View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0778_high_65 (Length: 251)
Name: NF0778_high_65
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0778_high_65 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 41698061 - 41697818
Alignment:
| Q |
8 |
agattatacttattaatttcaagaaggaaattcttgcatttgttccgaaagaaggattgaaaagtttagaagatgattcctcaaacgagtgttctacagt |
107 |
Q |
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| T |
41698061 |
agattttacttattaatttcaagaaggaaattcttgcatttgttccgaaagaaggattgaaaagtttagaagatgattcctcaaatgagtgttctacagt |
41697962 |
T |
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| Q |
108 |
tcttgttgttgatgaatctatggcaattgcagcacacaatgaggatgcaaatgttgttcttgttggtcacacgtaagcgtttgtattcatattcatattt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41697961 |
tcttgttgttgatgaatctatggcaattgcagcacacaatgaggatgcaaatgttgttcttgttggtcacacgtaagcgtttgtattcatattcatattt |
41697862 |
T |
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| Q |
208 |
tgttctcgaattcaaataaaattgctttataagtattctttcct |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41697861 |
tgttctcgaattcaaataaaattgctttataagtattctttcct |
41697818 |
T |
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