View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0778_low_106 (Length: 255)
Name: NF0778_low_106
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0778_low_106 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34330792 - 34330567
Alignment:
| Q |
1 |
atttcaatttcatctgaactcagcttttctagttacaagtatactaaactaatataacatcactgaaagaaagaaagnnnnnnnnngtgcatgaaacaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
34330792 |
atttcaatttcatctgaactcagcttttctagttacaagtatactaaactaatataacatcactgaaagaaagaaagaaaaaaacagtgcatgaaacaag |
34330693 |
T |
|
| Q |
101 |
atatggaaagaacaacaacaatgaaaacctttgattgtaacctgcctccaaaatcaccaaccatcttaagagatatagatgcatctttctcatcctatct |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
34330692 |
atatggaaagaacaacaacaataaaaacctttgattgtaacctgcctccaaaatcaccaaccatcttaagagatatagatgcatctttctcatcctatct |
34330593 |
T |
|
| Q |
201 |
cacaccccaaaagccaaataatcata |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
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|
| T |
34330592 |
cacaccccaaaagccaaataatcata |
34330567 |
T |
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