(7459230-7459297)
chr4 (184-252)||(31375171-31375238)
chr4 (187-251)||(38944384-38944448)
chr4 (181-252)||(1083563-1083633)
chr4 (181-252)||(24550868-24550938)
chr4 (181-252)||(25586330-25586400)
chr4 (181-252)||(30044587-30044657)
chr4 (185-252)||(32233671-32233737)
chr4 (181-252)||(37166193-37166263)
chr4 (181-252)||(42856618-42856688)
chr4 (188-237)||(28758439-28758488)
chr4 (184-237)||(40379716-40379769)
chr4 (133-252)||(46343330-46343455)
chr4 (203-252)||(50981732-50981781)
chr4 (188-249)||(54096946-54097006)
chr4 (181-237)||(2942453-2942508)
chr4 (184-252)||(5333209-5333276)
chr4 (184-252)||(6487904-6487971)
chr4 (184-252)||(7512825-7512892)
chr4 (184-252)||(16476940-16477007)
chr4 (184-252)||(16971685-16971752)
chr4 (184-252)||(24712146-24712213)
chr4 (184-252)||(34684260-34684327)
chr4 (184-252)||(39997776-39997843)
chr4 (186-242)||(43588825-43588880)
chr4 (184-252)||(51675670-51675737)
chr4 (181-237)||(52556402-52556456)
[»] chr6 (22 HSPs)
chr6 (124-237)||(2747542-2747661)
chr6 (136-252)||(9727499-9727620)
chr6 (202-251)||(13032086-13032135)
chr6 (184-252)||(31241994-31242060)
chr6 (136-232)||(9297761-9297863)
chr6 (184-252)||(2314600-2314669)
chr6 (184-252)||(5603450-5603517)
chr6 (181-252)||(22721306-22721378)
chr6 (185-251)||(30614918-30614981)
chr6 (181-252)||(1855061-1855131)
chr6 (185-252)||(5626063-5626129)
chr6 (181-252)||(5660454-5660524)
chr6 (181-228)||(9949178-9949224)
chr6 (181-252)||(19225821-19225892)
chr6 (184-252)||(32643727-32643798)
chr6 (184-252)||(2959051-2959118)
chr6 (184-252)||(8329561-8329628)
chr6 (184-252)||(8448145-8448212)
chr6 (184-252)||(8456949-8457016)
chr6 (184-252)||(8939684-8939751)
chr6 (185-252)||(21513131-21513199)
chr6 (184-252)||(31057890-31057957)
[»] scaffold0244 (1 HSPs)
scaffold0244 (184-252)||(7760-7827)
[»] scaffold0633 (1 HSPs)
scaffold0633 (181-252)||(3797-3868)
[»] scaffold0014 (1 HSPs)
scaffold0014 (185-252)||(195800-195866)
[»] scaffold0013 (1 HSPs)
scaffold0013 (181-252)||(90624-90694)
[»] scaffold0223 (1 HSPs)
scaffold0223 (190-252)||(22984-23046)
[»] scaffold0595 (1 HSPs)
scaffold0595 (184-252)||(403-470)
[»] scaffold0402 (1 HSPs)
scaffold0402 (184-252)||(1244-1311)
[»] scaffold0057 (1 HSPs)
scaffold0057 (188-252)||(64345-64408)
[»] scaffold0008 (1 HSPs)
scaffold0008 (184-252)||(39316-39383)


Alignment Details
Target: scaffold0160 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 21952 - 22208
Alignment:
Q  6 agtagcataggtagcttttagcatgtcgtttggtcttctagtttgggnnnnnnnnct-aattaataaaaatgaagagtgtaaataattatgtgttatatt 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||||||||||    
T  21952 agtagcattggtagcttttagcatgtcgtttggtcttctagtttgggaaaaaaaaattaattaataaaaatgaagagtgtaaataattatgtgttatatt 22051  T
Q  105 gtgttgtcc----gtctcaatagaaatcgtcccataagtcctaggtcaactgacaaaaatgtcaaaattgatagccagacg-----atcggggttcgaat 195  Q
    ||||||||     ||||||||||||||||||||||||||| ||  |||||| | |||||||||||||||||||||| ||||     |||||||||||||     
T  22052 gtgttgtcatcatgtctcaatagaaatcgtcccataagtcttaactcaactaataaaaatgtcaaaattgatagccggacgtcatgatcggggttcgaac 22151  T
Q  196 cccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22152 cccgatacctccactttgtgtgtgtgagtttatgatgactttgtcatctcgtctatc 22208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 6525894 - 6525963
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtcta 250  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  6525894 gatcggggttcgaaccccaatacctccactttgtgtgtgtgagtttatgatgactttgtcatctcttcta 6525963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 27004038 - 27003966
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||||||  |||||||||| ||||||||||| ||||| |||||||| |||| |||||||||    
T  27004038 gatcggggttcgaatcccggcacctccacttatgtgtgtgtgagtttataatgactttgtcatttcgtctatc 27003966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 5203609 - 5203678
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||| |||| | |||||||    
T  5203609 cggggttcgaaccccgatacctccacttgtgtgtgtgtgagtttataatgactttgtcattttgtctatc 5203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 9054041 - 9053974
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| |||| |||| |||||||||    
T  9054041 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 9053974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 22792179 - 22792131
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatga 233  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  22792179 ggggttcgaaccccgacacctccactttgtgtgtgtgagtttatgatga 22792131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 671132 - 671062
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| ||||||||||||||  ||||||||||| ||||| ||||||||  ||| |||||||||    
T  671132 gatcggggttcgaaccccgatacctccac-gtgtgtgtgtgagtttataatgactttgccatttcgtctatc 671062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 16371545 - 16371475
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||| ||| |||||||||    
T  16371545 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttaccatttcgtctatc 16371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 35619215 - 35619144
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| |||||||| ||  |||||||||| ||||||| ||| ||||||||||||||| |||||||| ||||    
T  35619215 gatcggagttcgaattccagtacctccactctgtgtgtatgagtttatgatgactttaccatctcgtttatc 35619144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 36319571 - 36319505
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| ||| |||| |||| |||||||||    
T  36319571 ggggttcgaaccccggtacctccactt-gtgtgtgtgaatttataatggctttgtcatttcgtctatc 36319505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 37940973 - 37941043
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  37940973 gatcggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 37941043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 40596015 - 40596081
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  40596015 ggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 40596081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 43150227 - 43150161
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||| ||||||||| ||| |||||||||    
T  43150227 ggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttaccatttcgtctatc 43150161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 9068858 - 9068927
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||||||||||| |||| |||||||| || |||||||||| ||||| |||||||| |||| ||||||||    
T  9068858 gatcggggttcgaaccccggtacctcca-ttagtgtgtgtgagtttataatgactttgtcatttcgtctat 9068927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 9599313 - 9599423
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    ||||| |||||| |||||||||||||||||| |||||| ||  |||||||     |||||||||| ||  | | ||||||||||||||||||||||  ||    
T  9599313 cataattcctagctcaactgacaaaaatgtcgaaattgttaaaccagacgtcttgatcggggttcaaactctggtacctccactttgtgtgtgtgagctt 9599412  T
Q  227 atgatgacttt 237  Q
    |||||||||||    
T  9599413 atgatgacttt 9599423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 35362914 - 35362960
Alignment:
Q  205 tccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||||||||||||||||||||||||||||||   |||||||||||    
T  35362914 tccactttgtgtgtgtgaatttatgatgactttgctatctcgtctat 35362960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 11408370 - 11408499
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaattgatagccaga-cg-----atcggggttcgaatcccgatacctccactttgtgtgtgtga 222  Q
    |||||||||||||||| ||||||  ||||||||||||||||| |||   || ||     ||||| |||||||||||  ||||| ||||||||||||||||    
T  11408370 gtcccataagtcctagctcaactagcaaaaatgtcaaaattgttagatcgaacgtcataatcggagttcgaatcccagtaccttcactttgtgtgtgtga 11408469  T
Q  223 atttatgatgactttatcatctcgtctatc 252  Q
     |||||||||  |||  | |||||||||||    
T  11408470 gtttatgatggttttgccttctcgtctatc 11408499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 32466631 - 32466696
Alignment:
Q  188 gttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||| |||| |||| || ||||||    
T  32466631 gttcgaaccccgatacctccacttatgtgtgtgtgaatttataatggctttgtcatttcatctatc 32466696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1833389 - 1833322
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  1833389 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 1833322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4430011 - 4429944
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| || |||||||||||||| || ||||||||| ||||| || |||||||||| |||||||||    
T  4430011 cggggttcaaaccccgatacctccac-ttatgtgtgtgagtttataataactttatcatttcgtctatc 4429944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 10083999 - 10083931
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||  ||| || ||||||||||||||||| | ||||||||||||||  | |||||||||||    
T  10083999 cggggttcgaactccggtagctccactttgtgtgtgtaagtttatgatgactttgccctctcgtctatc 10083931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 10165587 - 10165642
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||||||||    
T  10165587 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgacttt 10165642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 10393572 - 10393505
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  10393572 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 10393505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 14126961 - 14127028
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| ||||||||| || ||||| ||| |||| |||| |||||||||    
T  14126961 cggggttcgaatcccggtacctccac-ttgtgtgtgcgagtttataatggctttgtcatttcgtctatc 14127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 18990604 - 18990537
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| ||||||| || || |||||| |||||| ||||| ||||||||||||| |||||||||    
T  18990604 cggggttcgaaccccgatatctaca-tttgtgcgtgtgagtttataatgactttatcatttcgtctatc 18990537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36246064 - 36245997
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  36246064 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgacatttcgtctatc 36245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 40318855 - 40318788
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  40318855 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 40318788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 41408685 - 41408752
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| | | ||||| ||| |||||||||    
T  41408685 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataacggctttaccatttcgtctatc 41408752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 41071117 - 41071187
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| ||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  41071117 gatcggagttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 41071187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 972662 - 972597
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| |||| |||||| |||| |||||||||| ||||| |||||||| |||| |||||||||    
T  972662 gggttcgaaccccggtacctctactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 972597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 39916518 - 39916587
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||||||   |||  ||||||||| |||||||||| ||||| ||||||||||||| ||||||||    
T  39916518 gatcggggttcgaacgtcgacgcctccactt-gtgtgtgtgagtttataatgactttatcatttcgtctat 39916587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 1271158 - 1271223
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||| ||||||||| ||| | ||||||| ||||||||   ||| ||||||||||||||    
T  1271158 ggttcgaatcccaatacctccattttatatgtgtgagtttatgattgttttgtcatctcgtctatc 1271223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 24638038 - 24638079
Alignment:
Q  211 ttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  24638038 ttgtgtgtgtgagtttataatgactttatcatttcgtctatc 24638079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 38975813 - 38975741
Alignment:
Q  179 acgatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| |||||||||||  ||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  38975813 acgaccggggttcgaactccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 38975741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 4165017 - 4165084
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4165017 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4165084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 10011525 - 10011597
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| |||||||  ||| ||||||||||| ||| ||||||||||||| ||| |||| |||| |||||||||    
T  10011525 gatcggagttcgaactccggtacctccacttatgtatgtgtgaatttataatggctttgtcatttcgtctatc 10011597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 16496658 - 16496725
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  16496658 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 16496725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 17869194 - 17869127
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| || ||||||||||||||| ||| ||||  ||| |||||||||    
T  17869194 cggggttcgaaccccggtacctccac-ttatgtgtgtgaatttataatggctttgccatttcgtctatc 17869127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 20695553 - 20695486
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| ||| |||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  20695553 cggggttcgaacccctatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 20695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 23074714 - 23074647
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  23074714 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 23074647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 24051461 - 24051528
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| || | ||||||||| |||||| ||||| ||||| |||||||| |||| |||||||||    
T  24051461 cggggttcgaaccctggtacctccac-ttgtgtatgtgagtttataatgactttgtcatttcgtctatc 24051528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26802392 - 26802459
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  26802392 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 26802459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26809942 - 26810009
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  26809942 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 26810009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26824969 - 26825036
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  26824969 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 26825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 34930283 - 34930350
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  34930283 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34930350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36136932 - 36136865
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| || | ||| |||| |||||||||    
T  36136932 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataataattttgtcatttcgtctatc 36136865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36569337 - 36569404
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  36569337 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 36569404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36790385 - 36790318
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  36790385 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 36790318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36854228 - 36854161
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  36854228 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 36854161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 39150996 - 39150929
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  39150996 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgacatttcgtctatc 39150929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 42448269 - 42448336
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  42448269 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 42448336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 42645538 - 42645466
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| | || ||||||||||| ||| ||||||| ||||| ||| |||| |||| |||||||||    
T  42645538 gatcggggttcgaacctcggtacctccacttatgtatgtgtgagtttataatggctttgtcatttcgtctatc 42645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 39417500 - 39417568
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||  |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  39417500 cggggttcgaactccgatatctccactttatgtgtgtgagtttatgatgactttatcatctcgtctatc 39417568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 37103322 - 37103433
Alignment:
Q  132 ccataagtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagac-----gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatt 225  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| || |||     || ||||||| ||| ||||||||||||  ||||||||||||||||    
T  37103322 ccataagtcctagctcaactgacaaaaatgtcgaaattgttagaccggacatcatgaccggggtttgaaccccgatacctccgttttgtgtgtgtgaatt 37103421  T
Q  226 tatgatgacttt 237  Q
    ||||||||||||    
T  37103422 tatgatgacttt 37103433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 22999072 - 22999201
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtga 222  Q
    |||||||||||||||| ||||| |  ||||||| |||||||| ||| || ||||     | ||||||||||| ||||| |||||||||||||||||||||    
T  22999072 gtcccataagtcctagctcaacgggtaaaaatgccaaaattgttagtccggacgtcatgaccggggttcgaaccccgacacctccactttgtgtgtgtga 22999171  T
Q  223 atttatgatgactttatcatctcgtctatc 252  Q
     |||||||||  ||| ||||||||||||||    
T  22999172 gtttatgatggttttgtcatctcgtctatc 22999201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 18741451 - 18741400
Alignment:
Q  201 tacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18741451 tacctccactttgtgtgtgtgagtttatgatgactttgtcatctcgtctatc 18741400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 22382406 - 22382335
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||  ||| ||||||||||||||    
T  22382406 gatcggggttcgaaccccgacacctccactttgtgtatgtgagtttatgatggttttgtcatctcgtctatc 22382335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 22914432 - 22914361
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||  ||| ||||||||||||||    
T  22914432 gatcggggttcgaaccccgacacctccactttgtgtatgtgagtttatgatggttttgtcatctcgtctatc 22914361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 25219913 - 25219846
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||  |||||| || ||||||||    
T  25219913 cggggttcaaatcccgatacctccactttatgtgtgtgaatttatgatagctttattatgtcgtctat 25219846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 5618450 - 5618520
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| |||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||||||| ||||    
T  5618450 gatcggagttcgaatcc-gatacctcgactttgtgtgcgtgagtttatgatgactttgtcatctcgtttatc 5618520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 8293628 - 8293558
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||| ||| |||| |||| |||||||||    
T  8293628 gatcgaggttcgaatcccgatacctccac-ttatgtgtgtgaatttataatggctttgtcatttcgtctatc 8293558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 18055859 - 18055984
Alignment:
Q  132 ccataagtcctaggtcaactgacaaaaatgtcaaaattgatagccag------acgatcggggttcgaatcccgatacctccactttgtgtgtgtgaatt 225  Q
    ||||||||||||| |||| || ||||||||||||||||| ||| | |      | |||||||||||||| | || |||||||| ||||||||||||| ||    
T  18055859 ccataagtcctagctcaattggcaaaaatgtcaaaattgctaggccggatgtcatgatcggggttcgaaccgcgttacctcca-tttgtgtgtgtgagtt 18055957  T
Q  226 tatgatgactttatcatctcgtctatc 252  Q
    ||| |||||||| |||| |||||||||    
T  18055958 tataatgactttgtcatttcgtctatc 18055984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 19954971 - 19954903
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||| ||||||| ||||||||||| |||||||||||| |  |||||||||||||| |||||||||||||    
T  19954971 gatcggagttcgaaccccgatacctctactttgtgtgtgag--tttatgatgactttgtcatctcgtctat 19954903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 32517885 - 32517835
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||    
T  32517885 ggttcgaaccccggtacctccactttgtgtgtgtgagtttatgatgacttt 32517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 9993167 - 9993295
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaattgata-gccagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtga 222  Q
    |||||||||||  ||| |||||||||||||||||| |||||| || ||| ||||     ||||||||||||| |||  |||||| ||||||||  |||||    
T  9993167 gtcccataagttatagctcaactgacaaaaatgtcgaaattgttaagccggacgtcataatcggggttcgaaccccagtacctcaactttgtgcatgtga 9993266  T
Q  223 atttatgatgactttatcatctcgtctat 251  Q
     |||| ||||||||| |||| ||||||||    
T  9993267 gtttacgatgactttgtcatttcgtctat 9993295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 17052615 - 17052683
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| ||  ||| |||||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  17052615 cggggttcaaactccggtacctccactttgtgtgtgtgaatttatgatggctttgccatctcttctatc 17052683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 38463194 - 38463249
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||| ||| ||||    
T  38463194 gatcggggttcgaaccccgatacctccac-ttgtgtgtgtgaatttataatggcttt 38463249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 43461404 - 43461337
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  43461404 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 43461337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 36685476 - 36685406
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| || ||||||||||| |||||||||||| ||||| || ||||| |||| |||||||||    
T  36685476 gatcggggttcgaaccctgatacctccac-ttgtgtgtgtgagtttataataactttgtcatttcgtctatc 36685406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 8859356 - 8859291
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||||||| |||||||||||||| |||||||||| | ||||| |||||||| |||| ||||||||    
T  8859356 ggggttcgaaccccgatacctccac-ttgtgtgtgtcagtttataatgactttgtcatttcgtctat 8859291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 43841785 - 43841716
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||| |||||||  ||||||||||||||| |||||||||| ||||| |||||||| |||| ||||||||    
T  43841785 gatcggagttcgaactccgatacctccactt-gtgtgtgtgagtttataatgactttctcatttcgtctat 43841716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 637041 - 637090
Alignment:
Q  203 cctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||||||| |||||||||| |||  |||||||||||||    
T  637041 cctccactttgtgtgtgtgagtttatgatgattttgccatctcgtctatc 637090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 816407 - 816472
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| |||| ||| |||||||||||||||||| |||||||||  |||  |||||||||||||    
T  816407 ggttcgaaccccggtacatccactttgtgtgtgtgagtttatgatggttttgccatctcgtctatc 816472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 19967795 - 19967859
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| ||||||||||||| ||| |||||||| ||||| |||||||| |||| |||||||||    
T  19967795 ggttcgaattccgatacctccac-ttgcgtgtgtgagtttataatgactttgtcatttcgtctatc 19967859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 12236179 - 12236246
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||| ||| ||||  ||| |||||||||    
T  12236179 cggggttcgaaccccggtacctccactt-gtgtgtgtgaatttataatggctttgccatttcgtctatc 12236246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 21840522 - 21840467
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||| ||| ||||    
T  21840522 gatcggggttcgaatcccgatacctccac-ttgtgtgggtgagtttataatggcttt 21840467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 23497582 - 23497515
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  23497582 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 23497515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 33898289 - 33898351
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtc 248  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||    
T  33898289 cggggttcgaatcccg-tacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtc 33898351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 45049443 - 45049510
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  45049443 cggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 45049510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 3048597 - 3048667
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| || ||||||||| ||| | ||| ||||||||| |||||||||    
T  3048597 gatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtttttaatggctttatcatttcgtctatc 3048667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 13491084 - 13491151
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||| | | ||||||||||||||||||||||| |||||| || ||||  |||||| |||||    
T  13491084 cggggttcgaacctcaatacctccactttgtgtgtgtgagtttatggtggctttgccatctcttctat 13491151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 16010686 - 16010616
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| |||||| |||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  16010686 gatcggggttcgaaccccggtacctcaactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 16010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 20251558 - 20251488
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  20251558 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 20251488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 33607102 - 33607168
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  33607102 ggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 33607168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 43035495 - 43035565
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| |||||| |||| |||||||||| ||||| ||| ||||| ||| |||||||||    
T  43035495 gatcggggttcgaaccccggtacctctactt-gtgtgtgtgagtttataatggctttaccatttcgtctatc 43035565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 8532164 - 8532216
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||||||||    
T  8532164 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgacttt 8532216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 40710905 - 40710852
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||||||| |||| |||||||||||||||| ||||  ||||||||| ||||    
T  40710905 cggggttcgaaccccggtacctccactttgtgtttgtgtgtttatgatggcttt 40710852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4014883 - 4014816
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4014883 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4014816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 12400699 - 12400766
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||||||||| ||||||| ||||   |||||||||  |||  ||||||||||||| ||||||||    
T  12400699 gatcggggttcgaatcctgataccttcact---tgtgtgtgagcttacaatgactttatcatttcgtctat 12400766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 13268045 - 13267978
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  13268045 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 13267978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 15897272 - 15897339
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  15897272 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgcctttgccatttcgtctatc 15897339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 18999391 - 18999454
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||| | ||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  18999391 gttcgaaccccggttcctccactt-gtgtgtgtgagtttattatgactttgtcatttcgtctatc 18999454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 25994692 - 25994656
Alignment:
Q  216 tgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  25994692 tgtgtgagtttatgatgactttatcatctcgtttatc 25994656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 35476560 - 35476493
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  35476560 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 35476493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36216823 - 36216756
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  36216823 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 36216756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36754811 - 36754744
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  36754811 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 36754744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36755006 - 36755073
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  36755006 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 36755073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 39070077 - 39070144
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  39070077 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 39070144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 39218736 - 39218807
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtga-atttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||| |||||||  ||||| |||||||| |||| |||||||||    
T  39218736 gatcggggttcgaaccccggtacctccac-ttgtatgtgtgagttttataatgactttgtcatttcgtctatc 39218807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 40630300 - 40630260
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaatt 169  Q
    |||||||||||| ||| ||||| ||||||||||||||||||    
T  40630300 gtcccataagtcttagttcaaccgacaaaaatgtcaaaatt 40630260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 41520553 - 41520604
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatga 233  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| ||||| ||||    
T  41520553 gatcggggtttgaatcccgatacctcca-tttgtgtgtatgagtttataatga 41520604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 8793245 - 8793184
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctc 245  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  8793245 cggggttcgaaccccggtacctccactttgtgtgtgtgagtttatgatgactttaccatctc 8793184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 26261366 - 26261296
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||| ||| |||| ||||||||||||||    
T  26261366 gatcggggttcgaatcccggtacctccac-ttgtgtgtgtaaatttataatgtctttgtcatctcgtctatc 26261296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 42631058 - 42630988
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||| |||| |||||||||    
T  42631058 gatcggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatgactttgtcatttcgtctatc 42630988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 27856052 - 27856122
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||| ||| ||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  27856052 gatcggggttcgaatcccggtacttccactt-gtgtgtgtgagtttataatgactttttcatttcgtctatc 27856122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 35068929 - 35069000
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||| ||||||||| || ||||||||||||||||||||||| ||||||| | ||||  |||||||||||||    
T  35068929 gatcgaggttcgaattccaatacctccactttgtgtgtgtgagtttatgacggctttgccatctcgtctatc 35069000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 45788678 - 45788748
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||||||||||||| || ||||||||| ||||| ||| ||||||||| |||||||||    
T  45788678 gatcggggttcgaaccccgatacctccac-ttctgtgtgtgagtttataatggctttatcatttcgtctatc 45788748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 32210621 - 32210560
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtc 248  Q
    |||| ||| ||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  32210621 ggtttgaaccccgacacctccactttgtgtgtgtgagtttatgatgtctttatcatttcgtc 32210560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 44836249 - 44836120
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaattgatagc-cagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtga 222  Q
    ||||||||||||||||  |||||| ||||||| ||||||||| |||  | ||||     ||||||||||||| |||| || ||||||||| | |||||||    
T  44836249 gtcccataagtcctagcacaactggcaaaaatatcaaaattgttaggtcggacgtcatgatcggggttcgaaccccggtatctccactttatatgtgtga 44836150  T
Q  223 atttatgatgactttatcatctcgtctatc 252  Q
     ||||||||| |||| ||||||| ||||||    
T  44836149 gtttatgatggctttgtcatctcatctatc 44836120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 49632616 - 49632680
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| |||||||||||||||| |||||||||| ||||| |||| |||||||| |||||||||    
T  49632616 ggttcgaaccccgatacctccactt-gtgtgtgtgagtttataatgattttatcatttcgtctatc 49632680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 7204639 - 7204533
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaattgatagccagacgatc------ggggttcgaatcccgatacctccactttgtgtgtgtga 222  Q
    |||||||||||||||| ||||||| |||||||| | |||||| ||| | ||  |||      |||||||||| ||||||||||||||||||||| |||||    
T  7204639 gtcccataagtcctagctcaactggcaaaaatgccgaaattgttaggccgaacatcatgaccggggttcgaaccccgatacctccactttgtgtatgtga 7204540  T
Q  223 atttatg 229  Q
     ||||||    
T  7204539 gtttatg 7204533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 12176555 - 12176622
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| ||||||| |||||||||||| |||||||||| |||||||| ||||  |||||| ||||||    
T  12176555 ggggttcaaatcccggtacctccactttatgtgtgtgaaattatgatggctttgccatctcatctatc 12176622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 12502759 - 12502826
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||  ||| |||||| ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  12502759 ggggttcgaactccggtacctcaactttgtgtgtgtgagtttatgatggctttaccatctcctctatc 12502826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 43086544 - 43086474
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| |||| |||| |||||||||    
T  43086544 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 43086474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 47429665 - 47429595
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||| ||||||||| || ||||||||| ||||| ||| |||| |||| |||||||||    
T  47429665 gatcggggttcgaatcccggtacctccac-ttatgtgtgtgagtttataatggctttgtcatttcgtctatc 47429595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 49773520 - 49773457
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||| ||||||||||| ||||||||||||| | |||||||| ||||| |||| ||||||||    
T  49773520 gttcgaaccccgatacctctactttgtgtgtgtaagtttatgataactttgtcatatcgtctat 49773457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 37315106 - 37315056
Alignment:
Q  202 acctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||||| ||| || ||||||| ||||||||||||||    
T  37315106 acctccactttgtgtgtgtgagtttgtgttgactttgtcatctcgtctatc 37315056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 11081031 - 11080963
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| || ||||||||||||||||| ||||| ||| | |||||||  ||| ||||||||||||||    
T  11081031 cggggttcaaaccccgatacctccactttatgtgtatgagtatatgatggttttgtcatctcgtctatc 11080963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 25083195 - 25083123
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||||| |||||||| || ||||| ||| |||| |||| |||||||||    
T  25083195 gatcggggttcgaaccccggtacctccacttgtgtgtgtgagagtttataatggctttgtcatttcgtctatc 25083123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 39606463 - 39606530
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  39606463 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 39606530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 40958644 - 40958577
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  40958644 cggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 40958577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 48314225 - 48314292
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||| ||| ||||| ||| | |||||||    
T  48314225 cggggttcgaaccccggtacctccactt-gtgtgtgtgaatttataatggctttaccattttgtctatc 48314292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 50905496 - 50905560
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| | || |||||| ||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  50905496 gttcgaacctcggtacctctactttgtgtgtgtgagtttataatgactttgtcatctcgtttatc 50905560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 8312655 - 8312553
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatagccagac------gatcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    |||||||||||| ||||| |||||||||||| |||||| ||| | ||       ||||| |||||||| |||| ||||||||||||||||| |||| |||    
T  8312655 cataagtcctagttcaacggacaaaaatgtcgaaattgttaggccgaacgttatgatcgaggttcgaaccccggtacctccactttgtgtgagtgagttt 8312556  T
Q  227 atg 229  Q
    |||    
T  8312555 atg 8312553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 24254483 - 24254414
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||  ||| ||||||| |||||||||| ||||| ||||||||||||| |||||||||    
T  24254483 gatcggggttcgaaccccagtac-tccactt-gtgtgtgtgagtttataatgactttatcatttcgtctatc 24254414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 27227138 - 27227209
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||  || ||||||||| ||||| ||| |||| |||||||||  |||||||||||||    
T  27227138 gatcggggttcgaacccctgtaactccactttatgtgtatgagtttaggatgactttgccatctcgtctatc 27227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 36586306 - 36586376
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| |||| |||| || ||||||    
T  36586306 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcatctatc 36586376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 37186870 - 37186819
Alignment:
Q  201 tacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||||| ||| ||||||||| |||| ||||||| ||||||    
T  37186870 tacctccactttgtgtgtttgagtttatgatggctttgtcatctcttctatc 37186819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 41651128 - 41651199
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||| ||||| || ||| ||||||||| ||||| |||  ||| |||| |||||||||    
T  41651128 gatcggggttcgaatcccggtaccttcattttatgtgtgtgagtttataatggttttgtcatttcgtctatc 41651199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 50145197 - 50145135
Alignment:
Q  189 ttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| |||||||||| ||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  50145197 ttcgaaccccgataccttcactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 50145135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 236575 - 236694
Alignment:
Q  137 agtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatga 230  Q
    |||||||  |||||||||||||||||| |||||| ||| || ||||     | ||||||||||| |||| ||||| |||||| |||||| |  |||||||    
T  236575 agtcctacctcaactgacaaaaatgtcgaaattgttaggccggacgtcatgaccggggttcgaaccccggtaccttcactttatgtgtgag--tttatga 236672  T
Q  231 tgactttatcatctcgtctatc 252  Q
    ||||||| |||||| |||||||    
T  236673 tgactttgtcatcttgtctatc 236694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 13116987 - 13117037
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||||  ||| ||||| |||||||||||||||| ||||||||||||||    
T  13116987 ggttcgaactccggtaccttcactttgtgtgtgtgagtttatgatgacttt 13117037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 16867440 - 16867402
Alignment:
Q  214 tgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  16867440 tgtgtgtgagtttatgatgactttgtcatctcgtctatc 16867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 32947621 - 32947726
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatagccaga------cgatcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| | ||       || ||| ||||||| ||||| | ||||||||| ||||||||| |||    
T  32947621 cataagtcctagctcaactgacaaaaatgttaaaattgttaggccgaacgtcttgaccggagttcgaaccccgacatctccactttatgtgtgtgagttt 32947720  T
Q  227 atgatg 232  Q
    ||||||    
T  32947721 atgatg 32947726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 2208960 - 2208900
Alignment:
Q  189 ttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||||||   ||| ||||| ||||| |||||||| |||| |||||||||    
T  2208960 ttcgaatcccgatacctccact---tgtatgtgagtttataatgactttgtcatttcgtctatc 2208900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 15331129 - 15331065
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| |||| ||||||||| |||||| ||||| ||||| |||||||| |||| |||||||||    
T  15331129 ggttcgaaccccggtacctccac-ttgtgtatgtgagtttataatgactttgtcatttcgtctatc 15331065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 50248090 - 50248154
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  50248090 ggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 50248154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 52492725 - 52492684
Alignment:
Q  211 ttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  52492725 ttgtgtgtgtgagtttataatgactttatcatttcgtctatc 52492684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 5598363 - 5598426
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  5598363 gttcgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 5598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 13979785 - 13979745
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaattta 227  Q
    |||||||||||| | ||||||||||||||||||||| ||||    
T  13979785 ggttcgaatcccaacacctccactttgtgtgtgtgagttta 13979745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 17068210 - 17068277
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| |||  ||| |||| |||||||||    
T  17068210 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggttttgtcatttcgtctatc 17068277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 17540146 - 17540099
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatg 232  Q
    ||||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  17540146 cggggttcgaaccccgatacctcaactttgtgtgcgtg-atttatgatg 17540099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 19338248 - 19338181
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  19338248 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 19338181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 20164143 - 20164076
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  20164143 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 20164076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 22332212 - 22332284
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| |||||||||  | ||||||||||| ||||||||| | ||||  ||||||||||||| |||||||||    
T  22332212 gatcggagttcgaatcatggtacctccacttatgtgtgtgtaagtttacaatgactttatcatttcgtctatc 22332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 35758333 - 35758400
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| || ||||||||| ||||| ||| ||||| ||| |||||||||    
T  35758333 cggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttaccatttcgtctatc 35758400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 48731826 - 48731759
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| |||||| |||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  48731826 cggggttcgaaccccggtacctctactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 48731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 49948299 - 49948366
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| |||||| |||  ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  49948299 cgggattcgaaccccagtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 49948366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 54923544 - 54923612
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||  ||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  54923544 cggggttcgaactccgatacttccattttgtgtgtgtgaatttatgatgattttgtcatctcgtctatc 54923612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 4659593 - 4659664
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| ||||||| || |||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||    
T  4659593 gatcggtgttcgaaccctgatacctccactttatgtgtgtgagtttataatgactttttcatctcgtctatc 4659664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 37278609 - 37278538
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||   |||||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  37278609 gatcggggttcaaatcctagtacctccactttgtatgtgtgagtttatgatgactttgtcatctcgtctatc 37278538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 10511284 - 10511349
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||    
T  10511284 gggttcgaa-cccgatacctccactttgcgtgtgtgaatttatgatggctttatcaacccgtctatc 10511349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 7131621 - 7131505
Alignment:
Q  132 ccataagtcctaggtcaactgacaaaaatgtcaaaattgatagccagacgatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgat 231  Q
    ||||||||| ||| | |||||||||||||  |||||||| ||| |    || |||||||||||   ||||||||||||||||||||||||| ||||||||    
T  7131621 ccataagtcttagcttaactgacaaaaataccaaaattgttaggc----gaccggggttcgaacttcgatacctccactttgtgtgtgtgagtttatgat 7131526  T
Q  232 gactttatcatctcgtctatc 252  Q
    | ||||  |||||| ||||||    
T  7131525 ggctttgccatctcttctatc 7131505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 32597417 - 32597348
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||| ||| ||||| ||| |||||||||    
T  32597417 cggggttcgaatcccggtacctccacttgtgtgtgtgtgagtttataatggctttaccatttcgtctatc 32597348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 10662041 - 10662108
Alignment:
Q  183 tcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||||||||| |||||||||||||||||  |||||||| |||||||| ||||| ||| |||||||||    
T  10662041 tcggggttcgaa-cccgatacctccactttacgtgtgtgagtttatgataactttgtcaactcgtctat 10662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 8526165 - 8526102
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatct 244  Q
    |||||||||||||||| || ||| | || ||||||||||||| ||||||||| |||||||||||    
T  8526165 gatcggggttcgaatcacggtactttcattttgtgtgtgtgagtttatgatggctttatcatct 8526102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 9174660 - 9174605
Alignment:
Q  196 cccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||||||||| |||||||||||||||||||  |||| |||||| |||||    
T  9174660 cccgatacctccactttatgtgtgtgaatttatgatggttttaccatctcttctat 9174605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 21129101 - 21129172
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| |||||| ||||||||| ||||| ||||||||| ||||  ||||| |||||||    
T  21129101 gatcggggttcgaaccccggtacctctactttgtgtttgtgagtttatgatggctttgccatcttgtctatc 21129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 27845184 - 27845117
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| || ||||||| ||||| ||||||||| ||||| |||  ||||||||||||||||||    
T  27845184 ggggttcgaattccaatacctcaactttatgtgtgtgagtttataatggttttatcatctcgtctatc 27845117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 28731902 - 28731972
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| ||||  |||||||| |||| |||||||||    
T  28731902 gatcggggttcgaatcccggtaccttcac-ttgtgtgtgtgagtttacaatgactttgtcatttcgtctatc 28731972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 40559729 - 40559799
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||  ||||||||||||| |||||||||||| ||||| ||| |||| |||| |||||||||    
T  40559729 gatcggggttcgaactccgatacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 40559799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 35359777 - 35359842
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  35359777 gggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 35359842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 39948601 - 39948651
Alignment:
Q  202 acctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| ||||| ||||||| |||||||||||||| ||||||||||||||    
T  39948601 acctccattttgtatgtgtgagtttatgatgactttgtcatctcgtctatc 39948651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 11076463 - 11076530
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  11076463 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 11076530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 34397738 - 34397805
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  34397738 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34397805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 38417791 - 38417727
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| ||||||||| | ||||| ||||||||| ||||| |||| ||| ||||||||||||||    
T  38417791 gttcgaaccccgatacccctactttatgtgtgtgagtttataatgattttgtcatctcgtctatc 38417727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 52256822 - 52256755
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  52256822 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgccatttcgtctatc 52256755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 1242272 - 1242342
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  1242272 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 1242342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 8128363 - 8128293
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  8128363 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8128293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 12088355 - 12088285
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| |||  ||| |||| |||||||||    
T  12088355 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggatttgtcatttcgtctatc 12088285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 24910361 - 24910291
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  24910361 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 24910291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 10071640 - 10071606
Alignment:
Q  136 aagtcctaggtcaactgacaaaaatgtcaaaattg 170  Q
    ||||||||| |||||||||||||||||||||||||    
T  10071640 aagtcctagctcaactgacaaaaatgtcaaaattg 10071606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 25118774 - 25118709
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| |||| ||||||||| | |||||||||||||||| |||| ||| |||| |||||||||    
T  25118774 gggttcgaaccccggtacctccacct-gtgtgtgtgaatttataatgattttgtcatttcgtctatc 25118709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 2096655 - 2096586
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| ||||||||||| ||||| ||| ||||  ||| |||||||||    
T  2096655 cggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatggctttgccatttcgtctatc 2096586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 29212135 - 29212066
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| ||||||||||| ||||| ||| ||||  ||| |||||||||    
T  29212135 cggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatggctttgccatttcgtctatc 29212066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 32635434 - 32635494
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcat 242  Q
    |||||||||||||| |||| ||||||||| ||||||||| || ||||| |||||||| ||||    
T  32635434 gatcggggttcgaaccccggtacctccac-ttgtgtgtgcgagtttataatgactttgtcat 32635494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 35069371 - 35069440
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| ||||||||||| ||||| ||| |||| |||| || ||||||    
T  35069371 cggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatggctttgtcatttcatctatc 35069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 50735879 - 50735932
Alignment:
Q  198 cgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||| ||| ||||||| | |||| ||||||||| |||||||||||||    
T  50735879 cgatacctccattttatgtgtgtaagtttacgatgactttgtcatctcgtctat 50735932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 50776976 - 50776923
Alignment:
Q  198 cgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||| ||| ||||||| | |||| ||||||||| |||||||||||||    
T  50776976 cgatacctccattttatgtgtgtaagtttacgatgactttgtcatctcgtctat 50776923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 3440784 - 3440851
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  3440784 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 3440851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 3917824 - 3917891
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  3917824 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 3917891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4232247 - 4232180
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4232247 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4232180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 5998852 - 5998785
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  5998852 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 5998785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7552653 - 7552720
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| ||| |||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  7552653 cggggttcgaaccccaatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 7552720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 8381137 - 8381204
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  8381137 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8381204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 9583493 - 9583426
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  9583493 cggggttagaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 9583426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 10229015 - 10229082
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  10229015 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 10229082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 13525227 - 13525294
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  13525227 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 13525294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 32591027 - 32591082
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||||||||||||||| ||||||||| |||||||||| | ||||| ||| ||||    
T  32591027 gatcggggttcgaatcccggtacctccac-ttgtgtgtgtcagtttataatggcttt 32591082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 32961048 - 32960981
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  32961048 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 32960981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 42296769 - 42296836
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| ||||||||| |||||||| ||| ||||  ||| |||||||||    
T  42296769 cggggttcgaaccccggtacctccac-ttgtgtgtgagaatttataatggctttgccatttcgtctatc 42296836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 48555894 - 48555961
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  48555894 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 48555961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 32778553 - 32778624
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||  |||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  32778553 gatcggggtttgaactccgatacctccactttgtgtgtgtgggtttatgatggctttgtcatctcgtctatc 32778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 28183781 - 28183714
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||| ||| ||||||||| || |||||    
T  28183781 cggggttcgaaccccgacacctccactttgtgtgtgtgagtttataatggctttatcatttcttctat 28183714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 12320988 - 12321093
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatagccag------acgatcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    |||||||||||| ||||||||||||||||||||||||| ||| | |      |||| | | ||||||| ||||||||||| |||||||| |||||| |||    
T  12320988 cataagtcctagctcaactgacaaaaatgtcaaaattgttaggccgaacgtcacgaccagagttcgaaccccgatacctctactttgtgcgtgtgagttt 12321087  T
Q  227 atgatg 232  Q
    ||||||    
T  12321088 atgatg 12321093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 40216835 - 40216896
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcat 242  Q
    ||||||||||||||||| |  ||||||||||||||||||||| ||||||||| |||| ||||    
T  40216835 gatcggggttcgaatcctggcacctccactttgtgtgtgtgagtttatgatggctttgtcat 40216896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 20662580 - 20662647
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||| ||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  20662580 cggggttcgaatgccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 20662647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26738029 - 26738096
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||| ||| ||||| ||| |||||||||    
T  26738029 cggggttcgaaccccggtacctccactt-gtgtgtgtgaatttataatggctttaccatttcgtctatc 26738096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 37817434 - 37817501
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| |||| |||| |||||||||    
T  37817434 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 37817501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 33128238 - 33128167
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| |||||||||||||||| ||||| ||||| |||  ||| ||||||| ||||||    
T  33128238 gatcggggttcgaaccccggtacctccactttgtgtatgtgagtttattatgcatttgtcatctcatctatc 33128167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 7772123 - 7772055
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtcta 250  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||||||||  ||| |||||||    
T  7772123 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgactttgccatttcgtcta 7772055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 24242655 - 24242586
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| ||||||||| | |||| ||||||||| |||| |||||||||    
T  24242655 cggggttcgaaccccggtacctccacttgtgtgtgtgtcagtttacgatgactttgtcatttcgtctatc 24242586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 10926156 - 10926089
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| ||||||||||  |||||||| ||| ||||||||||||||| ||| ||||||||| |||||||||    
T  10926156 cgggattcgaatcccagtacctcca-tttatgtgtgtgaatttataatggctttatcatttcgtctatc 10926089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 11021399 - 11021443
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatg 232  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||    
T  11021399 gttcgaaccccggtacctccactttgtgtgtgtgagtttatgatg 11021443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 16395431 - 16395498
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| |||||||| ||||||||||||| ||||| ||||||||  ||| |||||||||    
T  16395431 cggggttcgaaccccggtacctcca-tttgtgtgtgtgagtttataatgactttgccatttcgtctatc 16395498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 37295184 - 37295251
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  37295184 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 37295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 37820948 - 37820896
Alignment:
Q  200 atacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||||||| |||||||||  ||| ||||||| ||||||    
T  37820948 atacctccactttgtgtgtgtgagtttatgatggttttgtcatctcttctatc 37820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 40418190 - 40418234
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatg 232  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||    
T  40418190 gttcgaaccccgatacctccactttatgtgtgtgagtttatgatg 40418234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 5895868 - 5895798
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||| |||| || |||||||||| ||||| ||||||||| ||| |||||||||    
T  5895868 gatcggggttcgaaccccggtacatccaatt-gtgtgtgtgagtttataatgactttaccatttcgtctatc 5895798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 24197885 - 24197830
Alignment:
Q  197 ccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| |||||||||  ||| ||||||| ||||||    
T  24197885 ccgatacctccactttatgtgtgtgagtttatgatggttttgtcatctcttctatc 24197830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 24241971 - 24241901
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| |||||||  ||| || |||||||| |||||||||||||||| |||||||| |||| |||||||||    
T  24241971 gatcggagttcgaactccggtatctccactt-gtgtgtgtgaatttataatgactttgtcatttcgtctatc 24241901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 30779712 - 30779759
Alignment:
Q  189 ttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactt 236  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||    
T  30779712 ttcgaaccccgatacctccactttgtgtgtttgagtttatgataactt 30779759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 34540137 - 34540067
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||||||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  34540137 gatcggggtttgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34540067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 14188150 - 14188215
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  14188150 gggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgccatttcgtctatc 14188215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 2527261 - 2527325
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||| ||||||||||   | ||||||| ||||| ||||||||| ||| |||||||||    
T  2527261 ggggttcgaatcccggtacctccact---tatgtgtgagtttataatgactttaccatttcgtctatc 2527325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 5700719 - 5700650
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||  ||||||||||| ||||||||||| ||||| ||||||||  ||| |||||||||    
T  5700719 cggggttcgaaccccagtacctccacttatgtgtgtgtgagtttataatgactttgccatttcgtctatc 5700650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 14344718 - 14344665
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttta 238  Q
    ||||||||||  |||  ||||||||||||||||||||| ||||||||| |||||    
T  14344718 ggggttcgaacaccgtcacctccactttgtgtgtgtgagtttatgatggcttta 14344665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4430805 - 4430738
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4430805 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4430738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4977104 - 4977037
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4977104 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4977037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 6317358 - 6317425
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  6317358 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 6317425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 10096670 - 10096737
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| || ||||||||| ||||| ||| ||||  ||| |||||||||    
T  10096670 cggggttcgaaccccgatacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 10096737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 15589319 - 15589258
Alignment:
Q  189 ttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| ||| ||||||||||||| |||||| |  |||||||||| ||| ||||||||||||||    
T  15589319 ttcgaacccctatacctccactttatgtgtgag--tttatgatgaatttgtcatctcgtctatc 15589258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 17919885 - 17919818
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| | || ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  17919885 cggggttcgaacctcggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 17919818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 19649568 - 19649501
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| || ||||||||| ||||| ||| |||| |||| |||||||||    
T  19649568 cggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgtcatttcgtctatc 19649501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 23681068 - 23681135
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  23681068 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 23681135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 25063398 - 25063465
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  25063398 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 25063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 27817519 - 27817452
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  27817519 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 27817452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 27849813 - 27849746
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  27849813 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 27849746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 27928216 - 27928283
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  27928216 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 27928283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 31941107 - 31941052
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||||||||| |||||||||||||| || ||||||||| ||||| ||| ||||    
T  31941107 gatcggggttcgaaccccgatacctccac-ttatgtgtgtgagtttataatggcttt 31941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 34711625 - 34711558
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  34711625 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34711558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36586540 - 36586607
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||| ||||||| ||||| ||| |||| |||| |||||||||    
T  36586540 cggggttcgaaccccggtacctccac-ttgtatgtgtgagtttataatggctttgtcatttcgtctatc 36586607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 37708517 - 37708450
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||| | ||||| ||| |||| |||| |||||||||    
T  37708517 cggggttcgaaccccggtacctccac-ttgtgtgtgtaagtttataatggctttgtcatttcgtctatc 37708450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 38953550 - 38953483
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  38953550 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 38953483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 41562497 - 41562545
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttat 228  Q
    |||||||||||||| |||| ||||||||||| ||||||||||| |||||    
T  41562497 gatcggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttat 41562545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 39580649 - 39580571
Alignment:
Q  156 aaaatgtcaaaattgatag-ccagacg-atcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatg 232  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||  |||||||||||| ||||||||| |||||||||    
T  39580649 aaaatgtcaaaattgttaggccagacgtatcggggttcgaatcccagtacctccactttatgtgtgtgattttatgatg 39580571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 8059900 - 8059971
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| |||||| ||||||| ||||||| ||| | |||||||| ||||||||||||||    
T  8059900 gatcggggttcgaaccccggtacctcaactttgtatgtgtgagtttgtcatgactttgtcatctcgtctatc 8059971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 22702449 - 22702512
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatct 244  Q
    |||||||| ||||| || ||||||||||||||||||| |||||||||||||| |||| ||||||    
T  22702449 gatcggggctcgaaccctgatacctccactttgtgtgcgtgaatttatgatggctttgtcatct 22702512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 45957407 - 45957336
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| ||||||||| |||| |||||||||||||||||||| | ||||||| |||||| ||||||| ||||||    
T  45957407 gatcagggttcgaaccccggtacctccactttgtgtgtgttagtttatgaagactttgtcatctcttctatc 45957336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 9506969 - 9506844
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagac-----gatcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    |||||||||||| | ||||||||||||| ||||||||| ||| || |||     || || ||||||||  ||| |||||||||||||||||||||| |||    
T  9506969 cataagtcctagcttaactgacaaaaatatcaaaattgttaggccggacatcatgaccgaggttcgaactccggtacctccactttgtgtgtgtgagttt 9506870  T
Q  227 atgatgactttatcatctcgtctatc 252  Q
    |||||| | ||| |||||| ||||||    
T  9506869 atgatggccttaccatctcttctatc 9506844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 2228150 - 2228083
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| |||| ||||||| ||||| |||||||| |||| |||||||||    
T  2228150 cggggttcgaatcccggtacctccac-ttgtatgtgtgagtttataatgactttgtcatttcgtctatc 2228083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 41708615 - 41708546
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| ||||||||||||||||  ||| ||||| ||||||||| ||||| |||||| ||||||    
T  41708615 gatcggggttcgaaccccgatacctccactt--tgtatgtgagtttatgatggctttaccatctcttctatc 41708546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 46021501 - 46021433
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| |||||||| ||||||||||||| ||||||||| ||||  |||||| ||||||    
T  46021501 cggggttcgaaccccggtacctccattttgtgtgtgtgagtttatgatggctttgccatctcttctatc 46021433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 6328242 - 6328183
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctc 245  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||  ||| |||||||    
T  6328242 gggttcgaaccccgatacctccactttatgtgtgtgagtttatgatggttttgtcatctc 6328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 12961897 - 12961826
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| ||||||| | || ||||| || ||||||||||||| |||||||||||||| ||||||| ||||||    
T  12961897 gatcggagttcgaacctcggtaccttcaatttgtgtgtgtgagtttatgatgactttgtcatctcttctatc 12961826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 29151638 - 29151708
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||| ||| |||||||||    
T  29151638 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttaccatttcgtctatc 29151708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 43188590 - 43188657
Alignment:
Q  186 gggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| ||| |||||||||||| ||||||||||| ||||| |||||||| |||| |||||||||    
T  43188590 gggttcgaaccccaatacctccacttgtgtgtgtgtgagtttataatgactttgtcatttcgtctatc 43188657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 47086428 - 47086303
Alignment:
Q  132 ccataagtcctaggtcaactgacaaaaatgtcaaaattgatagccag------acgatcggggttcgaatcccgatacctccactttgtgtgtgtgaatt 225  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| | |      | |||||||||||||| || | ||||||||| || ||||||||| ||    
T  47086428 ccataagtcctagctcaactgacaaaaatgtcgaaattgttaggccggatgccatgatcggggttcgaaccctgttacctccac-ttatgtgtgtgagtt 47086330  T
Q  226 tatgatgactttatcatctcgtctatc 252  Q
    ||| ||| ||||| ||| |||||||||    
T  47086329 tataatggctttaccatttcgtctatc 47086303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 44136183 - 44136129
Alignment:
Q  198 cgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||||||||| |||| ||||||||| | || |||||||||    
T  44136183 cgatacctccactttgtgtgtgtgagtttaagatgactttgtaatttcgtctatc 44136129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 7312523 - 7312456
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||| | | ||||| ||| |||||||||    
T  7312523 cggggttcgaaccccggtacctccactt-gtgtgtgtgaatttataacggctttaccatttcgtctatc 7312456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 9234313 - 9234250
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||| || |||||||| |||||||||| ||||| ||| ||||||||| |||||||||    
T  9234313 gttcgaatcccggtatctccactt-gtgtgtgtgagtttataatggctttatcatttcgtctatc 9234250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 10061086 - 10061019
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  10061086 cggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 10061019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 17895692 - 17895759
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  17895692 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 17895759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 45041803 - 45041736
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  45041803 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgccatttcgtctatc 45041736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 3861409 - 3861339
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  3861409 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 3861339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 4227389 - 4227459
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4227389 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4227459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 10422533 - 10422579
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttat 228  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  10422533 gatcggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttat 10422579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 29628457 - 29628387
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| |||||||||||||| ||||||||| |||||||||||| ||||  ||| |||| |||| |||||||||    
T  29628457 gatcagggttcgaatcccggtacctccac-ttgtgtgtgtgagtttaaaatggctttgtcatttcgtctatc 29628387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 30627679 - 30627749
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||| |||||||| |||| ||||||||||| |||||||||| ||||  |||||||| |||| |||||||||    
T  30627679 gatcgaggttcgaaccccggtacctccactt-gtgtgtgtgagtttacaatgactttgtcatttcgtctatc 30627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 46910981 - 46910910
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| | || |||||| ||||||||||| ||| ||||||||   ||| ||||||||||||||    
T  46910981 gatcggggttcgaacctcggtacctcaactttgtgtgtctgagtttatgatagatttgtcatctcgtctatc 46910910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 33512853 - 33512922
Alignment:
Q  182 atcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||| ||| |||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  33512853 atcggggtttgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 33512922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 2354863 - 2354798
Alignment:
Q  188 gttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||||||||||||||| ||||||||||| ||||| ||| ||||  ||| |||||||||    
T  2354863 gttcgaaccccgatacctccacttgtgtgtgtgtgagtttataatggctttgccatttcgtctatc 2354798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 12645365 - 12645300
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| |||  |||||||||||| ||||||||  |||||||||  ||| ||||||||||||||    
T  12645365 ggttcgaacccctgtacctccactttatgtgtgtgggtttatgatggttttgtcatctcgtctatc 12645300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 31300067 - 31299998
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| | || ||||||||||| ||||||||||| ||||| || ||||| |||| |||||||||    
T  31300067 cggggttcgaacctcggtacctccacttatgtgtgtgtgagtttataataactttgtcatttcgtctatc 31299998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 40857413 - 40857345
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||||   | ||||||||||||| || ||||| |||| |||||||||    
T  40857413 gatcggggttcgaaccccggtacctccact---tatgtgtgaatttataataactttgtcatttcgtctatc 40857345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 46275006 - 46275075
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||||| |||||| |||| ||||| ||| ||||  ||| |||||||||    
T  46275006 cggggttcgaatcccggtacctccacttgtgtgtgcgtgagtttataatggctttgccatttcgtctatc 46275075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4674379 - 4674312
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  4674379 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4674312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 6327269 - 6327336
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||| ||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  6327269 cggggttcgaaccccggtacatccactt-gtgtgtgtgagtttataatgactttgccatttcgtctatc 6327336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 16862450 - 16862513
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| ||||  |||||||||| |||||||||| |||||||||||||| |||| ||| |||||    
T  16862450 gttcgaaccccggcacctccactt-gtgtgtgtgagtttatgatgactttgtcatttcgcctatc 16862513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 28649432 - 28649369
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| | || ||||||||||| |||||||||| ||||| ||||||||||||| ||| |||||    
T  28649432 gttcgaacctcggtacctccactt-gtgtgtgtgagtttataatgactttatcatttcgactatc 28649369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 40012059 - 40011992
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  40012059 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 40011992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 40656178 - 40656111
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  40656178 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 40656111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 45236988 - 45237055
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||| ||||| ||||| ||| ||||  ||| |||||||||    
T  45236988 cggggttcgaaccccgatacctccac-ttgtgtatgtgagtttataatggctttgccatttcgtctatc 45237055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 46734189 - 46734134
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||    
T  46734189 gatcggggttcgaaccccgttacctccac-ttgtgtgtgtgagtttataatggcttt 46734134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 13849357 - 13849467
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatagc-cagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    |||||||||||| |||||||||||||||||| |||||| |||  ||||||     ||||||||||||| ||||| |||||||||||||||||| || |||    
T  13849357 cataagtcctagctcaactgacaaaaatgtcgaaattgttaggtcagacgtcttgatcggggttcgaaccccgacacctccactttgtgtgtgggagttt 13849456  T
Q  227 atgatgacttt 237  Q
     | ||||||||    
T  13849457 gttatgacttt 13849467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 46107390 - 46107500
Alignment:
Q  129 gtcccataagtcctaggtcaactgacaaaaatgtcaaaattgatagc-cagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtga 222  Q
    ||||||| |||||||| |||||||| |||||||||||||||  |||  ||||||     |||| | |||||| ||||||||||||||||| |||||||||    
T  46107390 gtcccatcagtcctagttcaactgataaaaatgtcaaaattattagatcagacgtcatgatcgagattcgaaccccgatacctccactttatgtgtgtga 46107489  T
Q  223 atttatgatga 233  Q
    |||||||||||    
T  46107490 atttatgatga 46107500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 51281528 - 51281593
Alignment:
Q  188 gttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||| |||| |||||||||    
T  51281528 gttcgaaccccgatacctccacttgtgtgtgtgtgaatttataatgactttgtcatttcgtctatc 51281593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 37759488 - 37759555
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| | |||| |||||||||||||||||||| ||||||||| |||| ||||||| ||||||    
T  37759488 ggggttcgaacctcgattcctccactttgtgtgtgtgagtttatgatggctttgtcatctcttctatc 37759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 37340175 - 37340110
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||| | || || ||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  37340175 ggttcgaaccacggtatctccactttgtgtgtgtgagtttatgatgattttgtcatctcgtctatc 37340110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 3084315 - 3084260
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| || |||||    
T  3084315 gatcggggttcgaatcccgatacctccac-ttgtgtgtgtgagtttataataacttt 3084260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 9696365 - 9696297
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtct 249  Q
    |||||||||||||| | || |||||||||||| ||||||| | |||||||||| |||||| ||||||||    
T  9696365 gatcggggttcgaacctcggtacctccactttatgtgtgtaagtttatgatgaatttatcttctcgtct 9696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 32057782 - 32057726
Alignment:
Q  196 cccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| |||||||||||||||||||||| |||||||||  ||| ||||||||||||||    
T  32057782 cccggtacctccactttgtgtgtgtgagtttatgatggttttgtcatctcgtctatc 32057726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 47462106 - 47462039
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  47462106 cggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 47462039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 33530294 - 33530345
Alignment:
Q  201 tacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| ||||||||||||||| |||||||| ||||| ||||||||||||||    
T  33530294 tacctctactttgtgtgtgtgagtttatgataactttttcatctcgtctatc 33530345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 52772171 - 52772241
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||||||||| ||| |||||||||| | |||||  ||||||| |||| |||||||||    
T  52772171 gatcggggttcgaatcccgataccttcac-ttgtgtgtgtaagtttatattgactttgtcatttcgtctatc 52772241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 35828332 - 35828401
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||| ||| ||||  ||| |||||||||    
T  35828332 cggggttcgaaccccggtacctccacttgtgtgtgtgtgaatttataatggctttgccatttcgtctatc 35828401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7413150 - 7413217
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| || | ||||||| ||||| |||||||| |||| |||||||||    
T  7413150 cggggttcgaatcccggtacctccac-ttatatgtgtgagtttataatgactttgtcatttcgtctatc 7413217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7459230 - 7459297
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| ||||||||| || | ||||||| ||||| |||||||| |||| |||||||||    
T  7459230 cggggttcgaatcccggtacctccac-ttatatgtgtgagtttataatgactttgtcatttcgtctatc 7459297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 31375171 - 31375238
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||| | ||||| |||||||| |||| |||||||||    
T  31375171 cggggttcgaaccccggtacctccac-ttgtgtgtgtaagtttataatgactttgtcatttcgtctatc 31375238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 38944448 - 38944384
Alignment:
Q  187 ggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    |||||||| ||| ||||||||||||| ||| ||||| |||||||||  ||| |||||||||||||    
T  38944448 ggttcgaaccccaatacctccactttatgtatgtgagtttatgatggttttgtcatctcgtctat 38944384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 1083563 - 1083633
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||||||||||||| |||||||||| | ||||| ||| ||||  ||| |||||||||    
T  1083563 gatcggggttcgaaccccgatacctccac-ttgtgtgtgtaagtttataatggctttgccatttcgtctatc 1083633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 24550868 - 24550938
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  24550868 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 24550938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 25586400 - 25586330
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| || ||||||||| ||||| ||| |||| |||| |||||||||    
T  25586400 gatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgtcatttcgtctatc 25586330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 30044657 - 30044587
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  30044657 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 30044587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 32233671 - 32233737
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||| ||| |||| ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  32233671 ggggtttgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 32233737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 37166193 - 37166263
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  37166193 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 37166263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 42856618 - 42856688
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||| ||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  42856618 gatcggggttcgaattccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 42856688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 28758439 - 28758488
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||| |||  |||||||||||||||||||||| ||||| ||||||||    
T  28758439 gttcgaaccccagtacctccactttgtgtgtgtgagtttataatgacttt 28758488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 40379716 - 40379769
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||||| || | ||||||||||||| ||||||||| |||||||| |||||    
T  40379716 cggggttcgactctcaatacctccactttatgtgtgtgagtttatgataacttt 40379769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 46343330 - 46343455
Alignment:
Q  133 cataagtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagacg-----atcggggttcgaatcccgatacctccactttgtgtgtgtgaattt 226  Q
    |||||||||||| ||||||||||||| || | |||||| ||| || ||||     | ||||||||||| ||   |||||||| |||  |||||||| |||    
T  46343330 cataagtcctagctcaactgacaaaagtgccgaaattgttaggccggacgtcatgaccggggttcgaaccctagtacctccattttacgtgtgtgagttt 46343429  T
Q  227 atgatgactttatcatctcgtctatc 252  Q
    ||||||||||| ||||||| ||||||    
T  46343430 atgatgactttgtcatctcttctatc 46343455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 50981781 - 50981732
Alignment:
Q  203 cctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||||||| ||||||||| ||||  |||||| ||||||    
T  50981781 cctccactttgtgtgtgtgagtttatgatggctttgacatctcttctatc 50981732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 54097006 - 54096946
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtct 249  Q
    ||||||| |||| ||||||||||| |||||||||| ||||| |||||||| |||| ||||||    
T  54097006 gttcgaaccccggtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtct 54096946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 2942508 - 2942453
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    ||||||| |||||| |||||||||||||| ||| | |||||| ||||||||||||||    
T  2942508 gatcgggattcgaaccccgatacctccac-ttgcgcgtgtgagtttatgatgacttt 2942453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 5333276 - 5333209
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  5333276 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 5333209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 6487904 - 6487971
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  6487904 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 6487971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7512825 - 7512892
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  7512825 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 7512892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 16477007 - 16476940
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  16477007 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 16476940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 16971752 - 16971685
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| || ||||| ||||  ||||||||    
T  16971752 cggggttcgaaccccgctacctccac-ttgtgtgtgtgagtttataataactttgtcattccgtctatc 16971685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 24712146 - 24712213
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  24712146 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 24712213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 34684260 - 34684327
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  34684260 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34684327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 39997843 - 39997776
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| | || ||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  39997843 cggggttcgaacctcggtacctccactt-gtgtgtgtgagtttataatgactttgccatttcgtctatc 39997776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 43588825 - 43588880
Alignment:
Q  186 gggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcat 242  Q
    ||||||||| ||||||| || ||||| |||||||||||||||  |||||||||||||    
T  43588825 gggttcgaaccccgatatcttcactt-gtgtgtgtgaatttaaaatgactttatcat 43588880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 51675737 - 51675670
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||  ||| ||||||||||| |||||||||| ||||| ||| |||| |||| |||||||||    
T  51675737 cggggttcgaactccggtacctccactt-gtgtgtgtgagtttataatggctttgtcatttcgtctatc 51675670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 52556456 - 52556402
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgacttt 237  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||| ||| ||||    
T  52556456 gatcggggttcgaaccccgat-cctccactt-gtgtgtgtgaatttataatggcttt 52556402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 2747542 - 2747661
Alignment:
Q  124 aaatcgtcccataagtcctaggtcaactgacaaaaatgtcaaaattgata-gccagac-----gatcggggttcgaatcccgatacctccactttgtgtg 217  Q
    |||| |||||||||||||||| ||  ||||||||||||||||||||| || |||| ||     ||||||| ||||||||| ||||| |||| ||| ||||    
T  2747542 aaattgtcccataagtcctagctcgcctgacaaaaatgtcaaaattgttaggccaaacgtcatgatcgggattcgaatcctgatacttccattttatgtg 2747641  T
Q  218 tgtgaatttatgatgacttt 237  Q
    ||||| |||| |||||||||    
T  2747642 tgtgagtttacgatgacttt 2747661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 9727499 - 9727620
Alignment:
Q  136 aagtcctaggtcaactgacaaaaatgtcaaaattgatagccag------acgatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatg 229  Q
    ||||||||| |||||||||||||||||| |||||| ||| | |      | |||||||||||||| |||  ||||||||||| |||||||||| |||||     
T  9727499 aagtcctagttcaactgacaaaaatgtcgaaattgttaggccggataccatgatcggggttcgaacccctgtacctccactt-gtgtgtgtgagtttata 9727597  T
Q  230 atgactttatcatctcgtctatc 252  Q
    |||||||| |||| |||||||||    
T  9727598 atgactttgtcatttcgtctatc 9727620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 13032135 - 13032086
Alignment:
Q  202 acctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  13032135 acctccactttatgtgtgtgaatttatgatgattttatcatttcgtctat 13032086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 31242060 - 31241994
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||  ||| |||||||||    
T  31242060 cggggttcgaatcccgacacctccac--tgtgtgtgtgagtttatgatgactttgccatttcgtctatc 31241994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 232
Target Start/End: Original strand, 9297761 - 9297863
Alignment:
Q  136 aagtcctaggtcaactgacaaaaatgtcaaaattgatag-ccagacg-----atcggggtt-cgaatcccgatacctccactttgtgtgtgtgaatttat 228  Q
    ||||||||| |||||||||||||||||| |||||| ||| |||||||     || |||||| |||| |||| |||||||||||||||||||||| |||||    
T  9297761 aagtcctagttcaactgacaaaaatgtcgaaattgttaggccagacgtcatgattggggtttcgaa-cccggtacctccactttgtgtgtgtgagtttat 9297859  T
Q  229 gatg 232  Q
    ||||    
T  9297860 gatg 9297863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 2314669 - 2314600
Alignment:
Q  184 cggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||||| ||||||||||| ||||| ||||||||  ||| |||||||||    
T  2314669 cggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatgactttgccatttcgtctatc 2314600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 5603517 - 5603450
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| || ||||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||    
T  5603517 cggggttcgaaccctgatacctccactt-gtgtgtgtgagtttataatgactttgccatttcgtctatc 5603450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 22721306 - 22721378
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||  || ||||| |||||||||| ||||||||||| ||||| |||||||| |||| |||||||||    
T  22721306 gatcggggttttaaccccgacacctccacttgtgtgtgtgtgagtttataatgactttgtcatttcgtctatc 22721378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 30614981 - 30614918
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctat 251  Q
    ||||||||||| ||||||||||||||   ||||||||| ||||| |||||||| |||| ||||||||    
T  30614981 ggggttcgaattccgatacctccact---tgtgtgtgagtttataatgactttgtcatttcgtctat 30614918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 1855061 - 1855131
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  1855061 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 1855131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 5626129 - 5626063
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||| ||| ||||| ||| |||||||||    
T  5626129 ggggttcgaaccccggtacctccactt-gtgtgtgtgagtttataatggctttaccatttcgtctatc 5626063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 5660454 - 5660524
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  5660454 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 5660524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 9949224 - 9949178
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttat 228  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  9949224 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgaatttat 9949178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 19225821 - 19225892
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||| ||||| |||||| ||||| | |||||| | ||||||| |||||||||| |||| |||||||||||||    
T  19225821 gatcagggtttgaatccggatacattcactttatatgtgtgagtttatgatgattttaccatctcgtctatc 19225892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 32643798 - 32643727
Alignment:
Q  184 cggggttcgaatcccgatacctccactt---tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||||| |||||||||||   ||||||| ||| ||||| ||| ||||| ||| |||||||||    
T  32643798 cggggttcgaatcccggtacctccacttgtgtgtgtgtctgagtttataatggctttaccatttcgtctatc 32643727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 2959051 - 2959118
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  2959051 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 2959118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 8329628 - 8329561
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  8329628 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8329561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 8448212 - 8448145
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  8448212 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 8457016 - 8456949
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  8457016 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8456949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 8939684 - 8939751
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  8939684 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8939751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 21513131 - 21513199
Alignment:
Q  185 ggggttcgaatcccgatacctccactt-tgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||| ||| ||||  ||| |||||||||    
T  21513131 ggggttcgaaccccagtacctccacttgtgtgtgtgtgaatttataatggctttgccatttcgtctatc 21513199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 31057890 - 31057957
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| |||  ||| |||| |||||||||    
T  31057890 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggttttgtcatttcgtctatc 31057957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 7827 - 7760
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  7827 cggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 7760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 3868 - 3797
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||||||||||| ||||| || ||| ||||||||| ||||| |||  ||| |||| |||||||||    
T  3868 gatcggggttcgaatcccggtaccttcattttatgtgtgtgagtttataatggttttgtcatttcgtctatc 3797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 195800 - 195866
Alignment:
Q  185 ggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||| |||| | ||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  195800 ggggttcgaaccccggttcctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 195866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 90624 - 90694
Alignment:
Q  181 gatcggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  90624 gatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 90694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 22984 - 23046
Alignment:
Q  190 tcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||| |||| |||||||||||||||||| ||| |||||||||  ||| ||||| ||||||||    
T  22984 tcgaaccccggtacctccactttgtgtgtttgagtttatgatggttttgtcatcccgtctatc 23046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 403 - 470
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  403 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1311 - 1244
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  1311 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 1244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 64345 - 64408
Alignment:
Q  188 gttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||| |||  ||||||||||| |||||||||| ||||| |||||||| |||| |||||||||    
T  64345 gttcgaaccccagtacctccactt-gtgtgtgtgagtttataatgactttgtcatttcgtctatc 64408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 39383 - 39316
Alignment:
Q  184 cggggttcgaatcccgatacctccactttgtgtgtgtgaatttatgatgactttatcatctcgtctatc 252  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||| ||||  ||| |||||||||    
T  39383 cggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggcttttccatttcgtctatc 39316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 592 times since January 2019
Visitors: 5845